pycom02g25200

transport protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0010028
Physical Location & Seq
Reverse (-)
23228125 .. 23234541
6417 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1935 bp
ATGGGCCAAGCCCACTGCTTGAAGCATGATCGATCGGGGTCGCAAGAATTCGGGCTTGGGCTCATCGCTGGTGGACTTGTTGATGGCACTATTGATATCTGGAACCCACAAACTCTGATCCGTCCGGAGGCGGGTGTAAGTGCTTCAGTTGGGCATCTCACAAGACATAAAGGCCCTGTTCGTGGTCTTGAATTTAATGCAATTGCACCCAATTTACTTGCATCTGGGGCTGATGATGGTGAAATTTGCATTTGGGACTTGACCAATCCTGCAGAACCCTCTCACTTCCCACCTCTCAAGGGTAGTGGATCTGCTGCCCAGGGTGAGGTGTCATTTTTATCTTGGAATAGCAAGGTCCAACATATATTAGCATCCACTTCGTTAAATGGGACAACTGTGATTTGGGACCTGAAAAAGCAAAAGCCAGTAATAAGTTTTACAGATTCAGTTAGAAGACGGTGCTCTGTTTTGCAGTGGAATCCTGATATTGCCACTCAGCTAATTGTTTCTTCAGATGAAGATGGTTCACCTTCTCTTAGGCTGTGGGATATGCGTAATATAATGTCACCAGTTAAAGAGTTTGTTGGGCACACAAAAGGTGTAATTGCAATGTCTTGGTGTCCGAATGACAGCTCCTATCTGCTTACATGTGCCAAGGATAATCGAACTATTTGCTGGGACACAGTTTCTGCAGAGATTGTATGTGAATTGCCGGCAGGCACCAATTGGAATTTTGATGTGCATTGGTATCCAAAAGTACCTGGAGTGATATCGGCATCTTCATTTGATGGAAAAATTGGAATTTACAATATTGAGGGTTGCAGCAGATATGGAGTTGGGGAAAGTGATTTTGGTGCAGGACCTCTGAGAGCTCCGAAATGGTATAAGCGCCCAGTTGGGGCATCTTTTGGCTTTGGAGGCAAGATTGTGTCCTTTCAGCACACTTCTGCGGGTTCGGAGGTTTATGTACACAGCTTGGTTACTGAACACAGTTTGGTGAATCGCTCATCGGAATTTGAAGCTGCAATCCAAAATGGGGAAAGGCATTTACTTCGAGCCTTGTGTGAGAAGAAATCACAGGAGTCTGAATCTGAGGATGACCAGGAAACATGGGGCTTATTAAGGGTATTGTTTGAAGATGATGGGACTGCAAGGACGAAACTGATCACTCATCTTGGTTTCAGTATGCCTGAGGAAACAAAAGAAGATGTTCCAGAGGATCTATCACAAGAAGTCGATGCACTTGGGCTTGAGGATACTATAACTGATAAAGGGGGTCTTGGGAGTGATAAGGAAGCCACCATCTTTCCTTCTGACAACGGAGAAGATTTCTTCAATAATCTTCCTAGTCCTAAAGCTGATACTCCTGTGTCAACCTCTGGTGACAAAATCTCTGTGGGGGATACAATTCCTGTTATGGAACAAACGGAACAAGAGTCTGATGGACTGGAGGAGAGTGCTGACCCATCATTTGATGAATCTGTTCAACATGCTTTAGTTGTAGGAGATTATAAGGGCGCTGTTGCAAAATGCATTTCAGCAAATAAAATGGCTGATGCTTTAGTTATTGCTCATGCTGGTGGTTCTTCATTGTGGGAGAGCACACGGGATCAGTATCTTAAGATGAGCCATTCGCCTTACCTTAAGATTGTTTCTGCAATGGTGAGCAACGATCTCTTGAGTCTTGTCAACACCAGGCCTCTAAAGTTCTGGAAGGAAACACTTGCTCTTCTGTGTAGTTTTGCATCCAGAGACGAGTGGACTGTGCTTTGTGATACACTTGCTTCCAAACTTGTGGCAGCTGGTAATACGCTGGCGGCAACTATTTGTTATATATGTGCGGGAAATATTGATAAAACCGTAGAGATTTGGTCAAGAAGTCTGACCACTGAGCATGAGGGGATCGATCCTATGTCGACCTCCTCCAGGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044424 GO:0044444 GO:0044464 GO:0055044
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
SRA1 Sec16_C WD40

Protein Analysis

645

Amino Acids

69.91

Weight (kDa)

4.91

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 22 - 184 5.5e-11 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 22 - 90 3.5e-06 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 22 - 140 4.5e-08 WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 22 - 173 5.2e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 22 - 185 1.1e-10 TEP-1 second beta-propeller
WD40_Prp19 PF24814 51 - 227 5.7e-10 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 71 - 234 1e-09 Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz PF24807 106 - 254 8.8e-14 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 107 - 175 9.2e-06 WDHD1 first WD40 domain
Beta-prop_WDR3_1st PF25173 131 - 271 1.5e-11 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 152 - 266 3.1e-08 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 155 - 272 3.3e-11 WDR5 beta-propeller domain
TPR_GEMI5 PF23774 488 - 628 5.7e-07 GEMI5 TPR domain
TPR_Sec16 PF12931 495 - 615 7.4e-08 Sec16 Sec23-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010028)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G63460 AT3G63460 AT3G63460
fragaria_vesca FvH4_7g01850 FvH4_7g01850 FvH4_7g01850
malus_domestica MD02G1300000.v1.1 MD07G1024900.v1.1
prunus_persica Prupe.2G024600_v2.0.a1
pyrus_communis pycom02g25200 pycom07g01920
rosa_chinensis RchiOBHm_Chr1g0318481
rosa_laevigata RLG00000030534
rosa_multiflora Rmu_ssc0000021.1_g000001
rosa_roxburghii Rroxscaffold_4G00329170
rosa_rugosa Rorug01G0021600.1
rosa_samantha Rh1AG034000 Rh1BG030000 Rh1CG033500 Rh1DG037100
rosa_wichuraiana Rw1G002700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1512
AccB1I GGYRCC 1 cut(s) 719
AccI GTMKAC 1 cut(s) 1916
AccIII TCCGGA 1 cut(s) 124
AciI CCGC 4 cut(s) 131, 950, 1817, 1841
AclWI GGATC 6 cut(s) 112, 316, 1227, 1617, 1901, 1910
AcsI RAATTY 6 cut(s) 47, 191, 243, 730, 801, 1013
AcuI CTGAAG 2 cut(s) 129, 495
AfaI GTAC 2 cut(s) 759, 969
AfiI CCNNNNNNNGG 8 cut(s) 127, 131, 182, 299, 325, 898, 1036, 1926
AflII CTTAAG 2 cut(s) 1619, 1643
AflIII ACRYGT 1 cut(s) 647
AgsI TTSAA 6 cut(s) 22, 191, 1019, 1136, 1336, 1487
AjnI CCWGG 5 cut(s) 318, 760, 1101, 1694, 1925
AjuI GAANNNNNNNTTGG 4 cut(s) 39, 71, 834, 866
AluBI AGCT 7 cut(s) 499, 633, 872, 975, 1022, 1358, 1802
AluI AGCT 7 cut(s) 499, 633, 872, 975, 1022, 1358, 1802
Alw21I GWGCWC 3 cut(s) 464, 874, 1604
Alw26I GTCTC 1 cut(s) 1746
AlwI GGATC 6 cut(s) 112, 316, 1227, 1617, 1901, 1910
AlwNI CAGNNNCTG 1 cut(s) 689
Aor13HI TCCGGA 1 cut(s) 124
AoxI GGCC 3 cut(s) 4, 172, 1697
ApeKI GCWGC 4 cut(s) 314, 822, 1022, 1799
ApoI RAATTY 6 cut(s) 47, 191, 243, 730, 801, 1013
ArsI GACNNNNNNTTYG 2 cut(s) 1454, 1486
Asp700I GAANNNNTTC 2 cut(s) 1209, 1482
AspLEI GCGC 2 cut(s) 891, 1520
AspS9I GGNCC 5 cut(s) 4, 173, 355, 406, 860
AsuHPI GGTGA 7 cut(s) 251, 335, 519, 558, 1009, 1394, 1675
AvaII GGWCC 3 cut(s) 355, 406, 860
AxyI CCTNAGG 1 cut(s) 1191
BaeGI GKGCMC 1 cut(s) 591
BaeI ACNNNNGTAYC 2 cut(s) 1353, 1386
BanI GGYRCC 1 cut(s) 719
BanII GRGCYC 2 cut(s) 63, 874
BbsI GAAGAC 1 cut(s) 460
Bbv12I GWGCWC 3 cut(s) 464, 874, 1604
BbvI GCAGC 4 cut(s) 301, 834, 1009, 1811
BccI CCATC 8 cut(s) 77, 230, 515, 782, 1136, 1310, 1436, 1474
BcgI CGANNNNNNTGC 6 cut(s) 360, 394, 654, 688, 1034, 1068
BciT130I CCWGG 5 cut(s) 320, 762, 1103, 1696, 1927
BciVI GTATCC 3 cut(s) 759, 1249, 1396
BclI TGATCA 1 cut(s) 1164
BcoDI GTCTC 1 cut(s) 1746
BfaI CTAG 1 cut(s) 1347
BfmI CTRYAG 2 cut(s) 270, 690
BfoI RGCGCY 2 cut(s) 892, 1521
BfrI CTTAAG 2 cut(s) 1619, 1643
BfuI GTATCC 3 cut(s) 759, 1249, 1396
BisI GCNGC 5 cut(s) 315, 823, 1023, 1800, 1818
BlsI GCNGC 5 cut(s) 316, 824, 1024, 1801, 1819
Bme1390I CCNGG 5 cut(s) 320, 762, 1103, 1696, 1927
Bme18I GGWCC 3 cut(s) 355, 406, 860
BmgT120I GGNCC 5 cut(s) 4, 173, 355, 406, 860
BmiI GGNNCC 3 cut(s) 104, 407, 721
BmrFI CCNGG 5 cut(s) 320, 762, 1103, 1696, 1927
BmrI ACTGGG 1 cut(s) 887
BmsI GCATC 8 cut(s) 163, 230, 380, 785, 911, 1228, 1546, 1754
BmuI ACTGGG 1 cut(s) 887
BpiI GAAGAC 1 cut(s) 460
BpmI CTGGAG 3 cut(s) 783, 1469, 1909
BpuEI CTTGAG 3 cut(s) 281, 1271, 1699
Bsa29I ATCGAT 2 cut(s) 31, 1905
BsaBI GATNNNNATC 1 cut(s) 1614
BsaJI CCNNGG 3 cut(s) 318, 319, 654
BsaWI WCCGGW 1 cut(s) 124
Bsc4I CCNNNNNNNGG 8 cut(s) 127, 131, 182, 299, 325, 898, 1036, 1926
Bse118I RCCGGY 1 cut(s) 712
Bse1I ACTGG 4 cut(s) 425, 569, 893, 1452
Bse21I CCTNAGG 1 cut(s) 1191
Bse3DI GCAATG 2 cut(s) 615, 1665
Bse8I GATNNNNATC 1 cut(s) 1614
BseAI TCCGGA 1 cut(s) 124
BseBI CCWGG 5 cut(s) 320, 762, 1103, 1696, 1927
BseCI ATCGAT 2 cut(s) 31, 1905
BseDI CCNNGG 3 cut(s) 318, 319, 654
BseGI GGATG 3 cut(s) 371, 1102, 1745
BseJI GATNNNNATC 1 cut(s) 1614
BseLI CCNNNNNNNGG 8 cut(s) 127, 131, 182, 299, 325, 898, 1036, 1926
BseMI GCAATG 2 cut(s) 615, 1665
BseMII CTCAG 5 cut(s) 509, 857, 1083, 1182, 1881
BseNI ACTGG 4 cut(s) 425, 569, 893, 1452
BseRI GAGGAG 2 cut(s) 1466, 1912
BseSI GKGCMC 1 cut(s) 591
BseXI GCAGC 4 cut(s) 301, 834, 1009, 1811
BseYI CCCAGC 1 cut(s) 675
BsgI GTGCAG 1 cut(s) 876
Bsh1285I CGRYCG 1 cut(s) 35
BshFI GGCC 3 cut(s) 6, 174, 1699
BshNI GGYRCC 1 cut(s) 719
BshVI ATCGAT 2 cut(s) 31, 1905
BsiEI CGRYCG 1 cut(s) 35
BsiHKAI GWGCWC 3 cut(s) 464, 874, 1604
BsiSI CCGG 2 cut(s) 125, 713
BslFI GGGAC 5 cut(s) 269, 403, 419, 692, 1159
BslI CCNNNNNNNGG 8 cut(s) 127, 131, 182, 299, 325, 898, 1036, 1926
BsmAI GTCTC 1 cut(s) 1746
BsmBI CGTCTC 1 cut(s) 1746
BsmFI GGGAC 5 cut(s) 269, 403, 419, 692, 1159
BsnI GGCC 3 cut(s) 6, 174, 1699
Bsp1286I GDGCHC 5 cut(s) 63, 464, 591, 874, 1604
Bsp13I TCCGGA 1 cut(s) 124
Bsp1407I TGTACA 1 cut(s) 967
BspACI CCGC 4 cut(s) 131, 950, 1817, 1841
BspANI GGCC 3 cut(s) 6, 174, 1699
BspCNI CTCAG 5 cut(s) 508, 858, 1084, 1183, 1882
BspDI ATCGAT 2 cut(s) 31, 1905
BspEI TCCGGA 1 cut(s) 124
BspLI GGNNCC 3 cut(s) 104, 407, 721
BspMAI CTGCAG 2 cut(s) 274, 694
BspPI GGATC 6 cut(s) 112, 316, 1227, 1617, 1901, 1910
BspQI GCTCTTC 1 cut(s) 1734
BspT107I GGYRCC 1 cut(s) 719
BspTI CTTAAG 2 cut(s) 1619, 1643
BsrDI GCAATG 2 cut(s) 615, 1665
BsrFI RCCGGY 1 cut(s) 712
BsrGI TGTACA 1 cut(s) 967
BsrI ACTGG 4 cut(s) 425, 569, 893, 1452
BssAI RCCGGY 1 cut(s) 712
BssECI CCNNGG 3 cut(s) 318, 319, 654
BssT1I CCWWGG 1 cut(s) 654
Bst2UI CCWGG 5 cut(s) 320, 762, 1103, 1696, 1927
Bst4CI ACNGT 6 cut(s) 397, 459, 685, 992, 1765, 1861
Bst6I CTCTTC 1 cut(s) 1734
BstAFI CTTAAG 2 cut(s) 1619, 1643
BstAUI TGTACA 1 cut(s) 967
BstC8I GCNNGC 3 cut(s) 714, 718, 1815
BstDEI CTNAG 6 cut(s) 495, 536, 866, 1092, 1191, 1890
BstENI CCTNNNNNAGG 1 cut(s) 1924
BstF5I GGATG 3 cut(s) 371, 1102, 1745
BstH2I RGCGCY 2 cut(s) 892, 1521
BstHHI GCGC 2 cut(s) 891, 1520
BstMAI GTCTC 1 cut(s) 1746
BstMCI CGRYCG 1 cut(s) 35
BstMWI GCNNNNNNNGC 2 cut(s) 227, 918
BstNI CCWGG 5 cut(s) 320, 762, 1103, 1696, 1927
BstNSI RCATGY 2 cut(s) 651, 1493
BstSCI CCNGG 5 cut(s) 318, 760, 1101, 1694, 1925
BstSFI CTRYAG 2 cut(s) 270, 690
BstSLI GKGCMC 1 cut(s) 591
BstV1I GCAGC 4 cut(s) 301, 834, 1009, 1811
BstV2I GAAGAC 1 cut(s) 460
BstX2I RGATCY 2 cut(s) 308, 1219
BstXI CCANNNNNNTGG 1 cut(s) 1795
BstYI RGATCY 2 cut(s) 308, 1219
Bsu15I ATCGAT 2 cut(s) 31, 1905
Bsu36I CCTNAGG 1 cut(s) 1191
BsuI GTATCC 3 cut(s) 759, 1249, 1396
BsuRI GGCC 3 cut(s) 6, 174, 1699
BsuTUI ATCGAT 2 cut(s) 31, 1905
BtgZI GCGATG 1 cut(s) 49
BtsCI GGATG 3 cut(s) 371, 1102, 1745
BtsI GCAGTG 2 cut(s) 13, 479
BtsIMutI CAGTG 3 cut(s) 13, 479, 1887
Cac8I GCNNGC 3 cut(s) 714, 718, 1815
CaiI CAGNNNCTG 1 cut(s) 689
CfoI GCGC 2 cut(s) 891, 1520
Cfr10I RCCGGY 1 cut(s) 712
Cfr13I GGNCC 5 cut(s) 4, 173, 355, 406, 860
ClaI ATCGAT 2 cut(s) 31, 1905
Csp6I GTAC 2 cut(s) 758, 968
CspCI CAANNNNNGTGG 2 cut(s) 286, 321
CviAII CATG 6 cut(s) 26, 648, 1110, 1490, 1574, 1895
CviQI GTAC 2 cut(s) 758, 968
DdeI CTNAG 6 cut(s) 495, 536, 866, 1092, 1191, 1890
Eam1104I CTCTTC 1 cut(s) 1734
EarI CTCTTC 1 cut(s) 1734
Ecl136II GAGCTC 1 cut(s) 872
Eco130I CCWWGG 1 cut(s) 654
Eco147I AGGCCT 1 cut(s) 1699
Eco24I GRGCYC 2 cut(s) 63, 874
Eco32I GATATC 2 cut(s) 97, 771
Eco47I GGWCC 3 cut(s) 355, 406, 860
Eco53kI GAGCTC 1 cut(s) 872
Eco57I CTGAAG 2 cut(s) 129, 495
Eco81I CCTNAGG 1 cut(s) 1191
EcoICRI GAGCTC 1 cut(s) 872
EcoNI CCTNNNNNAGG 1 cut(s) 1924
EcoO109I RGGNCCY 3 cut(s) 173, 406, 860
EcoRI GAATTC 1 cut(s) 47
EcoRII CCWGG 5 cut(s) 318, 760, 1101, 1694, 1925
EcoRV GATATC 2 cut(s) 97, 771
EcoT14I CCWWGG 1 cut(s) 654
EcoT22I ATGCAT 1 cut(s) 1535
EcoT38I GRGCYC 2 cut(s) 63, 874
ErhI CCWWGG 1 cut(s) 654
Esp3I CGTCTC 1 cut(s) 1746
FaeI CATG 6 cut(s) 29, 651, 1113, 1493, 1577, 1898
FalI AAGNNNNNCTT 2 cut(s) 1263, 1295
FaqI GGGAC 5 cut(s) 269, 403, 419, 692, 1159
FatI CATG 6 cut(s) 25, 647, 1109, 1489, 1573, 1894
FauI CCCGC 3 cut(s) 124, 943, 1834
FbaI TGATCA 1 cut(s) 1164
FblI GTMKAC 1 cut(s) 1916
Fnu4HI GCNGC 5 cut(s) 315, 823, 1023, 1800, 1818
FokI GGATG 3 cut(s) 358, 1109, 1732
FriOI GRGCYC 2 cut(s) 63, 874
Fsp4HI GCNGC 5 cut(s) 315, 823, 1023, 1800, 1818
FspBI CTAG 1 cut(s) 1347
GlaI GCGC 2 cut(s) 890, 1519
GluI GCNGC 5 cut(s) 315, 823, 1023, 1800, 1818
GsaI CCCAGC 1 cut(s) 679
GsuI CTGGAG 3 cut(s) 783, 1469, 1909
HaeII RGCGCY 2 cut(s) 892, 1521
HaeIII GGCC 3 cut(s) 6, 174, 1699
HapII CCGG 2 cut(s) 125, 713
HhaI GCGC 2 cut(s) 891, 1520
Hin1II CATG 6 cut(s) 29, 651, 1113, 1493, 1577, 1898
Hin6I GCGC 2 cut(s) 889, 1518
HinP1I GCGC 2 cut(s) 889, 1518
HincII GTYRAC 3 cut(s) 1374, 1690, 1917
HindII GTYRAC 3 cut(s) 1374, 1690, 1917
HinfI GANTC 8 cut(s) 443, 478, 1000, 1082, 1088, 1436, 1478, 1681
HpaII CCGG 2 cut(s) 125, 713
HphI GGTGA 7 cut(s) 251, 335, 519, 558, 1009, 1394, 1675
Hpy166II GTNNAC 7 cut(s) 74, 527, 970, 1374, 1690, 1761, 1917
Hpy188III TCNNGA 9 cut(s) 100, 125, 188, 482, 1214, 1678, 1711, 1749, 1875
Hpy8I GTNNAC 7 cut(s) 74, 527, 970, 1374, 1690, 1761, 1917
HpyAV CCTTC 3 cut(s) 540, 1320, 1708
HpyCH4III ACNGT 6 cut(s) 397, 459, 685, 992, 1765, 1861
HpyF10VI GCNNNNNNNGC 2 cut(s) 227, 918
HpyF3I CTNAG 6 cut(s) 495, 536, 866, 1092, 1191, 1890
Hsp92II CATG 6 cut(s) 29, 651, 1113, 1493, 1577, 1898
HspAI GCGC 2 cut(s) 889, 1518
Kpn2I TCCGGA 1 cut(s) 124
KroI GCCGGC 1 cut(s) 712
KroNI GCCGGC 1 cut(s) 714
Ksp22I TGATCA 1 cut(s) 1164
LguI GCTCTTC 1 cut(s) 1734
LmnI GCTCC 2 cut(s) 638, 877
Lsp1109I GCAGC 4 cut(s) 301, 834, 1009, 1811
LweI GCATC 8 cut(s) 163, 230, 380, 785, 911, 1228, 1546, 1754
MaeI CTAG 1 cut(s) 1347
MaeIII GTNAC 3 cut(s) 564, 979, 1382
MfeI CAATTG 2 cut(s) 201, 724
MflI RGATCY 2 cut(s) 308, 1219
MhlI GDGCHC 5 cut(s) 63, 464, 591, 874, 1604
MlyI GAGTC 3 cut(s) 1091, 1445, 1690
MmeI TCCRAC 1 cut(s) 382
Mph1103I ATGCAT 1 cut(s) 1535
MroI TCCGGA 1 cut(s) 124
MroNI GCCGGC 1 cut(s) 712
MroXI GAANNNNTTC 2 cut(s) 1209, 1482
MseI TTAA 7 cut(s) 195, 383, 573, 1121, 1620, 1644, 1933
MslI CAYNNNNRTG 1 cut(s) 1578
MspA1I CMGCKG 1 cut(s) 1802
MspCI CTTAAG 2 cut(s) 1619, 1643
MspI CCGG 2 cut(s) 125, 713
MspR9I CCNGG 5 cut(s) 320, 762, 1103, 1696, 1927
MunI CAATTG 2 cut(s) 201, 724
MvaI CCWGG 5 cut(s) 320, 762, 1103, 1696, 1927
MwoI GCNNNNNNNGC 2 cut(s) 227, 918
NaeI GCCGGC 1 cut(s) 714
NgoMIV GCCGGC 1 cut(s) 712
NlaIII CATG 6 cut(s) 29, 651, 1113, 1493, 1577, 1898
NlaIV GGNNCC 3 cut(s) 104, 407, 721
NmuCI GTSAC 2 cut(s) 564, 1382
NsiI ATGCAT 1 cut(s) 1535
NspI RCATGY 2 cut(s) 651, 1493
PasI CCCWGGG 1 cut(s) 319
PceI AGGCCT 1 cut(s) 1699
PciI ACATGT 1 cut(s) 647
PciSI GCTCTTC 1 cut(s) 1734
PdiI GCCGGC 1 cut(s) 714
PdmI GAANNNNTTC 2 cut(s) 1209, 1482
PfeI GAWTC 5 cut(s) 443, 478, 1000, 1088, 1478
PfoI TCCNGGA 1 cut(s) 1925
PkrI GCNGC 5 cut(s) 316, 824, 1024, 1801, 1819
Ple19I CGATCG 1 cut(s) 35
PleI GAGTC 3 cut(s) 1090, 1444, 1689
PpsI GAGTC 3 cut(s) 1090, 1444, 1689
PpuMI RGGWCCY 2 cut(s) 406, 860
PscI ACATGT 1 cut(s) 647
PsiI TTATAA 1 cut(s) 1512
Psp124BI GAGCTC 1 cut(s) 874
Psp5II RGGWCCY 2 cut(s) 406, 860
Psp6I CCWGG 5 cut(s) 318, 760, 1101, 1694, 1925
PspFI CCCAGC 1 cut(s) 675
PspGI CCWGG 5 cut(s) 318, 760, 1101, 1694, 1925
PspN4I GGNNCC 3 cut(s) 104, 407, 721
PspPI GGNCC 5 cut(s) 4, 173, 355, 406, 860
PspPPI RGGWCCY 2 cut(s) 406, 860
PstI CTGCAG 2 cut(s) 274, 694
PstNI CAGNNNCTG 1 cut(s) 689
PsuI RGATCY 2 cut(s) 308, 1219
PvuI CGATCG 1 cut(s) 35
PvuII CAGCTG 1 cut(s) 1802
RsaI GTAC 2 cut(s) 759, 969
RsaNI GTAC 2 cut(s) 758, 968
RseI CAYNNNNRTG 1 cut(s) 1578
SacI GAGCTC 1 cut(s) 874
SalI GTCGAC 1 cut(s) 1915
SapI GCTCTTC 1 cut(s) 1734
SaqAI TTAA 7 cut(s) 195, 383, 573, 1121, 1620, 1644, 1933
SatI GCNGC 5 cut(s) 315, 823, 1023, 1800, 1818
Sau96I GGNCC 5 cut(s) 4, 173, 355, 406, 860
SchI GAGTC 3 cut(s) 1091, 1445, 1690
ScrFI CCNGG 5 cut(s) 320, 762, 1103, 1696, 1927
SduI GDGCHC 5 cut(s) 63, 464, 591, 874, 1604
SfaNI GCATC 8 cut(s) 163, 230, 380, 785, 911, 1228, 1546, 1754
SfcI CTRYAG 2 cut(s) 270, 690
SinI GGWCC 3 cut(s) 355, 406, 860
SmiMI CAYNNNNRTG 1 cut(s) 1578
SmlI CTYRAG 5 cut(s) 296, 1250, 1619, 1643, 1678
SmoI CTYRAG 5 cut(s) 296, 1250, 1619, 1643, 1678
SseBI AGGCCT 1 cut(s) 1699
SsiI CCGC 4 cut(s) 131, 950, 1817, 1841
SspI AATATT 2 cut(s) 811, 1849
SspMI CTAG 1 cut(s) 1347
SstI GAGCTC 1 cut(s) 874
StuI AGGCCT 1 cut(s) 1699
StyD4I CCNGG 5 cut(s) 318, 760, 1101, 1694, 1925
StyI CCWWGG 1 cut(s) 654
TaaI ACNGT 6 cut(s) 397, 459, 685, 992, 1765, 1861
TaqI TCGA 6 cut(s) 31, 664, 1054, 1236, 1905, 1916
TatI WGTACW 1 cut(s) 967
TauI GCSGC 1 cut(s) 1820
TfiI GAWTC 5 cut(s) 443, 478, 1000, 1088, 1478
Tru1I TTAA 7 cut(s) 195, 383, 573, 1121, 1620, 1644, 1933
Tru9I TTAA 7 cut(s) 195, 383, 573, 1121, 1620, 1644, 1933
TscAI CASTG 3 cut(s) 20, 479, 1894
TseFI GTSAC 2 cut(s) 564, 1382
TseI GCWGC 4 cut(s) 314, 822, 1022, 1799
Tsp45I GTSAC 2 cut(s) 564, 1382
TspDTI ATGAA 4 cut(s) 531, 771, 1491, 1578
TspGWI ACGGA 3 cut(s) 110, 1335, 1442
TspRI CASTG 3 cut(s) 20, 479, 1894
Vha464I CTTAAG 2 cut(s) 1619, 1643
VpaK11BI GGWCC 3 cut(s) 355, 406, 860
XagI CCTNNNNNAGG 1 cut(s) 1924
XapI RAATTY 6 cut(s) 47, 191, 243, 730, 801, 1013
XceI RCATGY 2 cut(s) 651, 1493
XmiI GTMKAC 1 cut(s) 1916
XmnI GAANNNNTTC 2 cut(s) 1209, 1482
XspI CTAG 1 cut(s) 1347
Zsp2I ATGCAT 1 cut(s) 1535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.