Splicing factor U2af large subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G18520 AT4G36680 |
| fragaria_vesca | FvH4_1g13650 |
| malus_domestica | MD02G1151200.v1.1 MD15G1265700.v1.1 |
| prunus_persica | Prupe.7G151800_v2.0.a1 |
| pyrus_communis | pycom02g11870 pycom15g23140 |
| rosa_chinensis | RchiOBHm_Chr2g0102001 |
| rosa_laevigata | RLG00000017125 |
| rosa_multiflora | Rmu_co8487067.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00140840 |
| rosa_samantha | Rh2AG151900 Rh2BG157300 Rh2CG157300 Rh2DG157400 |
| rosa_wichuraiana | Rw2G011860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2562 |
| AccB1I | GGYRCC | 4 cut(s) | 50, 104, 604, 1385 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 859 |
| AccI | GTMKAC | 3 cut(s) | 912, 1910, 2356 |
| AccII | CGCG | 5 cut(s) | 357, 390, 1621, 2166, 2597 |
| AclWI | GGATC | 6 cut(s) | 246, 324, 360, 393, 2043, 2148 |
| AcoI | YGGCCR | 4 cut(s) | 1720, 1777, 2161, 2232 |
| AcsI | RAATTY | 4 cut(s) | 657, 932, 1727, 2310 |
| AcuI | CTGAAG | 2 cut(s) | 2907, 3015 |
| AcyI | GRCGYC | 2 cut(s) | 2050, 2328 |
| AfaI | GTAC | 8 cut(s) | 26, 442, 797, 1023, 1708, 1955, 2221, 2480 |
| AfeI | AGCGCT | 1 cut(s) | 1329 |
| AflIII | ACRYGT | 1 cut(s) | 699 |
| AgeI | ACCGGT | 1 cut(s) | 716 |
| AhlI | ACTAGT | 1 cut(s) | 668 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1652, 1684 |
| AleI | CACNNNNGTG | 2 cut(s) | 102, 2447 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1796, 1828 |
| Alw21I | GWGCWC | 1 cut(s) | 537 |
| AlwI | GGATC | 6 cut(s) | 246, 324, 360, 393, 2043, 2148 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1685 |
| Ama87I | CYCGRG | 3 cut(s) | 444, 1208, 2390 |
| Aor51HI | AGCGCT | 1 cut(s) | 1329 |
| AoxI | GGCC | 7 cut(s) | 886, 1141, 1720, 1777, 2161, 2232, 2919 |
| ApaI | GGGCCC | 1 cut(s) | 1145 |
| ApoI | RAATTY | 4 cut(s) | 657, 932, 1727, 2310 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 815, 847, 1139, 1171 |
| AsiGI | ACCGGT | 1 cut(s) | 716 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2279, 2951 |
| AspLEI | GCGC | 3 cut(s) | 1330, 2168, 2597 |
| AspS9I | GGNCC | 9 cut(s) | 244, 340, 887, 1067, 1141, 1142, 1220, 2193, 2209 |
| AsuC2I | CCSGG | 7 cut(s) | 248, 344, 445, 446, 1119, 1650, 2638 |
| AsuHPI | GGTGA | 8 cut(s) | 1649, 2032, 2113, 2449, 2461, 2539, 2641, 2908 |
| AsuII | TTCGAA | 2 cut(s) | 2273, 2770 |
| AsuNHI | GCTAGC | 1 cut(s) | 968 |
| AvaI | CYCGRG | 3 cut(s) | 444, 1208, 2390 |
| AvaII | GGWCC | 6 cut(s) | 244, 340, 1067, 1220, 2193, 2209 |
| BaeGI | GKGCMC | 1 cut(s) | 1145 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 424, 457 |
| BanI | GGYRCC | 4 cut(s) | 50, 104, 604, 1385 |
| BanII | GRGCYC | 2 cut(s) | 1012, 1145 |
| BauI | CACGAG | 2 cut(s) | 84, 144 |
| BbsI | GAAGAC | 2 cut(s) | 1572, 3021 |
| Bbv12I | GWGCWC | 1 cut(s) | 537 |
| BbvCI | CCTCAGC | 1 cut(s) | 2411 |
| BceAI | ACGGC | 6 cut(s) | 77, 79, 115, 2116, 2176, 2247 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 125, 159 |
| BciVI | GTATCC | 1 cut(s) | 2644 |
| BclI | TGATCA | 2 cut(s) | 430, 2200 |
| BcnI | CCSGG | 7 cut(s) | 248, 344, 445, 446, 1119, 1650, 2638 |
| BcuI | ACTAGT | 1 cut(s) | 668 |
| BfaI | CTAG | 6 cut(s) | 525, 669, 777, 969, 1032, 2999 |
| BfmI | CTRYAG | 3 cut(s) | 645, 1521, 3060 |
| BfoI | RGCGCY | 1 cut(s) | 1331 |
| BfuI | GTATCC | 1 cut(s) | 2644 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2169 |
| BglII | AGATCT | 1 cut(s) | 527 |
| Bme18I | GGWCC | 6 cut(s) | 244, 340, 1067, 1220, 2193, 2209 |
| BmeT110I | CYCGRG | 3 cut(s) | 444, 1208, 2390 |
| BmgT120I | GGNCC | 9 cut(s) | 244, 340, 887, 1067, 1141, 1142, 1220, 2193, 2209 |
| BmsI | GCATC | 3 cut(s) | 886, 1199, 2539 |
| BmtI | GCTAGC | 1 cut(s) | 972 |
| BpiI | GAAGAC | 2 cut(s) | 1572, 3021 |
| BpmI | CTGGAG | 1 cut(s) | 1958 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1404, 1532, 2411 |
| Bpu14I | TTCGAA | 2 cut(s) | 2273, 2770 |
| BpuEI | CTTGAG | 1 cut(s) | 1157 |
| BpuMI | CCSGG | 7 cut(s) | 248, 344, 445, 446, 1119, 1650, 2638 |
| Bsa29I | ATCGAT | 1 cut(s) | 1193 |
| BsaBI | GATNNNNATC | 3 cut(s) | 315, 357, 363 |
| BsaHI | GRCGYC | 2 cut(s) | 2050, 2328 |
| BsaI | GGTCTC | 2 cut(s) | 366, 1021 |
| BsaWI | WCCGGW | 2 cut(s) | 716, 2647 |
| Bse118I | RCCGGY | 2 cut(s) | 716, 2168 |
| Bse1I | ACTGG | 2 cut(s) | 740, 3025 |
| Bse3DI | GCAATG | 6 cut(s) | 627, 765, 979, 984, 1445, 2497 |
| Bse8I | GATNNNNATC | 3 cut(s) | 315, 357, 363 |
| BseCI | ATCGAT | 1 cut(s) | 1193 |
| BseGI | GGATG | 6 cut(s) | 693, 994, 1614, 2148, 2524, 2703 |
| BseJI | GATNNNNATC | 3 cut(s) | 315, 357, 363 |
| BseMI | GCAATG | 6 cut(s) | 627, 765, 979, 984, 1445, 2497 |
| BseMII | CTCAG | 5 cut(s) | 146, 522, 1395, 1523, 2402 |
| BseNI | ACTGG | 2 cut(s) | 740, 3025 |
| BseRI | GAGGAG | 2 cut(s) | 2438, 3059 |
| BseSI | GKGCMC | 1 cut(s) | 1145 |
| BseX3I | CGGCCG | 1 cut(s) | 2161 |
| BseYI | CCCAGC | 3 cut(s) | 2215, 2295, 2992 |
| BsgI | GTGCAG | 1 cut(s) | 1344 |
| Bsh1236I | CGCG | 5 cut(s) | 357, 390, 1621, 2166, 2597 |
| Bsh1285I | CGRYCG | 2 cut(s) | 361, 2164 |
| BshFI | GGCC | 7 cut(s) | 888, 1143, 1722, 1779, 2163, 2234, 2921 |
| BshNI | GGYRCC | 4 cut(s) | 50, 104, 604, 1385 |
| BshTI | ACCGGT | 1 cut(s) | 716 |
| BshVI | ATCGAT | 1 cut(s) | 1193 |
| BsiEI | CGRYCG | 2 cut(s) | 361, 2164 |
| BsiHKAI | GWGCWC | 1 cut(s) | 537 |
| BsiHKCI | CYCGRG | 3 cut(s) | 444, 1208, 2390 |
| BsiWI | CGTACG | 1 cut(s) | 1706 |
| BsmBI | CGTCTC | 4 cut(s) | 1996, 2025, 2335, 2399 |
| BsmI | GAATGC | 2 cut(s) | 2638, 2761 |
| BsnI | GGCC | 7 cut(s) | 888, 1143, 1722, 1779, 2163, 2234, 2921 |
| Bso31I | GGTCTC | 2 cut(s) | 366, 1021 |
| BsoBI | CYCGRG | 3 cut(s) | 444, 1208, 2390 |
| Bsp119I | TTCGAA | 2 cut(s) | 2273, 2770 |
| Bsp120I | GGGCCC | 1 cut(s) | 1141 |
| Bsp1286I | GDGCHC | 3 cut(s) | 537, 1012, 1145 |
| Bsp1407I | TGTACA | 1 cut(s) | 2478 |
| Bsp19I | CCATGG | 1 cut(s) | 2584 |
| Bsp68I | TCGCGA | 2 cut(s) | 357, 390 |
| BspANI | GGCC | 7 cut(s) | 888, 1143, 1722, 1779, 2163, 2234, 2921 |
| BspCNI | CTCAG | 5 cut(s) | 145, 523, 1396, 1522, 2403 |
| BspDI | ATCGAT | 1 cut(s) | 1193 |
| BspFNI | CGCG | 5 cut(s) | 357, 390, 1621, 2166, 2597 |
| BspMAI | CTGCAG | 2 cut(s) | 649, 1525 |
| BspOI | GCTAGC | 1 cut(s) | 972 |
| BspPI | GGATC | 6 cut(s) | 246, 324, 360, 393, 2043, 2148 |
| BspT104I | TTCGAA | 2 cut(s) | 2273, 2770 |
| BspT107I | GGYRCC | 4 cut(s) | 50, 104, 604, 1385 |
| BspTNI | GGTCTC | 2 cut(s) | 366, 1021 |
| BsrDI | GCAATG | 6 cut(s) | 627, 765, 979, 984, 1445, 2497 |
| BsrFI | RCCGGY | 2 cut(s) | 716, 2168 |
| BsrGI | TGTACA | 1 cut(s) | 2478 |
| BsrI | ACTGG | 2 cut(s) | 740, 3025 |
| BssAI | RCCGGY | 2 cut(s) | 716, 2168 |
| BssNAI | GTATAC | 1 cut(s) | 2357 |
| BssNI | GRCGYC | 2 cut(s) | 2050, 2328 |
| BssSI | CACGAG | 2 cut(s) | 84, 144 |
| BssT1I | CCWWGG | 4 cut(s) | 1381, 1491, 2584, 2922 |
| Bst1107I | GTATAC | 1 cut(s) | 2357 |
| Bst2BI | CACGAG | 2 cut(s) | 84, 144 |
| Bst4CI | ACNGT | 7 cut(s) | 440, 831, 881, 1337, 1366, 2044, 2069 |
| Bst6I | CTCTTC | 3 cut(s) | 957, 2011, 2493 |
| BstACI | GRCGYC | 2 cut(s) | 2050, 2328 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 611 |
| BstAUI | TGTACA | 1 cut(s) | 2478 |
| BstBI | TTCGAA | 2 cut(s) | 2273, 2770 |
| BstC8I | GCNNGC | 9 cut(s) | 49, 783, 886, 970, 1076, 1374, 1428, 2170, 2263 |
| BstDEI | CTNAG | 6 cut(s) | 132, 531, 1404, 1509, 1532, 2411 |
| BstDSI | CCRYGG | 2 cut(s) | 97, 2584 |
| BstF5I | GGATG | 6 cut(s) | 693, 994, 1614, 2148, 2524, 2703 |
| BstFNI | CGCG | 5 cut(s) | 357, 390, 1621, 2166, 2597 |
| BstH2I | RGCGCY | 1 cut(s) | 1331 |
| BstHHI | GCGC | 3 cut(s) | 1330, 2168, 2597 |
| BstMCI | CGRYCG | 2 cut(s) | 361, 2164 |
| BstNSI | RCATGY | 3 cut(s) | 703, 785, 2176 |
| BstSFI | CTRYAG | 3 cut(s) | 645, 1521, 3060 |
| BstSLI | GKGCMC | 1 cut(s) | 1145 |
| BstUI | CGCG | 5 cut(s) | 357, 390, 1621, 2166, 2597 |
| BstV2I | GAAGAC | 2 cut(s) | 1572, 3021 |
| BstX2I | RGATCY | 2 cut(s) | 527, 2035 |
| BstYI | RGATCY | 2 cut(s) | 527, 2035 |
| BstZ17I | GTATAC | 1 cut(s) | 2357 |
| BstZI | CGGCCG | 1 cut(s) | 2161 |
| Bsu15I | ATCGAT | 1 cut(s) | 1193 |
| BsuI | GTATCC | 1 cut(s) | 2644 |
| BsuRI | GGCC | 7 cut(s) | 888, 1143, 1722, 1779, 2163, 2234, 2921 |
| BsuTUI | ATCGAT | 1 cut(s) | 1193 |
| BtgI | CCRYGG | 2 cut(s) | 97, 2584 |
| BtgZI | GCGATG | 1 cut(s) | 2414 |
| BtsCI | GGATG | 6 cut(s) | 693, 994, 1614, 2148, 2524, 2703 |
| BtsI | GCAGTG | 2 cut(s) | 1758, 2442 |
| BtsIMutI | CAGTG | 3 cut(s) | 886, 1758, 2442 |
| BtuMI | TCGCGA | 2 cut(s) | 357, 390 |
| Cac8I | GCNNGC | 9 cut(s) | 49, 783, 886, 970, 1076, 1374, 1428, 2170, 2263 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1685 |
| CfoI | GCGC | 3 cut(s) | 1330, 2168, 2597 |
| Cfr10I | RCCGGY | 2 cut(s) | 716, 2168 |
| Cfr13I | GGNCC | 9 cut(s) | 244, 340, 887, 1067, 1141, 1142, 1220, 2193, 2209 |
| Cfr9I | CCCGGG | 1 cut(s) | 444 |
| ClaI | ATCGAT | 1 cut(s) | 1193 |
| CseI | GACGC | 7 cut(s) | 53, 1366, 1610, 2058, 2317, 2416, 3015 |
| Csp6I | GTAC | 8 cut(s) | 25, 441, 796, 1022, 1707, 1954, 2220, 2479 |
| CspAI | ACCGGT | 1 cut(s) | 716 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1477, 1512 |
| CviQI | GTAC | 8 cut(s) | 25, 441, 796, 1022, 1707, 1954, 2220, 2479 |
| DdeI | CTNAG | 6 cut(s) | 132, 531, 1404, 1509, 1532, 2411 |
| EaeI | YGGCCR | 4 cut(s) | 1720, 1777, 2161, 2232 |
| EagI | CGGCCG | 1 cut(s) | 2161 |
| Eam1104I | CTCTTC | 3 cut(s) | 957, 2011, 2493 |
| EarI | CTCTTC | 3 cut(s) | 957, 2011, 2493 |
| EciI | GGCGGA | 3 cut(s) | 1862, 1871, 2519 |
| EclXI | CGGCCG | 1 cut(s) | 2161 |
| Eco130I | CCWWGG | 4 cut(s) | 1381, 1491, 2584, 2922 |
| Eco24I | GRGCYC | 2 cut(s) | 1012, 1145 |
| Eco31I | GGTCTC | 2 cut(s) | 366, 1021 |
| Eco32I | GATATC | 1 cut(s) | 1558 |
| Eco47I | GGWCC | 6 cut(s) | 244, 340, 1067, 1220, 2193, 2209 |
| Eco47III | AGCGCT | 1 cut(s) | 1329 |
| Eco52I | CGGCCG | 1 cut(s) | 2161 |
| Eco57I | CTGAAG | 2 cut(s) | 2907, 3015 |
| Eco88I | CYCGRG | 3 cut(s) | 444, 1208, 2390 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1141, 1142, 2193 |
| EcoRV | GATATC | 1 cut(s) | 1558 |
| EcoT14I | CCWWGG | 4 cut(s) | 1381, 1491, 2584, 2922 |
| EcoT38I | GRGCYC | 2 cut(s) | 1012, 1145 |
| ErhI | CCWWGG | 4 cut(s) | 1381, 1491, 2584, 2922 |
| Esp3I | CGTCTC | 4 cut(s) | 1996, 2025, 2335, 2399 |
| FauI | CCCGC | 2 cut(s) | 1626, 2582 |
| FbaI | TGATCA | 2 cut(s) | 430, 2200 |
| FblI | GTMKAC | 3 cut(s) | 912, 1910, 2356 |
| FokI | GGATG | 6 cut(s) | 700, 1001, 1601, 2135, 2531, 2710 |
| FriOI | GRGCYC | 2 cut(s) | 1012, 1145 |
| FspBI | CTAG | 6 cut(s) | 525, 669, 777, 969, 1032, 2999 |
| GlaI | GCGC | 3 cut(s) | 1329, 2167, 2596 |
| GsaI | CCCAGC | 3 cut(s) | 2219, 2299, 2996 |
| GsuI | CTGGAG | 1 cut(s) | 1958 |
| HaeII | RGCGCY | 1 cut(s) | 1331 |
| HaeIII | GGCC | 7 cut(s) | 888, 1143, 1722, 1779, 2163, 2234, 2921 |
| HgaI | GACGC | 7 cut(s) | 53, 1366, 1610, 2058, 2317, 2416, 3015 |
| HhaI | GCGC | 3 cut(s) | 1330, 2168, 2597 |
| Hin1I | GRCGYC | 2 cut(s) | 2050, 2328 |
| Hin6I | GCGC | 3 cut(s) | 1328, 2166, 2595 |
| HinP1I | GCGC | 3 cut(s) | 1328, 2166, 2595 |
| HincII | GTYRAC | 1 cut(s) | 714 |
| HindII | GTYRAC | 1 cut(s) | 714 |
| HindIII | AAGCTT | 1 cut(s) | 2610 |
| HphI | GGTGA | 8 cut(s) | 1649, 2032, 2113, 2449, 2461, 2539, 2641, 2908 |
| Hpy99I | CGWCG | 8 cut(s) | 65, 113, 408, 425, 428, 792, 2052, 2309 |
| HpyCH4III | ACNGT | 7 cut(s) | 440, 831, 881, 1337, 1366, 2044, 2069 |
| HpyCH4IV | ACGT | 4 cut(s) | 556, 798, 1608, 2453 |
| HpyF3I | CTNAG | 6 cut(s) | 132, 531, 1404, 1509, 1532, 2411 |
| HpySE526I | ACGT | 4 cut(s) | 556, 798, 1608, 2453 |
| Hsp92I | GRCGYC | 2 cut(s) | 2050, 2328 |
| HspAI | GCGC | 3 cut(s) | 1328, 2166, 2595 |
| KroI | GCCGGC | 1 cut(s) | 2168 |
| KroNI | GCCGGC | 1 cut(s) | 2170 |
| Ksp22I | TGATCA | 2 cut(s) | 430, 2200 |
| LmnI | GCTCC | 5 cut(s) | 1007, 1947, 2128, 2592, 2989 |
| LweI | GCATC | 3 cut(s) | 886, 1199, 2539 |
| MaeI | CTAG | 6 cut(s) | 525, 669, 777, 969, 1032, 2999 |
| MaeII | ACGT | 4 cut(s) | 556, 798, 1608, 2453 |
| MaeIII | GTNAC | 6 cut(s) | 552, 1203, 1306, 1516, 2449, 2660 |
| MflI | RGATCY | 2 cut(s) | 527, 2035 |
| MhlI | GDGCHC | 3 cut(s) | 537, 1012, 1145 |
| MluCI | AATT | 9 cut(s) | 657, 932, 993, 1440, 1727, 2310, 2463, 2665, 2984 |
| MlyI | GAGTC | 3 cut(s) | 443, 757, 1220 |
| MmeI | TCCRAC | 3 cut(s) | 781, 2071, 2712 |
| MroNI | GCCGGC | 1 cut(s) | 2168 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2279, 2951 |
| MseI | TTAA | 4 cut(s) | 1017, 1341, 1505, 2364 |
| MslI | CAYNNNNRTG | 3 cut(s) | 102, 2106, 2447 |
| MspA1I | CMGCKG | 1 cut(s) | 2215 |
| Mva1269I | GAATGC | 2 cut(s) | 2638, 2761 |
| MvnI | CGCG | 5 cut(s) | 357, 390, 1621, 2166, 2597 |
| NaeI | GCCGGC | 1 cut(s) | 2170 |
| NciI | CCSGG | 7 cut(s) | 248, 344, 445, 446, 1119, 1650, 2638 |
| NcoI | CCATGG | 1 cut(s) | 2584 |
| NgoMIV | GCCGGC | 1 cut(s) | 2168 |
| NheI | GCTAGC | 1 cut(s) | 968 |
| NmuCI | GTSAC | 2 cut(s) | 552, 2449 |
| NruI | TCGCGA | 2 cut(s) | 357, 390 |
| NspI | RCATGY | 3 cut(s) | 703, 785, 2176 |
| NspV | TTCGAA | 2 cut(s) | 2273, 2770 |
| OliI | CACNNNNGTG | 2 cut(s) | 102, 2447 |
| PaeI | GCATGC | 1 cut(s) | 785 |
| PaeR7I | CTCGAG | 1 cut(s) | 1208 |
| PciI | ACATGT | 1 cut(s) | 699 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 105, 117, 1782, 2079 |
| PctI | GAATGC | 2 cut(s) | 2638, 2761 |
| PdiI | GCCGGC | 1 cut(s) | 2170 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2279, 2951 |
| PfeI | GAWTC | 8 cut(s) | 122, 140, 161, 1864, 2084, 2096, 2270, 2854 |
| Pfl23II | CGTACG | 1 cut(s) | 1706 |
| PflFI | GACNNNGTC | 1 cut(s) | 2288 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 859 |
| PinAI | ACCGGT | 1 cut(s) | 716 |
| Ple19I | CGATCG | 1 cut(s) | 361 |
| PleI | GAGTC | 3 cut(s) | 443, 757, 1219 |
| PpsI | GAGTC | 3 cut(s) | 443, 757, 1219 |
| PpuMI | RGGWCCY | 1 cut(s) | 2193 |
| PscI | ACATGT | 1 cut(s) | 699 |
| PsiI | TTATAA | 1 cut(s) | 2562 |
| Psp5II | RGGWCCY | 1 cut(s) | 2193 |
| PspFI | CCCAGC | 3 cut(s) | 2215, 2295, 2992 |
| PspLI | CGTACG | 1 cut(s) | 1706 |
| PspOMI | GGGCCC | 1 cut(s) | 1141 |
| PspPI | GGNCC | 9 cut(s) | 244, 340, 887, 1067, 1141, 1142, 1220, 2193, 2209 |
| PspPPI | RGGWCCY | 1 cut(s) | 2193 |
| PspXI | VCTCGAGB | 1 cut(s) | 1208 |
| PstI | CTGCAG | 2 cut(s) | 649, 1525 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1685 |
| PsuI | RGATCY | 2 cut(s) | 527, 2035 |
| PsyI | GACNNNGTC | 1 cut(s) | 2288 |
| PvuI | CGATCG | 1 cut(s) | 361 |
| PvuII | CAGCTG | 1 cut(s) | 2215 |
| RruI | TCGCGA | 2 cut(s) | 357, 390 |
| RsaI | GTAC | 8 cut(s) | 26, 442, 797, 1023, 1708, 1955, 2221, 2480 |
| RsaNI | GTAC | 8 cut(s) | 25, 441, 796, 1022, 1707, 1954, 2220, 2479 |
| RseI | CAYNNNNRTG | 3 cut(s) | 102, 2106, 2447 |
| SaqAI | TTAA | 4 cut(s) | 1017, 1341, 1505, 2364 |
| Sau96I | GGNCC | 9 cut(s) | 244, 340, 887, 1067, 1141, 1142, 1220, 2193, 2209 |
| SchI | GAGTC | 3 cut(s) | 443, 757, 1220 |
| SduI | GDGCHC | 3 cut(s) | 537, 1012, 1145 |
| SfaNI | GCATC | 3 cut(s) | 886, 1199, 2539 |
| SfcI | CTRYAG | 3 cut(s) | 645, 1521, 3060 |
| Sfr274I | CTCGAG | 1 cut(s) | 1208 |
| SfuI | TTCGAA | 2 cut(s) | 2273, 2770 |
| SinI | GGWCC | 6 cut(s) | 244, 340, 1067, 1220, 2193, 2209 |
| SlaI | CTCGAG | 1 cut(s) | 1208 |
| SmaI | CCCGGG | 1 cut(s) | 446 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 102, 2106, 2447 |
| SmlI | CTYRAG | 2 cut(s) | 1136, 1208 |
| SmoI | CTYRAG | 2 cut(s) | 1136, 1208 |
| SpeI | ACTAGT | 1 cut(s) | 668 |
| SphI | GCATGC | 1 cut(s) | 785 |
| Sse9I | AATT | 9 cut(s) | 657, 932, 993, 1440, 1727, 2310, 2463, 2665, 2984 |
| SspMI | CTAG | 6 cut(s) | 525, 669, 777, 969, 1032, 2999 |
| StyI | CCWWGG | 4 cut(s) | 1381, 1491, 2584, 2922 |
| TaaI | ACNGT | 7 cut(s) | 440, 831, 881, 1337, 1366, 2044, 2069 |
| TaiI | ACGT | 4 cut(s) | 559, 801, 1611, 2456 |
| TaqI | TCGA | 9 cut(s) | 548, 1193, 1209, 1862, 2082, 2273, 2283, 2304, 2770 |
| TaqII | GACCGA | 1 cut(s) | 1055 |
| TasI | AATT | 9 cut(s) | 657, 932, 993, 1440, 1727, 2310, 2463, 2665, 2984 |
| TatI | WGTACW | 1 cut(s) | 2478 |
| TauI | GCSGC | 3 cut(s) | 1737, 2166, 2558 |
| TfiI | GAWTC | 8 cut(s) | 122, 140, 161, 1864, 2084, 2096, 2270, 2854 |
| Tru1I | TTAA | 4 cut(s) | 1017, 1341, 1505, 2364 |
| Tru9I | TTAA | 4 cut(s) | 1017, 1341, 1505, 2364 |
| TscAI | CASTG | 3 cut(s) | 886, 1758, 2449 |
| TseFI | GTSAC | 2 cut(s) | 552, 2449 |
| Tsp45I | GTSAC | 2 cut(s) | 552, 2449 |
| TspDTI | ATGAA | 6 cut(s) | 153, 939, 1447, 2080, 2888, 2927 |
| TspGWI | ACGGA | 6 cut(s) | 23, 51, 421, 475, 1039, 1978 |
| TspMI | CCCGGG | 1 cut(s) | 444 |
| TspRI | CASTG | 3 cut(s) | 886, 1758, 2449 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2288 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 859 |
| VpaK11BI | GGWCC | 6 cut(s) | 244, 340, 1067, 1220, 2193, 2209 |
| XapI | RAATTY | 4 cut(s) | 657, 932, 1727, 2310 |
| XceI | RCATGY | 3 cut(s) | 703, 785, 2176 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1093 |
| XhoI | CTCGAG | 1 cut(s) | 1208 |
| XmaI | CCCGGG | 1 cut(s) | 444 |
| XmiI | GTMKAC | 3 cut(s) | 912, 1910, 2356 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2279, 2951 |
| XspI | CTAG | 6 cut(s) | 525, 669, 777, 969, 1032, 2999 |