pycom02g00830

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
495660 .. 498782
3123 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g00830.8

Sequence Viewer

Length: 1494 bp
ATGGCTGGGAGTGGATTGTTTGCAGAGATTGTTGATGGAGAAGCATACAAGTATTATGCTGATGGAGAGTGGAAGAAATCATCTTCTGGTAAACTTGTTCCCATCATCAACCCTACCACAAGAAAGGTCCACTACAAGGTTCAAGCTTGTACACAGGAAGAGGTTAACAAGGTCATGGAGACCGCGAAAATTGCACAGAAGACATGGGCTAAGACCCCGCTTTGGAAGCGGGCCGAGCTCCTTCACAAGGCTGCTTCTATCCTCAAAGAACACAAGGCTCCAATTGGGGAGTCACTGGTTAAAGAAATTGCTAAACCTGCTAAAGATGCTATCACAGAGGTTGTGAGGTCTGGAGATTTGGTGTCTTACTGCGCCGAAGAAGGGGTTAGGATTCTCGGGGAAGGGAAGTTCTTGGTGTCTGATAGTTTCCCAGGAAATGACAGAACAAAATATTGCTTAACTTCCAAGATTCCGCTCGGTGTGGTTCTAGCCATTCCACCATTTAACTATCCTGTCAACCTTGCTGTCTCAAAAATTGCTCCTGCGCTGATCGCTGGAAACGCCCTTGTGCTCAAGCCCCCAACTCAGGGTGCTGTTTCTTGCCTTCATATGGTGCATTGCTTCCACTTGGCTGGATTTCCCAAAGGCCTTATTAGCTGTGTCACTGGGAAAGGATCTGAGATCGGCGACTTCCTTACCATGCATCCTGGAGTGGACTGCATTAGCTTCACTGGTGGTGACACCGGCATTGCAATTTCGAAGAAGGCAGGCATGATCGATCCTCTTCAGATGGAGTTGGGAGGAAAAGATGCATGCATTGTGCTTGAAGATGCCGACCTAGATTTGGTCGCGGCAAATATAATAAAGGGAGGCTTTTCATACAGTGGTCAAAGATGTACGGCTGTTAAGGTTGTCTTGGTGATGGAATCCGTTGCTGATGCCCTCGTCGCGAAAGTGAATGCACGAGTGGCAAAATTAACCGTTGGTCCACCAGAGGAGAACAGTGACATCACTCCTGTTGTCTCGGAATCATCTGCAAATTTTATTGAAGGTTTGGTTGTGGATGCAAAACAGAAAGGAGCAACATTTTGCCAAGAGTACAAGAGAGAGGGCAACCTTATCTGGCCTTTGTTGTTAGATAATGTCAGACCGGATATGAGAATTGCGTGGGAAGAGCCATTCGGCCCAGTCTTGCCCGTTATTAGGATTACTACGGTAGAAGAAGGAATCCACCATTGTAATGCCAGTAATTTCGGACTCCAGGGCTGTGTGTTCACAAAGGACATCAACAAGGCCATTTTGATTGGTGATGCAATGGAGACAGGAACTGTTCAAATAAACTCCGCACCTGCTCGTGGAGCTGATCATTTTCCGTTCCAGGGCATAAAGGACAGTGGAATTGGGTCACAAGGAATCACCAACAGCATCAACATGATGACCAAGATCAAGACCACTGTAATCAACTTGCCAACACCTTCTTACACCATGGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

498

Amino Acids

53.17

Weight (kDa)

6.8

Isoelectric Point (pI)

34.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1357
Acc36I ACCTGC 2 cut(s) 325, 1357
AccBSI CCGCTC 1 cut(s) 475
AccII CGCG 3 cut(s) 185, 851, 950
AciI CCGC 6 cut(s) 183, 218, 229, 473, 851, 1344
AclWI GGATC 2 cut(s) 682, 773
AcsI RAATTY 1 cut(s) 1039
AcuI CTGAAG 1 cut(s) 770
AfaI GTAC 3 cut(s) 151, 898, 1100
AgsI TTSAA 4 cut(s) 143, 827, 1049, 1334
AjnI CCWGG 4 cut(s) 430, 706, 1260, 1377
AloI GAACNNNNNNTCC 2 cut(s) 392, 424
AluBI AGCT 5 cut(s) 146, 238, 657, 726, 1361
AluI AGCT 5 cut(s) 146, 238, 657, 726, 1361
Alw21I GWGCWC 2 cut(s) 240, 573
Alw26I GTCTC 4 cut(s) 173, 532, 1027, 1313
AlwI GGATC 2 cut(s) 682, 773
AlwNI CAGNNNCTG 1 cut(s) 1328
Ama87I CYCGRG 1 cut(s) 395
AoxI GGCC 5 cut(s) 231, 646, 1124, 1183, 1293
ApeKI GCWGC 1 cut(s) 251
ApoI RAATTY 1 cut(s) 1039
AspLEI GCGC 2 cut(s) 374, 547
AspS9I GGNCC 4 cut(s) 127, 231, 986, 1184
AsuHPI GGTGA 4 cut(s) 749, 931, 1319, 1408
AsuII TTCGAA 1 cut(s) 758
AvaI CYCGRG 1 cut(s) 395
AvaII GGWCC 2 cut(s) 127, 986
BanII GRGCYC 1 cut(s) 240
BauI CACGAG 2 cut(s) 963, 1353
BbsI GAAGAC 1 cut(s) 206
Bbv12I GWGCWC 2 cut(s) 240, 573
BbvI GCAGC 1 cut(s) 238
BccI CCATC 5 cut(s) 29, 56, 110, 784, 916
BceAI ACGGC 1 cut(s) 915
BciT130I CCWGG 4 cut(s) 432, 708, 1262, 1379
BclI TGATCA 1 cut(s) 1363
BcoDI GTCTC 4 cut(s) 173, 532, 1027, 1313
BfaI CTAG 2 cut(s) 488, 839
BfuAI ACCTGC 2 cut(s) 325, 1357
BisI GCNGC 2 cut(s) 252, 852
BlsI GCNGC 2 cut(s) 253, 853
Bme1390I CCNGG 4 cut(s) 432, 708, 1262, 1379
Bme18I GGWCC 2 cut(s) 127, 986
BmeT110I CYCGRG 1 cut(s) 395
BmgT120I GGNCC 4 cut(s) 127, 231, 986, 1184
BmiI GGNNCC 1 cut(s) 279
BmrFI CCNGG 4 cut(s) 432, 708, 1262, 1379
BmrI ACTGGG 2 cut(s) 675, 1181
BmsI GCATC 8 cut(s) 316, 712, 799, 820, 928, 1054, 1300, 1434
BmuI ACTGGG 2 cut(s) 675, 1181
BpiI GAAGAC 1 cut(s) 206
BpmI CTGGAG 3 cut(s) 372, 729, 1244
Bpu14I TTCGAA 1 cut(s) 758
BpuEI CTTGAG 1 cut(s) 557
Bsa29I ATCGAT 1 cut(s) 777
BsaI GGTCTC 1 cut(s) 173
BsaJI CCNNGG 4 cut(s) 430, 1261, 1378, 1485
BsaWI WCCGGW 1 cut(s) 1150
BsaXI ACNNNNNCTCC 2 cut(s) 345, 375
Bse118I RCCGGY 1 cut(s) 743
Bse1I ACTGG 5 cut(s) 300, 670, 736, 1187, 1245
Bse3DI GCAATG 3 cut(s) 616, 747, 1320
BseBI CCWGG 4 cut(s) 432, 708, 1262, 1379
BseCI ATCGAT 1 cut(s) 777
BseDI CCNNGG 4 cut(s) 430, 1261, 1378, 1485
BseGI GGATG 2 cut(s) 703, 1069
BseMI GCAATG 3 cut(s) 616, 747, 1320
BseMII CTCAG 2 cut(s) 599, 669
BseNI ACTGG 5 cut(s) 300, 670, 736, 1187, 1245
BseRI GAGGAG 1 cut(s) 1010
BseXI GCAGC 1 cut(s) 238
BseYI CCCAGC 1 cut(s) 5
Bsh1236I CGCG 3 cut(s) 185, 851, 950
BshFI GGCC 5 cut(s) 233, 648, 1126, 1185, 1295
BshVI ATCGAT 1 cut(s) 777
BsiHKAI GWGCWC 2 cut(s) 240, 573
BsiHKCI CYCGRG 1 cut(s) 395
BsiSI CCGG 2 cut(s) 744, 1151
BsmAI GTCTC 4 cut(s) 173, 532, 1027, 1313
BsmI GAATGC 1 cut(s) 964
BsnI GGCC 5 cut(s) 233, 648, 1126, 1185, 1295
Bso31I GGTCTC 1 cut(s) 173
BsoBI CYCGRG 1 cut(s) 395
Bsp119I TTCGAA 1 cut(s) 758
Bsp1286I GDGCHC 2 cut(s) 240, 573
Bsp1407I TGTACA 1 cut(s) 149
Bsp143I GATC 7 cut(s) 549, 674, 681, 774, 778, 1363, 1443
Bsp19I CCATGG 1 cut(s) 1485
Bsp68I TCGCGA 1 cut(s) 950
BspACI CCGC 6 cut(s) 183, 218, 229, 473, 851, 1344
BspANI GGCC 5 cut(s) 233, 648, 1126, 1185, 1295
BspCNI CTCAG 2 cut(s) 598, 670
BspDI ATCGAT 1 cut(s) 777
BspFNI CGCG 3 cut(s) 185, 851, 950
BspLI GGNNCC 1 cut(s) 279
BspMI ACCTGC 2 cut(s) 325, 1357
BspPI GGATC 2 cut(s) 682, 773
BspQI GCTCTTC 1 cut(s) 1167
BspT104I TTCGAA 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 173
BsrBI CCGCTC 1 cut(s) 475
BsrDI GCAATG 3 cut(s) 616, 747, 1320
BsrFI RCCGGY 1 cut(s) 743
BsrGI TGTACA 1 cut(s) 149
BsrI ACTGG 5 cut(s) 300, 670, 736, 1187, 1245
BssAI RCCGGY 1 cut(s) 743
BssECI CCNNGG 4 cut(s) 430, 1261, 1378, 1485
BssMI GATC 7 cut(s) 549, 674, 681, 774, 778, 1363, 1443
BssSI CACGAG 2 cut(s) 963, 1353
BssT1I CCWWGG 1 cut(s) 1485
Bst2BI CACGAG 2 cut(s) 963, 1353
Bst2UI CCWGG 4 cut(s) 432, 708, 1262, 1379
Bst4CI ACNGT 7 cut(s) 884, 982, 1004, 1216, 1330, 1394, 1456
Bst6I CTCTTC 3 cut(s) 153, 789, 1167
BstAUI TGTACA 1 cut(s) 149
BstBI TTCGAA 1 cut(s) 758
BstC8I GCNNGC 3 cut(s) 231, 769, 814
BstDEI CTNAG 3 cut(s) 210, 585, 678
BstDSI CCRYGG 1 cut(s) 1485
BstENI CCTNNNNNAGG 1 cut(s) 245
BstF5I GGATG 2 cut(s) 703, 1069
BstFNI CGCG 3 cut(s) 185, 851, 950
BstHHI GCGC 2 cut(s) 374, 547
BstKTI GATC 7 cut(s) 552, 677, 684, 777, 781, 1366, 1446
BstMAI GTCTC 4 cut(s) 173, 532, 1027, 1313
BstMBI GATC 7 cut(s) 549, 674, 681, 774, 778, 1363, 1443
BstNI CCWGG 4 cut(s) 432, 708, 1262, 1379
BstNSI RCATGY 1 cut(s) 816
BstSCI CCNGG 4 cut(s) 430, 706, 1260, 1377
BstUI CGCG 3 cut(s) 185, 851, 950
BstV1I GCAGC 1 cut(s) 238
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 1 cut(s) 674
BstXI CCANNNNNNTGG 1 cut(s) 632
BstYI RGATCY 1 cut(s) 674
Bsu15I ATCGAT 1 cut(s) 777
BsuRI GGCC 5 cut(s) 233, 648, 1126, 1185, 1295
BsuTUI ATCGAT 1 cut(s) 777
BtgI CCRYGG 1 cut(s) 1485
BtsCI GGATG 2 cut(s) 703, 1069
BtsIMutI CAGTG 7 cut(s) 293, 663, 729, 889, 1009, 1399, 1452
BtuMI TCGCGA 1 cut(s) 950
BveI ACCTGC 2 cut(s) 325, 1357
Cac8I GCNNGC 3 cut(s) 231, 769, 814
CaiI CAGNNNCTG 1 cut(s) 1328
CfoI GCGC 2 cut(s) 374, 547
Cfr10I RCCGGY 1 cut(s) 743
Cfr13I GGNCC 4 cut(s) 127, 231, 986, 1184
ClaI ATCGAT 1 cut(s) 777
Csp6I GTAC 3 cut(s) 150, 897, 1099
CviAII CATG 7 cut(s) 175, 204, 700, 772, 813, 1432, 1486
CviQI GTAC 3 cut(s) 150, 897, 1099
DdeI CTNAG 3 cut(s) 210, 585, 678
DpnI GATC 7 cut(s) 551, 676, 683, 776, 780, 1365, 1445
DpnII GATC 7 cut(s) 549, 674, 681, 774, 778, 1363, 1443
Eam1104I CTCTTC 3 cut(s) 153, 789, 1167
EarI CTCTTC 3 cut(s) 153, 789, 1167
Ecl136II GAGCTC 1 cut(s) 238
Eco130I CCWWGG 1 cut(s) 1485
Eco147I AGGCCT 1 cut(s) 648
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 173
Eco47I GGWCC 2 cut(s) 127, 986
Eco53kI GAGCTC 1 cut(s) 238
Eco57I CTGAAG 1 cut(s) 770
Eco88I CYCGRG 1 cut(s) 395
EcoICRI GAGCTC 1 cut(s) 238
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoRII CCWGG 4 cut(s) 430, 706, 1260, 1377
EcoT14I CCWWGG 1 cut(s) 1485
EcoT22I ATGCAT 3 cut(s) 705, 814, 818
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 1 cut(s) 1485
FaeI CATG 7 cut(s) 178, 207, 703, 775, 816, 1435, 1489
FalI AAGNNNNNCTT 4 cut(s) 857, 889, 899, 931
FatI CATG 7 cut(s) 174, 203, 699, 771, 812, 1431, 1485
FauI CCCGC 2 cut(s) 222, 225
FauNDI CATATG 1 cut(s) 609
FbaI TGATCA 1 cut(s) 1363
Fnu4HI GCNGC 2 cut(s) 252, 852
FokI GGATG 2 cut(s) 690, 1076
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 2 cut(s) 252, 852
FspBI CTAG 2 cut(s) 488, 839
GlaI GCGC 2 cut(s) 373, 546
GluI GCNGC 2 cut(s) 252, 852
GsaI CCCAGC 1 cut(s) 9
GsuI CTGGAG 3 cut(s) 372, 729, 1244
HaeIII GGCC 5 cut(s) 233, 648, 1126, 1185, 1295
HapII CCGG 2 cut(s) 744, 1151
HhaI GCGC 2 cut(s) 374, 547
Hin1II CATG 7 cut(s) 178, 207, 703, 775, 816, 1435, 1489
Hin6I GCGC 2 cut(s) 372, 545
HinP1I GCGC 2 cut(s) 372, 545
HincII GTYRAC 2 cut(s) 166, 517
HindII GTYRAC 2 cut(s) 166, 517
HindIII AAGCTT 1 cut(s) 144
HinfI GANTC 8 cut(s) 290, 391, 469, 926, 1028, 1227, 1257, 1413
HpaI GTTAAC 1 cut(s) 166
HpaII CCGG 2 cut(s) 744, 1151
HphI GGTGA 4 cut(s) 749, 931, 1319, 1408
Hpy166II GTNNAC 8 cut(s) 92, 130, 152, 166, 517, 715, 989, 1275
Hpy188I TCNGA 6 cut(s) 421, 679, 789, 1027, 1148, 1256
Hpy188III TCNNGA 3 cut(s) 351, 949, 1447
Hpy8I GTNNAC 8 cut(s) 92, 130, 152, 166, 517, 715, 989, 1275
Hpy99I CGWCG 1 cut(s) 950
HpyAV CCTTC 8 cut(s) 251, 374, 395, 614, 757, 1043, 1217, 1485
HpyCH4III ACNGT 7 cut(s) 884, 982, 1004, 1216, 1330, 1394, 1456
HpyF3I CTNAG 3 cut(s) 210, 585, 678
Hsp92II CATG 7 cut(s) 178, 207, 703, 775, 816, 1435, 1489
HspAI GCGC 2 cut(s) 372, 545
Ksp22I TGATCA 1 cut(s) 1363
KspAI GTTAAC 1 cut(s) 166
Kzo9I GATC 7 cut(s) 549, 674, 681, 774, 778, 1363, 1443
LguI GCTCTTC 1 cut(s) 1167
LmnI GCTCC 5 cut(s) 243, 283, 544, 1079, 1358
Lsp1109I GCAGC 1 cut(s) 238
LweI GCATC 8 cut(s) 316, 712, 799, 820, 928, 1054, 1300, 1434
MaeI CTAG 2 cut(s) 488, 839
MaeIII GTNAC 5 cut(s) 291, 661, 737, 1004, 1404
MalI GATC 7 cut(s) 551, 676, 683, 776, 780, 1365, 1445
MbiI CCGCTC 1 cut(s) 475
MboI GATC 7 cut(s) 549, 674, 681, 774, 778, 1363, 1443
MfeI CAATTG 1 cut(s) 282
MflI RGATCY 1 cut(s) 674
MhlI GDGCHC 2 cut(s) 240, 573
MlyI GAGTC 2 cut(s) 299, 1251
Mph1103I ATGCAT 3 cut(s) 705, 814, 818
MseI TTAA 6 cut(s) 165, 300, 458, 504, 906, 977
MslI CAYNNNNRTG 2 cut(s) 1239, 1430
MspI CCGG 2 cut(s) 744, 1151
MspR9I CCNGG 4 cut(s) 432, 708, 1262, 1379
MunI CAATTG 1 cut(s) 282
Mva1269I GAATGC 1 cut(s) 964
MvaI CCWGG 4 cut(s) 432, 708, 1262, 1379
MvnI CGCG 3 cut(s) 185, 851, 950
NcoI CCATGG 1 cut(s) 1485
NdeI CATATG 1 cut(s) 609
NdeII GATC 7 cut(s) 549, 674, 681, 774, 778, 1363, 1443
NlaIII CATG 7 cut(s) 178, 207, 703, 775, 816, 1435, 1489
NlaIV GGNNCC 1 cut(s) 279
NmeAIII GCCGAG 1 cut(s) 259
NmuCI GTSAC 5 cut(s) 291, 661, 737, 1004, 1404
NruI TCGCGA 1 cut(s) 950
NsiI ATGCAT 3 cut(s) 705, 814, 818
NspI RCATGY 1 cut(s) 816
NspV TTCGAA 1 cut(s) 758
PaeI GCATGC 1 cut(s) 816
PaqCI CACCTGC 1 cut(s) 1357
PceI AGGCCT 1 cut(s) 648
PciSI GCTCTTC 1 cut(s) 1167
PctI GAATGC 1 cut(s) 964
PfeI GAWTC 6 cut(s) 391, 469, 926, 1028, 1227, 1413
PfoI TCCNGGA 1 cut(s) 706
PkrI GCNGC 2 cut(s) 253, 853
PleI GAGTC 2 cut(s) 298, 1251
PpsI GAGTC 2 cut(s) 298, 1251
Psp124BI GAGCTC 1 cut(s) 240
Psp6I CCWGG 4 cut(s) 430, 706, 1260, 1377
PspFI CCCAGC 1 cut(s) 5
PspGI CCWGG 4 cut(s) 430, 706, 1260, 1377
PspN4I GGNNCC 1 cut(s) 279
PspPI GGNCC 4 cut(s) 127, 231, 986, 1184
PstNI CAGNNNCTG 1 cut(s) 1328
PsuI RGATCY 1 cut(s) 674
RruI TCGCGA 1 cut(s) 950
RsaI GTAC 3 cut(s) 151, 898, 1100
RsaNI GTAC 3 cut(s) 150, 897, 1099
RseI CAYNNNNRTG 2 cut(s) 1239, 1430
SacI GAGCTC 1 cut(s) 240
SapI GCTCTTC 1 cut(s) 1167
SaqAI TTAA 6 cut(s) 165, 300, 458, 504, 906, 977
SatI GCNGC 2 cut(s) 252, 852
Sau3AI GATC 7 cut(s) 549, 674, 681, 774, 778, 1363, 1443
Sau96I GGNCC 4 cut(s) 127, 231, 986, 1184
SchI GAGTC 2 cut(s) 299, 1251
ScrFI CCNGG 4 cut(s) 432, 708, 1262, 1379
SduI GDGCHC 2 cut(s) 240, 573
SfaNI GCATC 8 cut(s) 316, 712, 799, 820, 928, 1054, 1300, 1434
SfuI TTCGAA 1 cut(s) 758
SinI GGWCC 2 cut(s) 127, 986
SmiMI CAYNNNNRTG 2 cut(s) 1239, 1430
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
SphI GCATGC 1 cut(s) 816
SseBI AGGCCT 1 cut(s) 648
SsiI CCGC 6 cut(s) 183, 218, 229, 473, 851, 1344
SspI AATATT 1 cut(s) 452
SspMI CTAG 2 cut(s) 488, 839
SstI GAGCTC 1 cut(s) 240
StuI AGGCCT 1 cut(s) 648
StyD4I CCNGG 4 cut(s) 430, 706, 1260, 1377
StyI CCWWGG 1 cut(s) 1485
TaaI ACNGT 7 cut(s) 884, 982, 1004, 1216, 1330, 1394, 1456
TaqI TCGA 2 cut(s) 758, 777
TatI WGTACW 2 cut(s) 149, 1098
TauI GCSGC 1 cut(s) 854
TfiI GAWTC 6 cut(s) 391, 469, 926, 1028, 1227, 1413
Tru1I TTAA 6 cut(s) 165, 300, 458, 504, 906, 977
Tru9I TTAA 6 cut(s) 165, 300, 458, 504, 906, 977
TscAI CASTG 7 cut(s) 300, 670, 736, 889, 1009, 1399, 1459
TseFI GTSAC 5 cut(s) 291, 661, 737, 1004, 1404
TseI GCWGC 1 cut(s) 251
Tsp45I GTSAC 5 cut(s) 291, 661, 737, 1004, 1404
TspDTI ATGAA 2 cut(s) 596, 867
TspGWI ACGGA 2 cut(s) 919, 1362
TspRI CASTG 7 cut(s) 300, 670, 736, 889, 1009, 1399, 1459
VpaK11BI GGWCC 2 cut(s) 127, 986
XagI CCTNNNNNAGG 1 cut(s) 245
XapI RAATTY 1 cut(s) 1039
XceI RCATGY 1 cut(s) 816
XspI CTAG 2 cut(s) 488, 839
Zsp2I ATGCAT 3 cut(s) 705, 814, 818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.