Rroxscaffold_4G00317850

Enhancer of polycomb-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0008000
Physical Location & Seq
Reverse (-)
43405780 .. 43410424
4645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00317850.1

Sequence Viewer

Length: 2469 bp
ATGAGGTTGGCGTCGCCGTTTTCTGAGATTGAGAGTTTCGGGTCCGAGTTTGGGACTGAGTCGACTCGGAGACCGACTCGGAGACGACGGGCTGCGAGGGAGTCGGAGAGGAGGAGGAGGAAGAGCACGAGGCCGAGAGTGGTGGTGCTTCGGAATTTGAGGAAGGAAATGCCATCGGTGGAGATGAGGAGGACCACGAGGGTTTTCGGGATGGGGAAGGGGGTGGACGGAGCCCGGGTCTTGCGTTCGGGCCGCCGCCTCTGGCCCGAATCCTCTGTGGTCAAGCTGGAGAGAACCAACGAGGACGAGGACTGGTTCAAGCTCATCAATAACAATGGGGAAGGTCGTGATTCTGATGCAATTGGTTTAAAGCATAAGGGATGGACCAGAGCCACCCGGCTAGCGGGTCATAAGCCTAAGCCGAATATAGTTGTTTCGGTCAGTCGAGTCCTTGAGAAGCCTGTTGAGACTAAGGTTTTGGCTAATGGGCTCAAGCAGTATAAGAGGTTCGGGATTGTATATACCAGGAAGAGGAGACGCACTGGTCACTCGGTCAATGTGGAGAATCAAAGTGGCTCTGAGGATAGAATGTACGGGCAGAGGTTTGCGAGGAAGAGGAGGAAGACATGTGGCAGTGGCAGCTTGGTAGGAGCTGAGAGGTTGGATCTTGCAAGCCCTGAAGTGCTTCACATTACATTTGAGTCTTCATTGGGTAGACGAAACTGGGCTGCTCGGCTTTTGTATTCGATTTTGGTGTACATGTCGAGGTCCAGCCTGCAATTGACTGAGCTTTCTCAATTCCTTGTCTCGGAGCCCCTCAGCATTGTTTTTGCCTTGCCTGGCATTAATTTTTCCTGGGTACGCTCTTCTACTATTGGCTCTGGAGTTTGCAAGTTCTTTGGGAGCAAGGAGTTCATGCCAATGTTTTCTGTGGACTTTTCTGCAGTTCCTCAATGTTTCACGCTCATGCACTCCGAAATGCATTTTAGATACATTTTTCGGCCAATTCTTCCTGTAAATTATCTCAATGATGGGCATGTAGATGATGATGATGATGATGTTAATCAGTGTGGCAATGACAGTGACGAGTGTGTAGTCTTGCATGAGGTTGATCACGCCGAAAACAGACCGTTGCATCCAGTTGTAAAAGTTCCCAAATTAGGTTGTAGAAGCACAGTGTATAGGAATGGTTTAAGTTCGCGAGGTGGTATTCAAAAGAGGAGGAGTTCATTGAGGAGGAGATCTAGAAACCCTTCTTTTGTTGCTTTACGGAAACCAAATGGAGCCTTGGTTTCAGAATTAAAGAAGAATGGCCTTTCCTTTTCTTCTGTAGCCTCAAATCAGAAGCTTAGGAGGTCAGATTCAACTTGCTCTGCAACGAACTCGAAAGCAGTGAGTTCGAATGCGGATAGATTGGTGCAAGATTTAGATTTGACATGCTGCACTGCAAATTTATTGGTCTCTGAATCAGACAGATGTTATAGGGAAGTTGGAGTAACCATTATGCTAGAAACCTCTTCTTCTGGAGAGTGGCTTCTTGTGGTCAAGAAAGATGGATTAACGCGACTTACTCACAAAGCAGAGAAAGAGAAAGTAATAAGGCCGGGCTCTAACCGTTTTACACATGATATTATCTGGTCCCCAGATAGTGATATTTTGAGGCTTGAGTTTCCGGATCGAAGTGAGTGGATTACTTTCAAGGAGCTTTACAAGGAATGTTCTGATCGTAATGCCACCATTGAGTTCATTCCTGAGCCTGCTTCTGACCGTAATGCCACAGCAAAATCCATTCCTGTGCCAGGGGTGCGTGAAGTCCCAGGTTATGCAGATAGCCACAGTTCTCCGTTTCTCATACCAGAGTCATACATATCTGTGAAGGAAGATGAGGTGTCTAGATCCTTTGCAAAGAAGACGGCGAATTATGACATGGACTCTGAAGATGAGGAATGGCTGAAGAAGTTTAACGCATTTTACAGTAAACCTTATGATTTCTCTGATGGAATTGCTGCTGCTAGTCATTTTCTGGACATGGGGAAGAGGGATGTAGTAGAAGCTGTATATAGTTATTGGATGAATAAAAGGAAGCAGAAAAAGTCGTCATTGCTTAGGGTCTTCCAGGGGCATCAAGTGAAAAGACCACTGCTGGACTCAAAGCCTGTTATGCGCAAGAGAAGATCATTTAAACGACAGCCTAGTCAATTTGGCAGAGGAAAACAACCAAGTTTCTTGCAAGCAATGGCTGCAGAACAAGATGCTTTGCAAGAACAGAATGCTGTGCTTAAAGTTGAAGAGGCGAAAGCGGCAGCAGACAGATCTGTGGATTTAGCTATCCGCAAACGACAGAGAGCTCAGGTACTTATGCAGAATGCAGATTTGGCAACTTACAAAGCTGCAATGGCATTTAGAATTGCTGAAGCTGCCCAAGTTCTCGGATCACCCGATGCTGCTGCAGTTTATGTACTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EPL1

Protein Analysis

822

Amino Acids

93.16

Weight (kDa)

9.82

Isoelectric Point (pI)

61.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EPL1 PF10513 574 - 656 4.6e-07 Enhancer of polycomb-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 543, 2193
Acc16I TGCGCA 1 cut(s) 2165
AccI GTMKAC 2 cut(s) 62, 715
AccII CGCG 2 cut(s) 1201, 1564
AccIII TCCGGA 1 cut(s) 1672
AciI CCGC 6 cut(s) 253, 256, 404, 1406, 2300, 2332
AclWI GGATC 4 cut(s) 672, 1683, 1890, 2440
AcoI YGGCCR 1 cut(s) 1001
AcsI RAATTY 2 cut(s) 154, 1450
AcuI CTGAAG 4 cut(s) 699, 1956, 1973, 2433
AcyI GRCGYC 1 cut(s) 11
AfaI GTAC 5 cut(s) 593, 758, 861, 2355, 2460
AfiI CCNNNNNNNGG 6 cut(s) 51, 403, 531, 808, 1160, 1799
AflIII ACRYGT 2 cut(s) 626, 759
AgsI TTSAA 5 cut(s) 319, 1214, 1365, 1699, 2288
AjnI CCWGG 6 cut(s) 524, 838, 854, 1798, 1816, 2115
AjuI GAANNNNNNNTTGG 2 cut(s) 2357, 2389
Alw21I GWGCWC 2 cut(s) 128, 2350
Alw26I GTCTC 6 cut(s) 64, 76, 461, 529, 811, 1465
AlwI GGATC 4 cut(s) 672, 1683, 1890, 2440
Ama87I CYCGRG 1 cut(s) 234
Aor13HI TCCGGA 1 cut(s) 1672
AoxI GGCC 6 cut(s) 131, 250, 263, 1001, 1312, 1601
ApoI RAATTY 2 cut(s) 154, 1450
ArsI GACNNNNNNTTYG 2 cut(s) 460, 492
AseI ATTAAT 1 cut(s) 846
Asp700I GAANNNNTTC 2 cut(s) 684, 1252
AspLEI GCGC 1 cut(s) 2166
AspS9I GGNCC 7 cut(s) 42, 192, 250, 264, 384, 768, 1638
AsuC2I CCSGG 4 cut(s) 235, 236, 397, 1605
AsuHPI GGTGA 1 cut(s) 2427
AsuII TTCGAA 1 cut(s) 1400
AsuNHI GCTAGC 1 cut(s) 400
AvaI CYCGRG 1 cut(s) 234
AvaII GGWCC 5 cut(s) 42, 192, 384, 768, 1638
BanII GRGCYC 5 cut(s) 235, 492, 816, 1610, 2350
BauI CACGAG 2 cut(s) 127, 196
BbsI GAAGAC 4 cut(s) 629, 696, 1916, 2104
Bbv12I GWGCWC 2 cut(s) 128, 2350
BbvCI CCTCAGC 1 cut(s) 818
BccI CCATC 6 cut(s) 181, 205, 375, 1025, 1547, 1991
BceAI ACGGC 1 cut(s) 1929
BcgI CGANNNNNNTGC 6 cut(s) 1365, 1380, 1399, 1414, 2429, 2463
BciT130I CCWGG 6 cut(s) 526, 840, 856, 1800, 1818, 2117
BclI TGATCA 1 cut(s) 1111
BcnI CCSGG 4 cut(s) 235, 236, 397, 1605
BcoDI GTCTC 6 cut(s) 64, 76, 461, 529, 811, 1465
BfaI CTAG 6 cut(s) 401, 1245, 1508, 1893, 2013, 2193
BfmI CTRYAG 4 cut(s) 942, 1329, 2241, 2448
BglII AGATCT 2 cut(s) 1241, 2312
Bme18I GGWCC 5 cut(s) 42, 192, 384, 768, 1638
BmeT110I CYCGRG 1 cut(s) 234
BmgT120I GGNCC 7 cut(s) 42, 192, 250, 264, 384, 768, 1638
BmiI GGNNCC 5 cut(s) 43, 232, 813, 1285, 1640
BmrI ACTGGG 1 cut(s) 733
BmsI GCATC 5 cut(s) 346, 1144, 2131, 2242, 2431
BmtI GCTAGC 1 cut(s) 404
BmuI ACTGGG 1 cut(s) 733
BpiI GAAGAC 4 cut(s) 629, 696, 1916, 2104
BplI GAGNNNNNCTC 2 cut(s) 61, 93
BpmI CTGGAG 3 cut(s) 308, 903, 1545
Bpu10I CCTNAGC 6 cut(s) 417, 818, 1349, 1752, 2105, 2349
Bpu14I TTCGAA 1 cut(s) 1400
BpuEI CTTGAG 3 cut(s) 473, 476, 1685
BpuMI CCSGG 4 cut(s) 235, 236, 397, 1605
BsaBI GATNNNNATC 1 cut(s) 1062
BsaHI GRCGYC 1 cut(s) 11
BsaI GGTCTC 2 cut(s) 64, 1465
BsaJI CCNNGG 6 cut(s) 234, 855, 1287, 1799, 1816, 2116
BsaWI WCCGGW 1 cut(s) 1672
BsaXI ACNNNNNCTCC 4 cut(s) 222, 252, 1275, 1305
Bsc4I CCNNNNNNNGG 6 cut(s) 51, 403, 531, 808, 1160, 1799
Bse1I ACTGG 4 cut(s) 317, 547, 728, 1139
Bse3DI GCAATG 4 cut(s) 1081, 2099, 2241, 2400
Bse8I GATNNNNATC 1 cut(s) 1062
BseAI TCCGGA 1 cut(s) 1672
BseBI CCWGG 6 cut(s) 526, 840, 856, 1800, 1818, 2117
BseDI CCNNGG 6 cut(s) 234, 855, 1287, 1799, 1816, 2116
BseGI GGATG 5 cut(s) 216, 386, 1135, 2047, 2076
BseJI GATNNNNATC 1 cut(s) 1062
BseLI CCNNNNNNNGG 6 cut(s) 51, 403, 531, 808, 1160, 1799
BseMI GCAATG 4 cut(s) 1081, 2099, 2241, 2400
BseMII CTCAG 8 cut(s) 15, 48, 570, 645, 777, 832, 1743, 2363
BseNI ACTGG 4 cut(s) 317, 547, 728, 1139
BsgI GTGCAG 1 cut(s) 1426
Bsh1236I CGCG 2 cut(s) 1201, 1564
BshFI GGCC 6 cut(s) 133, 252, 265, 1003, 1314, 1603
BsiHKAI GWGCWC 2 cut(s) 128, 2350
BsiHKCI CYCGRG 1 cut(s) 234
BsiSI CCGG 4 cut(s) 235, 397, 1604, 1673
BslFI GGGAC 3 cut(s) 67, 1624, 1799
BslI CCNNNNNNNGG 6 cut(s) 51, 403, 531, 808, 1160, 1799
BsmAI GTCTC 6 cut(s) 64, 76, 461, 529, 811, 1465
BsmBI CGTCTC 2 cut(s) 76, 529
BsmFI GGGAC 3 cut(s) 67, 1624, 1799
BsmI GAATGC 3 cut(s) 1408, 2275, 2371
BsnI GGCC 6 cut(s) 133, 252, 265, 1003, 1314, 1603
Bso31I GGTCTC 2 cut(s) 64, 1465
BsoBI CYCGRG 1 cut(s) 234
Bsp119I TTCGAA 1 cut(s) 1400
Bsp1286I GDGCHC 6 cut(s) 128, 235, 492, 816, 1610, 2350
Bsp13I TCCGGA 1 cut(s) 1672
Bsp1407I TGTACA 1 cut(s) 756
Bsp143I GATC 9 cut(s) 664, 1111, 1241, 1675, 1723, 1895, 2174, 2312, 2432
Bsp68I TCGCGA 1 cut(s) 1201
BspACI CCGC 6 cut(s) 253, 256, 404, 1406, 2300, 2332
BspANI GGCC 6 cut(s) 133, 252, 265, 1003, 1314, 1603
BspCNI CTCAG 8 cut(s) 16, 49, 571, 646, 778, 831, 1744, 2362
BspEI TCCGGA 1 cut(s) 1672
BspFNI CGCG 2 cut(s) 1201, 1564
BspLI GGNNCC 5 cut(s) 43, 232, 813, 1285, 1640
BspMAI CTGCAG 3 cut(s) 946, 2245, 2452
BspOI GCTAGC 1 cut(s) 404
BspPI GGATC 4 cut(s) 672, 1683, 1890, 2440
BspQI GCTCTTC 2 cut(s) 116, 871
BspT104I TTCGAA 1 cut(s) 1400
BspTNI GGTCTC 2 cut(s) 64, 1465
BsrDI GCAATG 4 cut(s) 1081, 2099, 2241, 2400
BsrGI TGTACA 1 cut(s) 756
BsrI ACTGG 4 cut(s) 317, 547, 728, 1139
BssECI CCNNGG 6 cut(s) 234, 855, 1287, 1799, 1816, 2116
BssMI GATC 9 cut(s) 664, 1111, 1241, 1675, 1723, 1895, 2174, 2312, 2432
BssNI GRCGYC 1 cut(s) 11
BssSI CACGAG 2 cut(s) 127, 196
BssT1I CCWWGG 1 cut(s) 1287
Bst2BI CACGAG 2 cut(s) 127, 196
Bst2UI CCWGG 6 cut(s) 526, 840, 856, 1800, 1818, 2117
Bst4CI ACNGT 7 cut(s) 1082, 1131, 1177, 1616, 1769, 1838, 1976
Bst6I CTCTTC 7 cut(s) 116, 524, 608, 871, 1522, 2030, 2283
BstACI GRCGYC 1 cut(s) 11
BstAPI GCANNNNNTGC 1 cut(s) 2240
BstAUI TGTACA 1 cut(s) 756
BstBI TTCGAA 1 cut(s) 1400
BstC8I GCNNGC 5 cut(s) 402, 673, 776, 1758, 2232
BstENI CCTNNNNNAGG 1 cut(s) 1797
BstF5I GGATG 5 cut(s) 216, 386, 1135, 2047, 2076
BstFNI CGCG 2 cut(s) 1201, 1564
BstHHI GCGC 1 cut(s) 2166
BstKTI GATC 9 cut(s) 667, 1114, 1244, 1678, 1726, 1898, 2177, 2315, 2435
BstMAI GTCTC 6 cut(s) 64, 76, 461, 529, 811, 1465
BstMBI GATC 9 cut(s) 664, 1111, 1241, 1675, 1723, 1895, 2174, 2312, 2432
BstMWI GCNNNNNNNGC 8 cut(s) 639, 1804, 2161, 2240, 2300, 2375, 2396, 2417
BstNI CCWGG 6 cut(s) 526, 840, 856, 1800, 1818, 2117
BstNSI RCATGY 4 cut(s) 630, 763, 1040, 1440
BstSFI CTRYAG 4 cut(s) 942, 1329, 2241, 2448
BstUI CGCG 2 cut(s) 1201, 1564
BstV2I GAAGAC 4 cut(s) 629, 696, 1916, 2104
BstX2I RGATCY 4 cut(s) 664, 1241, 1895, 2312
BstYI RGATCY 4 cut(s) 664, 1241, 1895, 2312
BsuRI GGCC 6 cut(s) 133, 252, 265, 1003, 1314, 1603
BtsCI GGATG 5 cut(s) 216, 386, 1135, 2047, 2076
BtsI GCAGTG 4 cut(s) 640, 1398, 1443, 2138
BtsIMutI CAGTG 8 cut(s) 540, 640, 1073, 1087, 1182, 1398, 1443, 2138
BtuMI TCGCGA 1 cut(s) 1201
Cac8I GCNNGC 5 cut(s) 402, 673, 776, 1758, 2232
CfoI GCGC 1 cut(s) 2166
Cfr13I GGNCC 7 cut(s) 42, 192, 250, 264, 384, 768, 1638
Cfr9I CCCGGG 1 cut(s) 234
CseI GACGC 1 cut(s) 546
Csp6I GTAC 5 cut(s) 592, 757, 860, 2354, 2459
CviQI GTAC 5 cut(s) 592, 757, 860, 2354, 2459
DpnI GATC 9 cut(s) 666, 1113, 1243, 1677, 1725, 1897, 2176, 2314, 2434
DpnII GATC 9 cut(s) 664, 1111, 1241, 1675, 1723, 1895, 2174, 2312, 2432
DraI TTTAAA 2 cut(s) 369, 2182
DrdI GACNNNNNNGTC 2 cut(s) 543, 2193
DseDI GACNNNNNNGTC 2 cut(s) 543, 2193
EaeI YGGCCR 1 cut(s) 1001
Eam1104I CTCTTC 7 cut(s) 116, 524, 608, 871, 1522, 2030, 2283
EarI CTCTTC 7 cut(s) 116, 524, 608, 871, 1522, 2030, 2283
Ecl136II GAGCTC 1 cut(s) 2348
Eco130I CCWWGG 1 cut(s) 1287
Eco24I GRGCYC 5 cut(s) 235, 492, 816, 1610, 2350
Eco31I GGTCTC 2 cut(s) 64, 1465
Eco47I GGWCC 5 cut(s) 42, 192, 384, 768, 1638
Eco53kI GAGCTC 1 cut(s) 2348
Eco57I CTGAAG 4 cut(s) 699, 1956, 1973, 2433
Eco88I CYCGRG 1 cut(s) 234
EcoICRI GAGCTC 1 cut(s) 2348
EcoNI CCTNNNNNAGG 1 cut(s) 1797
EcoRII CCWGG 6 cut(s) 524, 838, 854, 1798, 1816, 2115
EcoT14I CCWWGG 1 cut(s) 1287
EcoT22I ATGCAT 1 cut(s) 984
EcoT38I GRGCYC 5 cut(s) 235, 492, 816, 1610, 2350
ErhI CCWWGG 1 cut(s) 1287
Esp3I CGTCTC 2 cut(s) 76, 529
FaqI GGGAC 3 cut(s) 67, 1624, 1799
FauI CCCGC 1 cut(s) 397
FbaI TGATCA 1 cut(s) 1111
FblI GTMKAC 2 cut(s) 62, 715
FokI GGATG 5 cut(s) 223, 393, 1122, 2054, 2083
FriOI GRGCYC 5 cut(s) 235, 492, 816, 1610, 2350
FspBI CTAG 6 cut(s) 401, 1245, 1508, 1893, 2013, 2193
FspI TGCGCA 1 cut(s) 2165
GlaI GCGC 1 cut(s) 2165
GsuI CTGGAG 3 cut(s) 308, 903, 1545
HaeIII GGCC 6 cut(s) 133, 252, 265, 1003, 1314, 1603
HapII CCGG 4 cut(s) 235, 397, 1604, 1673
HgaI GACGC 1 cut(s) 546
HhaI GCGC 1 cut(s) 2166
Hin1I GRCGYC 1 cut(s) 11
Hin6I GCGC 1 cut(s) 2164
HinP1I GCGC 1 cut(s) 2164
HincII GTYRAC 1 cut(s) 63
HindII GTYRAC 1 cut(s) 63
HindIII AAGCTT 1 cut(s) 1346
HpaII CCGG 4 cut(s) 235, 397, 1604, 1673
HphI GGTGA 1 cut(s) 2427
Hpy166II GTNNAC 6 cut(s) 63, 226, 716, 757, 934, 1979
Hpy8I GTNNAC 6 cut(s) 63, 226, 716, 757, 934, 1979
Hpy99I CGWCG 2 cut(s) 16, 90
HpyAV CCTTC 5 cut(s) 157, 211, 335, 1263, 1870
HpyCH4III ACNGT 7 cut(s) 1082, 1131, 1177, 1616, 1769, 1838, 1976
HpyF10VI GCNNNNNNNGC 8 cut(s) 639, 1804, 2161, 2240, 2300, 2375, 2396, 2417
Hsp92I GRCGYC 1 cut(s) 11
HspAI GCGC 1 cut(s) 2164
Kpn2I TCCGGA 1 cut(s) 1672
Ksp22I TGATCA 1 cut(s) 1111
Kzo9I GATC 9 cut(s) 664, 1111, 1241, 1675, 1723, 1895, 2174, 2312, 2432
LguI GCTCTTC 2 cut(s) 116, 871
LmnI GCTCC 6 cut(s) 230, 650, 811, 903, 1283, 1702
LweI GCATC 5 cut(s) 346, 1144, 2131, 2242, 2431
MaeI CTAG 6 cut(s) 401, 1245, 1508, 1893, 2013, 2193
MaeIII GTNAC 3 cut(s) 545, 1082, 1495
MalI GATC 9 cut(s) 666, 1113, 1243, 1677, 1725, 1897, 2176, 2314, 2434
MboI GATC 9 cut(s) 664, 1111, 1241, 1675, 1723, 1895, 2174, 2312, 2432
MfeI CAATTG 2 cut(s) 360, 779
MflI RGATCY 4 cut(s) 664, 1241, 1895, 2312
MhlI GDGCHC 6 cut(s) 128, 235, 492, 816, 1610, 2350
MlyI GAGTC 9 cut(s) 58, 68, 70, 110, 456, 710, 1868, 1925, 2141
MmeI TCCRAC 3 cut(s) 84, 642, 1471
Mph1103I ATGCAT 1 cut(s) 984
MroI TCCGGA 1 cut(s) 1672
MroXI GAANNNNTTC 2 cut(s) 684, 1252
MseI TTAA 9 cut(s) 368, 846, 1062, 1193, 1301, 1559, 1962, 2181, 2280
MslI CAYNNNNRTG 5 cut(s) 920, 965, 1041, 1793, 1871
MspI CCGG 4 cut(s) 235, 397, 1604, 1673
MunI CAATTG 2 cut(s) 360, 779
Mva1269I GAATGC 3 cut(s) 1408, 2275, 2371
MvaI CCWGG 6 cut(s) 526, 840, 856, 1800, 1818, 2117
MvnI CGCG 2 cut(s) 1201, 1564
MwoI GCNNNNNNNGC 8 cut(s) 639, 1804, 2161, 2240, 2300, 2375, 2396, 2417
NciI CCSGG 4 cut(s) 235, 236, 397, 1605
NdeII GATC 9 cut(s) 664, 1111, 1241, 1675, 1723, 1895, 2174, 2312, 2432
NheI GCTAGC 1 cut(s) 400
NlaIV GGNNCC 5 cut(s) 43, 232, 813, 1285, 1640
NmeAIII GCCGAG 2 cut(s) 159, 712
NmuCI GTSAC 2 cut(s) 545, 1082
NruI TCGCGA 1 cut(s) 1201
NsbI TGCGCA 1 cut(s) 2165
NsiI ATGCAT 1 cut(s) 984
NspI RCATGY 4 cut(s) 630, 763, 1040, 1440
NspV TTCGAA 1 cut(s) 1400
PciI ACATGT 2 cut(s) 626, 759
PciSI GCTCTTC 2 cut(s) 116, 871
PcsI WCGNNNNNNNCGW 1 cut(s) 2436
PctI GAATGC 3 cut(s) 1408, 2275, 2371
PdmI GAANNNNTTC 2 cut(s) 684, 1252
PfeI GAWTC 5 cut(s) 269, 350, 565, 1361, 1466
PflFI GACNNNGTC 1 cut(s) 58
PleI GAGTC 9 cut(s) 58, 67, 70, 109, 455, 709, 1867, 1925, 2141
PpsI GAGTC 9 cut(s) 58, 67, 70, 109, 455, 709, 1867, 1925, 2141
PscI ACATGT 2 cut(s) 626, 759
PshBI ATTAAT 1 cut(s) 846
Psp124BI GAGCTC 1 cut(s) 2350
Psp6I CCWGG 6 cut(s) 524, 838, 854, 1798, 1816, 2115
PspGI CCWGG 6 cut(s) 524, 838, 854, 1798, 1816, 2115
PspN4I GGNNCC 5 cut(s) 43, 232, 813, 1285, 1640
PspPI GGNCC 7 cut(s) 42, 192, 250, 264, 384, 768, 1638
PsrI GAACNNNNNNTAC 2 cut(s) 491, 523
PstI CTGCAG 3 cut(s) 946, 2245, 2452
PsuI RGATCY 4 cut(s) 664, 1241, 1895, 2312
PsyI GACNNNGTC 1 cut(s) 58
RruI TCGCGA 1 cut(s) 1201
RsaI GTAC 5 cut(s) 593, 758, 861, 2355, 2460
RsaNI GTAC 5 cut(s) 592, 757, 860, 2354, 2459
RseI CAYNNNNRTG 5 cut(s) 920, 965, 1041, 1793, 1871
SacI GAGCTC 1 cut(s) 2350
SalI GTCGAC 1 cut(s) 61
SapI GCTCTTC 2 cut(s) 116, 871
SaqAI TTAA 9 cut(s) 368, 846, 1062, 1193, 1301, 1559, 1962, 2181, 2280
Sau3AI GATC 9 cut(s) 664, 1111, 1241, 1675, 1723, 1895, 2174, 2312, 2432
Sau96I GGNCC 7 cut(s) 42, 192, 250, 264, 384, 768, 1638
SchI GAGTC 9 cut(s) 58, 68, 70, 110, 456, 710, 1868, 1925, 2141
SduI GDGCHC 6 cut(s) 128, 235, 492, 816, 1610, 2350
SfaNI GCATC 5 cut(s) 346, 1144, 2131, 2242, 2431
SfcI CTRYAG 4 cut(s) 942, 1329, 2241, 2448
SfuI TTCGAA 1 cut(s) 1400
SinI GGWCC 5 cut(s) 42, 192, 384, 768, 1638
SmaI CCCGGG 1 cut(s) 236
SmiMI CAYNNNNRTG 5 cut(s) 920, 965, 1041, 1793, 1871
SmlI CTYRAG 3 cut(s) 452, 491, 1664
SmoI CTYRAG 3 cut(s) 452, 491, 1664
SsiI CCGC 6 cut(s) 253, 256, 404, 1406, 2300, 2332
SspMI CTAG 6 cut(s) 401, 1245, 1508, 1893, 2013, 2193
SstI GAGCTC 1 cut(s) 2350
StyI CCWWGG 1 cut(s) 1287
TaaI ACNGT 7 cut(s) 1082, 1131, 1177, 1616, 1769, 1838, 1976
TaqI TCGA 7 cut(s) 62, 445, 746, 764, 1385, 1400, 1678
TaqII GACCGA 3 cut(s) 88, 427, 541
TatI WGTACW 2 cut(s) 756, 2458
TauI GCSGC 3 cut(s) 255, 258, 2303
TfiI GAWTC 5 cut(s) 269, 350, 565, 1361, 1466
Tru1I TTAA 9 cut(s) 368, 846, 1062, 1193, 1301, 1559, 1962, 2181, 2280
Tru9I TTAA 9 cut(s) 368, 846, 1062, 1193, 1301, 1559, 1962, 2181, 2280
TscAI CASTG 8 cut(s) 547, 640, 1073, 1087, 1182, 1398, 1450, 2145
TseFI GTSAC 2 cut(s) 545, 1082
Tsp45I GTSAC 2 cut(s) 545, 1082
TspDTI ATGAA 5 cut(s) 696, 904, 1218, 1735, 2087
TspGWI ACGGA 3 cut(s) 243, 1285, 1833
TspMI CCCGGG 1 cut(s) 234
TspRI CASTG 8 cut(s) 547, 640, 1073, 1087, 1182, 1398, 1450, 2145
Tth111I GACNNNGTC 1 cut(s) 58
VpaK11BI GGWCC 5 cut(s) 42, 192, 384, 768, 1638
VspI ATTAAT 1 cut(s) 846
XagI CCTNNNNNAGG 1 cut(s) 1797
XapI RAATTY 2 cut(s) 154, 1450
XbaI TCTAGA 2 cut(s) 1244, 1892
XceI RCATGY 4 cut(s) 630, 763, 1040, 1440
XmaI CCCGGG 1 cut(s) 234
XmiI GTMKAC 2 cut(s) 62, 715
XmnI GAANNNNTTC 2 cut(s) 684, 1252
XspI CTAG 6 cut(s) 401, 1245, 1508, 1893, 2013, 2193
Zsp2I ATGCAT 1 cut(s) 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.