Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0007245

Physical Location & Seq

Genomic Coordinates Reverse (-)

1057144 .. 1064967

Gene Structure 7824 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015727

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGTCAGGAGATGAAGTTGAGGTTCCCGTTCCCGCAGAGCCTGTTGCTGCTGCTCCAGCTCTTGGTGAGCCCATGGACCTCATGACAGCATTGCAACTTGTGCTGAGGAAGTCATTGGCTCATGGTGGGCTTACACGGGGCCTGCATGAAGCTGCCAAGGTCATTGAGAAGCATGCTGCACAGCTTTGCGTCTTGGCTGAGGACTGCGACCAGGCTGATTATGTTAAGCTGGTGAAGTCACTGTGTGCAGAGCATAATGTTAACCTAATGACAATTCCTAGTGCTAAAACTCTTGGAGAATGGTCTGGGCTTTGCAAGATTGATTCAGAAGGGAAGGCAAGAAAGGTCGTTGGTTGCTCTTGCGTTGTTGTCAAGGATTTTGGTGAAGATACAGAAGGCCTTCATGTTGTTCAGGAACAAATTGCAGTTCACCAAGGACTTAAAGAGATAGAACATCTCATGGCCCAGCTCAGCTTCAGTAACAGTTTTCATGGTTTTGAATCAATAATTGGCATAAAGTCCCAGCAGGTAGGTGGCAAGCGTGGTTTATCTACTTCATATTTTCCCAGGTGCAGTACTGTGACTACCACTCGTCCTCTTATTCGCCCAAGCAAAACGAACTCAGAGATATTGGATGGAGAAGCCTACAAGTACTACTCTGATGGAGAATGGAAGAAATCATCTTCTGGTAAACTTGTTCCCATCATCAACCCAACTACAAGAAAGGTTCACTACAAGGTTCAAGCTTGTACACAAGAAGAGGTCAACAAGGTGATGGAGTCAGCAAAAACTGCACAGAAGTTATGGGCAAAGACTCCACTTTGGAAGAGAGCAGAGCTACTTCACAAGGCTGCTTCTATCCTCAAGGAACAAAAAGCTCCAATTGCGGAGTGTTTGGTTAAAGAGATTGCTAAGCCTGCTAAAGATGCTGTTACGGAGGTTGTCAGGTCTGGAGATTTGATCTCTTACACTGCTGAAGAAGGGGTCAGGATCCTTGGTGAAGGGAAGTTCTTGTTGTCTGATAGTTTTCCTGGAAATGAAAGAACCAAGTACTGCCTCACTTCCAAGATTCCGCTTGGTGTGGTTCTAGCCATTCCACCATTTAACTATCCTGTCAACCTTGCCGTTTCAAAAATTGCTCCGGCATTGATTGCTGGAAACTCTCTTGTGCTCAAACCCCCAACTCAGGGTGCTGTTTCTGCCCTTCATATGGTACATTGTTTTCACTTGGCTGGTTTCCCCAAAGGCCTTATTAGCTGTGTCACTGGGAAAGGATCTGAGATAGGTGACTTCCTTACCATGCATCCTGGAGTAAATTGTATTAGCTTCACTGGTGGTGACACCGGTGTTGCAATTTCAAAAAAGGCAGGCATGATCCCTCTTCAGATGGAGTTGGGAGGAAAAGATGCCTGCATTGTGCTTGAAGATGCTGACCTTGATTTGGTGGCCGCAAACATAATAAAAGGAGGCTTTTCCTACAGTGGTCAGAGATGTACTGCTGTCAAGGTTGTGTTGGTGATGGAATCTGTTGCTGATGCCCTGGTTGAGAAAGTGAAGGCCAAGGTGGCAAAGTTAACTGTCGGGCCACCCGAGGAGAACTGTGACATCACTCCAGTTGTGACGGAATCATCTGCAAACTATATCGAAGGGTTGGTTATGGATGCAAAACAGAAAGAGGCAACATTTTGCCAGGAGTACAGAAGAGAGGGGAACCTTATCTGGCCCTTGTTGTTAGATAATGTCAGACCTGATATGAGAATTGCTTGGGAAGAGCCATTCGGTCCAGTTTTGCCAGTTATTAGGATTAGTACTGTTGAAGAAGGGATCCACCATTGCAATGCTAGCAATTTCGGACTACAGGGCTGTGTGTTCACCAAAGACATCAACAAAGCAATGTTGATCAGTGATGCAATGGAGACAGGAACAGTTCAGATAAACTCGGCGCCTGCTCGTGGTCCAGATCACTTTCCATTTCAGGGTATAAAAGATAGTGGAATTGGGTCACAGGGAATCACCAACAGCATCAACATGATGACCAAGATCAAGACCACTGTAATCAACTTACCAACCCCTTCTTACACCATGGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko01100 ko01120 ko01200 map00010 map00030 map01100 map01120 map01200

Pfam Domains

Protein Families

Aldedh

Protein Analysis

697

Amino Acids

74.93

Weight (kDa)

6.64

Isoelectric Point (pI)

36.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_L7Ae	PF01248	30 - 123	4.7e-25	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Aldedh	PF00171	224 - 683	3.9e-145	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24270 AT2G24270 AT2G24270 AT2G24270
fragaria_vesca	FvH4_1g01130 FvH4_1g01130
malus_domestica	MD02G1009300.v1.1 MD15G1154800.v1.1
prunus_persica	Prupe.7G260700_v2.0.a1 Prupe.7G260700_v2.0.a1 Prupe.7G260700_v2.0.a1
pyrus_communis	pycom02g00830 pycom15g13830
rosa_chinensis	RchiOBHm_Chr2g0085921
rosa_laevigata	RLG00000015727
rosa_multiflora	Rmu_sc0001748.1_g000003 Rmu_ssc0000355.1_g000030
rosa_roxburghii	Rroxscaffold_2G00154930
rosa_rugosa	Rorug01G0464300 Rorug01G0464400
rosa_samantha	Rh2AG013300 Rh2BG014000 Rh2CG014500 Rh2DG015800
rosa_wichuraiana	Rw2G001190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	517
AccB1I	GGYRCC	1 cut(s)	1942
AccB7I	CCANNNNNTGG	1 cut(s)	62
AciI	CCGC	4 cut(s)	33, 887, 1073, 1449
AclWI	GGATC	6 cut(s)	985, 998, 1282, 1369, 1819, 1832
AcoI	YGGCCR	1 cut(s)	1446
AcuI	CTGAAG	3 cut(s)	460, 996, 1367
AcyI	GRCGYC	1 cut(s)	1943
AdeI	CACNNNGTG	1 cut(s)	245
AfaI	GTAC	8 cut(s)	577, 653, 751, 1052, 1215, 1495, 1697, 1810
AfiI	CCNNNNNNNGG	7 cut(s)	62, 1186, 1187, 1210, 1441, 1952, 1976
AgeI	ACCGGT	1 cut(s)	1343
AgsI	TTSAA	6 cut(s)	500, 743, 1131, 1359, 1424, 1817
AjnI	CCWGG	6 cut(s)	210, 566, 1030, 1306, 1539, 1689
AjuI	GAANNNNNNNTTGG	2 cut(s)	492, 524
Alw21I	GWGCWC	1 cut(s)	1173
Alw26I	GTCTC	1 cut(s)	1910
AlwI	GGATC	6 cut(s)	985, 998, 1282, 1369, 1819, 1832
AlwNI	CAGNNNCTG	1 cut(s)	41
Ama87I	CYCGRG	1 cut(s)	1589
AoxI	GGCC	8 cut(s)	139, 397, 462, 1246, 1446, 1557, 1583, 1721
ApeKI	GCWGC	5 cut(s)	47, 50, 152, 176, 851
AsiGI	ACCGGT	1 cut(s)	1343
Asp700I	GAANNNNTTC	1 cut(s)	399
AspLEI	GCGC	1 cut(s)	1945
AspS9I	GGNCC	7 cut(s)	76, 139, 463, 1583, 1722, 1781, 1955
AsuNHI	GCTAGC	1 cut(s)	1841
AvaI	CYCGRG	1 cut(s)	1589
AvaII	GGWCC	3 cut(s)	76, 1781, 1955
BamHI	GGATCC	2 cut(s)	990, 1824
BanI	GGYRCC	1 cut(s)	1942
BanII	GRGCYC	1 cut(s)	72
BauI	CACGAG	1 cut(s)	1950
Bbv12I	GWGCWC	1 cut(s)	1173
BbvCI	CCTCAGC	2 cut(s)	104, 198
BbvI	GCAGC	5 cut(s)	34, 37, 139, 163, 838
BccI	CCATC	6 cut(s)	629, 656, 710, 769, 1381, 1513
BceAI	ACGGC	1 cut(s)	1109
BciT130I	CCWGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
BclI	TGATCA	1 cut(s)	1899
BcoDI	GTCTC	1 cut(s)	1910
BfaI	CTAG	3 cut(s)	279, 1088, 1842
BfmI	CTRYAG	2 cut(s)	1477, 1856
BfoI	RGCGCY	1 cut(s)	1946
BfuAI	ACCTGC	1 cut(s)	517
BglI	GCCNNNNNGGC	1 cut(s)	1565
BisI	GCNGC	6 cut(s)	48, 51, 153, 177, 852, 1449
BlpI	GCTNAGC	2 cut(s)	470, 912
BlsI	GCNGC	6 cut(s)	49, 52, 154, 178, 853, 1450
BmcAI	AGTACT	4 cut(s)	577, 653, 1052, 1810
Bme1390I	CCNGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
Bme18I	GGWCC	3 cut(s)	76, 1781, 1955
BmeT110I	CYCGRG	1 cut(s)	1589
BmgT120I	GGNCC	7 cut(s)	76, 139, 463, 1583, 1722, 1781, 1955
BmiI	GGNNCC	6 cut(s)	24, 140, 992, 1712, 1826, 1944
BmrFI	CCNGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
BmrI	ACTGGG	1 cut(s)	1275
BmsI	GCATC	8 cut(s)	916, 1312, 1396, 1417, 1525, 1651, 1897, 2031
BmtI	GCTAGC	1 cut(s)	1845
BmuI	ACTGGG	1 cut(s)	1275
BpmI	CTGGAG	4 cut(s)	39, 972, 1329, 1596
Bpu10I	CCTNAGC	2 cut(s)	104, 198
Bpu1102I	GCTNAGC	2 cut(s)	470, 912
BpuEI	CTTGAG	1 cut(s)	848
BsaHI	GRCGYC	1 cut(s)	1943
BsaJI	CCNNGG	9 cut(s)	72, 156, 433, 566, 994, 1539, 1560, 1590, 2082
BsaWI	WCCGGW	1 cut(s)	1343
BsaXI	ACNNNNNCTCC	1 cut(s)	30
Bsc4I	CCNNNNNNNGG	7 cut(s)	62, 1186, 1187, 1210, 1441, 1952, 1976
Bse118I	RCCGGY	1 cut(s)	1343
Bse1I	ACTGG	5 cut(s)	1270, 1336, 1613, 1784, 1793
Bse3DI	GCAATG	5 cut(s)	89, 1831, 1843, 1899, 1917
BseBI	CCWGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
BseDI	CCNNGG	9 cut(s)	72, 156, 433, 566, 994, 1539, 1560, 1590, 2082
BseGI	GGATG	3 cut(s)	640, 1303, 1666
BseLI	CCNNNNNNNGG	7 cut(s)	62, 1186, 1187, 1210, 1441, 1952, 1976
BseMI	GCAATG	5 cut(s)	89, 1831, 1843, 1899, 1917
BseMII	CTCAG	6 cut(s)	95, 189, 484, 636, 1199, 1269
BseNI	ACTGG	5 cut(s)	1270, 1336, 1613, 1784, 1793
BseRI	GAGGAG	1 cut(s)	1607
BseXI	GCAGC	5 cut(s)	34, 37, 139, 163, 838
BseYI	CCCAGC	2 cut(s)	465, 522
BsgI	GTGCAG	4 cut(s)	162, 267, 592, 777
BshFI	GGCC	8 cut(s)	141, 399, 464, 1248, 1448, 1559, 1585, 1723
BshNI	GGYRCC	1 cut(s)	1942
BshTI	ACCGGT	1 cut(s)	1343
BsiHKAI	GWGCWC	1 cut(s)	1173
BsiHKCI	CYCGRG	1 cut(s)	1589
BsiSI	CCGG	2 cut(s)	1142, 1344
BslFI	GGGAC	1 cut(s)	505
BslI	CCNNNNNNNGG	7 cut(s)	62, 1186, 1187, 1210, 1441, 1952, 1976
BsmAI	GTCTC	1 cut(s)	1910
BsmFI	GGGAC	1 cut(s)	505
BsnI	GGCC	8 cut(s)	141, 399, 464, 1248, 1448, 1559, 1585, 1723
BsoBI	CYCGRG	1 cut(s)	1589
Bsp1286I	GDGCHC	2 cut(s)	72, 1173
Bsp1407I	TGTACA	1 cut(s)	749
Bsp143I	GATC	8 cut(s)	960, 990, 1274, 1374, 1824, 1899, 1960, 2040
Bsp1720I	GCTNAGC	2 cut(s)	470, 912
Bsp19I	CCATGG	2 cut(s)	72, 2082
BspACI	CCGC	4 cut(s)	33, 887, 1073, 1449
BspANI	GGCC	8 cut(s)	141, 399, 464, 1248, 1448, 1559, 1585, 1723
BspCNI	CTCAG	6 cut(s)	96, 190, 483, 635, 1198, 1270
BspHI	TCATGA	1 cut(s)	81
BspLI	GGNNCC	6 cut(s)	24, 140, 992, 1712, 1826, 1944
BspMI	ACCTGC	1 cut(s)	517
BspOI	GCTAGC	1 cut(s)	1845
BspPI	GGATC	6 cut(s)	985, 998, 1282, 1369, 1819, 1832
BspQI	GCTCTTC	1 cut(s)	1764
BspT107I	GGYRCC	1 cut(s)	1942
BsrDI	GCAATG	5 cut(s)	89, 1831, 1843, 1899, 1917
BsrFI	RCCGGY	1 cut(s)	1343
BsrGI	TGTACA	1 cut(s)	749
BsrI	ACTGG	5 cut(s)	1270, 1336, 1613, 1784, 1793
BssAI	RCCGGY	1 cut(s)	1343
BssECI	CCNNGG	9 cut(s)	72, 156, 433, 566, 994, 1539, 1560, 1590, 2082
BssMI	GATC	8 cut(s)	960, 990, 1274, 1374, 1824, 1899, 1960, 2040
BssNI	GRCGYC	1 cut(s)	1943
BssSI	CACGAG	1 cut(s)	1950
BssT1I	CCWWGG	6 cut(s)	72, 156, 433, 994, 1560, 2082
Bst2BI	CACGAG	1 cut(s)	1950
Bst2UI	CCWGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
Bst4CI	ACNGT	9 cut(s)	243, 485, 580, 1481, 1579, 1601, 1813, 1927, 2053
Bst6I	CTCTTC	5 cut(s)	753, 821, 1386, 1696, 1764
BstACI	GRCGYC	1 cut(s)	1943
BstAPI	GCANNNNNTGC	3 cut(s)	100, 791, 1151
BstAUI	TGTACA	1 cut(s)	749
BstC8I	GCNNGC	8 cut(s)	143, 174, 539, 918, 1369, 1411, 1843, 1947
BstDEI	CTNAG	7 cut(s)	104, 198, 470, 622, 912, 1185, 1278
BstDSI	CCRYGG	2 cut(s)	72, 2082
BstF5I	GGATG	3 cut(s)	640, 1303, 1666
BstH2I	RGCGCY	1 cut(s)	1946
BstHHI	GCGC	1 cut(s)	1945
BstKTI	GATC	8 cut(s)	963, 993, 1277, 1377, 1827, 1902, 1963, 2043
BstMAI	GTCTC	1 cut(s)	1910
BstMBI	GATC	8 cut(s)	960, 990, 1274, 1374, 1824, 1899, 1960, 2040
BstNI	CCWGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
BstNSI	RCATGY	1 cut(s)	176
BstSCI	CCNGG	6 cut(s)	210, 566, 1030, 1306, 1539, 1689
BstSFI	CTRYAG	2 cut(s)	1477, 1856
BstV1I	GCAGC	5 cut(s)	34, 37, 139, 163, 838
BstX2I	RGATCY	3 cut(s)	990, 1274, 1824
BstYI	RGATCY	3 cut(s)	990, 1274, 1824
BsuRI	GGCC	8 cut(s)	141, 399, 464, 1248, 1448, 1559, 1585, 1723
BtgI	CCRYGG	2 cut(s)	72, 2082
BtsCI	GGATG	3 cut(s)	640, 1303, 1666
BtsI	GCAGTG	1 cut(s)	969
BtsIMutI	CAGTG	7 cut(s)	239, 969, 1263, 1329, 1486, 1909, 2049
BveI	ACCTGC	1 cut(s)	517
Cac8I	GCNNGC	8 cut(s)	143, 174, 539, 918, 1369, 1411, 1843, 1947
CaiI	CAGNNNCTG	1 cut(s)	41
CciI	TCATGA	1 cut(s)	81
CfoI	GCGC	1 cut(s)	1945
Cfr10I	RCCGGY	1 cut(s)	1343
Cfr13I	GGNCC	7 cut(s)	76, 139, 463, 1583, 1722, 1781, 1955
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	8 cut(s)	576, 652, 750, 1051, 1214, 1494, 1696, 1809
CspAI	ACCGGT	1 cut(s)	1343
CviQI	GTAC	8 cut(s)	576, 652, 750, 1051, 1214, 1494, 1696, 1809
DdeI	CTNAG	7 cut(s)	104, 198, 470, 622, 912, 1185, 1278
DinI	GGCGCC	1 cut(s)	1944
DpnI	GATC	8 cut(s)	962, 992, 1276, 1376, 1826, 1901, 1962, 2042
DpnII	GATC	8 cut(s)	960, 990, 1274, 1374, 1824, 1899, 1960, 2040
DraIII	CACNNNGTG	1 cut(s)	245
EaeI	YGGCCR	1 cut(s)	1446
Eam1104I	CTCTTC	5 cut(s)	753, 821, 1386, 1696, 1764
EarI	CTCTTC	5 cut(s)	753, 821, 1386, 1696, 1764
Eco130I	CCWWGG	6 cut(s)	72, 156, 433, 994, 1560, 2082
Eco147I	AGGCCT	2 cut(s)	399, 1248
Eco24I	GRGCYC	1 cut(s)	72
Eco47I	GGWCC	3 cut(s)	76, 1781, 1955
Eco57I	CTGAAG	3 cut(s)	460, 996, 1367
Eco88I	CYCGRG	1 cut(s)	1589
EcoO109I	RGGNCCY	1 cut(s)	139
EcoRII	CCWGG	6 cut(s)	210, 566, 1030, 1306, 1539, 1689
EcoT14I	CCWWGG	6 cut(s)	72, 156, 433, 994, 1560, 2082
EcoT22I	ATGCAT	1 cut(s)	1305
EcoT38I	GRGCYC	1 cut(s)	72
EgeI	GGCGCC	1 cut(s)	1944
EheI	GGCGCC	1 cut(s)	1944
ErhI	CCWWGG	6 cut(s)	72, 156, 433, 994, 1560, 2082
FaqI	GGGAC	1 cut(s)	505
FauI	CCCGC	1 cut(s)	40
FauNDI	CATATG	1 cut(s)	1209
FbaI	TGATCA	1 cut(s)	1899
Fnu4HI	GCNGC	6 cut(s)	48, 51, 153, 177, 852, 1449
FokI	GGATG	3 cut(s)	647, 1290, 1673
FriOI	GRGCYC	1 cut(s)	72
Fsp4HI	GCNGC	6 cut(s)	48, 51, 153, 177, 852, 1449
FspBI	CTAG	3 cut(s)	279, 1088, 1842
GlaI	GCGC	1 cut(s)	1944
GluI	GCNGC	6 cut(s)	48, 51, 153, 177, 852, 1449
GsaI	CCCAGC	2 cut(s)	469, 526
GsuI	CTGGAG	4 cut(s)	39, 972, 1329, 1596
HaeII	RGCGCY	1 cut(s)	1946
HaeIII	GGCC	8 cut(s)	141, 399, 464, 1248, 1448, 1559, 1585, 1723
HapII	CCGG	2 cut(s)	1142, 1344
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	1 cut(s)	1945
Hin1I	GRCGYC	1 cut(s)	1943
Hin6I	GCGC	1 cut(s)	1943
HinP1I	GCGC	1 cut(s)	1943
HincII	GTYRAC	4 cut(s)	262, 766, 1117, 1575
HindII	GTYRAC	4 cut(s)	262, 766, 1117, 1575
HindIII	AAGCTT	1 cut(s)	744
HinfI	GANTC	8 cut(s)	323, 500, 779, 814, 1069, 1523, 1625, 2010
HpaI	GTTAAC	2 cut(s)	262, 1575
HpaII	CCGG	2 cut(s)	1142, 1344
Hpy166II	GTNNAC	9 cut(s)	262, 430, 692, 730, 752, 766, 1117, 1575, 1872
Hpy188III	TCNNGA	7 cut(s)	6, 82, 413, 951, 988, 1958, 2044
Hpy8I	GTNNAC	9 cut(s)	262, 430, 692, 730, 752, 766, 1117, 1575, 1872
HpyCH4III	ACNGT	9 cut(s)	243, 485, 580, 1481, 1579, 1601, 1813, 1927, 2053
HpyF3I	CTNAG	7 cut(s)	104, 198, 470, 622, 912, 1185, 1278
Hsp92I	GRCGYC	1 cut(s)	1943
HspAI	GCGC	1 cut(s)	1943
KasI	GGCGCC	1 cut(s)	1942
Ksp22I	TGATCA	1 cut(s)	1899
KspAI	GTTAAC	2 cut(s)	262, 1575
Kzo9I	GATC	8 cut(s)	960, 990, 1274, 1374, 1824, 1899, 1960, 2040
LguI	GCTCTTC	1 cut(s)	1764
LmnI	GCTCC	3 cut(s)	58, 883, 1144
Lsp1109I	GCAGC	5 cut(s)	34, 37, 139, 163, 838
LweI	GCATC	8 cut(s)	916, 1312, 1396, 1417, 1525, 1651, 1897, 2031
MaeI	CTAG	3 cut(s)	279, 1088, 1842
MalI	GATC	8 cut(s)	962, 992, 1276, 1376, 1826, 1901, 1962, 2042
MboI	GATC	8 cut(s)	960, 990, 1274, 1374, 1824, 1899, 1960, 2040
MfeI	CAATTG	1 cut(s)	882
MflI	RGATCY	3 cut(s)	990, 1274, 1824
MhlI	GDGCHC	2 cut(s)	72, 1173
Mly113I	GGCGCC	1 cut(s)	1943
MlyI	GAGTC	2 cut(s)	788, 808
Mph1103I	ATGCAT	1 cut(s)	1305
MroXI	GAANNNNTTC	1 cut(s)	399
MseI	TTAA	6 cut(s)	225, 261, 441, 900, 1104, 1574
MslI	CAYNNNNRTG	2 cut(s)	1836, 2027
MspI	CCGG	2 cut(s)	1142, 1344
MspR9I	CCNGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
MunI	CAATTG	1 cut(s)	882
MvaI	CCWGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
NarI	GGCGCC	1 cut(s)	1943
NcoI	CCATGG	2 cut(s)	72, 2082
NdeI	CATATG	1 cut(s)	1209
NdeII	GATC	8 cut(s)	960, 990, 1274, 1374, 1824, 1899, 1960, 2040
NheI	GCTAGC	1 cut(s)	1841
NlaIV	GGNNCC	6 cut(s)	24, 140, 992, 1712, 1826, 1944
NmeAIII	GCCGAG	1 cut(s)	1919
NmuCI	GTSAC	8 cut(s)	237, 580, 1261, 1286, 1337, 1601, 1618, 2001
NsiI	ATGCAT	1 cut(s)	1305
NspI	RCATGY	1 cut(s)	176
PaeI	GCATGC	1 cut(s)	176
PagI	TCATGA	1 cut(s)	81
PceI	AGGCCT	2 cut(s)	399, 1248
PciSI	GCTCTTC	1 cut(s)	1764
PcsI	WCGNNNNNNNCGW	1 cut(s)	1587
PdmI	GAANNNNTTC	1 cut(s)	399
PfeI	GAWTC	6 cut(s)	323, 500, 1069, 1523, 1625, 2010
PflMI	CCANNNNNTGG	1 cut(s)	62
PfoI	TCCNGGA	2 cut(s)	1030, 1306
PinAI	ACCGGT	1 cut(s)	1343
PkrI	GCNGC	6 cut(s)	49, 52, 154, 178, 853, 1450
PleI	GAGTC	2 cut(s)	787, 808
PluTI	GGCGCC	1 cut(s)	1946
PpsI	GAGTC	2 cut(s)	787, 808
Psp6I	CCWGG	6 cut(s)	210, 566, 1030, 1306, 1539, 1689
PspFI	CCCAGC	2 cut(s)	465, 522
PspGI	CCWGG	6 cut(s)	210, 566, 1030, 1306, 1539, 1689
PspN4I	GGNNCC	6 cut(s)	24, 140, 992, 1712, 1826, 1944
PspPI	GGNCC	7 cut(s)	76, 139, 463, 1583, 1722, 1781, 1955
PstNI	CAGNNNCTG	1 cut(s)	41
PsuI	RGATCY	3 cut(s)	990, 1274, 1824
RsaI	GTAC	8 cut(s)	577, 653, 751, 1052, 1215, 1495, 1697, 1810
RsaNI	GTAC	8 cut(s)	576, 652, 750, 1051, 1214, 1494, 1696, 1809
RseI	CAYNNNNRTG	2 cut(s)	1836, 2027
SapI	GCTCTTC	1 cut(s)	1764
SaqAI	TTAA	6 cut(s)	225, 261, 441, 900, 1104, 1574
SatI	GCNGC	6 cut(s)	48, 51, 153, 177, 852, 1449
Sau3AI	GATC	8 cut(s)	960, 990, 1274, 1374, 1824, 1899, 1960, 2040
Sau96I	GGNCC	7 cut(s)	76, 139, 463, 1583, 1722, 1781, 1955
ScaI	AGTACT	4 cut(s)	577, 653, 1052, 1810
SchI	GAGTC	2 cut(s)	788, 808
ScrFI	CCNGG	6 cut(s)	212, 568, 1032, 1308, 1541, 1691
SduI	GDGCHC	2 cut(s)	72, 1173
SfaNI	GCATC	8 cut(s)	916, 1312, 1396, 1417, 1525, 1651, 1897, 2031
SfcI	CTRYAG	2 cut(s)	1477, 1856
SfoI	GGCGCC	1 cut(s)	1944
SgrAI	CRCCGGYG	1 cut(s)	1343
SinI	GGWCC	3 cut(s)	76, 1781, 1955
SmiMI	CAYNNNNRTG	2 cut(s)	1836, 2027
SmlI	CTYRAG	1 cut(s)	863
SmoI	CTYRAG	1 cut(s)	863
SphI	GCATGC	1 cut(s)	176
SseBI	AGGCCT	2 cut(s)	399, 1248
SsiI	CCGC	4 cut(s)	33, 887, 1073, 1449
SspDI	GGCGCC	1 cut(s)	1942
SspMI	CTAG	3 cut(s)	279, 1088, 1842
StuI	AGGCCT	2 cut(s)	399, 1248
StyD4I	CCNGG	6 cut(s)	210, 566, 1030, 1306, 1539, 1689
StyI	CCWWGG	6 cut(s)	72, 156, 433, 994, 1560, 2082
TaaI	ACNGT	9 cut(s)	243, 485, 580, 1481, 1579, 1601, 1813, 1927, 2053
TaqI	TCGA	1 cut(s)	1644
TaqII	GACCGA	1 cut(s)	1769
TatI	WGTACW	7 cut(s)	575, 651, 749, 1050, 1493, 1695, 1808
TauI	GCSGC	1 cut(s)	1451
TfiI	GAWTC	6 cut(s)	323, 500, 1069, 1523, 1625, 2010
Tru1I	TTAA	6 cut(s)	225, 261, 441, 900, 1104, 1574
Tru9I	TTAA	6 cut(s)	225, 261, 441, 900, 1104, 1574
TscAI	CASTG	7 cut(s)	246, 976, 1270, 1336, 1486, 1909, 2056
TseFI	GTSAC	8 cut(s)	237, 580, 1261, 1286, 1337, 1601, 1618, 2001
TseI	GCWGC	5 cut(s)	47, 50, 152, 176, 851
Tsp45I	GTSAC	8 cut(s)	237, 580, 1261, 1286, 1337, 1601, 1618, 2001
TspDTI	ATGAA	7 cut(s)	27, 162, 392, 479, 546, 1053, 1196
TspGWI	ACGGA	2 cut(s)	950, 1637
TspRI	CASTG	7 cut(s)	246, 976, 1270, 1336, 1486, 1909, 2056
Van91I	CCANNNNNTGG	1 cut(s)	62
VpaK11BI	GGWCC	3 cut(s)	76, 1781, 1955
XceI	RCATGY	1 cut(s)	176
XcmI	CCANNNNNNNNNTGG	1 cut(s)	530
XmnI	GAANNNNTTC	1 cut(s)	399
XspI	CTAG	3 cut(s)	279, 1088, 1842
ZrmI	AGTACT	4 cut(s)	577, 653, 1052, 1810
Zsp2I	ATGCAT	1 cut(s)	1305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.