Rh1CG123200

Enhancer of polycomb-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0008000
Physical Location & Seq
Forward (+)
26912481 .. 26917367
4887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG123200.1

Sequence Viewer

Length: 2397 bp
ATGAGGCCGGCGTCGCCGTTTTCTGAGATTGAGAGTTTCGGGTCCGAGTTTGGGACTGAGTCGACTCGGAGATCGACTCGGAGACGACGGGCTGCGAGGGAGTCGAGGAGGAGGAGGAGGAAGAGCACGAGGAGGCCGAGAGTGGTGGTGCTTCGGAATTTGAGGAAGGAAATGCCATCGGTGGAGATGAGGAGGACCACGAGGGTTTTCGGGATGGGGAAGGGGGTGGACGGAGCCCGAGTCTTGCGTTCGGGCCGCCGCCTCTGGTCCGAATCCTCTGTGGTCAAGCTGGAGAGAACCAACGAGGACGAGGACTGGTTCAAGCTCATCAATAACAATAATGGGGAAGGTCGTGATTCTGATGCAATTGGTTTAAAGCATAAGGGATGGACCAGAGCCGCCCGGCTAGCGGGTCATAAGCCTAAGCCGAATATAGTTGTTTCGGTCAGTCGAGTCCTTGAGAAGCCTGTTGAGACTAAGGTTTTGGCTGATGGGCTCAAGCAGTATAGGAGGTTCGGGATTGTATATACCAGGAAGAGGAAACGGACCGGTCACTCAGTCAATGTGGAGAATCAAAGTGGCTCTGAGGATAGAATGTACGGGCAGAGGTTTGCTAGGAAGAGGAGGAAGACAAGTGGCAGTGGCAGCTTGGTAGGAGCTGAGAGGTTGGATCTTGCGAGCCCTGAAGTGCTTCACATTACATTTGAGTCTTCATGGGGCAGACGAAACTGGGCTGCTCGGCTTTTGTATTCGATTTTGGTGTACATGTCAAGGTCCAGCCTGCAATTGACTGAGCTTTCTCAATTCCTTGTCTCGGAGCCCCTCAGCATTGTTTTTGCCTTGCCTGGCATTAATTTTTCCTGGGTACGTTCTTCTACTATTGGCTCTGGAGTTTGCAAGTTCTTTGGGAGCAAGGAGTTCATGCCAATGTTTTCTGTGGACTTTTCTGCAGTTCCTCAATGTTTCACGCTCATGCACTCCGAAATGCATTTTAGATACATTTTTCGGCCAATTCTTCCTGTAAATTATCTCAATGATGGGCATGTAGATGATGATGATGATGATGTTAATCAGTGTGGCAATGACAGTGAAGAGTGTGTAGTCTTGCATGAGGTTGATCACGCTGAAAACAGACCGTTGCATCCGGTTGTAAAAGTTCCCAAATTAGGTTGTAGAAGCACAGTGTATAGGAATGGTTTAAGTTCACGAGGTGGTATTCAAAAGAGGAGGAGTTCATTGAGGAGGAGGAGATCTAGAAATCCTTCTTTTGTTGCTTTACGGAAACCAAATGGAGCCTTGGTTTCAGAATTAAAGAGGAATGGCCTTTCCTTTTCTTCTGTAGCCTCGAATCAGAAGCTTAGGAGGTCAGATTCAACTTGCTCTGCAACGAACTCGAAAGCAGTGAGTTCGAATGCGGATAGATTGGTGCAAGATTTAGATTCGACATGCTGCACTGCAAACTTATTGGTCTCTGAGTCAGACAGATGTTATAGGGAAGTTGGAGTAACCATTATGCTAGAAACCTCTTCTGCTGGAGAGTGGCTTCTTGTGGTCAAGAAAGATGGATTAACGCGACTTACTCACAAAGCAGAGAAAGAGAAAGTAATAAGGCCGGGCTCTAACCGTTTTACACATGATATAATCTGGTCCCCAGATAGTGATATTTTGAGGCTAGAGTTTCCGGATCGAAGTGAGTGGATTACTTTCAAGGAGCTTTACAGGGAATGTTCTGATCGTAATGCCACCATTGAGTTCATTCCTGAGCCTGCTTCTGACCGTAATGCCACTGCAAAATCCATTCCTGTGCCAGGGGTGCGTGAAGTCCCAGGTTATGCAGATAGCCACAGTTCTCCGTTTCTCATACCAGAGTCGTACATATCTGTGAAGGAAGATGAGGTGTCTAGATCCTTTGCAAAGAAGACGGCGAATTATGACATGGACTCTGAAGATGAGGAATGGCTGAAGAAGTCTAACGTGGACTTTGAAGATCATGAACATGTTTCTGAGGATAAATTTGAATTAATGGTTGATGCCTTTGAGAAGGCATTTTACAGTAAACCATATGATTTCTCTGATGGAATTGCTGCTGCTAGTCATTTTCTGGACATGGGGAAGAGGGATGTAGTAGAAGCTGTATATAGTTATTGGATGAATAAAAGGAAGCAGAAAAAGTCGTCATTGCTTAGGGTCTTCCAGGGGCATCAAGTGAAAAGACCACTGCTGGACTCAAAGCCTGTTATGCGCAAGAGAAGATCATTCAAACGACAGCCTAGTCAATTTGGCAGAGGAAAACAACCTAGTTTCTTGCAAGGTAATTTCACTGCTTTATATGGTTATGCTAGTGGTAAAAATGATTTATACATACGCCATGTGACACTATTTGTAATAAGCCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EPL1

Protein Analysis

798

Amino Acids

91.16

Weight (kDa)

9.83

Isoelectric Point (pI)

63.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EPL1 PF10513 577 - 681 1.9e-13 Enhancer of polycomb-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2271
Acc16I TGCGCA 1 cut(s) 2243
AccI GTMKAC 1 cut(s) 62
AccII CGCG 1 cut(s) 1573
AccIII TCCGGA 1 cut(s) 1681
AciI CCGC 5 cut(s) 256, 259, 399, 410, 1415
AclWI GGATC 3 cut(s) 678, 1692, 1899
AcoI YGGCCR 1 cut(s) 1007
AcsI RAATTY 2 cut(s) 157, 2012
AcuI CTGAAG 3 cut(s) 705, 1965, 1982
AcyI GRCGYC 1 cut(s) 11
AdeI CACNNNGTG 1 cut(s) 1211
AfaI GTAC 4 cut(s) 599, 764, 867, 1874
AfiI CCNNNNNNNGG 6 cut(s) 51, 409, 537, 814, 1166, 1808
AflIII ACRYGT 2 cut(s) 765, 1996
AgeI ACCGGT 1 cut(s) 548
AgsI TTSAA 7 cut(s) 322, 1220, 1374, 1708, 1985, 2018, 2260
AjnI CCWGG 6 cut(s) 530, 844, 860, 1807, 1825, 2193
AluBI AGCT 8 cut(s) 289, 325, 648, 659, 796, 1357, 1714, 2132
AluI AGCT 8 cut(s) 289, 325, 648, 659, 796, 1357, 1714, 2132
Alw21I GWGCWC 1 cut(s) 128
Alw26I GTCTC 4 cut(s) 76, 467, 817, 1474
AlwI GGATC 3 cut(s) 678, 1692, 1899
Ama87I CYCGRG 1 cut(s) 237
Aor13HI TCCGGA 1 cut(s) 1681
AoxI GGCC 6 cut(s) 5, 134, 253, 1007, 1321, 1610
ApeKI GCWGC 6 cut(s) 92, 645, 734, 1449, 2084, 2087
ApoI RAATTY 2 cut(s) 157, 2012
ArsI GACNNNNNNTTYG 2 cut(s) 466, 498
AseI ATTAAT 2 cut(s) 852, 2021
AsiGI ACCGGT 1 cut(s) 548
Asp700I GAANNNNTTC 2 cut(s) 690, 1261
AspLEI GCGC 1 cut(s) 2244
AspS9I GGNCC 8 cut(s) 42, 195, 253, 267, 390, 546, 774, 1647
AsuC2I CCSGG 2 cut(s) 403, 1614
AsuII TTCGAA 1 cut(s) 1409
AsuNHI GCTAGC 1 cut(s) 406
AvaI CYCGRG 1 cut(s) 237
AvaII GGWCC 7 cut(s) 42, 195, 267, 390, 546, 774, 1647
BanII GRGCYC 5 cut(s) 238, 498, 683, 822, 1619
BarI GAAGNNNNNNTAC 2 cut(s) 2033, 2065
BauI CACGAG 3 cut(s) 127, 199, 1206
BbsI GAAGAC 4 cut(s) 635, 702, 1925, 2182
Bbv12I GWGCWC 1 cut(s) 128
BbvCI CCTCAGC 1 cut(s) 824
BbvI GCAGC 6 cut(s) 79, 657, 721, 1436, 2071, 2074
BccI CCATC 7 cut(s) 184, 208, 381, 485, 1031, 1556, 2069
BceAI ACGGC 1 cut(s) 1938
BcgI CGANNNNNNTGC 4 cut(s) 1374, 1389, 1408, 1423
BciT130I CCWGG 6 cut(s) 532, 846, 862, 1809, 1827, 2195
BclI TGATCA 1 cut(s) 1117
BcnI CCSGG 2 cut(s) 403, 1614
BcoDI GTCTC 4 cut(s) 76, 467, 817, 1474
BfmI CTRYAG 2 cut(s) 948, 1338
BglII AGATCT 1 cut(s) 1250
BisI GCNGC 9 cut(s) 93, 256, 259, 399, 646, 735, 1450, 2085, 2088
BlsI GCNGC 9 cut(s) 94, 257, 260, 400, 647, 736, 1451, 2086, 2089
Bme1390I CCNGG 8 cut(s) 403, 532, 846, 862, 1614, 1809, 1827, 2195
Bme18I GGWCC 7 cut(s) 42, 195, 267, 390, 546, 774, 1647
BmeT110I CYCGRG 1 cut(s) 237
BmgT120I GGNCC 8 cut(s) 42, 195, 253, 267, 390, 546, 774, 1647
BmiI GGNNCC 5 cut(s) 43, 235, 819, 1294, 1649
BmrFI CCNGG 8 cut(s) 403, 532, 846, 862, 1614, 1809, 1827, 2195
BmrI ACTGGG 1 cut(s) 739
BmsI GCATC 4 cut(s) 352, 1150, 2020, 2209
BmtI GCTAGC 1 cut(s) 410
BmuI ACTGGG 1 cut(s) 739
BpiI GAAGAC 4 cut(s) 635, 702, 1925, 2182
BplI GAGNNNNNCTC 2 cut(s) 61, 93
BpmI CTGGAG 3 cut(s) 311, 909, 1554
Bpu10I CCTNAGC 5 cut(s) 423, 824, 1358, 1761, 2183
Bpu14I TTCGAA 1 cut(s) 1409
BpuEI CTTGAG 2 cut(s) 479, 482
BpuMI CCSGG 2 cut(s) 403, 1614
BsaBI GATNNNNATC 1 cut(s) 1068
BsaHI GRCGYC 1 cut(s) 11
BsaI GGTCTC 1 cut(s) 1474
BsaJI CCNNGG 5 cut(s) 861, 1296, 1808, 1825, 2194
BsaWI WCCGGW 3 cut(s) 548, 1144, 1681
BsaXI ACNNNNNCTCC 4 cut(s) 225, 255, 1284, 1314
Bsc4I CCNNNNNNNGG 6 cut(s) 51, 409, 537, 814, 1166, 1808
Bse118I RCCGGY 2 cut(s) 7, 548
Bse1I ACTGG 2 cut(s) 320, 734
Bse3DI GCAATG 2 cut(s) 1087, 2177
Bse8I GATNNNNATC 1 cut(s) 1068
BseAI TCCGGA 1 cut(s) 1681
BseBI CCWGG 6 cut(s) 532, 846, 862, 1809, 1827, 2195
BseDI CCNNGG 5 cut(s) 861, 1296, 1808, 1825, 2194
BseGI GGATG 5 cut(s) 219, 392, 1141, 2125, 2154
BseJI GATNNNNATC 1 cut(s) 1068
BseLI CCNNNNNNNGG 6 cut(s) 51, 409, 537, 814, 1166, 1808
BseMI GCAATG 2 cut(s) 1087, 2177
BseNI ACTGG 2 cut(s) 320, 734
BseXI GCAGC 6 cut(s) 79, 657, 721, 1436, 2071, 2074
BsgI GTGCAG 1 cut(s) 1435
Bsh1236I CGCG 1 cut(s) 1573
BshFI GGCC 6 cut(s) 7, 136, 255, 1009, 1323, 1612
BshTI ACCGGT 1 cut(s) 548
BsiHKAI GWGCWC 1 cut(s) 128
BsiHKCI CYCGRG 1 cut(s) 237
BsiSI CCGG 6 cut(s) 8, 403, 549, 1145, 1613, 1682
BslFI GGGAC 3 cut(s) 67, 1633, 1808
BslI CCNNNNNNNGG 6 cut(s) 51, 409, 537, 814, 1166, 1808
BsmAI GTCTC 4 cut(s) 76, 467, 817, 1474
BsmBI CGTCTC 1 cut(s) 76
BsmFI GGGAC 3 cut(s) 67, 1633, 1808
BsmI GAATGC 1 cut(s) 1417
BsnI GGCC 6 cut(s) 7, 136, 255, 1009, 1323, 1612
Bso31I GGTCTC 1 cut(s) 1474
BsoBI CYCGRG 1 cut(s) 237
Bsp119I TTCGAA 1 cut(s) 1409
Bsp1286I GDGCHC 6 cut(s) 128, 238, 498, 683, 822, 1619
Bsp13I TCCGGA 1 cut(s) 1681
Bsp1407I TGTACA 1 cut(s) 762
Bsp143I GATC 9 cut(s) 71, 670, 1117, 1250, 1684, 1732, 1904, 1987, 2252
BspACI CCGC 5 cut(s) 256, 259, 399, 410, 1415
BspANI GGCC 6 cut(s) 7, 136, 255, 1009, 1323, 1612
BspEI TCCGGA 1 cut(s) 1681
BspFNI CGCG 1 cut(s) 1573
BspHI TCATGA 1 cut(s) 1990
BspLI GGNNCC 5 cut(s) 43, 235, 819, 1294, 1649
BspMAI CTGCAG 1 cut(s) 952
BspOI GCTAGC 1 cut(s) 410
BspPI GGATC 3 cut(s) 678, 1692, 1899
BspQI GCTCTTC 1 cut(s) 116
BspT104I TTCGAA 1 cut(s) 1409
BspTNI GGTCTC 1 cut(s) 1474
BsrDI GCAATG 2 cut(s) 1087, 2177
BsrFI RCCGGY 2 cut(s) 7, 548
BsrGI TGTACA 1 cut(s) 762
BsrI ACTGG 2 cut(s) 320, 734
BssAI RCCGGY 2 cut(s) 7, 548
BssECI CCNNGG 5 cut(s) 861, 1296, 1808, 1825, 2194
BssMI GATC 9 cut(s) 71, 670, 1117, 1250, 1684, 1732, 1904, 1987, 2252
BssNI GRCGYC 1 cut(s) 11
BssSI CACGAG 3 cut(s) 127, 199, 1206
BssT1I CCWWGG 1 cut(s) 1296
Bst2BI CACGAG 3 cut(s) 127, 199, 1206
Bst2UI CCWGG 6 cut(s) 532, 846, 862, 1809, 1827, 2195
Bst4CI ACNGT 7 cut(s) 1088, 1137, 1183, 1625, 1778, 1847, 2054
Bst6I CTCTTC 6 cut(s) 116, 530, 614, 1086, 1531, 2108
BstACI GRCGYC 1 cut(s) 11
BstAUI TGTACA 1 cut(s) 762
BstBI TTCGAA 1 cut(s) 1409
BstC8I GCNNGC 5 cut(s) 9, 408, 679, 782, 1767
BstENI CCTNNNNNAGG 1 cut(s) 1806
BstF5I GGATG 5 cut(s) 219, 392, 1141, 2125, 2154
BstFNI CGCG 1 cut(s) 1573
BstHHI GCGC 1 cut(s) 2244
BstKTI GATC 9 cut(s) 74, 673, 1120, 1253, 1687, 1735, 1907, 1990, 2255
BstMAI GTCTC 4 cut(s) 76, 467, 817, 1474
BstMBI GATC 9 cut(s) 71, 670, 1117, 1250, 1684, 1732, 1904, 1987, 2252
BstMWI GCNNNNNNNGC 5 cut(s) 13, 407, 645, 1813, 2239
BstNI CCWGG 6 cut(s) 532, 846, 862, 1809, 1827, 2195
BstNSI RCATGY 4 cut(s) 769, 1046, 1449, 2000
BstSCI CCNGG 8 cut(s) 401, 530, 844, 860, 1612, 1807, 1825, 2193
BstSFI CTRYAG 2 cut(s) 948, 1338
BstUI CGCG 1 cut(s) 1573
BstV1I GCAGC 6 cut(s) 79, 657, 721, 1436, 2071, 2074
BstV2I GAAGAC 4 cut(s) 635, 702, 1925, 2182
BstX2I RGATCY 3 cut(s) 670, 1250, 1904
BstYI RGATCY 3 cut(s) 670, 1250, 1904
BsuRI GGCC 6 cut(s) 7, 136, 255, 1009, 1323, 1612
BtsCI GGATG 5 cut(s) 219, 392, 1141, 2125, 2154
BtsI GCAGTG 6 cut(s) 646, 1407, 1452, 1785, 2216, 2319
BtsIMutI CAGTG 9 cut(s) 646, 1079, 1093, 1188, 1407, 1452, 1785, 2216, 2319
Cac8I GCNNGC 5 cut(s) 9, 408, 679, 782, 1767
CciI TCATGA 1 cut(s) 1990
CfoI GCGC 1 cut(s) 2244
Cfr10I RCCGGY 2 cut(s) 7, 548
Cfr13I GGNCC 8 cut(s) 42, 195, 253, 267, 390, 546, 774, 1647
CpoI CGGWCCG 1 cut(s) 546
Csp6I GTAC 4 cut(s) 598, 763, 866, 1873
CspAI ACCGGT 1 cut(s) 548
CspI CGGWCCG 1 cut(s) 546
CviQI GTAC 4 cut(s) 598, 763, 866, 1873
DpnI GATC 9 cut(s) 73, 672, 1119, 1252, 1686, 1734, 1906, 1989, 2254
DpnII GATC 9 cut(s) 71, 670, 1117, 1250, 1684, 1732, 1904, 1987, 2252
DraI TTTAAA 1 cut(s) 375
DraIII CACNNNGTG 1 cut(s) 1211
DrdI GACNNNNNNGTC 1 cut(s) 2271
DseDI GACNNNNNNGTC 1 cut(s) 2271
EaeI YGGCCR 1 cut(s) 1007
Eam1104I CTCTTC 6 cut(s) 116, 530, 614, 1086, 1531, 2108
EarI CTCTTC 6 cut(s) 116, 530, 614, 1086, 1531, 2108
Eco130I CCWWGG 1 cut(s) 1296
Eco24I GRGCYC 5 cut(s) 238, 498, 683, 822, 1619
Eco31I GGTCTC 1 cut(s) 1474
Eco47I GGWCC 7 cut(s) 42, 195, 267, 390, 546, 774, 1647
Eco57I CTGAAG 3 cut(s) 705, 1965, 1982
Eco88I CYCGRG 1 cut(s) 237
EcoNI CCTNNNNNAGG 1 cut(s) 1806
EcoRII CCWGG 6 cut(s) 530, 844, 860, 1807, 1825, 2193
EcoT14I CCWWGG 1 cut(s) 1296
EcoT22I ATGCAT 1 cut(s) 990
EcoT38I GRGCYC 5 cut(s) 238, 498, 683, 822, 1619
ErhI CCWWGG 1 cut(s) 1296
Esp3I CGTCTC 1 cut(s) 76
FaqI GGGAC 3 cut(s) 67, 1633, 1808
FauI CCCGC 1 cut(s) 403
FauNDI CATATG 1 cut(s) 2062
FbaI TGATCA 1 cut(s) 1117
FblI GTMKAC 1 cut(s) 62
Fnu4HI GCNGC 9 cut(s) 93, 256, 259, 399, 646, 735, 1450, 2085, 2088
FokI GGATG 5 cut(s) 226, 399, 1128, 2132, 2161
FriOI GRGCYC 5 cut(s) 238, 498, 683, 822, 1619
Fsp4HI GCNGC 9 cut(s) 93, 256, 259, 399, 646, 735, 1450, 2085, 2088
FspI TGCGCA 1 cut(s) 2243
GlaI GCGC 1 cut(s) 2243
GluI GCNGC 9 cut(s) 93, 256, 259, 399, 646, 735, 1450, 2085, 2088
GsuI CTGGAG 3 cut(s) 311, 909, 1554
HaeIII GGCC 6 cut(s) 7, 136, 255, 1009, 1323, 1612
HapII CCGG 6 cut(s) 8, 403, 549, 1145, 1613, 1682
HhaI GCGC 1 cut(s) 2244
Hin1I GRCGYC 1 cut(s) 11
Hin6I GCGC 1 cut(s) 2242
HinP1I GCGC 1 cut(s) 2242
HincII GTYRAC 1 cut(s) 63
HindII GTYRAC 1 cut(s) 63
HindIII AAGCTT 1 cut(s) 1355
HpaII CCGG 6 cut(s) 8, 403, 549, 1145, 1613, 1682
Hpy166II GTNNAC 7 cut(s) 63, 229, 763, 940, 1205, 1978, 2057
Hpy8I GTNNAC 7 cut(s) 63, 229, 763, 940, 1205, 1978, 2057
Hpy99I CGWCG 2 cut(s) 16, 90
HpyAV CCTTC 6 cut(s) 160, 214, 341, 1272, 1879, 2035
HpyCH4III ACNGT 7 cut(s) 1088, 1137, 1183, 1625, 1778, 1847, 2054
HpyCH4IV ACGT 2 cut(s) 868, 1974
HpyF10VI GCNNNNNNNGC 5 cut(s) 13, 407, 645, 1813, 2239
HpySE526I ACGT 2 cut(s) 868, 1974
Hsp92I GRCGYC 1 cut(s) 11
HspAI GCGC 1 cut(s) 2242
Kpn2I TCCGGA 1 cut(s) 1681
KroI GCCGGC 1 cut(s) 7
KroNI GCCGGC 1 cut(s) 9
Ksp22I TGATCA 1 cut(s) 1117
Kzo9I GATC 9 cut(s) 71, 670, 1117, 1250, 1684, 1732, 1904, 1987, 2252
LguI GCTCTTC 1 cut(s) 116
LmnI GCTCC 6 cut(s) 233, 656, 817, 909, 1292, 1711
Lsp1109I GCAGC 6 cut(s) 79, 657, 721, 1436, 2071, 2074
LweI GCATC 4 cut(s) 352, 1150, 2020, 2209
MaeII ACGT 2 cut(s) 868, 1974
MaeIII GTNAC 3 cut(s) 551, 1504, 2371
MalI GATC 9 cut(s) 73, 672, 1119, 1252, 1686, 1734, 1906, 1989, 2254
MboI GATC 9 cut(s) 71, 670, 1117, 1250, 1684, 1732, 1904, 1987, 2252
MfeI CAATTG 2 cut(s) 366, 785
MflI RGATCY 3 cut(s) 670, 1250, 1904
MhlI GDGCHC 6 cut(s) 128, 238, 498, 683, 822, 1619
MmeI TCCRAC 2 cut(s) 648, 1480
Mph1103I ATGCAT 1 cut(s) 990
MroI TCCGGA 1 cut(s) 1681
MroNI GCCGGC 1 cut(s) 7
MroXI GAANNNNTTC 2 cut(s) 690, 1261
MseI TTAA 7 cut(s) 374, 852, 1068, 1199, 1310, 1568, 2021
MslI CAYNNNNRTG 6 cut(s) 926, 971, 1047, 1802, 1880, 1995
MspI CCGG 6 cut(s) 8, 403, 549, 1145, 1613, 1682
MspR9I CCNGG 8 cut(s) 403, 532, 846, 862, 1614, 1809, 1827, 2195
MunI CAATTG 2 cut(s) 366, 785
Mva1269I GAATGC 1 cut(s) 1417
MvaI CCWGG 6 cut(s) 532, 846, 862, 1809, 1827, 2195
MvnI CGCG 1 cut(s) 1573
MwoI GCNNNNNNNGC 5 cut(s) 13, 407, 645, 1813, 2239
NaeI GCCGGC 1 cut(s) 9
NciI CCSGG 2 cut(s) 403, 1614
NdeI CATATG 1 cut(s) 2062
NdeII GATC 9 cut(s) 71, 670, 1117, 1250, 1684, 1732, 1904, 1987, 2252
NgoMIV GCCGGC 1 cut(s) 7
NheI GCTAGC 1 cut(s) 406
NlaIV GGNNCC 5 cut(s) 43, 235, 819, 1294, 1649
NmeAIII GCCGAG 2 cut(s) 162, 718
NmuCI GTSAC 2 cut(s) 551, 2371
NsbI TGCGCA 1 cut(s) 2243
NsiI ATGCAT 1 cut(s) 990
NspI RCATGY 4 cut(s) 769, 1046, 1449, 2000
NspV TTCGAA 1 cut(s) 1409
PagI TCATGA 1 cut(s) 1990
PciI ACATGT 2 cut(s) 765, 1996
PciSI GCTCTTC 1 cut(s) 116
PcsI WCGNNNNNNNCGW 1 cut(s) 134
PctI GAATGC 1 cut(s) 1417
PdiI GCCGGC 1 cut(s) 9
PdmI GAANNNNTTC 2 cut(s) 690, 1261
PfeI GAWTC 6 cut(s) 272, 356, 571, 1348, 1370, 1439
PflFI GACNNNGTC 1 cut(s) 58
PinAI ACCGGT 1 cut(s) 548
PkrI GCNGC 9 cut(s) 94, 257, 260, 400, 647, 736, 1451, 2086, 2089
PscI ACATGT 2 cut(s) 765, 1996
PshBI ATTAAT 2 cut(s) 852, 2021
Psp6I CCWGG 6 cut(s) 530, 844, 860, 1807, 1825, 2193
PspGI CCWGG 6 cut(s) 530, 844, 860, 1807, 1825, 2193
PspN4I GGNNCC 5 cut(s) 43, 235, 819, 1294, 1649
PspPI GGNCC 8 cut(s) 42, 195, 253, 267, 390, 546, 774, 1647
PsrI GAACNNNNNNTAC 2 cut(s) 497, 529
PstI CTGCAG 1 cut(s) 952
PsuI RGATCY 3 cut(s) 670, 1250, 1904
PsyI GACNNNGTC 1 cut(s) 58
RsaI GTAC 4 cut(s) 599, 764, 867, 1874
RsaNI GTAC 4 cut(s) 598, 763, 866, 1873
RseI CAYNNNNRTG 6 cut(s) 926, 971, 1047, 1802, 1880, 1995
Rsr2I CGGWCCG 1 cut(s) 546
RsrII CGGWCCG 1 cut(s) 546
SalI GTCGAC 1 cut(s) 61
SapI GCTCTTC 1 cut(s) 116
SaqAI TTAA 7 cut(s) 374, 852, 1068, 1199, 1310, 1568, 2021
SatI GCNGC 9 cut(s) 93, 256, 259, 399, 646, 735, 1450, 2085, 2088
Sau3AI GATC 9 cut(s) 71, 670, 1117, 1250, 1684, 1732, 1904, 1987, 2252
Sau96I GGNCC 8 cut(s) 42, 195, 253, 267, 390, 546, 774, 1647
ScrFI CCNGG 8 cut(s) 403, 532, 846, 862, 1614, 1809, 1827, 2195
SduI GDGCHC 6 cut(s) 128, 238, 498, 683, 822, 1619
SfaNI GCATC 4 cut(s) 352, 1150, 2020, 2209
SfcI CTRYAG 2 cut(s) 948, 1338
SfuI TTCGAA 1 cut(s) 1409
SinI GGWCC 7 cut(s) 42, 195, 267, 390, 546, 774, 1647
SmiMI CAYNNNNRTG 6 cut(s) 926, 971, 1047, 1802, 1880, 1995
SmlI CTYRAG 2 cut(s) 458, 497
SmoI CTYRAG 2 cut(s) 458, 497
SsiI CCGC 5 cut(s) 256, 259, 399, 410, 1415
StyD4I CCNGG 8 cut(s) 401, 530, 844, 860, 1612, 1807, 1825, 2193
StyI CCWWGG 1 cut(s) 1296
TaaI ACNGT 7 cut(s) 1088, 1137, 1183, 1625, 1778, 1847, 2054
TaiI ACGT 2 cut(s) 871, 1977
TaqII GACCGA 1 cut(s) 433
TatI WGTACW 1 cut(s) 762
TauI GCSGC 3 cut(s) 258, 261, 401
TfiI GAWTC 6 cut(s) 272, 356, 571, 1348, 1370, 1439
Tru1I TTAA 7 cut(s) 374, 852, 1068, 1199, 1310, 1568, 2021
Tru9I TTAA 7 cut(s) 374, 852, 1068, 1199, 1310, 1568, 2021
TscAI CASTG 9 cut(s) 646, 1079, 1093, 1188, 1407, 1459, 1792, 2223, 2326
TseFI GTSAC 2 cut(s) 551, 2371
TseI GCWGC 6 cut(s) 92, 645, 734, 1449, 2084, 2087
Tsp45I GTSAC 2 cut(s) 551, 2371
TspDTI ATGAA 6 cut(s) 702, 910, 1224, 1744, 2007, 2165
TspGWI ACGGA 4 cut(s) 246, 559, 1294, 1842
TspRI CASTG 9 cut(s) 646, 1079, 1093, 1188, 1407, 1459, 1792, 2223, 2326
Tth111I GACNNNGTC 1 cut(s) 58
VpaK11BI GGWCC 7 cut(s) 42, 195, 267, 390, 546, 774, 1647
VspI ATTAAT 2 cut(s) 852, 2021
XagI CCTNNNNNAGG 1 cut(s) 1806
XapI RAATTY 2 cut(s) 157, 2012
XbaI TCTAGA 2 cut(s) 1253, 1901
XceI RCATGY 4 cut(s) 769, 1046, 1449, 2000
XmiI GTMKAC 1 cut(s) 62
XmnI GAANNNNTTC 2 cut(s) 690, 1261
Zsp2I ATGCAT 1 cut(s) 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.