RchiOBHm_Chr2g0087501

Adiponectin receptor protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0008678
Physical Location & Seq
Forward (+)
2211086 .. 2213613
2528 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46295

Sequence Viewer

Length: 1224 bp
ATGAGTCCCGGGGAAGGAGGAGGAGGAGCTGCTGTAAATTTCAGGAAGAGATCAAAACGACGGTCAAACAATGCCGCCGGAGCTACGAAAGATCAACCCCAAAACCATGAAGATAGTTGTTATTACCAGTCATCTTCTTCGTCGTCCTCTTCGGCTTCTAATTATGAGAGCAAGAAGAAGAGGATTAGGAAGAAGAAGGGTAAAGGGAACAACAACAACGTTAGGGGGTCGTCGAAACGGTTCGAGCTGATGTCGTATTGGGAGTTGCCGGAATATATGAAGGATAACGAGTTCATTTTGAATTATTACCGAGCTGATTGGCCTGTTCTCGAAGCTCTTTTCAGCGTTTTCCGTTGGCATAATGAAACTCTCAACGTTTGGACGCATTTGATTGGGTTTGTTCTGTTTGTGGGTTTGACTATGGCGAATTTGTGGGAAGTGCCTCAGGTAGCGGATCTCCTTGGCTTTTTTAACAGGTCCACATTTAGTGCAGCTGCAAATGTTTCCCATAATTTTAGTGCGGAGACAACAAACTTTGTTCATGATTTGAAGCAAATAACATCTCAGGAAATGAACAACATTGCATCGCCTGGTGATCGATTGAGCGTGGCACTTTGGCCGTTTTATGTGTTCCTAGCTGGCTCTATGTTCTGCCTTCTCTCCAGCAGCATTTGCCATCTCTTTTCATGCCACTCTCACCCCTTAAACGTCTTGCTCTTGCGCATAGATTACGCAGGCATCACCACCATGATCATCACCTCATTTTTCCCTCCGATTTACTACATCTTCCAATGTGATCCGCGCTGGCAATTCATTTACCTCGGCGGCATCACACTAATGGGAATTTGCACCATCATCACACTGTTCTCCCCGAAGCTTTCTAGCTCCAAATTTAGAACATTTCGAGCTTTGCTTTTTGCTTCACTGGGGTTGTTTGGGATTGTGCCTGCAGTCCATGCCAGCGTTGTGAATTGGGGCAATCCGAAGCGTGATATCACTCTGGTTTATGAGGTTGCCATGGCGCTTTTCTATTTGACAGGGACCGGATTTTACATCACTCGAATTCCCGAGAGATGGAGACCGGGGTGCTTCGATTTGGCAGGTCACAGCCATCAGATTTTTCATGTTTTGGTGGTGATGGGTGCATTGGCTCATTATGCTGCCATACTTGTAATGCTAGACTGGCGAAGCACCTTGGGGTGTGACATCAATATTACTCTGTAA

Protein Analysis

407

Amino Acids

45.95

Weight (kDa)

9.18

Isoelectric Point (pI)

57.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HlyIII PF03006 117 - 386 4.8e-61 Haemolysin-III related
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 722
Acc36I ACCTGC 1 cut(s) 1091
AccII CGCG 1 cut(s) 802
AciI CCGC 5 cut(s) 75, 452, 521, 800, 825
AclI AACGTT 2 cut(s) 219, 375
AclWI GGATC 2 cut(s) 462, 791
AcoI YGGCCR 1 cut(s) 617
AcsI RAATTY 5 cut(s) 37, 427, 843, 890, 1062
AfiI CCNNNNNNNGG 2 cut(s) 14, 1074
AgsI TTSAA 2 cut(s) 301, 550
AjnI CCWGG 1 cut(s) 589
AloI GAACNNNNNNTCC 2 cut(s) 275, 307
Alw26I GTCTC 2 cut(s) 518, 1072
AlwI GGATC 2 cut(s) 462, 791
Ama87I CYCGRG 2 cut(s) 8, 1067
AoxI GGCC 2 cut(s) 320, 617
ApeKI GCWGC 5 cut(s) 29, 491, 494, 666, 1160
ApoI RAATTY 5 cut(s) 37, 427, 843, 890, 1062
ArsI GACNNNNNNTTYG 2 cut(s) 47, 79
Asp700I GAANNNNTTC 1 cut(s) 239
AspLEI GCGC 3 cut(s) 723, 804, 1024
AspS9I GGNCC 2 cut(s) 477, 1041
AsuC2I CCSGG 3 cut(s) 9, 10, 1083
AsuHPI GGTGA 5 cut(s) 605, 689, 733, 748, 1147
AvaI CYCGRG 2 cut(s) 8, 1067
AvaII GGWCC 2 cut(s) 477, 1041
AxyI CCTNAGG 1 cut(s) 444
BbvI GCAGC 5 cut(s) 16, 481, 503, 678, 1147
BccI CCATC 5 cut(s) 684, 860, 1068, 1119, 1132
BceAI ACGGC 1 cut(s) 604
BciT130I CCWGG 1 cut(s) 591
BclI TGATCA 1 cut(s) 750
BcnI CCSGG 3 cut(s) 9, 10, 1083
BcoDI GTCTC 2 cut(s) 518, 1072
BfaI CTAG 3 cut(s) 635, 882, 1178
BfmI CTRYAG 1 cut(s) 948
BfoI RGCGCY 1 cut(s) 1025
BfuAI ACCTGC 1 cut(s) 1091
BisI GCNGC 7 cut(s) 30, 75, 492, 495, 667, 826, 1161
BlsI GCNGC 7 cut(s) 31, 76, 493, 496, 668, 827, 1162
Bme1390I CCNGG 4 cut(s) 9, 10, 591, 1083
Bme18I GGWCC 2 cut(s) 477, 1041
BmeT110I CYCGRG 2 cut(s) 8, 1067
BmgT120I GGNCC 2 cut(s) 477, 1041
BmiI GGNNCC 1 cut(s) 1042
BmrFI CCNGG 4 cut(s) 9, 10, 591, 1083
BmrI ACTGGG 1 cut(s) 935
BmsI GCATC 3 cut(s) 593, 747, 837
BmuI ACTGGG 1 cut(s) 935
BpmI CTGGAG 1 cut(s) 646
BpuMI CCSGG 3 cut(s) 9, 10, 1083
Bsa29I ATCGAT 1 cut(s) 598
BsaI GGTCTC 1 cut(s) 1072
BsaJI CCNNGG 7 cut(s) 8, 9, 460, 820, 1017, 1082, 1194
BsaWI WCCGGW 1 cut(s) 1043
BsaXI ACNNNNNCTCC 2 cut(s) 18, 48
Bsc4I CCNNNNNNNGG 2 cut(s) 14, 1074
Bse1I ACTGG 3 cut(s) 127, 930, 1187
Bse21I CCTNAGG 1 cut(s) 444
Bse3DI GCAATG 1 cut(s) 579
BseBI CCWGG 1 cut(s) 591
BseCI ATCGAT 1 cut(s) 598
BseDI CCNNGG 7 cut(s) 8, 9, 460, 820, 1017, 1082, 1194
BseLI CCNNNNNNNGG 2 cut(s) 14, 1074
BseMI GCAATG 1 cut(s) 579
BseMII CTCAG 2 cut(s) 458, 578
BseNI ACTGG 3 cut(s) 127, 930, 1187
BseRI GAGGAG 3 cut(s) 33, 36, 39
BseXI GCAGC 5 cut(s) 16, 481, 503, 678, 1147
BsgI GTGCAG 1 cut(s) 510
Bsh1236I CGCG 1 cut(s) 802
BshFI GGCC 2 cut(s) 322, 619
BshVI ATCGAT 1 cut(s) 598
BsiHKCI CYCGRG 2 cut(s) 8, 1067
BsiSI CCGG 5 cut(s) 9, 78, 269, 1044, 1082
BslFI GGGAC 1 cut(s) 1054
BslI CCNNNNNNNGG 2 cut(s) 14, 1074
BsmAI GTCTC 2 cut(s) 518, 1072
BsmFI GGGAC 1 cut(s) 1054
BsnI GGCC 2 cut(s) 322, 619
Bso31I GGTCTC 1 cut(s) 1072
BsoBI CYCGRG 2 cut(s) 8, 1067
Bsp143I GATC 6 cut(s) 50, 91, 454, 595, 750, 796
Bsp19I CCATGG 1 cut(s) 1017
BspACI CCGC 5 cut(s) 75, 452, 521, 800, 825
BspANI GGCC 2 cut(s) 322, 619
BspCNI CTCAG 2 cut(s) 457, 577
BspDI ATCGAT 1 cut(s) 598
BspFNI CGCG 1 cut(s) 802
BspHI TCATGA 1 cut(s) 541
BspLI GGNNCC 1 cut(s) 1042
BspMAI CTGCAG 1 cut(s) 952
BspMI ACCTGC 1 cut(s) 1091
BspPI GGATC 2 cut(s) 462, 791
BspTNI GGTCTC 1 cut(s) 1072
BsrDI GCAATG 1 cut(s) 579
BsrI ACTGG 3 cut(s) 127, 930, 1187
BssECI CCNNGG 7 cut(s) 8, 9, 460, 820, 1017, 1082, 1194
BssMI GATC 6 cut(s) 50, 91, 454, 595, 750, 796
BssT1I CCWWGG 3 cut(s) 460, 1017, 1194
Bst2UI CCWGG 1 cut(s) 591
Bst4CI ACNGT 3 cut(s) 63, 240, 864
Bst6I CTCTTC 3 cut(s) 41, 154, 173
BstAPI GCANNNNNTGC 2 cut(s) 672, 956
BstC8I GCNNGC 5 cut(s) 640, 736, 806, 948, 961
BstDEI CTNAG 2 cut(s) 444, 564
BstDSI CCRYGG 1 cut(s) 1017
BstFNI CGCG 1 cut(s) 802
BstH2I RGCGCY 1 cut(s) 1025
BstHHI GCGC 3 cut(s) 723, 804, 1024
BstKTI GATC 6 cut(s) 53, 94, 457, 598, 753, 799
BstMAI GTCTC 2 cut(s) 518, 1072
BstMBI GATC 6 cut(s) 50, 91, 454, 595, 750, 796
BstMWI GCNNNNNNNGC 5 cut(s) 80, 672, 956, 1157, 1183
BstNI CCWGG 1 cut(s) 591
BstSCI CCNGG 4 cut(s) 7, 8, 589, 1081
BstSFI CTRYAG 1 cut(s) 948
BstUI CGCG 1 cut(s) 802
BstV1I GCAGC 5 cut(s) 16, 481, 503, 678, 1147
BstX2I RGATCY 1 cut(s) 454
BstYI RGATCY 1 cut(s) 454
Bsu15I ATCGAT 1 cut(s) 598
Bsu36I CCTNAGG 1 cut(s) 444
BsuRI GGCC 2 cut(s) 322, 619
BsuTUI ATCGAT 1 cut(s) 598
BtgI CCRYGG 1 cut(s) 1017
BtgZI GCGATG 1 cut(s) 570
BtsIMutI CAGTG 2 cut(s) 860, 923
BveI ACCTGC 1 cut(s) 1091
Cac8I GCNNGC 5 cut(s) 640, 736, 806, 948, 961
CciI TCATGA 1 cut(s) 541
CfoI GCGC 3 cut(s) 723, 804, 1024
Cfr13I GGNCC 2 cut(s) 477, 1041
Cfr9I CCCGGG 1 cut(s) 8
ClaI ATCGAT 1 cut(s) 598
CseI GACGC 1 cut(s) 391
CviAII CATG 7 cut(s) 107, 542, 687, 748, 956, 1018, 1124
DdeI CTNAG 2 cut(s) 444, 564
DpnI GATC 6 cut(s) 52, 93, 456, 597, 752, 798
DpnII GATC 6 cut(s) 50, 91, 454, 595, 750, 796
EaeI YGGCCR 1 cut(s) 617
Eam1104I CTCTTC 3 cut(s) 41, 154, 173
EarI CTCTTC 3 cut(s) 41, 154, 173
Eco130I CCWWGG 3 cut(s) 460, 1017, 1194
Eco31I GGTCTC 1 cut(s) 1072
Eco32I GATATC 1 cut(s) 994
Eco47I GGWCC 2 cut(s) 477, 1041
Eco81I CCTNAGG 1 cut(s) 444
Eco88I CYCGRG 2 cut(s) 8, 1067
EcoRI GAATTC 1 cut(s) 1062
EcoRII CCWGG 1 cut(s) 589
EcoRV GATATC 1 cut(s) 994
EcoT14I CCWWGG 3 cut(s) 460, 1017, 1194
ErhI CCWWGG 3 cut(s) 460, 1017, 1194
FaeI CATG 7 cut(s) 110, 545, 690, 751, 959, 1021, 1127
FaqI GGGAC 1 cut(s) 1054
FatI CATG 7 cut(s) 106, 541, 686, 747, 955, 1017, 1123
FbaI TGATCA 1 cut(s) 750
Fnu4HI GCNGC 7 cut(s) 30, 75, 492, 495, 667, 826, 1161
Fsp4HI GCNGC 7 cut(s) 30, 75, 492, 495, 667, 826, 1161
FspBI CTAG 3 cut(s) 635, 882, 1178
FspI TGCGCA 1 cut(s) 722
GlaI GCGC 3 cut(s) 722, 803, 1023
GluI GCNGC 7 cut(s) 30, 75, 492, 495, 667, 826, 1161
GsuI CTGGAG 1 cut(s) 646
HaeII RGCGCY 1 cut(s) 1025
HaeIII GGCC 2 cut(s) 322, 619
HapII CCGG 5 cut(s) 9, 78, 269, 1044, 1082
HgaI GACGC 1 cut(s) 391
HhaI GCGC 3 cut(s) 723, 804, 1024
Hin1II CATG 7 cut(s) 110, 545, 690, 751, 959, 1021, 1127
Hin6I GCGC 3 cut(s) 721, 802, 1022
HinP1I GCGC 3 cut(s) 721, 802, 1022
HindIII AAGCTT 1 cut(s) 875
HinfI GANTC 1 cut(s) 4
HpaII CCGG 5 cut(s) 9, 78, 269, 1044, 1082
HphI GGTGA 5 cut(s) 605, 689, 733, 748, 1147
Hpy166II GTNNAC 1 cut(s) 480
Hpy188I TCNGA 3 cut(s) 774, 984, 1116
Hpy188III TCNNGA 5 cut(s) 43, 329, 542, 566, 1067
Hpy8I GTNNAC 1 cut(s) 480
Hpy99I CGWCG 3 cut(s) 63, 145, 235
HpyAV CCTTC 4 cut(s) 8, 190, 274, 665
HpyCH4III ACNGT 3 cut(s) 63, 240, 864
HpyCH4IV ACGT 3 cut(s) 219, 375, 708
HpyCH4V TGCA 6 cut(s) 491, 497, 584, 849, 950, 1145
HpyF10VI GCNNNNNNNGC 5 cut(s) 80, 672, 956, 1157, 1183
HpyF3I CTNAG 2 cut(s) 444, 564
HpySE526I ACGT 3 cut(s) 219, 375, 708
Hsp92II CATG 7 cut(s) 110, 545, 690, 751, 959, 1021, 1127
HspAI GCGC 3 cut(s) 721, 802, 1022
Ksp22I TGATCA 1 cut(s) 750
Kzo9I GATC 6 cut(s) 50, 91, 454, 595, 750, 796
LmnI GCTCC 3 cut(s) 26, 80, 890
Lsp1109I GCAGC 5 cut(s) 16, 481, 503, 678, 1147
LweI GCATC 3 cut(s) 593, 747, 837
MaeI CTAG 3 cut(s) 635, 882, 1178
MaeII ACGT 3 cut(s) 219, 375, 708
MaeIII GTNAC 2 cut(s) 1103, 1202
MalI GATC 6 cut(s) 52, 93, 456, 597, 752, 798
MboI GATC 6 cut(s) 50, 91, 454, 595, 750, 796
MflI RGATCY 1 cut(s) 454
MlyI GAGTC 1 cut(s) 13
MroXI GAANNNNTTC 1 cut(s) 239
MseI TTAA 2 cut(s) 471, 704
MslI CAYNNNNRTG 2 cut(s) 746, 836
MspA1I CMGCKG 1 cut(s) 494
MspI CCGG 5 cut(s) 9, 78, 269, 1044, 1082
MspR9I CCNGG 4 cut(s) 9, 10, 591, 1083
MvaI CCWGG 1 cut(s) 591
MvnI CGCG 1 cut(s) 802
MwoI GCNNNNNNNGC 5 cut(s) 80, 672, 956, 1157, 1183
NciI CCSGG 3 cut(s) 9, 10, 1083
NcoI CCATGG 1 cut(s) 1017
NdeII GATC 6 cut(s) 50, 91, 454, 595, 750, 796
NlaIII CATG 7 cut(s) 110, 545, 690, 751, 959, 1021, 1127
NlaIV GGNNCC 1 cut(s) 1042
NmeAIII GCCGAG 1 cut(s) 801
NmuCI GTSAC 2 cut(s) 1103, 1202
NsbI TGCGCA 1 cut(s) 722
PagI TCATGA 1 cut(s) 541
PdmI GAANNNNTTC 1 cut(s) 239
PkrI GCNGC 7 cut(s) 31, 76, 493, 496, 668, 827, 1162
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
Psp1406I AACGTT 2 cut(s) 219, 375
Psp6I CCWGG 1 cut(s) 589
PspGI CCWGG 1 cut(s) 589
PspN4I GGNNCC 1 cut(s) 1042
PspPI GGNCC 2 cut(s) 477, 1041
PstI CTGCAG 1 cut(s) 952
PsuI RGATCY 1 cut(s) 454
PvuII CAGCTG 1 cut(s) 494
RseI CAYNNNNRTG 2 cut(s) 746, 836
SaqAI TTAA 2 cut(s) 471, 704
SatI GCNGC 7 cut(s) 30, 75, 492, 495, 667, 826, 1161
Sau3AI GATC 6 cut(s) 50, 91, 454, 595, 750, 796
Sau96I GGNCC 2 cut(s) 477, 1041
SchI GAGTC 1 cut(s) 13
ScrFI CCNGG 4 cut(s) 9, 10, 591, 1083
SfaNI GCATC 3 cut(s) 593, 747, 837
SfcI CTRYAG 1 cut(s) 948
SinI GGWCC 2 cut(s) 477, 1041
SmaI CCCGGG 1 cut(s) 10
SmiMI CAYNNNNRTG 2 cut(s) 746, 836
SsiI CCGC 5 cut(s) 75, 452, 521, 800, 825
SspI AATATT 1 cut(s) 1213
SspMI CTAG 3 cut(s) 635, 882, 1178
StyD4I CCNGG 4 cut(s) 7, 8, 589, 1081
StyI CCWWGG 3 cut(s) 460, 1017, 1194
TaaI ACNGT 3 cut(s) 63, 240, 864
TaiI ACGT 3 cut(s) 222, 378, 711
TaqI TCGA 7 cut(s) 233, 243, 330, 598, 904, 1060, 1092
TauI GCSGC 2 cut(s) 77, 828
Tru1I TTAA 2 cut(s) 471, 704
Tru9I TTAA 2 cut(s) 471, 704
TscAI CASTG 2 cut(s) 867, 930
TseFI GTSAC 2 cut(s) 1103, 1202
TseI GCWGC 5 cut(s) 29, 491, 494, 666, 1160
Tsp45I GTSAC 2 cut(s) 1103, 1202
TspDTI ATGAA 9 cut(s) 123, 283, 293, 378, 530, 587, 675, 802, 1112
TspGWI ACGGA 1 cut(s) 341
TspMI CCCGGG 1 cut(s) 8
TspRI CASTG 2 cut(s) 867, 930
VpaK11BI GGWCC 2 cut(s) 477, 1041
XapI RAATTY 5 cut(s) 37, 427, 843, 890, 1062
XmaI CCCGGG 1 cut(s) 8
XmnI GAANNNNTTC 1 cut(s) 239
XspI CTAG 3 cut(s) 635, 882, 1178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.