Rh2CG637700
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
80918737 .. 80926778
8042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG637700.1

Sequence Viewer

Length: 1521 bp
ATGCCTCTCTGCTTCCTCTCCCCCCGCCTTCCTCCTCCGCCACTCATCACCTGCCGCGTGTCCCAATCCTCACTCCGCACCCTACTTCCTTCTCCTTCTCCGTCACCGTCACCGCCACCGTCACCGCCGTCTGCCTCACTCTCACTAAGCCCTAACTCAACCCTACCGCCGTCGCTAACCTGCGCCCTCCACTGCCCACACTTCGAACTGTGCTCCGGCTGTACTCACGAGTTCAATCTCCACCGTCCGGCCATCGTCGACGAGGCTACCAAGTTCTTCAAGTCCCTCGGCCTCTCCGATTTCACATTCGACAGTTGCAAACTGTGGGGATGGCGGTGCCGTGCGAAATTGGCCGTTCGCGGCTCCTCGGAGCACCCTCTGATTGGGCTGTATCAGGAGGGCACTCATAATATAGTTGATATTCCTGACTGCAAAGCTCATCATCCGAATATCAATGCCGCGGTAGAGCTGCTTAAGAAAGGGATTACTGCGCTAAGGATTGAGCCATATGATGAAGATGAGGGGACTGGTGATTTGCGTTATGTGCAGATGGCCGTGACAACATACAGTACATCTCTTCCTGCTGCCGAAAGATATAGAAATGGTAAAGTGCAGGTATCTTTAGTATGGAATTCGAGAAATGAAACCTCCCCAAATTCAGAGAAACTGCAAGCCTTGGCCAATTTTATATGGAGGAATGGTGGGCCAAGGAACAATGTCCATCTGATTCACTCTGTGTGGGCTAACTTTCAGACATCAAGTAACAATATAATCTTTGGGAATAGATGGAGACATCTTTTAGGAGAAAGAGACTTTTGGGAGCATGTCGGAGGAATTGATATTTCCTTGGCTCCATCCAGTTTTGGCCAAGCAAACACACGGGCATTTGATACCCTGCTCCGGAAGCTACAAAAGTATGTCCCTCTTGGAGCATCTGTTGCTGATTTGTATGCAGGAGTAGGTGTTATCGGATTATCATTGGCTGCTACAAGAAAATGCAGGTCTGTGAGATGCATTGAGATTAACAAAGAATCAAAGCTATCCTTTGAGAAGACGGTTGACCGCCTGCCAAACATAGTAGATAGCAGCATCAGCTGGCATCATGCAGACACTTCTAAGGAACCTCTTTCCTGGATCATGGGATCAGATGTACTTGTTGTTGATCCTCCTAGAAAGGGTCTGGATGCATCTCTTGTTGATGCATTGCGGAGTATATCTTCTATAAAGGATAAAGCTAGGTCATCATCTGAGAGTTCAAGCTCAAAGGAGAAGGATGAGAAGAGGCCATGGATGCTACGTGCAAGAGAAGATTCAATTCAGATTGGAAGCAAAATGACTTCAGAGGATAGCAAAATGTTGCCTAAAACCCTCATTTATATAAGTTGTGGATGGGAAAGCTTCAAAGAGGATTGTGAAGACTTGTTGTCAAGTAAGGGATGGCGCTTGGAAAAAGCCCATGGCTTTAATTTTTTCCCTGGCACACAGAGGTTCTTCTTTTACCCCCTCTCGTCCAATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

56.34

Weight (kDa)

8.69

Isoelectric Point (pI)

54.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013116)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 59
Acc36I ACCTGC 4 cut(s) 59, 188, 604, 990
AccB1I GGYRCC 1 cut(s) 336
AccI GTMKAC 1 cut(s) 258
AccII CGCG 3 cut(s) 57, 360, 461
AccIII TCCGGA 1 cut(s) 900
AclWI GGATC 3 cut(s) 1142, 1150, 1157
AcoI YGGCCR 5 cut(s) 249, 351, 552, 678, 865
AcsI RAATTY 2 cut(s) 631, 655
AcuI CTGAAG 1 cut(s) 1323
AdeI CACNNNGTG 1 cut(s) 736
AfaI GTAC 3 cut(s) 223, 571, 1152
AfiI CCNNNNNNNGG 4 cut(s) 247, 383, 900, 1175
AflII CTTAAG 1 cut(s) 473
AgsI TTSAA 2 cut(s) 235, 280
AhdI GACNNNNNGTC 1 cut(s) 1423
AjnI CCWGG 2 cut(s) 1130, 1474
AluBI AGCT 8 cut(s) 437, 469, 907, 1039, 1095, 1235, 1260, 1398
AluI AGCT 8 cut(s) 437, 469, 907, 1039, 1095, 1235, 1260, 1398
Alw21I GWGCWC 2 cut(s) 215, 375
Alw26I GTCTC 2 cut(s) 784, 804
AlwI GGATC 3 cut(s) 1142, 1150, 1157
Aor13HI TCCGGA 1 cut(s) 900
AoxI GGCC 8 cut(s) 249, 289, 351, 552, 678, 704, 865, 1283
ApeKI GCWGC 4 cut(s) 469, 584, 983, 1086
ApoI RAATTY 2 cut(s) 631, 655
ArsI GACNNNNNNTTYG 2 cut(s) 517, 549
AspLEI GCGC 3 cut(s) 185, 493, 1443
AspS9I GGNCC 1 cut(s) 704
AsuHPI GGTGA 5 cut(s) 40, 96, 102, 114, 542
AsuII TTCGAA 1 cut(s) 204
BaeGI GKGCMC 1 cut(s) 404
BalI TGGCCA 2 cut(s) 680, 867
BanI GGYRCC 1 cut(s) 336
BauI CACGAG 1 cut(s) 227
BbsI GAAGAC 2 cut(s) 1058, 1422
Bbv12I GWGCWC 2 cut(s) 215, 375
BbvI GCAGC 4 cut(s) 456, 571, 970, 1098
BccI CCATC 8 cut(s) 260, 324, 544, 729, 780, 862, 1383, 1431
BceAI ACGGC 5 cut(s) 112, 154, 324, 338, 539
BciT130I CCWGG 2 cut(s) 1132, 1476
BcoDI GTCTC 2 cut(s) 784, 804
BfaI CTAG 2 cut(s) 1170, 1236
BfoI RGCGCY 1 cut(s) 1444
BfrI CTTAAG 1 cut(s) 473
BfuAI ACCTGC 4 cut(s) 59, 188, 604, 990
BisI GCNGC 7 cut(s) 55, 361, 459, 470, 585, 984, 1087
BlsI GCNGC 7 cut(s) 56, 362, 460, 471, 586, 985, 1088
Bme1390I CCNGG 2 cut(s) 1132, 1476
BmeRI GACNNNNNGTC 1 cut(s) 1423
BmgT120I GGNCC 1 cut(s) 704
BmiI GGNNCC 4 cut(s) 338, 364, 852, 1122
BmrFI CCNGG 2 cut(s) 1132, 1476
BmsI GCATC 8 cut(s) 941, 1001, 1098, 1108, 1174, 1189, 1196, 1281
BpiI GAAGAC 2 cut(s) 1058, 1422
Bpu10I CCTNAGC 1 cut(s) 494
Bpu14I TTCGAA 1 cut(s) 204
BsaAI YACGTR 1 cut(s) 1298
BsaJI CCNNGG 9 cut(s) 286, 366, 459, 675, 707, 846, 1286, 1456, 1474
BsaWI WCCGGW 1 cut(s) 900
BsaXI ACNNNNNCTCC 6 cut(s) 685, 715, 921, 948, 951, 978
Bsc4I CCNNNNNNNGG 4 cut(s) 247, 383, 900, 1175
Bse1I ACTGG 2 cut(s) 532, 858
Bse3DI GCAATG 1 cut(s) 1202
BseAI TCCGGA 1 cut(s) 900
BseBI CCWGG 2 cut(s) 1132, 1476
BseDI CCNNGG 9 cut(s) 286, 366, 459, 675, 707, 846, 1286, 1456, 1474
BseGI GGATG 8 cut(s) 335, 442, 854, 1189, 1279, 1296, 1394, 1442
BseLI CCNNNNNNNGG 4 cut(s) 247, 383, 900, 1175
BseMI GCAATG 1 cut(s) 1202
BseMII CTCAG 1 cut(s) 1239
BseNI ACTGG 2 cut(s) 532, 858
BseRI GAGGAG 2 cut(s) 24, 355
BseSI GKGCMC 1 cut(s) 404
BseXI GCAGC 4 cut(s) 456, 571, 970, 1098
BsgI GTGCAG 2 cut(s) 566, 632
Bsh1236I CGCG 3 cut(s) 57, 360, 461
BshFI GGCC 8 cut(s) 251, 291, 353, 554, 680, 706, 867, 1285
BshNI GGYRCC 1 cut(s) 336
BsiHKAI GWGCWC 2 cut(s) 215, 375
BsiSI CCGG 3 cut(s) 216, 248, 901
BslFI GGGAC 4 cut(s) 46, 268, 538, 905
BslI CCNNNNNNNGG 4 cut(s) 247, 383, 900, 1175
BsmAI GTCTC 2 cut(s) 784, 804
BsmFI GGGAC 4 cut(s) 46, 268, 538, 905
BsnI GGCC 8 cut(s) 251, 291, 353, 554, 680, 706, 867, 1285
Bsp119I TTCGAA 1 cut(s) 204
Bsp1286I GDGCHC 3 cut(s) 215, 375, 404
Bsp13I TCCGGA 1 cut(s) 900
Bsp143I GATC 3 cut(s) 1134, 1142, 1162
Bsp19I CCATGG 2 cut(s) 1286, 1456
BspANI GGCC 8 cut(s) 251, 291, 353, 554, 680, 706, 867, 1285
BspCNI CTCAG 1 cut(s) 1240
BspEI TCCGGA 1 cut(s) 900
BspFNI CGCG 3 cut(s) 57, 360, 461
BspLI GGNNCC 4 cut(s) 338, 364, 852, 1122
BspMI ACCTGC 4 cut(s) 59, 188, 604, 990
BspPI GGATC 3 cut(s) 1142, 1150, 1157
BspT104I TTCGAA 1 cut(s) 204
BspT107I GGYRCC 1 cut(s) 336
BspTI CTTAAG 1 cut(s) 473
BsrDI GCAATG 1 cut(s) 1202
BsrI ACTGG 2 cut(s) 532, 858
BssECI CCNNGG 9 cut(s) 286, 366, 459, 675, 707, 846, 1286, 1456, 1474
BssMI GATC 3 cut(s) 1134, 1142, 1162
BssSI CACGAG 1 cut(s) 227
BssT1I CCWWGG 5 cut(s) 675, 707, 846, 1286, 1456
Bst2BI CACGAG 1 cut(s) 227
Bst2UI CCWGG 2 cut(s) 1132, 1476
Bst4CI ACNGT 8 cut(s) 108, 120, 210, 245, 314, 324, 569, 1057
Bst6I CTCTTC 2 cut(s) 582, 1274
BstAFI CTTAAG 1 cut(s) 473
BstAPI GCANNNNNTGC 1 cut(s) 938
BstBAI YACGTR 1 cut(s) 1298
BstBI TTCGAA 1 cut(s) 204
BstC8I GCNNGC 3 cut(s) 672, 1067, 1097
BstDEI CTNAG 4 cut(s) 146, 494, 1116, 1248
BstDSI CCRYGG 3 cut(s) 459, 1286, 1456
BstF5I GGATG 8 cut(s) 335, 442, 854, 1189, 1279, 1296, 1394, 1442
BstFNI CGCG 3 cut(s) 57, 360, 461
BstH2I RGCGCY 1 cut(s) 1444
BstHHI GCGC 3 cut(s) 185, 493, 1443
BstKTI GATC 3 cut(s) 1137, 1145, 1165
BstMAI GTCTC 2 cut(s) 784, 804
BstMBI GATC 3 cut(s) 1134, 1142, 1162
BstMWI GCNNNNNNNGC 6 cut(s) 350, 544, 904, 938, 1092, 1291
BstNI CCWGG 2 cut(s) 1132, 1476
BstNSI RCATGY 1 cut(s) 827
BstSCI CCNGG 2 cut(s) 1130, 1474
BstSLI GKGCMC 1 cut(s) 404
BstUI CGCG 3 cut(s) 57, 360, 461
BstV1I GCAGC 4 cut(s) 456, 571, 970, 1098
BstV2I GAAGAC 2 cut(s) 1058, 1422
BsuRI GGCC 8 cut(s) 251, 291, 353, 554, 680, 706, 867, 1285
BtgI CCRYGG 3 cut(s) 459, 1286, 1456
BtsCI GGATG 8 cut(s) 335, 442, 854, 1189, 1279, 1296, 1394, 1442
BtsI GCAGTG 1 cut(s) 190
BtsIMutI CAGTG 1 cut(s) 190
BveI ACCTGC 4 cut(s) 59, 188, 604, 990
Cac8I GCNNGC 3 cut(s) 672, 1067, 1097
CfoI GCGC 3 cut(s) 185, 493, 1443
Cfr13I GGNCC 1 cut(s) 704
Cfr42I CCGCGG 1 cut(s) 462
Csp6I GTAC 3 cut(s) 222, 570, 1151
CviAII CATG 5 cut(s) 824, 1103, 1138, 1287, 1457
CviQI GTAC 3 cut(s) 222, 570, 1151
DdeI CTNAG 4 cut(s) 146, 494, 1116, 1248
DpnI GATC 3 cut(s) 1136, 1144, 1164
DpnII GATC 3 cut(s) 1134, 1142, 1162
DraIII CACNNNGTG 1 cut(s) 736
DriI GACNNNNNGTC 1 cut(s) 1423
EaeI YGGCCR 5 cut(s) 249, 351, 552, 678, 865
Eam1104I CTCTTC 2 cut(s) 582, 1274
Eam1105I GACNNNNNGTC 1 cut(s) 1423
EarI CTCTTC 2 cut(s) 582, 1274
EciI GGCGGA 1 cut(s) 27
Eco130I CCWWGG 5 cut(s) 675, 707, 846, 1286, 1456
Eco57I CTGAAG 1 cut(s) 1323
EcoRI GAATTC 1 cut(s) 631
EcoRII CCWGG 2 cut(s) 1130, 1474
EcoT14I CCWWGG 5 cut(s) 675, 707, 846, 1286, 1456
EcoT22I ATGCAT 3 cut(s) 1016, 1189, 1204
ErhI CCWWGG 5 cut(s) 675, 707, 846, 1286, 1456
FaeI CATG 5 cut(s) 827, 1106, 1141, 1290, 1460
FalI AAGNNNNNCTT 2 cut(s) 1028, 1060
FaqI GGGAC 4 cut(s) 46, 268, 538, 905
FatI CATG 5 cut(s) 823, 1102, 1137, 1286, 1456
FauI CCCGC 1 cut(s) 32
FauNDI CATATG 1 cut(s) 508
FblI GTMKAC 1 cut(s) 258
Fnu4HI GCNGC 7 cut(s) 55, 361, 459, 470, 585, 984, 1087
FokI GGATG 8 cut(s) 342, 429, 841, 1196, 1286, 1303, 1401, 1449
Fsp4HI GCNGC 7 cut(s) 55, 361, 459, 470, 585, 984, 1087
FspBI CTAG 2 cut(s) 1170, 1236
GlaI GCGC 3 cut(s) 184, 492, 1442
GluI GCNGC 7 cut(s) 55, 361, 459, 470, 585, 984, 1087
HaeII RGCGCY 1 cut(s) 1444
HaeIII GGCC 8 cut(s) 251, 291, 353, 554, 680, 706, 867, 1285
HapII CCGG 3 cut(s) 216, 248, 901
HhaI GCGC 3 cut(s) 185, 493, 1443
Hin1II CATG 5 cut(s) 827, 1106, 1141, 1290, 1460
Hin6I GCGC 3 cut(s) 183, 491, 1441
HinP1I GCGC 3 cut(s) 183, 491, 1441
HincII GTYRAC 2 cut(s) 259, 1060
HindII GTYRAC 2 cut(s) 259, 1060
HindIII AAGCTT 1 cut(s) 1396
HinfI GANTC 3 cut(s) 727, 1031, 1310
HpaII CCGG 3 cut(s) 216, 248, 901
HphI GGTGA 5 cut(s) 40, 96, 102, 114, 542
Hpy166II GTNNAC 2 cut(s) 259, 1060
Hpy188III TCNNGA 6 cut(s) 227, 395, 425, 636, 901, 1181
Hpy8I GTNNAC 2 cut(s) 259, 1060
Hpy99I CGWCG 3 cut(s) 175, 260, 263
HpyAV CCTTC 4 cut(s) 38, 99, 105, 1264
HpyCH4III ACNGT 8 cut(s) 108, 120, 210, 245, 314, 324, 569, 1057
HpyCH4IV ACGT 1 cut(s) 1297
HpyF10VI GCNNNNNNNGC 6 cut(s) 350, 544, 904, 938, 1092, 1291
HpyF3I CTNAG 4 cut(s) 146, 494, 1116, 1248
HpySE526I ACGT 1 cut(s) 1297
Hsp92II CATG 5 cut(s) 827, 1106, 1141, 1290, 1460
HspAI GCGC 3 cut(s) 183, 491, 1441
Kpn2I TCCGGA 1 cut(s) 900
KspI CCGCGG 1 cut(s) 462
Kzo9I GATC 3 cut(s) 1134, 1142, 1162
LmnI GCTCC 7 cut(s) 218, 368, 370, 820, 856, 903, 929
Lsp1109I GCAGC 4 cut(s) 456, 571, 970, 1098
LweI GCATC 8 cut(s) 941, 1001, 1098, 1108, 1174, 1189, 1196, 1281
MaeI CTAG 2 cut(s) 1170, 1236
MaeII ACGT 1 cut(s) 1297
MaeIII GTNAC 5 cut(s) 102, 108, 120, 556, 761
MalI GATC 3 cut(s) 1136, 1144, 1164
MboI GATC 3 cut(s) 1134, 1142, 1162
MboII GAAGA 9 cut(s) 268, 527, 569, 1063, 1209, 1291, 1319, 1427, 1483
MhlI GDGCHC 3 cut(s) 215, 375, 404
MlsI TGGCCA 2 cut(s) 680, 867
MluCI AATT 7 cut(s) 347, 631, 655, 682, 834, 1314, 1465
MluNI TGGCCA 2 cut(s) 680, 867
MlyI GAGTC 1 cut(s) 29
MmeI TCCRAC 1 cut(s) 808
Mox20I TGGCCA 2 cut(s) 680, 867
Mph1103I ATGCAT 3 cut(s) 1016, 1189, 1204
MroI TCCGGA 1 cut(s) 900
MscI TGGCCA 2 cut(s) 680, 867
MseI TTAA 3 cut(s) 474, 1023, 1464
Msp20I TGGCCA 2 cut(s) 680, 867
MspA1I CMGCKG 2 cut(s) 461, 1095
MspCI CTTAAG 1 cut(s) 473
MspI CCGG 3 cut(s) 216, 248, 901
MspR9I CCNGG 2 cut(s) 1132, 1476
MvaI CCWGG 2 cut(s) 1132, 1476
MvnI CGCG 3 cut(s) 57, 360, 461
MwoI GCNNNNNNNGC 6 cut(s) 350, 544, 904, 938, 1092, 1291
NcoI CCATGG 2 cut(s) 1286, 1456
NdeI CATATG 1 cut(s) 508
NdeII GATC 3 cut(s) 1134, 1142, 1162
NlaIII CATG 5 cut(s) 827, 1106, 1141, 1290, 1460
NlaIV GGNNCC 4 cut(s) 338, 364, 852, 1122
NmeAIII GCCGAG 1 cut(s) 267
NmuCI GTSAC 4 cut(s) 102, 108, 120, 556
NsiI ATGCAT 3 cut(s) 1016, 1189, 1204
NspI RCATGY 1 cut(s) 827
NspV TTCGAA 1 cut(s) 204
PaqCI CACCTGC 1 cut(s) 59
PcsI WCGNNNNNNNCGW 1 cut(s) 294
PfeI GAWTC 3 cut(s) 727, 1031, 1310
PfoI TCCNGGA 1 cut(s) 1130
PkrI GCNGC 7 cut(s) 56, 362, 460, 471, 586, 985, 1088
Ppu21I YACGTR 1 cut(s) 1298
Psp6I CCWGG 2 cut(s) 1130, 1474
PspGI CCWGG 2 cut(s) 1130, 1474
PspN4I GGNNCC 4 cut(s) 338, 364, 852, 1122
PspPI GGNCC 1 cut(s) 704
PvuII CAGCTG 1 cut(s) 1095
RsaI GTAC 3 cut(s) 223, 571, 1152
RsaNI GTAC 3 cut(s) 222, 570, 1151
SacII CCGCGG 1 cut(s) 462
SalI GTCGAC 1 cut(s) 257
SaqAI TTAA 3 cut(s) 474, 1023, 1464
SatI GCNGC 7 cut(s) 55, 361, 459, 470, 585, 984, 1087
Sau3AI GATC 3 cut(s) 1134, 1142, 1162
Sau96I GGNCC 1 cut(s) 704
ScrFI CCNGG 2 cut(s) 1132, 1476
SduI GDGCHC 3 cut(s) 215, 375, 404
SfaNI GCATC 8 cut(s) 941, 1001, 1098, 1108, 1174, 1189, 1196, 1281
Sfr303I CCGCGG 1 cut(s) 462
SfuI TTCGAA 1 cut(s) 204
SgrBI CCGCGG 1 cut(s) 462
SgrDI CGTCGACG 1 cut(s) 257
SmlI CTYRAG 1 cut(s) 473
SmoI CTYRAG 1 cut(s) 473
Sse9I AATT 7 cut(s) 347, 631, 655, 682, 834, 1314, 1465
SspMI CTAG 2 cut(s) 1170, 1236
StyD4I CCNGG 2 cut(s) 1130, 1474
StyI CCWWGG 5 cut(s) 675, 707, 846, 1286, 1456
TaaI ACNGT 8 cut(s) 108, 120, 210, 245, 314, 324, 569, 1057
TaiI ACGT 1 cut(s) 1300
TaqI TCGA 4 cut(s) 204, 258, 309, 635
TasI AATT 7 cut(s) 347, 631, 655, 682, 834, 1314, 1465
TatI WGTACW 3 cut(s) 221, 569, 1150
TauI GCSGC 3 cut(s) 57, 363, 461
TfiI GAWTC 3 cut(s) 727, 1031, 1310
Tru1I TTAA 3 cut(s) 474, 1023, 1464
Tru9I TTAA 3 cut(s) 474, 1023, 1464
TscAI CASTG 1 cut(s) 197
TseFI GTSAC 4 cut(s) 102, 108, 120, 556
TseI GCWGC 4 cut(s) 469, 584, 983, 1086
Tsp45I GTSAC 4 cut(s) 102, 108, 120, 556
TspDTI ATGAA 2 cut(s) 528, 657
TspGWI ACGGA 1 cut(s) 90
TspRI CASTG 1 cut(s) 197
Vha464I CTTAAG 1 cut(s) 473
XapI RAATTY 2 cut(s) 631, 655
XceI RCATGY 1 cut(s) 827
XmiI GTMKAC 1 cut(s) 258
XspI CTAG 2 cut(s) 1170, 1236
Zsp2I ATGCAT 3 cut(s) 1016, 1189, 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.