Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000117.1

Orthogroup ID

OG0008000

Physical Location & Seq

Genomic Coordinates Forward (+)

160266 .. 163982

Gene Structure 3717 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000117.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

atgaggctggcgtcgccgttttctgagattgagagtttcgggtccgagtttgggactgagtcgactcggagatcgactcggagacgacgggctgcgagggagtcgaggaggaggccgagagtggtggtgcttcggaatttgaggaaggaaatgccatcggtggagatgaggaggaccacgagggttttcgggatggggaagggggtggacggagcccgagtcttgcgttcgggccgccgcctctggcccgagtcctctgtggtcaagcatgagagaaccaacgaggacgaggactggttcaagctcatcaagaacaatggggaaggtcgtgattctgacgcaattggtttaaagcataagggatggaccagagccacccggctagcgggtcataagcctaagccgaatatagttgtttccgtcagtcgagtccttgagaagcctgttgagactaagcttttggctgatgggctcaagcagtataagaggttcgggattgtatataccaggaagaggaaacggaccggtcactcggtcaatgttgtggagaatcaaagtggctctgaggatagaatgtacgggcagaggtttgctaggaagaggaggaagacaagtggcagtggcagcttggtaggagctgagaggttggatcttgcaagccctgaagtgcttcacattacatttgagtcttcatggggcagacgaaactgggctgctcggcttttgtattcgattttggtgtacatgtcgaggtccagcctgcagttgactgagctttctcaattccttgtctcggagcccctcagcattgtttttgccttgcctggcattaatttttcctgggtacgttcttccactattggctctggagtttgcaagttctttgggagcaaggagttcatgccaatgttttctgtggacttttctgcagttcctcaatgtttcacgctcatgcactccgaaatgcattttagatacatttttcggccaattcttcctgtaaattatctcaatgatgggcatgtagatgatgatgatgatgatgatgttaatcagtgtggcaatgacagtaatgagtgtgtagtcttgcatgaggttgatcacgccgaaaacagaccgttgcatccggttgtaaaagttcccaaattaggttgtagaagcacagtgtataggaatggtttaagttcacgaggtggtattcaaaagaggaggagttcattgaggaggaggagatctagaaatccttcttttgttgctttacggaaaccaaatggagccttggtttcagaattaaagaagaatggcctttccttttcttctgtagccttgaatcagaagcttaggaggtcagattcaacttgctctgcaacgaactcgaaagcagtgagttccaatgcggatagattggtgcaagatttagattcgacatgctgcactgcaaacttattggtctctgaatcagacagatgttatagggaagttggagtaaccattatgctagaaacctcttctgctggagagtggcttcttgtggtcaagaaagatggattaacgcgacttactcacaaagcagagaaagagaaagtaataaggccgggctctaaccgttttacacatgatataatctggtccccagatagtgatattttgaggctagagtttccggatcgaagtgagtggattactttcaaggagctttacagggaatgttctgatcgtaatgccaccattgagttcattcctgagcctgcttctgaccgtaatgccactgcaaaatccattcctgtgccaggggtgcgtgaagtcccaggttatgcagatagccacagttctccgtttctcataccagagtcatacatatctgtgaaggaagatgagttgtctagatcctttgcaaagaagacggcgaattatgacatggactctgaagatgaggaatggctgaagaagtctaacgtggactttgaagatcatgaacatgtttctgaggataaatttgaattaatggttgatgcctttgagaaggcattttacagtaaaccatatgatttctctgatggaattgctgctgctagtcattttctggacatggggaagagggatgtagtagaagctgtatatagttattggatgaataaaaggaagcagaaaaagtcgtcattgcttagggtcttccaggggcatcaagtgaaaagaccactgctggactccaagcctgttatgcgcaagagaagatcattcaaacgacagcctagtcaatttggcagaggaaaacaacctagtttcttgcaagcaatggctgcagaacaagatgctttgcaagaacagaatgctgtgcttaaagttgaagaggcgaaagcagcagcagacagatctgtggatttagctatccgtaaacgacagagagctcaggtacttatgcagaatgcagatttggcaacttacaaagctgcaatggcatttagaattgctgaagctgcccaagttcttggatcacccgatgctgctgcagtttatgtacttgattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EPL1

Protein Analysis

842

Amino Acids

95.58

Weight (kDa)

9.63

Isoelectric Point (pI)

59.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008000)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04670 AT5G04670
fragaria_vesca	FvH4_7g05840 FvH4_7g05840 FvH4_7g05840
malus_domestica	MD02G1255000.v1.1 MD07G1067000.v1.1
prunus_persica	Prupe.2G084200_v2.0.a1 Prupe.2G084200_v2.0.a1
pyrus_communis	pycom02g21480 pycom07g05120
rosa_chinensis	RchiOBHm_Chr1g0332951
rosa_laevigata	RLG00000029631
rosa_multiflora	Rmu_co8256169.1_g000001 Rmu_co8522447.1_g000001 Rmu_sc0000117.1_g000032 Rmu_sc0000813.1_g000011
rosa_roxburghii	Rroxscaffold_4G00317850
rosa_rugosa	Rorug01G0106100
rosa_samantha	Rh1AG129300 Rh1BG098500 Rh1CG123200 Rh1DG135100
rosa_wichuraiana	Rw1G010370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2253
Acc16I	TGCGCA	1 cut(s)	2225
AccI	GTMKAC	1 cut(s)	62
AccII	CGCG	1 cut(s)	1555
AccIII	TCCGGA	1 cut(s)	1663
AciI	CCGC	4 cut(s)	235, 238, 386, 1397
AclWI	GGATC	4 cut(s)	657, 1674, 1881, 2500
AcoI	YGGCCR	1 cut(s)	986
AcsI	RAATTY	2 cut(s)	136, 1994
AcuI	CTGAAG	4 cut(s)	684, 1947, 1964, 2493
AcyI	GRCGYC	1 cut(s)	11
AdeI	CACNNNGTG	1 cut(s)	1193
AfaI	GTAC	5 cut(s)	578, 743, 846, 2415, 2520
AfiI	CCNNNNNNNGG	6 cut(s)	51, 385, 513, 793, 1148, 1790
AflIII	ACRYGT	2 cut(s)	744, 1978
AgeI	ACCGGT	1 cut(s)	524
AgsI	TTSAA	9 cut(s)	301, 1202, 1330, 1356, 1690, 1967, 2000, 2242, 2348
AjnI	CCWGG	6 cut(s)	506, 823, 839, 1789, 1807, 2175
AjuI	GAANNNNNNNTTGG	2 cut(s)	2417, 2449
Alw21I	GWGCWC	1 cut(s)	2410
Alw26I	GTCTC	4 cut(s)	76, 443, 796, 1456
AlwI	GGATC	4 cut(s)	657, 1674, 1881, 2500
Ama87I	CYCGRG	2 cut(s)	216, 248
Aor13HI	TCCGGA	1 cut(s)	1663
AoxI	GGCC	6 cut(s)	113, 232, 245, 986, 1303, 1592
ApoI	RAATTY	2 cut(s)	136, 1994
ArsI	GACNNNNNNTTYG	2 cut(s)	442, 474
AseI	ATTAAT	2 cut(s)	831, 2003
AsiGI	ACCGGT	1 cut(s)	524
Asp700I	GAANNNNTTC	2 cut(s)	669, 1243
AspLEI	GCGC	1 cut(s)	2226
AspS9I	GGNCC	8 cut(s)	42, 174, 232, 246, 366, 522, 753, 1629
AsuC2I	CCSGG	2 cut(s)	379, 1596
AsuHPI	GGTGA	1 cut(s)	2487
AsuNHI	GCTAGC	1 cut(s)	382
AvaI	CYCGRG	2 cut(s)	216, 248
AvaII	GGWCC	6 cut(s)	42, 174, 366, 522, 753, 1629
BanII	GRGCYC	5 cut(s)	217, 474, 801, 1601, 2410
BarI	GAAGNNNNNNTAC	2 cut(s)	2015, 2047
BauI	CACGAG	2 cut(s)	178, 1188
BbsI	GAAGAC	4 cut(s)	614, 681, 1907, 2164
Bbv12I	GWGCWC	1 cut(s)	2410
BbvCI	CCTCAGC	1 cut(s)	803
BccI	CCATC	7 cut(s)	163, 187, 357, 461, 1010, 1538, 2051
BceAI	ACGGC	1 cut(s)	1920
BcgI	CGANNNNNNTGC	4 cut(s)	1356, 1390, 2489, 2523
BciT130I	CCWGG	6 cut(s)	508, 825, 841, 1791, 1809, 2177
BclI	TGATCA	1 cut(s)	1099
BcnI	CCSGG	2 cut(s)	379, 1596
BcoDI	GTCTC	4 cut(s)	76, 443, 796, 1456
BfaI	CTAG	9 cut(s)	383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
BfmI	CTRYAG	5 cut(s)	761, 927, 1320, 2301, 2508
BglII	AGATCT	2 cut(s)	1232, 2372
Bme1390I	CCNGG	8 cut(s)	379, 508, 825, 841, 1596, 1791, 1809, 2177
Bme18I	GGWCC	6 cut(s)	42, 174, 366, 522, 753, 1629
BmeT110I	CYCGRG	2 cut(s)	216, 248
BmgT120I	GGNCC	8 cut(s)	42, 174, 232, 246, 366, 522, 753, 1629
BmiI	GGNNCC	5 cut(s)	43, 214, 798, 1276, 1631
BmrFI	CCNGG	8 cut(s)	379, 508, 825, 841, 1596, 1791, 1809, 2177
BmrI	ACTGGG	1 cut(s)	718
BmsI	GCATC	5 cut(s)	1132, 2002, 2191, 2302, 2491
BmtI	GCTAGC	1 cut(s)	386
BmuI	ACTGGG	1 cut(s)	718
BpiI	GAAGAC	4 cut(s)	614, 681, 1907, 2164
BplI	GAGNNNNNCTC	2 cut(s)	61, 93
BpmI	CTGGAG	2 cut(s)	888, 1536
Bpu10I	CCTNAGC	6 cut(s)	399, 803, 1340, 1743, 2165, 2409
BpuEI	CTTGAG	2 cut(s)	455, 458
BpuMI	CCSGG	2 cut(s)	379, 1596
BsaBI	GATNNNNATC	1 cut(s)	1050
BsaHI	GRCGYC	1 cut(s)	11
BsaI	GGTCTC	1 cut(s)	1456
BsaJI	CCNNGG	5 cut(s)	840, 1278, 1790, 1807, 2176
BsaWI	WCCGGW	3 cut(s)	524, 1126, 1663
BsaXI	ACNNNNNCTCC	4 cut(s)	204, 234, 1266, 1296
Bsc4I	CCNNNNNNNGG	6 cut(s)	51, 385, 513, 793, 1148, 1790
Bse118I	RCCGGY	1 cut(s)	524
Bse1I	ACTGG	2 cut(s)	299, 713
Bse3DI	GCAATG	4 cut(s)	1069, 2159, 2301, 2460
Bse8I	GATNNNNATC	1 cut(s)	1050
BseAI	TCCGGA	1 cut(s)	1663
BseBI	CCWGG	6 cut(s)	508, 825, 841, 1791, 1809, 2177
BseDI	CCNNGG	5 cut(s)	840, 1278, 1790, 1807, 2176
BseGI	GGATG	5 cut(s)	198, 368, 1123, 2107, 2136
BseJI	GATNNNNATC	1 cut(s)	1050
BseLI	CCNNNNNNNGG	6 cut(s)	51, 385, 513, 793, 1148, 1790
BseMI	GCAATG	4 cut(s)	1069, 2159, 2301, 2460
BseMII	CTCAG	9 cut(s)	15, 48, 555, 630, 762, 817, 1734, 1977, 2423
BseNI	ACTGG	2 cut(s)	299, 713
BseRI	GAGGAG	9 cut(s)	121, 124, 184, 616, 1222, 1225, 1237, 1240, 1243
BsgI	GTGCAG	1 cut(s)	1417
Bsh1236I	CGCG	1 cut(s)	1555
BshFI	GGCC	6 cut(s)	115, 234, 247, 988, 1305, 1594
BshTI	ACCGGT	1 cut(s)	524
BsiHKAI	GWGCWC	1 cut(s)	2410
BsiHKCI	CYCGRG	2 cut(s)	216, 248
BsiSI	CCGG	5 cut(s)	379, 525, 1127, 1595, 1664
BslFI	GGGAC	3 cut(s)	67, 1615, 1790
BslI	CCNNNNNNNGG	6 cut(s)	51, 385, 513, 793, 1148, 1790
BsmAI	GTCTC	4 cut(s)	76, 443, 796, 1456
BsmBI	CGTCTC	1 cut(s)	76
BsmFI	GGGAC	3 cut(s)	67, 1615, 1790
BsmI	GAATGC	2 cut(s)	2335, 2431
BsnI	GGCC	6 cut(s)	115, 234, 247, 988, 1305, 1594
Bso31I	GGTCTC	1 cut(s)	1456
BsoBI	CYCGRG	2 cut(s)	216, 248
Bsp1286I	GDGCHC	5 cut(s)	217, 474, 801, 1601, 2410
Bsp13I	TCCGGA	1 cut(s)	1663
Bsp1407I	TGTACA	1 cut(s)	741
BspACI	CCGC	4 cut(s)	235, 238, 386, 1397
BspANI	GGCC	6 cut(s)	115, 234, 247, 988, 1305, 1594
BspCNI	CTCAG	9 cut(s)	16, 49, 556, 631, 763, 816, 1735, 1978, 2422
BspEI	TCCGGA	1 cut(s)	1663
BspFNI	CGCG	1 cut(s)	1555
BspHI	TCATGA	1 cut(s)	1972
BspLI	GGNNCC	5 cut(s)	43, 214, 798, 1276, 1631
BspMAI	CTGCAG	4 cut(s)	765, 931, 2305, 2512
BspOI	GCTAGC	1 cut(s)	386
BspPI	GGATC	4 cut(s)	657, 1674, 1881, 2500
BspTNI	GGTCTC	1 cut(s)	1456
BsrDI	GCAATG	4 cut(s)	1069, 2159, 2301, 2460
BsrFI	RCCGGY	1 cut(s)	524
BsrGI	TGTACA	1 cut(s)	741
BsrI	ACTGG	2 cut(s)	299, 713
BssAI	RCCGGY	1 cut(s)	524
BssECI	CCNNGG	5 cut(s)	840, 1278, 1790, 1807, 2176
BssNI	GRCGYC	1 cut(s)	11
BssSI	CACGAG	2 cut(s)	178, 1188
BssT1I	CCWWGG	1 cut(s)	1278
Bst2BI	CACGAG	2 cut(s)	178, 1188
Bst2UI	CCWGG	6 cut(s)	508, 825, 841, 1791, 1809, 2177
Bst4CI	ACNGT	7 cut(s)	1070, 1119, 1165, 1607, 1760, 1829, 2036
Bst6I	CTCTTC	5 cut(s)	506, 593, 1513, 2090, 2343
BstACI	GRCGYC	1 cut(s)	11
BstAPI	GCANNNNNTGC	1 cut(s)	2300
BstAUI	TGTACA	1 cut(s)	741
BstC8I	GCNNGC	6 cut(s)	9, 384, 658, 761, 1749, 2292
BstENI	CCTNNNNNAGG	1 cut(s)	1788
BstF5I	GGATG	5 cut(s)	198, 368, 1123, 2107, 2136
BstFNI	CGCG	1 cut(s)	1555
BstHHI	GCGC	1 cut(s)	2226
BstMAI	GTCTC	4 cut(s)	76, 443, 796, 1456
BstMWI	GCNNNNNNNGC	9 cut(s)	13, 624, 1795, 2221, 2300, 2360, 2435, 2456, 2477
BstNI	CCWGG	6 cut(s)	508, 825, 841, 1791, 1809, 2177
BstNSI	RCATGY	4 cut(s)	748, 1025, 1431, 1982
BstSCI	CCNGG	8 cut(s)	377, 506, 823, 839, 1594, 1789, 1807, 2175
BstSFI	CTRYAG	5 cut(s)	761, 927, 1320, 2301, 2508
BstUI	CGCG	1 cut(s)	1555
BstV2I	GAAGAC	4 cut(s)	614, 681, 1907, 2164
BstX2I	RGATCY	4 cut(s)	649, 1232, 1886, 2372
BstXI	CCANNNNNNTGG	1 cut(s)	2489
BstYI	RGATCY	4 cut(s)	649, 1232, 1886, 2372
BsuRI	GGCC	6 cut(s)	115, 234, 247, 988, 1305, 1594
BtsCI	GGATG	5 cut(s)	198, 368, 1123, 2107, 2136
BtsI	GCAGTG	5 cut(s)	625, 1389, 1434, 1767, 2198
BtsIMutI	CAGTG	7 cut(s)	625, 1061, 1170, 1389, 1434, 1767, 2198
Cac8I	GCNNGC	6 cut(s)	9, 384, 658, 761, 1749, 2292
CciI	TCATGA	1 cut(s)	1972
CfoI	GCGC	1 cut(s)	2226
Cfr10I	RCCGGY	1 cut(s)	524
Cfr13I	GGNCC	8 cut(s)	42, 174, 232, 246, 366, 522, 753, 1629
CpoI	CGGWCCG	1 cut(s)	522
CseI	GACGC	1 cut(s)	347
Csp6I	GTAC	5 cut(s)	577, 742, 845, 2414, 2519
CspAI	ACCGGT	1 cut(s)	524
CspI	CGGWCCG	1 cut(s)	522
CviQI	GTAC	5 cut(s)	577, 742, 845, 2414, 2519
DraI	TTTAAA	1 cut(s)	351
DraIII	CACNNNGTG	1 cut(s)	1193
DrdI	GACNNNNNNGTC	1 cut(s)	2253
DseDI	GACNNNNNNGTC	1 cut(s)	2253
EaeI	YGGCCR	1 cut(s)	986
Eam1104I	CTCTTC	5 cut(s)	506, 593, 1513, 2090, 2343
EarI	CTCTTC	5 cut(s)	506, 593, 1513, 2090, 2343
Ecl136II	GAGCTC	1 cut(s)	2408
Eco130I	CCWWGG	1 cut(s)	1278
Eco24I	GRGCYC	5 cut(s)	217, 474, 801, 1601, 2410
Eco31I	GGTCTC	1 cut(s)	1456
Eco47I	GGWCC	6 cut(s)	42, 174, 366, 522, 753, 1629
Eco53kI	GAGCTC	1 cut(s)	2408
Eco57I	CTGAAG	4 cut(s)	684, 1947, 1964, 2493
Eco88I	CYCGRG	2 cut(s)	216, 248
EcoICRI	GAGCTC	1 cut(s)	2408
EcoNI	CCTNNNNNAGG	1 cut(s)	1788
EcoRII	CCWGG	6 cut(s)	506, 823, 839, 1789, 1807, 2175
EcoT14I	CCWWGG	1 cut(s)	1278
EcoT22I	ATGCAT	1 cut(s)	969
EcoT38I	GRGCYC	5 cut(s)	217, 474, 801, 1601, 2410
ErhI	CCWWGG	1 cut(s)	1278
Esp3I	CGTCTC	1 cut(s)	76
FaqI	GGGAC	3 cut(s)	67, 1615, 1790
FauI	CCCGC	1 cut(s)	379
FauNDI	CATATG	1 cut(s)	2044
FbaI	TGATCA	1 cut(s)	1099
FblI	GTMKAC	1 cut(s)	62
FokI	GGATG	5 cut(s)	205, 375, 1110, 2114, 2143
FriOI	GRGCYC	5 cut(s)	217, 474, 801, 1601, 2410
FspBI	CTAG	9 cut(s)	383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
FspI	TGCGCA	1 cut(s)	2225
GlaI	GCGC	1 cut(s)	2225
GsuI	CTGGAG	2 cut(s)	888, 1536
HaeIII	GGCC	6 cut(s)	115, 234, 247, 988, 1305, 1594
HapII	CCGG	5 cut(s)	379, 525, 1127, 1595, 1664
HgaI	GACGC	1 cut(s)	347
HhaI	GCGC	1 cut(s)	2226
Hin1I	GRCGYC	1 cut(s)	11
Hin6I	GCGC	1 cut(s)	2224
HinP1I	GCGC	1 cut(s)	2224
HincII	GTYRAC	2 cut(s)	63, 768
HindII	GTYRAC	2 cut(s)	63, 768
HindIII	AAGCTT	2 cut(s)	455, 1337
HpaII	CCGG	5 cut(s)	379, 525, 1127, 1595, 1664
HphI	GGTGA	1 cut(s)	2487
Hpy166II	GTNNAC	9 cut(s)	63, 208, 742, 768, 919, 1187, 1960, 2039, 2396
Hpy8I	GTNNAC	9 cut(s)	63, 208, 742, 768, 919, 1187, 1960, 2039, 2396
Hpy99I	CGWCG	2 cut(s)	16, 90
HpyAV	CCTTC	6 cut(s)	139, 193, 317, 1254, 1861, 2017
HpyCH4III	ACNGT	7 cut(s)	1070, 1119, 1165, 1607, 1760, 1829, 2036
HpyCH4IV	ACGT	2 cut(s)	847, 1956
HpyF10VI	GCNNNNNNNGC	9 cut(s)	13, 624, 1795, 2221, 2300, 2360, 2435, 2456, 2477
HpySE526I	ACGT	2 cut(s)	847, 1956
Hsp92I	GRCGYC	1 cut(s)	11
HspAI	GCGC	1 cut(s)	2224
Kpn2I	TCCGGA	1 cut(s)	1663
Ksp22I	TGATCA	1 cut(s)	1099
LmnI	GCTCC	6 cut(s)	212, 635, 796, 888, 1274, 1693
LweI	GCATC	5 cut(s)	1132, 2002, 2191, 2302, 2491
MaeI	CTAG	9 cut(s)	383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
MaeII	ACGT	2 cut(s)	847, 1956
MaeIII	GTNAC	2 cut(s)	527, 1486
MfeI	CAATTG	1 cut(s)	342
MflI	RGATCY	4 cut(s)	649, 1232, 1886, 2372
MhlI	GDGCHC	5 cut(s)	217, 474, 801, 1601, 2410
MmeI	TCCRAC	2 cut(s)	627, 1462
Mph1103I	ATGCAT	1 cut(s)	969
MroI	TCCGGA	1 cut(s)	1663
MroXI	GAANNNNTTC	2 cut(s)	669, 1243
MseI	TTAA	8 cut(s)	350, 831, 1050, 1181, 1292, 1550, 2003, 2340
MslI	CAYNNNNRTG	6 cut(s)	905, 950, 1026, 1784, 1862, 1977
MspI	CCGG	5 cut(s)	379, 525, 1127, 1595, 1664
MspR9I	CCNGG	8 cut(s)	379, 508, 825, 841, 1596, 1791, 1809, 2177
MunI	CAATTG	1 cut(s)	342
Mva1269I	GAATGC	2 cut(s)	2335, 2431
MvaI	CCWGG	6 cut(s)	508, 825, 841, 1791, 1809, 2177
MvnI	CGCG	1 cut(s)	1555
MwoI	GCNNNNNNNGC	9 cut(s)	13, 624, 1795, 2221, 2300, 2360, 2435, 2456, 2477
NciI	CCSGG	2 cut(s)	379, 1596
NdeI	CATATG	1 cut(s)	2044
NheI	GCTAGC	1 cut(s)	382
NlaIV	GGNNCC	5 cut(s)	43, 214, 798, 1276, 1631
NmeAIII	GCCGAG	2 cut(s)	141, 697
NmuCI	GTSAC	1 cut(s)	527
NsbI	TGCGCA	1 cut(s)	2225
NsiI	ATGCAT	1 cut(s)	969
NspI	RCATGY	4 cut(s)	748, 1025, 1431, 1982
PagI	TCATGA	1 cut(s)	1972
PciI	ACATGT	2 cut(s)	744, 1978
PctI	GAATGC	2 cut(s)	2335, 2431
PdmI	GAANNNNTTC	2 cut(s)	669, 1243
PfeI	GAWTC	6 cut(s)	332, 550, 1330, 1352, 1421, 1457
PflFI	GACNNNGTC	1 cut(s)	58
PinAI	ACCGGT	1 cut(s)	524
PscI	ACATGT	2 cut(s)	744, 1978
PshBI	ATTAAT	2 cut(s)	831, 2003
Psp124BI	GAGCTC	1 cut(s)	2410
Psp6I	CCWGG	6 cut(s)	506, 823, 839, 1789, 1807, 2175
PspGI	CCWGG	6 cut(s)	506, 823, 839, 1789, 1807, 2175
PspN4I	GGNNCC	5 cut(s)	43, 214, 798, 1276, 1631
PspPI	GGNCC	8 cut(s)	42, 174, 232, 246, 366, 522, 753, 1629
PsrI	GAACNNNNNNTAC	2 cut(s)	473, 505
PstI	CTGCAG	4 cut(s)	765, 931, 2305, 2512
PsuI	RGATCY	4 cut(s)	649, 1232, 1886, 2372
PsyI	GACNNNGTC	1 cut(s)	58
RsaI	GTAC	5 cut(s)	578, 743, 846, 2415, 2520
RsaNI	GTAC	5 cut(s)	577, 742, 845, 2414, 2519
RseI	CAYNNNNRTG	6 cut(s)	905, 950, 1026, 1784, 1862, 1977
Rsr2I	CGGWCCG	1 cut(s)	522
RsrII	CGGWCCG	1 cut(s)	522
SacI	GAGCTC	1 cut(s)	2410
SalI	GTCGAC	1 cut(s)	61
SaqAI	TTAA	8 cut(s)	350, 831, 1050, 1181, 1292, 1550, 2003, 2340
Sau96I	GGNCC	8 cut(s)	42, 174, 232, 246, 366, 522, 753, 1629
ScrFI	CCNGG	8 cut(s)	379, 508, 825, 841, 1596, 1791, 1809, 2177
SduI	GDGCHC	5 cut(s)	217, 474, 801, 1601, 2410
SfaNI	GCATC	5 cut(s)	1132, 2002, 2191, 2302, 2491
SfcI	CTRYAG	5 cut(s)	761, 927, 1320, 2301, 2508
SinI	GGWCC	6 cut(s)	42, 174, 366, 522, 753, 1629
SmiMI	CAYNNNNRTG	6 cut(s)	905, 950, 1026, 1784, 1862, 1977
SmlI	CTYRAG	2 cut(s)	434, 473
SmoI	CTYRAG	2 cut(s)	434, 473
SsiI	CCGC	4 cut(s)	235, 238, 386, 1397
SspMI	CTAG	9 cut(s)	383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
SstI	GAGCTC	1 cut(s)	2410
StyD4I	CCNGG	8 cut(s)	377, 506, 823, 839, 1594, 1789, 1807, 2175
StyI	CCWWGG	1 cut(s)	1278
TaaI	ACNGT	7 cut(s)	1070, 1119, 1165, 1607, 1760, 1829, 2036
TaiI	ACGT	2 cut(s)	850, 1959
TaqI	TCGA	9 cut(s)	62, 74, 104, 427, 731, 749, 1376, 1424, 1669
TaqII	GACCGA	1 cut(s)	523
TatI	WGTACW	2 cut(s)	741, 2518
TauI	GCSGC	2 cut(s)	237, 240
TfiI	GAWTC	6 cut(s)	332, 550, 1330, 1352, 1421, 1457
Tru1I	TTAA	8 cut(s)	350, 831, 1050, 1181, 1292, 1550, 2003, 2340
Tru9I	TTAA	8 cut(s)	350, 831, 1050, 1181, 1292, 1550, 2003, 2340
TscAI	CASTG	7 cut(s)	625, 1061, 1170, 1389, 1441, 1774, 2205
TseFI	GTSAC	1 cut(s)	527
Tsp45I	GTSAC	1 cut(s)	527
TspDTI	ATGAA	6 cut(s)	681, 889, 1206, 1726, 1989, 2147
TspGWI	ACGGA	6 cut(s)	225, 409, 535, 1276, 1824, 2381
TspRI	CASTG	7 cut(s)	625, 1061, 1170, 1389, 1441, 1774, 2205
Tth111I	GACNNNGTC	1 cut(s)	58
VpaK11BI	GGWCC	6 cut(s)	42, 174, 366, 522, 753, 1629
VspI	ATTAAT	2 cut(s)	831, 2003
XagI	CCTNNNNNAGG	1 cut(s)	1788
XapI	RAATTY	2 cut(s)	136, 1994
XbaI	TCTAGA	2 cut(s)	1235, 1883
XceI	RCATGY	4 cut(s)	748, 1025, 1431, 1982
XmiI	GTMKAC	1 cut(s)	62
XmnI	GAANNNNTTC	2 cut(s)	669, 1243
XspI	CTAG	9 cut(s)	383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
Zsp2I	ATGCAT	1 cut(s)	969

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.