Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0008942

Physical Location & Seq

Genomic Coordinates Forward (+)

332429 .. 334660

Gene Structure 2232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g00580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGAGAGGATTGTGTGAGAACGGAATTATTTTGCTGGCGGACTTGCATTGGAGGAACCATTTTATCACAAACACAACACGAAAACACGTGGTCGTCGAAACACTCTTCTTCCTCTGCCGCTATCTTTGCCGCGAAAGCAGTCTGCTTTCACGGATGAATTGCAGCAGCTCTCGTACCTTCTCCCATGGTGCCGTAGCTTCGTTTCGCGGCAAAGGAATGGACTTTGTCTCTCCCAAATTCGTGACCTTTGGCGCCTCCTTCCCTGCAAAATCAGAATTCCTGAATTCCTACATCCACCCGGCTCTCACTTCCCTCGATTCTTTCCGATTTCAGGGTGGCAATGTACTCCAGGTTTCAGTGAAGTCGAGAAGTTCGAAATCGTATGCATTGGTGGTGAGGAGTGATCATCGCTATCCCCAGAACTCCGACTTTCTGAAGCACTATTCGAAGAAGGAGAAGAAGCCGTATCCGGTGCCCATTGTGGAGCTGAGGCGGGCAGCAAGGGAGAGGCTGAAGAGCAACAAGGGCAAGCCTAGAACGCCGGTTCCACCTCCCAAAAATGGCTTGCTTGTCAAGACCCTTGTGCCCGTTGCATATGATGTGTACGATGCGAGAATTACATTGATCAACAATTTGAAGAGGCTTTTGAAGGTGGTTCCTGTGCAGGCTTGCAGGTTCTGTAATGAAATTCACGTGGGGCCTGTGGGGCATCCATTCAAATCATGCAAAGGTGCAAATGCTAACATTCGTAAGGGTGTTCATGAGTGGATACCAAATGTGACCGTTGATGACATATTCTTACCGGTTGAAGCTTTCCACCTCTACGATCGGCTTGGAAGACGCATTCCTCATGAGGAGAGATTCTCAACTCCTAGACTTCCAGCATTAGTTGAGCTCTGCATCCAGGCTGGGGTCGATATCCCGGAATATCCCACTAAAAGGAGAAGAAAGCCAATCGTCCGAATTTCAAAGAGTGAATTTGTTGATGCAGATGAAAGTGAGCTACCAGACCTGGACAATGAAGGACCCAGGAGACCAGTTTTGACTGAAATACTAGATTCGGAGGTAATAGCTCCTTCTGATGAAGAAGAGACAACTTTGCTTGCTGAGGAAACACTACGAGCATGGGAGCAGATGAGGAGAGGAGCCAAGAGGCTGATGAAGATGTATCTGGTGAGGGTTTGCGGGTATTGCCCAGAGGTGCATGTAGGTCCTAGCGGGCACAAGGCTCAGAACTGTGGGGCCTTCAAACACCAACAACGAAATGGGCAGCATGGCTGGCAGGCAGCTGTGCTCAATGACTTGATACCACCAAGATATGTGTGGCATGTTCCAGATGTGAATGGACCGCCATTGGAGCGGGAGCTCAGGAACTTCTATGGGCAAGCCCCAGCGGTTGTCGAAATGTGCATTCAGGCGGGTGCTGCTGTGCCAGAAGAATACAGACCAACCATGAGGTTGGATGTCGGGATTCCCTCCACTATTAAAGAAGCTGAAATGGTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

APO_RNA-bind

Protein Analysis

503

Amino Acids

56.92

Weight (kDa)

9.38

Isoelectric Point (pI)

46.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APO_RNA-bind	PF05634	133 - 329	4.8e-88	APO RNA-binding
APO_RNA-bind	PF05634	368 - 479	5.6e-25	APO RNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008942)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57930 AT5G57930
fragaria_vesca	FvH4_2g26040 FvH4_2g26040 FvH4_2g26040
malus_domestica	MD02G1006800.v1.1 MD15G1144200.v1.1 MD15G1152000.v1.1
prunus_persica	Prupe.7G263600_v2.0.a1
pyrus_communis	pycom02g00580 pycom15g13580
rosa_chinensis	RchiOBHm_Chr6g0294401
rosa_laevigata	RLG00000011873
rosa_multiflora	Rmu_ssc0000327.1_g000001
rosa_roxburghii	Rroxscaffold_7G00173400
rosa_rugosa	Rorug06G0244300 Rorug06G0244400
rosa_samantha	Rh6AG356800 Rh6BG363500 Rh6CG370800 Rh6DG357500
rosa_wichuraiana	Rw6G031100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	663
AccB1I	GGYRCC	3 cut(s)	188, 251, 472
AccBSI	CCGCTC	1 cut(s)	1360
AccII	CGCG	2 cut(s)	132, 207
AcsI	RAATTY	6 cut(s)	236, 275, 283, 687, 963, 977
AcuI	CTGAAG	2 cut(s)	455, 533
AcvI	CACGTG	2 cut(s)	88, 694
AcyI	GRCGYC	1 cut(s)	252
AfaI	GTAC	3 cut(s)	175, 345, 605
AfiI	CCNNNNNNNGG	4 cut(s)	331, 560, 910, 939
AflIII	ACRYGT	1 cut(s)	85
AgeI	ACCGGT	1 cut(s)	802
AgsI	TTSAA	6 cut(s)	637, 649, 718, 809, 969, 1249
AjnI	CCWGG	4 cut(s)	348, 903, 1011, 1028
AloI	GAACNNNNNNTCC	2 cut(s)	529, 561
Alw21I	GWGCWC	3 cut(s)	897, 1296, 1368
Alw26I	GTCTC	3 cut(s)	232, 1027, 1085
AlwNI	CAGNNNCTG	1 cut(s)	678
AoxI	GGCC	2 cut(s)	698, 1242
ApeKI	GCWGC	6 cut(s)	162, 165, 497, 1270, 1286, 1424
ApoI	RAATTY	6 cut(s)	236, 275, 283, 687, 963, 977
AsiGI	ACCGGT	1 cut(s)	802
AspLEI	GCGC	1 cut(s)	254
AspS9I	GGNCC	5 cut(s)	698, 1025, 1211, 1242, 1346
AsuC2I	CCSGG	2 cut(s)	299, 923
AsuHPI	GGTGA	2 cut(s)	406, 1186
AsuII	TTCGAA	2 cut(s)	374, 446
AvaII	GGWCC	3 cut(s)	1025, 1211, 1346
BaeGI	GKGCMC	3 cut(s)	477, 588, 1224
BanI	GGYRCC	3 cut(s)	188, 251, 472
BanII	GRGCYC	2 cut(s)	897, 1368
BbrPI	CACGTG	2 cut(s)	88, 694
BbsI	GAAGAC	1 cut(s)	844
Bbv12I	GWGCWC	3 cut(s)	897, 1296, 1368
BbvCI	CCTCAGC	2 cut(s)	488, 1107
BbvI	GCAGC	6 cut(s)	174, 177, 509, 1282, 1298, 1411
BceAI	ACGGC	2 cut(s)	176, 448
BciT130I	CCWGG	4 cut(s)	350, 905, 1013, 1030
BciVI	GTATCC	2 cut(s)	477, 762
BclI	TGATCA	2 cut(s)	403, 624
BcnI	CCSGG	2 cut(s)	299, 923
BcoDI	GTCTC	3 cut(s)	232, 1027, 1085
BfaI	CTAG	4 cut(s)	534, 873, 1055, 1215
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	1 cut(s)	663
BfuI	GTATCC	2 cut(s)	477, 762
BglI	GCCNNNNNGGC	1 cut(s)	706
BisI	GCNGC	9 cut(s)	118, 130, 163, 166, 208, 498, 1271, 1287, 1425
BlsI	GCNGC	9 cut(s)	119, 131, 164, 167, 209, 499, 1272, 1288, 1426
Bme1390I	CCNGG	6 cut(s)	299, 350, 905, 923, 1013, 1030
Bme18I	GGWCC	3 cut(s)	1025, 1211, 1346
BmgT120I	GGNCC	5 cut(s)	698, 1025, 1211, 1242, 1346
BmrFI	CCNGG	6 cut(s)	299, 350, 905, 923, 1013, 1030
BmsI	GCATC	4 cut(s)	598, 718, 909, 976
BpiI	GAAGAC	1 cut(s)	844
BplI	GAGNNNNNCTC	2 cut(s)	848, 880
BpmI	CTGGAG	1 cut(s)	332
Bpu10I	CCTNAGC	3 cut(s)	488, 1107, 1367
Bpu14I	TTCGAA	2 cut(s)	374, 446
BpuMI	CCSGG	2 cut(s)	299, 923
BsaAI	YACGTR	2 cut(s)	88, 694
BsaHI	GRCGYC	1 cut(s)	252
BsaI	GGTCTC	1 cut(s)	1027
BsaJI	CCNNGG	2 cut(s)	184, 1028
BsaWI	WCCGGW	2 cut(s)	469, 802
Bsc4I	CCNNNNNNNGG	4 cut(s)	331, 560, 910, 939
Bse118I	RCCGGY	2 cut(s)	541, 802
Bse1I	ACTGG	1 cut(s)	1037
Bse3DI	GCAATG	1 cut(s)	346
BseBI	CCWGG	4 cut(s)	350, 905, 1013, 1030
BseDI	CCNNGG	2 cut(s)	184, 1028
BseGI	GGATG	5 cut(s)	159, 291, 709, 900, 1468
BseLI	CCNNNNNNNGG	4 cut(s)	331, 560, 910, 939
BseMI	GCAATG	1 cut(s)	346
BseMII	CTCAG	4 cut(s)	479, 1098, 1244, 1381
BseNI	ACTGG	1 cut(s)	1037
BseRI	GAGGAG	4 cut(s)	412, 869, 1153, 1158
BseSI	GKGCMC	3 cut(s)	477, 588, 1224
BseXI	GCAGC	6 cut(s)	174, 177, 509, 1282, 1298, 1411
BseYI	CCCAGC	2 cut(s)	908, 1390
BsgI	GTGCAG	1 cut(s)	683
Bsh1236I	CGCG	2 cut(s)	132, 207
Bsh1285I	CGRYCG	1 cut(s)	829
BshFI	GGCC	2 cut(s)	700, 1244
BshNI	GGYRCC	3 cut(s)	188, 251, 472
BshTI	ACCGGT	1 cut(s)	802
BsiEI	CGRYCG	1 cut(s)	829
BsiHKAI	GWGCWC	3 cut(s)	897, 1296, 1368
BsiSI	CCGG	5 cut(s)	299, 470, 542, 803, 923
BslI	CCNNNNNNNGG	4 cut(s)	331, 560, 910, 939
BsmAI	GTCTC	3 cut(s)	232, 1027, 1085
BsmI	GAATGC	2 cut(s)	843, 1410
BsnI	GGCC	2 cut(s)	700, 1244
Bso31I	GGTCTC	1 cut(s)	1027
Bsp119I	TTCGAA	2 cut(s)	374, 446
Bsp1286I	GDGCHC	6 cut(s)	477, 588, 897, 1224, 1296, 1368
Bsp143I	GATC	3 cut(s)	403, 624, 826
Bsp19I	CCATGG	1 cut(s)	184
BspANI	GGCC	2 cut(s)	700, 1244
BspCNI	CTCAG	4 cut(s)	480, 1099, 1243, 1380
BspFNI	CGCG	2 cut(s)	132, 207
BspHI	TCATGA	2 cut(s)	760, 850
BspMI	ACCTGC	1 cut(s)	663
BspQI	GCTCTTC	1 cut(s)	509
BspT104I	TTCGAA	2 cut(s)	374, 446
BspT107I	GGYRCC	3 cut(s)	188, 251, 472
BspTNI	GGTCTC	1 cut(s)	1027
BsrBI	CCGCTC	1 cut(s)	1360
BsrDI	GCAATG	1 cut(s)	346
BsrFI	RCCGGY	2 cut(s)	541, 802
BsrI	ACTGG	1 cut(s)	1037
BssAI	RCCGGY	2 cut(s)	541, 802
BssECI	CCNNGG	2 cut(s)	184, 1028
BssMI	GATC	3 cut(s)	403, 624, 826
BssNI	GRCGYC	1 cut(s)	252
BssT1I	CCWWGG	1 cut(s)	184
Bst2UI	CCWGG	4 cut(s)	350, 905, 1013, 1030
Bst4CI	ACNGT	2 cut(s)	784, 1238
Bst6I	CTCTTC	4 cut(s)	110, 509, 632, 1083
BstACI	GRCGYC	1 cut(s)	252
BstBAI	YACGTR	2 cut(s)	88, 694
BstBI	TTCGAA	2 cut(s)	374, 446
BstDEI	CTNAG	4 cut(s)	488, 1107, 1230, 1367
BstDSI	CCRYGG	1 cut(s)	184
BstF5I	GGATG	5 cut(s)	159, 291, 709, 900, 1468
BstFNI	CGCG	2 cut(s)	132, 207
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	1 cut(s)	254
BstKTI	GATC	3 cut(s)	406, 627, 829
BstMAI	GTCTC	3 cut(s)	232, 1027, 1085
BstMBI	GATC	3 cut(s)	403, 624, 826
BstMCI	CGRYCG	1 cut(s)	829
BstMWI	GCNNNNNNNGC	9 cut(s)	126, 135, 525, 538, 706, 1191, 1279, 1357, 1424
BstNI	CCWGG	4 cut(s)	350, 905, 1013, 1030
BstNSI	RCATGY	2 cut(s)	1208, 1331
BstSCI	CCNGG	6 cut(s)	297, 348, 903, 921, 1011, 1028
BstSLI	GKGCMC	3 cut(s)	477, 588, 1224
BstUI	CGCG	2 cut(s)	132, 207
BstV1I	GCAGC	6 cut(s)	174, 177, 509, 1282, 1298, 1411
BstV2I	GAAGAC	1 cut(s)	844
BstXI	CCANNNNNNTGG	1 cut(s)	1459
BsuI	GTATCC	2 cut(s)	477, 762
BsuRI	GGCC	2 cut(s)	700, 1244
BtgI	CCRYGG	1 cut(s)	184
BtgZI	GCGATG	1 cut(s)	392
BtsCI	GGATG	5 cut(s)	159, 291, 709, 900, 1468
BtsIMutI	CAGTG	1 cut(s)	363
BveI	ACCTGC	1 cut(s)	663
CaiI	CAGNNNCTG	1 cut(s)	678
CciI	TCATGA	2 cut(s)	760, 850
CfoI	GCGC	1 cut(s)	254
Cfr10I	RCCGGY	2 cut(s)	541, 802
Cfr13I	GGNCC	5 cut(s)	698, 1025, 1211, 1242, 1346
CseI	GACGC	1 cut(s)	849
Csp6I	GTAC	3 cut(s)	174, 344, 604
CspAI	ACCGGT	1 cut(s)	802
CviAII	CATG	9 cut(s)	185, 723, 761, 851, 1125, 1205, 1274, 1328, 1453
CviQI	GTAC	3 cut(s)	174, 344, 604
DdeI	CTNAG	4 cut(s)	488, 1107, 1230, 1367
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	3 cut(s)	405, 626, 828
DpnII	GATC	3 cut(s)	403, 624, 826
Eam1104I	CTCTTC	4 cut(s)	110, 509, 632, 1083
EarI	CTCTTC	4 cut(s)	110, 509, 632, 1083
EciI	GGCGGA	1 cut(s)	53
Ecl136II	GAGCTC	2 cut(s)	895, 1366
Eco130I	CCWWGG	1 cut(s)	184
Eco24I	GRGCYC	2 cut(s)	897, 1368
Eco31I	GGTCTC	1 cut(s)	1027
Eco32I	GATATC	1 cut(s)	919
Eco47I	GGWCC	3 cut(s)	1025, 1211, 1346
Eco53kI	GAGCTC	2 cut(s)	895, 1366
Eco57I	CTGAAG	2 cut(s)	455, 533
Eco72I	CACGTG	2 cut(s)	88, 694
EcoICRI	GAGCTC	2 cut(s)	895, 1366
EcoO109I	RGGNCCY	4 cut(s)	698, 1025, 1211, 1242
EcoRI	GAATTC	2 cut(s)	275, 283
EcoRII	CCWGG	4 cut(s)	348, 903, 1011, 1028
EcoRV	GATATC	1 cut(s)	919
EcoT14I	CCWWGG	1 cut(s)	184
EcoT22I	ATGCAT	1 cut(s)	388
EcoT38I	GRGCYC	2 cut(s)	897, 1368
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	1 cut(s)	184
FaeI	CATG	9 cut(s)	188, 726, 764, 854, 1128, 1208, 1277, 1331, 1456
FatI	CATG	9 cut(s)	184, 722, 760, 850, 1124, 1204, 1273, 1327, 1452
FauI	CCCGC	5 cut(s)	486, 1178, 1211, 1353, 1411
FauNDI	CATATG	1 cut(s)	595
FbaI	TGATCA	2 cut(s)	403, 624
Fnu4HI	GCNGC	9 cut(s)	118, 130, 163, 166, 208, 498, 1271, 1287, 1425
FokI	GGATG	5 cut(s)	166, 278, 696, 887, 1475
FriOI	GRGCYC	2 cut(s)	897, 1368
Fsp4HI	GCNGC	9 cut(s)	118, 130, 163, 166, 208, 498, 1271, 1287, 1425
FspBI	CTAG	4 cut(s)	534, 873, 1055, 1215
GlaI	GCGC	1 cut(s)	253
GluI	GCNGC	9 cut(s)	118, 130, 163, 166, 208, 498, 1271, 1287, 1425
GsaI	CCCAGC	2 cut(s)	912, 1394
GsuI	CTGGAG	1 cut(s)	332
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	2 cut(s)	700, 1244
HapII	CCGG	5 cut(s)	299, 470, 542, 803, 923
HgaI	GACGC	1 cut(s)	849
HhaI	GCGC	1 cut(s)	254
Hin1I	GRCGYC	1 cut(s)	252
Hin1II	CATG	9 cut(s)	188, 726, 764, 854, 1128, 1208, 1277, 1331, 1456
Hin6I	GCGC	1 cut(s)	252
HinP1I	GCGC	1 cut(s)	252
HindIII	AAGCTT	1 cut(s)	810
HinfI	GANTC	4 cut(s)	317, 861, 1058, 1471
HpaII	CCGG	5 cut(s)	299, 470, 542, 803, 923
HphI	GGTGA	2 cut(s)	406, 1186
Hpy166II	GTNNAC	1 cut(s)	604
Hpy188I	TCNGA	8 cut(s)	274, 326, 427, 435, 962, 1063, 1081, 1233
Hpy188III	TCNNGA	9 cut(s)	241, 280, 366, 574, 761, 851, 1334, 1369, 1468
Hpy8I	GTNNAC	1 cut(s)	604
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	7 cut(s)	187, 268, 445, 643, 1016, 1086, 1255
HpyCH4III	ACNGT	2 cut(s)	784, 1238
HpyCH4IV	ACGT	2 cut(s)	87, 693
HpyF10VI	GCNNNNNNNGC	9 cut(s)	126, 135, 525, 538, 706, 1191, 1279, 1357, 1424
HpyF3I	CTNAG	4 cut(s)	488, 1107, 1230, 1367
HpySE526I	ACGT	2 cut(s)	87, 693
Hsp92I	GRCGYC	1 cut(s)	252
Hsp92II	CATG	9 cut(s)	188, 726, 764, 854, 1128, 1208, 1277, 1331, 1456
HspAI	GCGC	1 cut(s)	252
KasI	GGCGCC	1 cut(s)	251
Ksp22I	TGATCA	2 cut(s)	403, 624
Kzo9I	GATC	3 cut(s)	403, 624, 826
LguI	GCTCTTC	1 cut(s)	509
LmnI	GCTCC	6 cut(s)	484, 1078, 1129, 1145, 1357, 1363
Lsp1109I	GCAGC	6 cut(s)	174, 177, 509, 1282, 1298, 1411
LweI	GCATC	4 cut(s)	598, 718, 909, 976
MaeI	CTAG	4 cut(s)	534, 873, 1055, 1215
MaeII	ACGT	2 cut(s)	87, 693
MaeIII	GTNAC	2 cut(s)	241, 778
MalI	GATC	3 cut(s)	405, 626, 828
MbiI	CCGCTC	1 cut(s)	1360
MboI	GATC	3 cut(s)	403, 624, 826
MhlI	GDGCHC	6 cut(s)	477, 588, 897, 1224, 1296, 1368
Mly113I	GGCGCC	1 cut(s)	252
MmeI	TCCRAC	2 cut(s)	450, 1440
Mph1103I	ATGCAT	1 cut(s)	388
MseI	TTAA	1 cut(s)	1485
MspA1I	CMGCKG	2 cut(s)	1289, 1394
MspI	CCGG	5 cut(s)	299, 470, 542, 803, 923
MspR9I	CCNGG	6 cut(s)	299, 350, 905, 923, 1013, 1030
Mva1269I	GAATGC	2 cut(s)	843, 1410
MvaI	CCWGG	4 cut(s)	350, 905, 1013, 1030
MvnI	CGCG	2 cut(s)	132, 207
MwoI	GCNNNNNNNGC	9 cut(s)	126, 135, 525, 538, 706, 1191, 1279, 1357, 1424
NarI	GGCGCC	1 cut(s)	252
NciI	CCSGG	2 cut(s)	299, 923
NcoI	CCATGG	1 cut(s)	184
NdeI	CATATG	1 cut(s)	595
NdeII	GATC	3 cut(s)	403, 624, 826
NlaIII	CATG	9 cut(s)	188, 726, 764, 854, 1128, 1208, 1277, 1331, 1456
NmuCI	GTSAC	2 cut(s)	241, 778
NsiI	ATGCAT	1 cut(s)	388
NspI	RCATGY	2 cut(s)	1208, 1331
NspV	TTCGAA	2 cut(s)	374, 446
PagI	TCATGA	2 cut(s)	760, 850
PciSI	GCTCTTC	1 cut(s)	509
PcsI	WCGNNNNNNNCGW	2 cut(s)	93, 371
PctI	GAATGC	2 cut(s)	843, 1410
PfeI	GAWTC	4 cut(s)	317, 861, 1058, 1471
PflFI	GACNNNGTC	1 cut(s)	224
PfoI	TCCNGGA	1 cut(s)	921
PinAI	ACCGGT	1 cut(s)	802
PkrI	GCNGC	9 cut(s)	119, 131, 164, 167, 209, 499, 1272, 1288, 1426
Ple19I	CGATCG	1 cut(s)	829
PluTI	GGCGCC	1 cut(s)	255
PmaCI	CACGTG	2 cut(s)	88, 694
PmlI	CACGTG	2 cut(s)	88, 694
Ppu21I	YACGTR	2 cut(s)	88, 694
PpuMI	RGGWCCY	2 cut(s)	1025, 1211
Psp124BI	GAGCTC	2 cut(s)	897, 1368
Psp5II	RGGWCCY	2 cut(s)	1025, 1211
Psp6I	CCWGG	4 cut(s)	348, 903, 1011, 1028
PspCI	CACGTG	2 cut(s)	88, 694
PspFI	CCCAGC	2 cut(s)	908, 1390
PspGI	CCWGG	4 cut(s)	348, 903, 1011, 1028
PspPI	GGNCC	5 cut(s)	698, 1025, 1211, 1242, 1346
PspPPI	RGGWCCY	2 cut(s)	1025, 1211
PstNI	CAGNNNCTG	1 cut(s)	678
PsyI	GACNNNGTC	1 cut(s)	224
PvuI	CGATCG	1 cut(s)	829
PvuII	CAGCTG	1 cut(s)	1289
RsaI	GTAC	3 cut(s)	175, 345, 605
RsaNI	GTAC	3 cut(s)	174, 344, 604
SacI	GAGCTC	2 cut(s)	897, 1368
SapI	GCTCTTC	1 cut(s)	509
SaqAI	TTAA	1 cut(s)	1485
SatI	GCNGC	9 cut(s)	118, 130, 163, 166, 208, 498, 1271, 1287, 1425
Sau3AI	GATC	3 cut(s)	403, 624, 826
Sau96I	GGNCC	5 cut(s)	698, 1025, 1211, 1242, 1346
ScrFI	CCNGG	6 cut(s)	299, 350, 905, 923, 1013, 1030
SduI	GDGCHC	6 cut(s)	477, 588, 897, 1224, 1296, 1368
SfaNI	GCATC	4 cut(s)	598, 718, 909, 976
SfoI	GGCGCC	1 cut(s)	253
SfuI	TTCGAA	2 cut(s)	374, 446
SinI	GGWCC	3 cut(s)	1025, 1211, 1346
SspDI	GGCGCC	1 cut(s)	251
SspMI	CTAG	4 cut(s)	534, 873, 1055, 1215
SstI	GAGCTC	2 cut(s)	897, 1368
StyD4I	CCNGG	6 cut(s)	297, 348, 903, 921, 1011, 1028
StyI	CCWWGG	1 cut(s)	184
TaaI	ACNGT	2 cut(s)	784, 1238
TaiI	ACGT	2 cut(s)	90, 696
TaqI	TCGA	7 cut(s)	96, 315, 365, 374, 446, 915, 1401
TatI	WGTACW	1 cut(s)	343
TauI	GCSGC	3 cut(s)	120, 132, 210
TfiI	GAWTC	4 cut(s)	317, 861, 1058, 1471
Tru1I	TTAA	1 cut(s)	1485
Tru9I	TTAA	1 cut(s)	1485
TscAI	CASTG	1 cut(s)	363
TseFI	GTSAC	2 cut(s)	241, 778
TseI	GCWGC	6 cut(s)	162, 165, 497, 1270, 1286, 1424
Tsp45I	GTSAC	2 cut(s)	241, 778
TspDTI	ATGAA	7 cut(s)	170, 699, 749, 1008, 1035, 1098, 1175
TspGWI	ACGGA	2 cut(s)	36, 166
TspRI	CASTG	1 cut(s)	363
Tth111I	GACNNNGTC	1 cut(s)	224
VpaK11BI	GGWCC	3 cut(s)	1025, 1211, 1346
XapI	RAATTY	6 cut(s)	236, 275, 283, 687, 963, 977
XceI	RCATGY	2 cut(s)	1208, 1331
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1262, 1320
XspI	CTAG	4 cut(s)	534, 873, 1055, 1215
Zsp2I	ATGCAT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.