Enhancer of polycomb-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04670 AT5G04670 |
| fragaria_vesca | FvH4_7g05840 FvH4_7g05840 FvH4_7g05840 |
| malus_domestica | MD02G1255000.v1.1 MD07G1067000.v1.1 |
| prunus_persica | Prupe.2G084200_v2.0.a1 Prupe.2G084200_v2.0.a1 |
| pyrus_communis | pycom02g21480 pycom07g05120 |
| rosa_chinensis | RchiOBHm_Chr1g0332951 |
| rosa_laevigata | RLG00000029631 |
| rosa_multiflora | Rmu_co8256169.1_g000001 Rmu_co8522447.1_g000001 Rmu_sc0000117.1_g000032 Rmu_sc0000813.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00317850 |
| rosa_rugosa | Rorug01G0106100 |
| rosa_samantha | Rh1AG129300 Rh1BG098500 Rh1CG123200 Rh1DG135100 |
| rosa_wichuraiana | Rw1G010370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1556, 2358 |
| AarI | CACCTGC | 1 cut(s) | 1508 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2166 |
| Acc16I | TGCGCA | 1 cut(s) | 2138 |
| Acc36I | ACCTGC | 1 cut(s) | 1508 |
| AccB1I | GGYRCC | 1 cut(s) | 533 |
| AccI | GTMKAC | 1 cut(s) | 512 |
| AccII | CGCG | 4 cut(s) | 531, 539, 832, 1123 |
| AccIII | TCCGGA | 1 cut(s) | 144 |
| AclWI | GGATC | 2 cut(s) | 2114, 2413 |
| AcoI | YGGCCR | 3 cut(s) | 213, 253, 2277 |
| AcsI | RAATTY | 4 cut(s) | 861, 1117, 1595, 2294 |
| AcuI | CTGAAG | 3 cut(s) | 1413, 1868, 2406 |
| AfaI | GTAC | 5 cut(s) | 734, 847, 1383, 1735, 2433 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 28, 53, 54, 522, 1639, 1694 |
| AgsI | TTSAA | 7 cut(s) | 455, 1329, 1627, 1858, 1913, 2155, 2261 |
| AjnI | CCWGG | 2 cut(s) | 1711, 2088 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 608, 640 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1153, 1185 |
| Alw21I | GWGCWC | 3 cut(s) | 158, 857, 1046 |
| Alw26I | GTCTC | 1 cut(s) | 2152 |
| Alw44I | GTGCAC | 1 cut(s) | 1042 |
| AlwI | GGATC | 2 cut(s) | 2114, 2413 |
| Ama87I | CYCGRG | 4 cut(s) | 47, 237, 383, 651 |
| Aor13HI | TCCGGA | 1 cut(s) | 144 |
| ApaI | GGGCCC | 1 cut(s) | 301 |
| ApaLI | GTGCAC | 1 cut(s) | 1042 |
| ApoI | RAATTY | 4 cut(s) | 861, 1117, 1595, 2294 |
| AseI | ATTAAT | 2 cut(s) | 1269, 1916 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1461, 1853 |
| AspLEI | GCGC | 3 cut(s) | 127, 531, 2139 |
| AsuC2I | CCSGG | 6 cut(s) | 43, 384, 385, 652, 653, 1695 |
| AsuHPI | GGTGA | 4 cut(s) | 304, 454, 625, 2400 |
| AvaI | CYCGRG | 4 cut(s) | 47, 237, 383, 651 |
| AvaII | GGWCC | 4 cut(s) | 39, 186, 249, 1630 |
| BaeGI | GKGCMC | 3 cut(s) | 301, 1046, 1695 |
| BalI | TGGCCA | 1 cut(s) | 215 |
| BanI | GGYRCC | 1 cut(s) | 533 |
| BanII | GRGCYC | 4 cut(s) | 238, 301, 857, 2323 |
| BauI | CACGAG | 1 cut(s) | 190 |
| BbsI | GAAGAC | 3 cut(s) | 672, 1289, 1326 |
| Bbv12I | GWGCWC | 3 cut(s) | 158, 857, 1046 |
| BbvCI | CCTCAGC | 1 cut(s) | 1872 |
| BceAI | ACGGC | 4 cut(s) | 404, 1255, 1524, 2327 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1353, 1387, 1482, 1516 |
| BciT130I | CCWGG | 2 cut(s) | 1713, 2090 |
| BclI | TGATCA | 1 cut(s) | 1386 |
| BcnI | CCSGG | 6 cut(s) | 43, 384, 385, 652, 653, 1695 |
| BcoDI | GTCTC | 1 cut(s) | 2152 |
| BfaI | CTAG | 9 cut(s) | 849, 1062, 1164, 1592, 1788, 1892, 2117, 2348, 2396 |
| BfmI | CTRYAG | 3 cut(s) | 918, 1257, 1302 |
| BfuAI | ACCTGC | 1 cut(s) | 1508 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1054 |
| BglII | AGATCT | 3 cut(s) | 2108, 2285, 2344 |
| Bme1390I | CCNGG | 8 cut(s) | 43, 384, 385, 652, 653, 1695, 1713, 2090 |
| Bme18I | GGWCC | 4 cut(s) | 39, 186, 249, 1630 |
| BmeT110I | CYCGRG | 4 cut(s) | 47, 237, 383, 651 |
| BmiI | GGNNCC | 5 cut(s) | 41, 299, 535, 562, 1204 |
| BmrFI | CCNGG | 8 cut(s) | 43, 384, 385, 652, 653, 1695, 1713, 2090 |
| BmrI | ACTGGG | 2 cut(s) | 98, 709 |
| BmsI | GCATC | 6 cut(s) | 791, 1271, 1915, 2220, 2263, 2404 |
| BmuI | ACTGGG | 2 cut(s) | 98, 709 |
| BoxI | GACNNNNGTC | 3 cut(s) | 10, 1404, 1753 |
| BpiI | GAAGAC | 3 cut(s) | 672, 1289, 1326 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 64, 96 |
| BpmI | CTGGAG | 2 cut(s) | 1473, 1653 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1872, 2078 |
| BpuEI | CTTGAG | 1 cut(s) | 1661 |
| BpuMI | CCSGG | 6 cut(s) | 43, 384, 385, 652, 653, 1695 |
| Bsa29I | ATCGAT | 1 cut(s) | 1606 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1974, 2068 |
| BsaJI | CCNNGG | 8 cut(s) | 216, 304, 383, 651, 1332, 1711, 1794, 1899 |
| BsaWI | WCCGGW | 2 cut(s) | 144, 2410 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1194, 1224, 1413, 1443 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 28, 53, 54, 522, 1639, 1694 |
| Bse118I | RCCGGY | 1 cut(s) | 1048 |
| Bse1I | ACTGG | 8 cut(s) | 93, 323, 345, 437, 704, 747, 1224, 2439 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1974, 2068 |
| BseAI | TCCGGA | 1 cut(s) | 144 |
| BseBI | CCWGG | 2 cut(s) | 1713, 2090 |
| BseCI | ATCGAT | 1 cut(s) | 1606 |
| BseDI | CCNNGG | 8 cut(s) | 216, 304, 383, 651, 1332, 1711, 1794, 1899 |
| BseGI | GGATG | 7 cut(s) | 210, 501, 809, 1683, 2046, 2301, 2419 |
| BseJI | GATNNNNATC | 2 cut(s) | 1974, 2068 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 28, 53, 54, 522, 1639, 1694 |
| BseMII | CTCAG | 7 cut(s) | 51, 143, 753, 976, 1206, 1863, 2336 |
| BseNI | ACTGG | 8 cut(s) | 93, 323, 345, 437, 704, 747, 1224, 2439 |
| BseRI | GAGGAG | 4 cut(s) | 121, 130, 1153, 1165 |
| BseSI | GKGCMC | 3 cut(s) | 301, 1046, 1695 |
| BseX3I | CGGCCG | 2 cut(s) | 253, 2277 |
| BsgI | GTGCAG | 1 cut(s) | 706 |
| Bsh1236I | CGCG | 4 cut(s) | 531, 539, 832, 1123 |
| Bsh1285I | CGRYCG | 2 cut(s) | 256, 2280 |
| BshNI | GGYRCC | 1 cut(s) | 533 |
| BshVI | ATCGAT | 1 cut(s) | 1606 |
| BsiEI | CGRYCG | 2 cut(s) | 256, 2280 |
| BsiHKAI | GWGCWC | 3 cut(s) | 158, 857, 1046 |
| BsiHKCI | CYCGRG | 4 cut(s) | 47, 237, 383, 651 |
| BsiSI | CCGG | 8 cut(s) | 43, 145, 252, 384, 652, 1049, 1695, 2411 |
| BslFI | GGGAC | 7 cut(s) | 4, 25, 70, 390, 634, 1412, 1694 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 28, 53, 54, 522, 1639, 1694 |
| BsmAI | GTCTC | 1 cut(s) | 2152 |
| BsmFI | GGGAC | 7 cut(s) | 4, 25, 70, 390, 634, 1412, 1694 |
| BsmI | GAATGC | 3 cut(s) | 819, 1057, 2344 |
| BsoBI | CYCGRG | 4 cut(s) | 47, 237, 383, 651 |
| Bsp120I | GGGCCC | 1 cut(s) | 297 |
| Bsp1286I | GDGCHC | 7 cut(s) | 158, 238, 301, 857, 1046, 1695, 2323 |
| Bsp13I | TCCGGA | 1 cut(s) | 144 |
| Bsp1407I | TGTACA | 1 cut(s) | 732 |
| Bsp19I | CCATGG | 2 cut(s) | 1332, 1794 |
| BspCNI | CTCAG | 7 cut(s) | 52, 144, 754, 975, 1207, 1864, 2335 |
| BspDI | ATCGAT | 1 cut(s) | 1606 |
| BspEI | TCCGGA | 1 cut(s) | 144 |
| BspFNI | CGCG | 4 cut(s) | 531, 539, 832, 1123 |
| BspHI | TCATGA | 1 cut(s) | 330 |
| BspLI | GGNNCC | 5 cut(s) | 41, 299, 535, 562, 1204 |
| BspMAI | CTGCAG | 1 cut(s) | 922 |
| BspMI | ACCTGC | 1 cut(s) | 1508 |
| BspPI | GGATC | 2 cut(s) | 2114, 2413 |
| BspT107I | GGYRCC | 1 cut(s) | 533 |
| BsrFI | RCCGGY | 1 cut(s) | 1048 |
| BsrGI | TGTACA | 1 cut(s) | 732 |
| BsrI | ACTGG | 8 cut(s) | 93, 323, 345, 437, 704, 747, 1224, 2439 |
| BssAI | RCCGGY | 1 cut(s) | 1048 |
| BssECI | CCNNGG | 8 cut(s) | 216, 304, 383, 651, 1332, 1711, 1794, 1899 |
| BssNAI | GTATAC | 1 cut(s) | 513 |
| BssSI | CACGAG | 1 cut(s) | 190 |
| BssT1I | CCWWGG | 3 cut(s) | 216, 1332, 1794 |
| Bst1107I | GTATAC | 1 cut(s) | 513 |
| Bst2BI | CACGAG | 1 cut(s) | 190 |
| Bst2UI | CCWGG | 2 cut(s) | 1713, 2090 |
| Bst4CI | ACNGT | 7 cut(s) | 305, 888, 1101, 1325, 1429, 1733, 1862 |
| Bst6I | CTCTTC | 6 cut(s) | 107, 485, 1130, 1450, 2000, 2099 |
| BstAUI | TGTACA | 1 cut(s) | 732 |
| BstC8I | GCNNGC | 4 cut(s) | 948, 1046, 1366, 2205 |
| BstDEI | CTNAG | 9 cut(s) | 60, 152, 762, 962, 1207, 1215, 1872, 2078, 2322 |
| BstDSI | CCRYGG | 3 cut(s) | 304, 1332, 1794 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1637 |
| BstF5I | GGATG | 7 cut(s) | 210, 501, 809, 1683, 2046, 2301, 2419 |
| BstFNI | CGCG | 4 cut(s) | 531, 539, 832, 1123 |
| BstHHI | GCGC | 3 cut(s) | 127, 531, 2139 |
| BstMAI | GTCTC | 1 cut(s) | 2152 |
| BstMCI | CGRYCG | 2 cut(s) | 256, 2280 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1054, 2134, 2213, 2273, 2369 |
| BstNI | CCWGG | 2 cut(s) | 1713, 2090 |
| BstNSI | RCATGY | 3 cut(s) | 946, 950, 1368 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 10, 1404, 1753 |
| BstSCI | CCNGG | 8 cut(s) | 41, 382, 383, 650, 651, 1693, 1711, 2088 |
| BstSFI | CTRYAG | 3 cut(s) | 918, 1257, 1302 |
| BstSLI | GKGCMC | 3 cut(s) | 301, 1046, 1695 |
| BstUI | CGCG | 4 cut(s) | 531, 539, 832, 1123 |
| BstV2I | GAAGAC | 3 cut(s) | 672, 1289, 1326 |
| BstX2I | RGATCY | 4 cut(s) | 2108, 2119, 2285, 2344 |
| BstYI | RGATCY | 4 cut(s) | 2108, 2119, 2285, 2344 |
| BstZ17I | GTATAC | 1 cut(s) | 513 |
| BstZI | CGGCCG | 2 cut(s) | 253, 2277 |
| Bsu15I | ATCGAT | 1 cut(s) | 1606 |
| BsuTUI | ATCGAT | 1 cut(s) | 1606 |
| BtgI | CCRYGG | 3 cut(s) | 304, 1332, 1794 |
| BtgZI | GCGATG | 3 cut(s) | 224, 324, 2055 |
| BtsCI | GGATG | 7 cut(s) | 210, 501, 809, 1683, 2046, 2301, 2419 |
| BtsIMutI | CAGTG | 6 cut(s) | 352, 444, 1389, 1729, 1867, 2382 |
| BveI | ACCTGC | 1 cut(s) | 1508 |
| Cac8I | GCNNGC | 4 cut(s) | 948, 1046, 1366, 2205 |
| CciI | TCATGA | 1 cut(s) | 330 |
| CfoI | GCGC | 3 cut(s) | 127, 531, 2139 |
| Cfr10I | RCCGGY | 1 cut(s) | 1048 |
| Cfr9I | CCCGGG | 2 cut(s) | 383, 651 |
| ClaI | ATCGAT | 1 cut(s) | 1606 |
| CpoI | CGGWCCG | 1 cut(s) | 249 |
| Csp6I | GTAC | 5 cut(s) | 733, 846, 1382, 1734, 2432 |
| CspI | CGGWCCG | 1 cut(s) | 249 |
| CviQI | GTAC | 5 cut(s) | 733, 846, 1382, 1734, 2432 |
| DdeI | CTNAG | 9 cut(s) | 60, 152, 762, 962, 1207, 1215, 1872, 2078, 2322 |
| DraI | TTTAAA | 2 cut(s) | 366, 1116 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2166 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2166 |
| EaeI | YGGCCR | 3 cut(s) | 213, 253, 2277 |
| EagI | CGGCCG | 2 cut(s) | 253, 2277 |
| Eam1104I | CTCTTC | 6 cut(s) | 107, 485, 1130, 1450, 2000, 2099 |
| EarI | CTCTTC | 6 cut(s) | 107, 485, 1130, 1450, 2000, 2099 |
| EciI | GGCGGA | 2 cut(s) | 199, 598 |
| Ecl136II | GAGCTC | 1 cut(s) | 855 |
| EclXI | CGGCCG | 2 cut(s) | 253, 2277 |
| Eco130I | CCWWGG | 3 cut(s) | 216, 1332, 1794 |
| Eco24I | GRGCYC | 4 cut(s) | 238, 301, 857, 2323 |
| Eco47I | GGWCC | 4 cut(s) | 39, 186, 249, 1630 |
| Eco52I | CGGCCG | 2 cut(s) | 253, 2277 |
| Eco53kI | GAGCTC | 1 cut(s) | 855 |
| Eco57I | CTGAAG | 3 cut(s) | 1413, 1868, 2406 |
| Eco88I | CYCGRG | 4 cut(s) | 47, 237, 383, 651 |
| EcoICRI | GAGCTC | 1 cut(s) | 855 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1637 |
| EcoO109I | RGGNCCY | 4 cut(s) | 39, 297, 1524, 1630 |
| EcoRII | CCWGG | 2 cut(s) | 1711, 2088 |
| EcoT14I | CCWWGG | 3 cut(s) | 216, 1332, 1794 |
| EcoT22I | ATGCAT | 1 cut(s) | 948 |
| EcoT38I | GRGCYC | 4 cut(s) | 238, 301, 857, 2323 |
| ErhI | CCWWGG | 3 cut(s) | 216, 1332, 1794 |
| FaqI | GGGAC | 7 cut(s) | 4, 25, 70, 390, 634, 1412, 1694 |
| FauI | CCCGC | 1 cut(s) | 825 |
| FbaI | TGATCA | 1 cut(s) | 1386 |
| FblI | GTMKAC | 1 cut(s) | 512 |
| FokI | GGATG | 7 cut(s) | 217, 508, 796, 1670, 2053, 2288, 2426 |
| FriOI | GRGCYC | 4 cut(s) | 238, 301, 857, 2323 |
| FspBI | CTAG | 9 cut(s) | 849, 1062, 1164, 1592, 1788, 1892, 2117, 2348, 2396 |
| FspI | TGCGCA | 1 cut(s) | 2138 |
| GlaI | GCGC | 3 cut(s) | 126, 530, 2138 |
| GsuI | CTGGAG | 2 cut(s) | 1473, 1653 |
| HapII | CCGG | 8 cut(s) | 43, 145, 252, 384, 652, 1049, 1695, 2411 |
| HhaI | GCGC | 3 cut(s) | 127, 531, 2139 |
| Hin6I | GCGC | 3 cut(s) | 125, 529, 2137 |
| HinP1I | GCGC | 3 cut(s) | 125, 529, 2137 |
| HincII | GTYRAC | 1 cut(s) | 66 |
| HindII | GTYRAC | 1 cut(s) | 66 |
| HindIII | AAGCTT | 1 cut(s) | 449 |
| HpaII | CCGG | 8 cut(s) | 43, 145, 252, 384, 652, 1049, 1695, 2411 |
| HphI | GGTGA | 4 cut(s) | 304, 454, 625, 2400 |
| Hpy166II | GTNNAC | 7 cut(s) | 66, 229, 513, 616, 733, 910, 1044 |
| Hpy8I | GTNNAC | 7 cut(s) | 66, 229, 513, 616, 733, 910, 1044 |
| Hpy99I | CGWCG | 4 cut(s) | 16, 425, 1177, 2368 |
| HpyAV | CCTTC | 6 cut(s) | 600, 604, 1149, 1388, 1475, 1930 |
| HpyCH4III | ACNGT | 7 cut(s) | 305, 888, 1101, 1325, 1429, 1733, 1862 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1054, 2134, 2213, 2273, 2369 |
| HpyF3I | CTNAG | 9 cut(s) | 60, 152, 762, 962, 1207, 1215, 1872, 2078, 2322 |
| HspAI | GCGC | 3 cut(s) | 125, 529, 2137 |
| Kpn2I | TCCGGA | 1 cut(s) | 144 |
| Ksp22I | TGATCA | 1 cut(s) | 1386 |
| LmnI | GCTCC | 4 cut(s) | 147, 852, 1202, 1421 |
| LweI | GCATC | 6 cut(s) | 791, 1271, 1915, 2220, 2263, 2404 |
| MaeI | CTAG | 9 cut(s) | 849, 1062, 1164, 1592, 1788, 1892, 2117, 2348, 2396 |
| MaeIII | GTNAC | 4 cut(s) | 1727, 1862, 2325, 2350 |
| MfeI | CAATTG | 1 cut(s) | 792 |
| MflI | RGATCY | 4 cut(s) | 2108, 2119, 2285, 2344 |
| MhlI | GDGCHC | 7 cut(s) | 158, 238, 301, 857, 1046, 1695, 2323 |
| MlsI | TGGCCA | 1 cut(s) | 215 |
| MluNI | TGGCCA | 1 cut(s) | 215 |
| MlyI | GAGTC | 8 cut(s) | 71, 73, 104, 290, 412, 686, 1763, 1820 |
| MmeI | TCCRAC | 2 cut(s) | 606, 1316 |
| Mox20I | TGGCCA | 1 cut(s) | 215 |
| Mph1103I | ATGCAT | 1 cut(s) | 948 |
| MroI | TCCGGA | 1 cut(s) | 144 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1461, 1853 |
| MscI | TGGCCA | 1 cut(s) | 215 |
| MseI | TTAA | 8 cut(s) | 324, 365, 483, 1115, 1269, 1487, 1916, 2253 |
| MslI | CAYNNNNRTG | 4 cut(s) | 161, 345, 1062, 1688 |
| Msp20I | TGGCCA | 1 cut(s) | 215 |
| MspA1I | CMGCKG | 2 cut(s) | 1982, 2420 |
| MspI | CCGG | 8 cut(s) | 43, 145, 252, 384, 652, 1049, 1695, 2411 |
| MspR9I | CCNGG | 8 cut(s) | 43, 384, 385, 652, 653, 1695, 1713, 2090 |
| MunI | CAATTG | 1 cut(s) | 792 |
| Mva1269I | GAATGC | 3 cut(s) | 819, 1057, 2344 |
| MvaI | CCWGG | 2 cut(s) | 1713, 2090 |
| MvnI | CGCG | 4 cut(s) | 531, 539, 832, 1123 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1054, 2134, 2213, 2273, 2369 |
| NciI | CCSGG | 6 cut(s) | 43, 384, 385, 652, 653, 1695 |
| NcoI | CCATGG | 2 cut(s) | 1332, 1794 |
| NlaIV | GGNNCC | 5 cut(s) | 41, 299, 535, 562, 1204 |
| NmeAIII | GCCGAG | 3 cut(s) | 61, 1352, 2305 |
| NmuCI | GTSAC | 3 cut(s) | 1727, 1862, 2350 |
| NsbI | TGCGCA | 1 cut(s) | 2138 |
| NsiI | ATGCAT | 1 cut(s) | 948 |
| NspI | RCATGY | 3 cut(s) | 946, 950, 1368 |
| PaeI | GCATGC | 2 cut(s) | 950, 1368 |
| PagI | TCATGA | 1 cut(s) | 330 |
| PaqCI | CACCTGC | 1 cut(s) | 1508 |
| PctI | GAATGC | 3 cut(s) | 819, 1057, 2344 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1461, 1853 |
| PfeI | GAWTC | 7 cut(s) | 272, 350, 629, 1358, 1975, 2095, 2379 |
| PflFI | GACNNNGTC | 1 cut(s) | 61 |
| PleI | GAGTC | 8 cut(s) | 70, 73, 103, 289, 411, 685, 1762, 1820 |
| PpsI | GAGTC | 8 cut(s) | 70, 73, 103, 289, 411, 685, 1762, 1820 |
| PpuMI | RGGWCCY | 2 cut(s) | 39, 1630 |
| PshAI | GACNNNNGTC | 3 cut(s) | 10, 1404, 1753 |
| PshBI | ATTAAT | 2 cut(s) | 1269, 1916 |
| PsiI | TTATAA | 2 cut(s) | 1556, 2358 |
| Psp124BI | GAGCTC | 1 cut(s) | 857 |
| Psp5II | RGGWCCY | 2 cut(s) | 39, 1630 |
| Psp6I | CCWGG | 2 cut(s) | 1711, 2088 |
| PspGI | CCWGG | 2 cut(s) | 1711, 2088 |
| PspN4I | GGNNCC | 5 cut(s) | 41, 299, 535, 562, 1204 |
| PspOMI | GGGCCC | 1 cut(s) | 297 |
| PspPPI | RGGWCCY | 2 cut(s) | 39, 1630 |
| PstI | CTGCAG | 1 cut(s) | 922 |
| PsuI | RGATCY | 4 cut(s) | 2108, 2119, 2285, 2344 |
| PsyI | GACNNNGTC | 1 cut(s) | 61 |
| PvuII | CAGCTG | 1 cut(s) | 1982 |
| RsaI | GTAC | 5 cut(s) | 734, 847, 1383, 1735, 2433 |
| RsaNI | GTAC | 5 cut(s) | 733, 846, 1382, 1734, 2432 |
| RseI | CAYNNNNRTG | 4 cut(s) | 161, 345, 1062, 1688 |
| Rsr2I | CGGWCCG | 1 cut(s) | 249 |
| RsrII | CGGWCCG | 1 cut(s) | 249 |
| SacI | GAGCTC | 1 cut(s) | 857 |
| SaqAI | TTAA | 8 cut(s) | 324, 365, 483, 1115, 1269, 1487, 1916, 2253 |
| SchI | GAGTC | 8 cut(s) | 71, 73, 104, 290, 412, 686, 1763, 1820 |
| ScrFI | CCNGG | 8 cut(s) | 43, 384, 385, 652, 653, 1695, 1713, 2090 |
| SduI | GDGCHC | 7 cut(s) | 158, 238, 301, 857, 1046, 1695, 2323 |
| SfaNI | GCATC | 6 cut(s) | 791, 1271, 1915, 2220, 2263, 2404 |
| SfcI | CTRYAG | 3 cut(s) | 918, 1257, 1302 |
| SinI | GGWCC | 4 cut(s) | 39, 186, 249, 1630 |
| SmaI | CCCGGG | 2 cut(s) | 385, 653 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 161, 345, 1062, 1688 |
| SmlI | CTYRAG | 1 cut(s) | 1676 |
| SmoI | CTYRAG | 1 cut(s) | 1676 |
| SphI | GCATGC | 2 cut(s) | 950, 1368 |
| SspMI | CTAG | 9 cut(s) | 849, 1062, 1164, 1592, 1788, 1892, 2117, 2348, 2396 |
| SstI | GAGCTC | 1 cut(s) | 857 |
| StyD4I | CCNGG | 8 cut(s) | 41, 382, 383, 650, 651, 1693, 1711, 2088 |
| StyI | CCWWGG | 3 cut(s) | 216, 1332, 1794 |
| TaaI | ACNGT | 7 cut(s) | 305, 888, 1101, 1325, 1429, 1733, 1862 |
| TaqI | TCGA | 8 cut(s) | 77, 98, 671, 838, 881, 1343, 1606, 2102 |
| TaqII | GACCGA | 1 cut(s) | 1644 |
| TatI | WGTACW | 5 cut(s) | 732, 845, 1381, 1733, 2431 |
| TauI | GCSGC | 5 cut(s) | 258, 261, 534, 2279, 2420 |
| TfiI | GAWTC | 7 cut(s) | 272, 350, 629, 1358, 1975, 2095, 2379 |
| Tru1I | TTAA | 8 cut(s) | 324, 365, 483, 1115, 1269, 1487, 1916, 2253 |
| Tru9I | TTAA | 8 cut(s) | 324, 365, 483, 1115, 1269, 1487, 1916, 2253 |
| TscAI | CASTG | 6 cut(s) | 352, 444, 1396, 1736, 1867, 2389 |
| TseFI | GTSAC | 3 cut(s) | 1727, 1862, 2350 |
| Tsp45I | GTSAC | 3 cut(s) | 1727, 1862, 2350 |
| TspDTI | ATGAA | 8 cut(s) | 347, 492, 798, 1023, 1437, 1672, 1719, 2018 |
| TspGWI | ACGGA | 3 cut(s) | 173, 1161, 2065 |
| TspMI | CCCGGG | 2 cut(s) | 383, 651 |
| TspRI | CASTG | 6 cut(s) | 352, 444, 1396, 1736, 1867, 2389 |
| Tth111I | GACNNNGTC | 1 cut(s) | 61 |
| VneI | GTGCAC | 1 cut(s) | 1042 |
| VpaK11BI | GGWCC | 4 cut(s) | 39, 186, 249, 1630 |
| VspI | ATTAAT | 2 cut(s) | 1269, 1916 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1637 |
| XapI | RAATTY | 4 cut(s) | 861, 1117, 1595, 2294 |
| XbaI | TCTAGA | 1 cut(s) | 1787 |
| XceI | RCATGY | 3 cut(s) | 946, 950, 1368 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 223 |
| XmaI | CCCGGG | 2 cut(s) | 383, 651 |
| XmiI | GTMKAC | 1 cut(s) | 512 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1461, 1853 |
| XspI | CTAG | 9 cut(s) | 849, 1062, 1164, 1592, 1788, 1892, 2117, 2348, 2396 |
| Zsp2I | ATGCAT | 1 cut(s) | 948 |