pycom02g01930

Adiponectin receptor protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0008678
Physical Location & Seq
Forward (+)
1171845 .. 1174153
2309 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g01930.1

Sequence Viewer

Length: 849 bp
ATGAGTCCCAAGGAAGGAGGAGCTCTTGCCAGGAAGAGATATTCATCAAAACAAACAACTCCTGCTTCTGCGAAACAAGTAGAAGAAGAAATTAAGAATCAACAAACCCTAATCCGTAACATTTCTTCTGCAGACAATATTAAGAACAAGAGGAGAAGGAAGAAGAAGAAGAAGCAAAACAAGGAAAATCCGAAGCGGTACGGGTTGATGTCGTATTGGGAGTTGCCGGGGTACATGAAGGACAATGAGTTCATACTCAATTACTACCGGGCCGATTGGTCTCTCCCGGAAGCTTTGTTTAGCGTTTTCCGGTGGCATAACGAAACCCTCAACGTTTGGACGCATTTGATCGGGTTTGTTCTGTTTCTGGGTTTGACTATGGCGAATTTGTTGGAAGTGCCTCAGGTAGCGGATCTCCTTGGCTTTTTTGCCAGGTCCACGCATATTAGTGGAGTCACAAATGTCTCCCGTAATTTCATTTCGGGGATGACAACAAATTTTATCGATTTGAAGCAAATGACACCTCAGGATATGGAATTTGCATCATCAGTAGCATCGGCTGAAATGGGCGTGGCACATTGGCCATTTTATGTGTTCCTCGCAGGCTCTATGTTCTGCCTCCTCTCAAGCACCATTTGCCACCTCTTTTCGTGTCACTCACACCCATTAAACCTCATGCTCCTCCGCATAGACTACGCTGGCATCACCACCATCGATCATCACCTCTTTCTTCCCTCCCATCTACTACATCTTCCAATGCGACTCGCGCTGGCAGTTCATCTACCTTGGCGGCATAACGGTCATGGGCATTTTCACCATCGTGACATTGCTCTCGCCAAAACTCTCTAG

Protein Analysis

283

Amino Acids

32.39

Weight (kDa)

9.63

Isoelectric Point (pI)

54.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HlyIII PF03006 103 - 240 5.6e-18 Haemolysin-III related
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 767
AciI CCGC 4 cut(s) 196, 410, 685, 790
AclI AACGTT 1 cut(s) 333
AclWI GGATC 1 cut(s) 420
AcoI YGGCCR 1 cut(s) 581
AcsI RAATTY 3 cut(s) 385, 496, 536
AfaI GTAC 2 cut(s) 200, 233
AfiI CCNNNNNNNGG 1 cut(s) 14
AgsI TTSAA 1 cut(s) 511
AjnI CCWGG 2 cut(s) 29, 431
AleI CACNNNNGTG 1 cut(s) 819
AloI GAACNNNNNNTCC 2 cut(s) 233, 265
AluBI AGCT 2 cut(s) 23, 293
AluI AGCT 2 cut(s) 23, 293
Alw21I GWGCWC 1 cut(s) 25
Alw26I GTCTC 2 cut(s) 285, 469
AlwI GGATC 1 cut(s) 420
AoxI GGCC 2 cut(s) 270, 581
ApoI RAATTY 3 cut(s) 385, 496, 536
AspLEI GCGC 1 cut(s) 769
AspS9I GGNCC 2 cut(s) 270, 435
AsuC2I CCSGG 3 cut(s) 228, 269, 287
AsuHPI GGTGA 3 cut(s) 697, 713, 806
AvaII GGWCC 1 cut(s) 435
AxyI CCTNAGG 2 cut(s) 402, 525
BalI TGGCCA 1 cut(s) 583
BanII GRGCYC 1 cut(s) 25
BarI GAAGNNNNNNTAC 2 cut(s) 109, 141
Bbv12I GWGCWC 1 cut(s) 25
BccI CCATC 3 cut(s) 719, 747, 825
BciT130I CCWGG 2 cut(s) 31, 433
BcnI CCSGG 3 cut(s) 228, 269, 287
BcoDI GTCTC 2 cut(s) 285, 469
BfaI CTAG 1 cut(s) 847
BfmI CTRYAG 1 cut(s) 129
BisI GCNGC 1 cut(s) 791
BlsI GCNGC 1 cut(s) 792
Bme1390I CCNGG 5 cut(s) 31, 228, 269, 287, 433
Bme18I GGWCC 1 cut(s) 435
BmgT120I GGNCC 2 cut(s) 270, 435
BmrFI CCNGG 5 cut(s) 31, 228, 269, 287, 433
BmsI GCATC 3 cut(s) 551, 563, 711
BpuEI CTTGAG 1 cut(s) 610
BpuMI CCSGG 3 cut(s) 228, 269, 287
Bsa29I ATCGAT 2 cut(s) 504, 714
BsaBI GATNNNNATC 1 cut(s) 43
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 4 cut(s) 9, 227, 418, 785
BsaWI WCCGGW 1 cut(s) 309
Bsc4I CCNNNNNNNGG 1 cut(s) 14
Bse21I CCTNAGG 2 cut(s) 402, 525
Bse3DI GCAATG 1 cut(s) 825
Bse8I GATNNNNATC 1 cut(s) 43
BseBI CCWGG 2 cut(s) 31, 433
BseCI ATCGAT 2 cut(s) 504, 714
BseDI CCNNGG 4 cut(s) 9, 227, 418, 785
BseGI GGATG 1 cut(s) 492
BseJI GATNNNNATC 1 cut(s) 43
BseLI CCNNNNNNNGG 1 cut(s) 14
BseMI GCAATG 1 cut(s) 825
BseMII CTCAG 2 cut(s) 416, 539
BseRI GAGGAG 4 cut(s) 33, 166, 611, 671
Bsh1236I CGCG 1 cut(s) 767
BshFI GGCC 2 cut(s) 272, 583
BshVI ATCGAT 2 cut(s) 504, 714
BsiHKAI GWGCWC 1 cut(s) 25
BsiSI CCGG 4 cut(s) 227, 268, 287, 310
BslI CCNNNNNNNGG 1 cut(s) 14
BsmAI GTCTC 2 cut(s) 285, 469
BsnI GGCC 2 cut(s) 272, 583
Bso31I GGTCTC 1 cut(s) 285
Bsp1286I GDGCHC 1 cut(s) 25
Bsp143I GATC 3 cut(s) 348, 412, 715
BspACI CCGC 4 cut(s) 196, 410, 685, 790
BspANI GGCC 2 cut(s) 272, 583
BspCNI CTCAG 2 cut(s) 415, 538
BspDI ATCGAT 2 cut(s) 504, 714
BspFNI CGCG 1 cut(s) 767
BspMAI CTGCAG 1 cut(s) 133
BspPI GGATC 1 cut(s) 420
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 825
BssECI CCNNGG 4 cut(s) 9, 227, 418, 785
BssMI GATC 3 cut(s) 348, 412, 715
BssT1I CCWWGG 3 cut(s) 9, 418, 785
Bst2UI CCWGG 2 cut(s) 31, 433
Bst4CI ACNGT 1 cut(s) 800
Bst6I CTCTTC 1 cut(s) 29
BstAPI GCANNNNNTGC 1 cut(s) 636
BstC8I GCNNGC 3 cut(s) 604, 700, 771
BstDEI CTNAG 2 cut(s) 402, 525
BstF5I GGATG 1 cut(s) 492
BstFNI CGCG 1 cut(s) 767
BstHHI GCGC 1 cut(s) 769
BstKTI GATC 3 cut(s) 351, 415, 718
BstMAI GTCTC 2 cut(s) 285, 469
BstMBI GATC 3 cut(s) 348, 412, 715
BstMWI GCNNNNNNNGC 2 cut(s) 636, 766
BstNI CCWGG 2 cut(s) 31, 433
BstSCI CCNGG 5 cut(s) 29, 226, 267, 285, 431
BstSFI CTRYAG 1 cut(s) 129
BstUI CGCG 1 cut(s) 767
BstX2I RGATCY 1 cut(s) 412
BstYI RGATCY 1 cut(s) 412
Bsu15I ATCGAT 2 cut(s) 504, 714
Bsu36I CCTNAGG 2 cut(s) 402, 525
BsuRI GGCC 2 cut(s) 272, 583
BsuTUI ATCGAT 2 cut(s) 504, 714
BtsCI GGATG 1 cut(s) 492
Cac8I GCNNGC 3 cut(s) 604, 700, 771
CfoI GCGC 1 cut(s) 769
Cfr13I GGNCC 2 cut(s) 270, 435
ClaI ATCGAT 2 cut(s) 504, 714
CseI GACGC 1 cut(s) 349
Csp6I GTAC 2 cut(s) 199, 232
CviAII CATG 3 cut(s) 235, 676, 803
CviJI RGCY 7 cut(s) 23, 272, 293, 423, 560, 583, 606
CviKI_1 RGCY 7 cut(s) 23, 272, 293, 423, 560, 583, 606
CviQI GTAC 2 cut(s) 199, 232
DdeI CTNAG 2 cut(s) 402, 525
DpnI GATC 3 cut(s) 350, 414, 717
DpnII GATC 3 cut(s) 348, 412, 715
EaeI YGGCCR 1 cut(s) 581
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Ecl136II GAGCTC 1 cut(s) 23
Eco130I CCWWGG 3 cut(s) 9, 418, 785
Eco24I GRGCYC 1 cut(s) 25
Eco31I GGTCTC 1 cut(s) 285
Eco47I GGWCC 1 cut(s) 435
Eco53kI GAGCTC 1 cut(s) 23
Eco81I CCTNAGG 2 cut(s) 402, 525
EcoICRI GAGCTC 1 cut(s) 23
EcoRII CCWGG 2 cut(s) 29, 431
EcoT14I CCWWGG 3 cut(s) 9, 418, 785
EcoT38I GRGCYC 1 cut(s) 25
ErhI CCWWGG 3 cut(s) 9, 418, 785
FaeI CATG 3 cut(s) 238, 679, 806
FatI CATG 3 cut(s) 234, 675, 802
Fnu4HI GCNGC 1 cut(s) 791
FokI GGATG 1 cut(s) 499
FriOI GRGCYC 1 cut(s) 25
Fsp4HI GCNGC 1 cut(s) 791
FspBI CTAG 1 cut(s) 847
GlaI GCGC 1 cut(s) 768
GluI GCNGC 1 cut(s) 791
HaeIII GGCC 2 cut(s) 272, 583
HapII CCGG 4 cut(s) 227, 268, 287, 310
HgaI GACGC 1 cut(s) 349
HhaI GCGC 1 cut(s) 769
Hin1II CATG 3 cut(s) 238, 679, 806
Hin6I GCGC 1 cut(s) 767
HinP1I GCGC 1 cut(s) 767
HindIII AAGCTT 1 cut(s) 291
HinfI GANTC 4 cut(s) 4, 97, 453, 762
HpaII CCGG 4 cut(s) 227, 268, 287, 310
HphI GGTGA 3 cut(s) 697, 713, 806
Hpy166II GTNNAC 1 cut(s) 438
Hpy188I TCNGA 1 cut(s) 192
Hpy188III TCNNGA 2 cut(s) 527, 821
Hpy8I GTNNAC 1 cut(s) 438
HpyAV CCTTC 3 cut(s) 8, 150, 232
HpyCH4III ACNGT 1 cut(s) 800
HpyCH4IV ACGT 1 cut(s) 333
HpyCH4V TGCA 2 cut(s) 131, 542
HpyF10VI GCNNNNNNNGC 2 cut(s) 636, 766
HpyF3I CTNAG 2 cut(s) 402, 525
HpySE526I ACGT 1 cut(s) 333
Hsp92II CATG 3 cut(s) 238, 679, 806
HspAI GCGC 1 cut(s) 767
Kzo9I GATC 3 cut(s) 348, 412, 715
LmnI GCTCC 2 cut(s) 20, 684
LweI GCATC 3 cut(s) 551, 563, 711
MaeI CTAG 1 cut(s) 847
MaeII ACGT 1 cut(s) 333
MaeIII GTNAC 4 cut(s) 116, 454, 653, 821
MalI GATC 3 cut(s) 350, 414, 717
MboI GATC 3 cut(s) 348, 412, 715
MflI RGATCY 1 cut(s) 412
MhlI GDGCHC 1 cut(s) 25
MlsI TGGCCA 1 cut(s) 583
MluCI AATT 6 cut(s) 90, 259, 385, 472, 496, 536
MluNI TGGCCA 1 cut(s) 583
MlyI GAGTC 3 cut(s) 13, 462, 756
MmeI TCCRAC 1 cut(s) 372
Mox20I TGGCCA 1 cut(s) 583
MscI TGGCCA 1 cut(s) 583
MseI TTAA 3 cut(s) 93, 141, 668
MslI CAYNNNNRTG 2 cut(s) 447, 819
Msp20I TGGCCA 1 cut(s) 583
MspI CCGG 4 cut(s) 227, 268, 287, 310
MspR9I CCNGG 5 cut(s) 31, 228, 269, 287, 433
MvaI CCWGG 2 cut(s) 31, 433
MvnI CGCG 1 cut(s) 767
MwoI GCNNNNNNNGC 2 cut(s) 636, 766
NciI CCSGG 3 cut(s) 228, 269, 287
NdeII GATC 3 cut(s) 348, 412, 715
NlaIII CATG 3 cut(s) 238, 679, 806
NmuCI GTSAC 3 cut(s) 454, 653, 821
OliI CACNNNNGTG 1 cut(s) 819
PfeI GAWTC 1 cut(s) 97
PfoI TCCNGGA 1 cut(s) 285
PkrI GCNGC 1 cut(s) 792
PleI GAGTC 3 cut(s) 12, 461, 756
PpsI GAGTC 3 cut(s) 12, 461, 756
Psp124BI GAGCTC 1 cut(s) 25
Psp1406I AACGTT 1 cut(s) 333
Psp6I CCWGG 2 cut(s) 29, 431
PspGI CCWGG 2 cut(s) 29, 431
PspPI GGNCC 2 cut(s) 270, 435
PstI CTGCAG 1 cut(s) 133
PsuI RGATCY 1 cut(s) 412
RsaI GTAC 2 cut(s) 200, 233
RsaNI GTAC 2 cut(s) 199, 232
RseI CAYNNNNRTG 2 cut(s) 447, 819
SacI GAGCTC 1 cut(s) 25
SaqAI TTAA 3 cut(s) 93, 141, 668
SatI GCNGC 1 cut(s) 791
Sau3AI GATC 3 cut(s) 348, 412, 715
Sau96I GGNCC 2 cut(s) 270, 435
SchI GAGTC 3 cut(s) 13, 462, 756
ScrFI CCNGG 5 cut(s) 31, 228, 269, 287, 433
SduI GDGCHC 1 cut(s) 25
SfaNI GCATC 3 cut(s) 551, 563, 711
SfcI CTRYAG 1 cut(s) 129
SinI GGWCC 1 cut(s) 435
SmiMI CAYNNNNRTG 2 cut(s) 447, 819
SmlI CTYRAG 1 cut(s) 625
SmoI CTYRAG 1 cut(s) 625
Sse9I AATT 6 cut(s) 90, 259, 385, 472, 496, 536
SsiI CCGC 4 cut(s) 196, 410, 685, 790
SspI AATATT 1 cut(s) 139
SspMI CTAG 1 cut(s) 847
SstI GAGCTC 1 cut(s) 25
StyD4I CCNGG 5 cut(s) 29, 226, 267, 285, 431
StyI CCWWGG 3 cut(s) 9, 418, 785
TaaI ACNGT 1 cut(s) 800
TaiI ACGT 1 cut(s) 336
TaqI TCGA 2 cut(s) 504, 714
TasI AATT 6 cut(s) 90, 259, 385, 472, 496, 536
TauI GCSGC 1 cut(s) 793
TfiI GAWTC 1 cut(s) 97
Tru1I TTAA 3 cut(s) 93, 141, 668
Tru9I TTAA 3 cut(s) 93, 141, 668
TseFI GTSAC 3 cut(s) 454, 653, 821
Tsp45I GTSAC 3 cut(s) 454, 653, 821
TspDTI ATGAA 5 cut(s) 33, 241, 251, 466, 767
TspGWI ACGGA 1 cut(s) 104
VpaK11BI GGWCC 1 cut(s) 435
XapI RAATTY 3 cut(s) 385, 496, 536
XspI CTAG 1 cut(s) 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.