Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27180 |
| fragaria_vesca | FvH4_6g53250 |
| malus_domestica | MD09G1012500.v1.1 |
| prunus_persica | Prupe.3G304500_v2.0.a1 |
| pyrus_communis | pycom02g22280 pycom111g01050 pycom16g10840 |
| rosa_chinensis | RchiOBHm_Chr2g0175381 |
| rosa_laevigata | RLG00000022323 |
| rosa_multiflora | Rmu_sc0003512.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00077420 |
| rosa_rugosa | Rorug02G0583500 Rorug02G0583600 |
| rosa_samantha | Rh2AG663700 Rh2BG674500 Rh2CG637700 Rh2DG688500 |
| rosa_wichuraiana | Rw2G054390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 74 |
| AfaI | GTAC | 1 cut(s) | 109 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 133, 269, 270 |
| AgsI | TTSAA | 3 cut(s) | 91, 121, 166 |
| AluBI | AGCT | 3 cut(s) | 39, 323, 356 |
| AluI | AGCT | 3 cut(s) | 39, 323, 356 |
| Alw21I | GWGCWC | 1 cut(s) | 101 |
| Alw26I | GTCTC | 2 cut(s) | 143, 184 |
| ApeKI | GCWGC | 2 cut(s) | 345, 356 |
| AspLEI | GCGC | 1 cut(s) | 71 |
| AsuHPI | GGTGA | 1 cut(s) | 243 |
| BanII | GRGCYC | 1 cut(s) | 35 |
| Bbv12I | GWGCWC | 1 cut(s) | 101 |
| BbvI | GCAGC | 2 cut(s) | 332, 343 |
| BccI | CCATC | 2 cut(s) | 64, 210 |
| BcoDI | GTCTC | 2 cut(s) | 143, 184 |
| BfaI | CTAG | 2 cut(s) | 36, 102 |
| BfuAI | ACCTGC | 1 cut(s) | 74 |
| BisI | GCNGC | 2 cut(s) | 346, 357 |
| BlsI | GCNGC | 2 cut(s) | 347, 358 |
| BsaWI | WCCGGW | 2 cut(s) | 133, 253 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 133, 269, 270 |
| Bse1I | ACTGG | 1 cut(s) | 115 |
| BseGI | GGATG | 2 cut(s) | 221, 329 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 133, 269, 270 |
| BseMII | CTCAG | 2 cut(s) | 20, 195 |
| BseNI | ACTGG | 1 cut(s) | 115 |
| BseRI | GAGGAG | 1 cut(s) | 39 |
| BseXI | GCAGC | 2 cut(s) | 332, 343 |
| BsgI | GTGCAG | 1 cut(s) | 68 |
| BsiHKAI | GWGCWC | 1 cut(s) | 101 |
| BsiSI | CCGG | 2 cut(s) | 134, 254 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 133, 269, 270 |
| BsmAI | GTCTC | 2 cut(s) | 143, 184 |
| Bsp1286I | GDGCHC | 2 cut(s) | 35, 101 |
| Bsp1407I | TGTACA | 1 cut(s) | 107 |
| BspCNI | CTCAG | 2 cut(s) | 21, 194 |
| BspMI | ACCTGC | 1 cut(s) | 74 |
| BsrGI | TGTACA | 1 cut(s) | 107 |
| BsrI | ACTGG | 1 cut(s) | 115 |
| Bst4CI | ACNGT | 3 cut(s) | 131, 172, 200 |
| BstAUI | TGTACA | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 1 cut(s) | 83 |
| BstDEI | CTNAG | 2 cut(s) | 29, 181 |
| BstF5I | GGATG | 2 cut(s) | 221, 329 |
| BstHHI | GCGC | 1 cut(s) | 71 |
| BstMAI | GTCTC | 2 cut(s) | 143, 184 |
| BstV1I | GCAGC | 2 cut(s) | 332, 343 |
| BtgZI | GCGATG | 1 cut(s) | 42 |
| BtsCI | GGATG | 2 cut(s) | 221, 329 |
| BtsI | GCAGTG | 2 cut(s) | 76, 227 |
| BtsIMutI | CAGTG | 3 cut(s) | 26, 76, 227 |
| BveI | ACCTGC | 1 cut(s) | 74 |
| Cac8I | GCNNGC | 1 cut(s) | 83 |
| CfoI | GCGC | 1 cut(s) | 71 |
| Csp6I | GTAC | 1 cut(s) | 108 |
| CviAII | CATG | 1 cut(s) | 245 |
| CviJI | RGCY | 6 cut(s) | 33, 39, 249, 274, 323, 356 |
| CviKI_1 | RGCY | 6 cut(s) | 33, 39, 249, 274, 323, 356 |
| CviQI | GTAC | 1 cut(s) | 108 |
| DdeI | CTNAG | 2 cut(s) | 29, 181 |
| Eco24I | GRGCYC | 1 cut(s) | 35 |
| EcoT38I | GRGCYC | 1 cut(s) | 35 |
| FaeI | CATG | 1 cut(s) | 248 |
| FaiI | YATR | 3 cut(s) | 246, 294, 339 |
| FatI | CATG | 1 cut(s) | 244 |
| Fnu4HI | GCNGC | 2 cut(s) | 346, 357 |
| FokI | GGATG | 2 cut(s) | 228, 316 |
| FriOI | GRGCYC | 1 cut(s) | 35 |
| Fsp4HI | GCNGC | 2 cut(s) | 346, 357 |
| FspBI | CTAG | 2 cut(s) | 36, 102 |
| GlaI | GCGC | 1 cut(s) | 70 |
| GluI | GCNGC | 2 cut(s) | 346, 357 |
| HapII | CCGG | 2 cut(s) | 134, 254 |
| HhaI | GCGC | 1 cut(s) | 71 |
| Hin1II | CATG | 1 cut(s) | 248 |
| Hin6I | GCGC | 1 cut(s) | 69 |
| HinP1I | GCGC | 1 cut(s) | 69 |
| HinfI | GANTC | 1 cut(s) | 177 |
| HpaII | CCGG | 2 cut(s) | 134, 254 |
| HphI | GGTGA | 1 cut(s) | 243 |
| Hpy166II | GTNNAC | 2 cut(s) | 108, 110 |
| Hpy188I | TCNGA | 1 cut(s) | 184 |
| Hpy188III | TCNNGA | 2 cut(s) | 166, 281 |
| Hpy8I | GTNNAC | 2 cut(s) | 108, 110 |
| Hpy99I | CGWCG | 1 cut(s) | 146 |
| HpyAV | CCTTC | 1 cut(s) | 27 |
| HpyCH4III | ACNGT | 3 cut(s) | 131, 172, 200 |
| HpyCH4V | TGCA | 4 cut(s) | 85, 204, 230, 318 |
| HpyF3I | CTNAG | 2 cut(s) | 29, 181 |
| Hsp92II | CATG | 1 cut(s) | 248 |
| HspAI | GCGC | 1 cut(s) | 69 |
| LmnI | GCTCC | 1 cut(s) | 353 |
| LpnPI | CCDG | 7 cut(s) | 79, 95, 128, 147, 266, 267, 278 |
| Lsp1109I | GCAGC | 2 cut(s) | 332, 343 |
| MaeI | CTAG | 2 cut(s) | 36, 102 |
| MboII | GAAGA | 1 cut(s) | 154 |
| MhlI | GDGCHC | 2 cut(s) | 35, 101 |
| MluCI | AATT | 1 cut(s) | 206 |
| MlyI | GAGTC | 1 cut(s) | 186 |
| MmeI | TCCRAC | 1 cut(s) | 154 |
| MnlI | CCTC | 5 cut(s) | 57, 60, 83, 277, 321 |
| MseI | TTAA | 1 cut(s) | 361 |
| MspI | CCGG | 2 cut(s) | 134, 254 |
| NlaIII | CATG | 1 cut(s) | 248 |
| PkrI | GCNGC | 2 cut(s) | 347, 358 |
| PleI | GAGTC | 1 cut(s) | 185 |
| PpsI | GAGTC | 1 cut(s) | 185 |
| RsaI | GTAC | 1 cut(s) | 109 |
| RsaNI | GTAC | 1 cut(s) | 108 |
| SaqAI | TTAA | 1 cut(s) | 361 |
| SatI | GCNGC | 2 cut(s) | 346, 357 |
| SchI | GAGTC | 1 cut(s) | 186 |
| SduI | GDGCHC | 2 cut(s) | 35, 101 |
| SetI | ASST | 6 cut(s) | 19, 41, 68, 107, 325, 358 |
| Sse9I | AATT | 1 cut(s) | 206 |
| SspMI | CTAG | 2 cut(s) | 36, 102 |
| TaaI | ACNGT | 3 cut(s) | 131, 172, 200 |
| TaqI | TCGA | 1 cut(s) | 144 |
| TasI | AATT | 1 cut(s) | 206 |
| TatI | WGTACW | 1 cut(s) | 107 |
| Tru1I | TTAA | 1 cut(s) | 361 |
| Tru9I | TTAA | 1 cut(s) | 361 |
| TscAI | CASTG | 3 cut(s) | 33, 83, 227 |
| TseI | GCWGC | 2 cut(s) | 345, 356 |
| TspDTI | ATGAA | 1 cut(s) | 233 |
| TspGWI | ACGGA | 1 cut(s) | 170 |
| TspRI | CASTG | 3 cut(s) | 33, 83, 227 |
| XspI | CTAG | 2 cut(s) | 36, 102 |