RLG00000030534

transport protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0010028
Physical Location & Seq
Reverse (-)
63119081 .. 63125929
6849 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030534

Sequence Viewer

Length: 2484 bp
ATGTCATGGTGTCCTAATGACAGCTCTTATCTGCTAACGTGTGCCAAGGACAATCGAACTATTTGTTGGGACACAGTTTCTGCAGAGATTGTATGTGAATTGCCTGCAGGCACCAACTGGAATTTTGATGTGCATTGGTATCCGAAAGTACCTGGAGTGATATCAGCGTCTTCATTTGATGGAAAAATTGGAATTTATAATATTGAGGGTTGCAGTAGATATGGTGTGGGGGAGAGCGACTTTGGTGCTGGACCTCTCAGAGCTCCAAAATGGTATAAGCGCCCAGCTGGAGCATCTTTTGGTTTCGGAGGCAAGATCGTGTCCTTTCACCCTAGTTCATCTGGTGTTTCAGAGGTTTATGTGCACAGCTTGGTTACTGAACAAAGTTTGGTGGATCGCTCATCTGAATTTGAAAGTGCAATACAAAATGGAGAAAGGTCTTCACTCCGGGCATTATGTGACAAGAAAGCACAGGAGTCTGAGTCTGCGGATGACCGGGAAACATGGGGCTTGTTAAGGGTTATGTTTGAAGATGATGGGACTGCAAGGACAAACCTGATCACACATCTTGGTTTCAGTGTACCTGAGGAAATAAAAGAAACAGTTCAAGATGGTCTATCAGCGGAAGTCAGTGCACCTGGGATTGAGGATTCAACAACTGATAAAGCTGGTTTGGGTGCTGAGAAGGAAACTACAATTTTTCCTTCTGACAATGGAGAAGATTTCTTTAACAATCTTCCTAGTCCTAAAGCTGACACTCCTCATTCAACCTCTGGTGACAAATTTGTTGTGGCGGATACAGTTCCTATTACAGACCAAGTTCAAGAAGAACCTGATGAACCGGAAGAGAGCGCCGATCCTTCATTTGATGAATCAGTTCAACATGCTTTAGCTGTAGGAGATTACAAAGGGGCTGTTGCAAAGTGCATTTCAGCAAATAAAATGGCTGATGCTTTAGTTATTGCTCATGCTGGTGGTCCGACGTTGTGGGAGCGCACTCGGGATCAATACCTTAAGTTGAGCCATTCACCTTACCTTAAGATTGTTTCTGCAATGGTGAGCAATGATCTATCAAGTCTTGTTAACACCAGACCACTCAAATTCTGGAAGGAAACGCTTGCTGTTCTCTGTAGTTTTTCATCAATAGAGGCGTGGGAAGGTCTCTGTAATGCGCTTGCTGCTAGACTTATAGCTGCTGGTAATACCCTGGCAGCAACTATTTGTTATATATGTGCGGGAAATATTGACAAGACAGTAGATATTTGGTCAAGGAATCTGACAACTGATCATGAAGGGAGATCCTATGTTGACCTTCTTCAGGAATTAATGGAGAAGACTATAGTACTTGCCTTGGCAACTGGACAGAAGCGATTTAGTGCTTCTTTGTGCAAACTTGTTGAGAAATATGCTGAAATTTTAGCTAGTCAAGGTCTTTTAACAACAGCAATGGAGTACCTGAAACTCTTGGGCTCTGATGAATTGTCTCCTGAACTTGTGATCTTAAGGGATCGTATTGCTCTTTCTACAGAACCCGTAGAGAAAGTCCCCAAGACTGTAACATTTGAAAACCCTGATCAAACCCCTTATGTGGGTGGGAACCCTCCATATTATCAGGAACCAGCTCAGCCACCTGTGAATCCGTATGGTGGCTATTCTGAACCTGTGACTCCCCCGTATGCAGGTGGAGGATATGTCCCATACCCCCAGCCTCCATCACAGACTCCATCACAGCCTCCTAACATGTTTGTTCCTACACCAACACCTCAACTACCACAGGAAAAATATCCTGTACCTCCTGCTTCTACTCAGCCTAACGTGTCCTTTATTCCTTCGACTCCTCCTGCTTTGCCAAATTTGGAGAAGTATCATCAGCCTACGCTGGGTTCTCAATTGTATCCTGGAACTGCTTTTCAACCTATGCAAACAGGGCTTGGTTCAGGAGCCCCTCATCAATCACATGTCAATCCAGTTCCTGCAAATAAGATGCCTCATGCTGTACCCCCTCCACAAAGGGGATTTATGCCAGTCACTACTTCAGGAGTTGTTCAGGGGACTCTGCAGCCATCTAGTCCCCCTGCTCCACCTCGACCTTCCGTGGCTCCTGCCCCACCACCTACCATACAGACAGTTGATACTTCAAAAGTTCCCGGCCACCAAAAACCCGTAATCGCAACATTAGGGAGACTTTTCAATGAAACATCTGAAGCGTTGGGAGGTTCACGTGCAAATCCTGCTAAGAAGCGTGAAATAGAAGACAATTCAAGGAAGATAGGTGCTCTGTTTGCCAAACTCAACAGCGGAGACATATCTAAAAATGCTGGTGATAAACTTGTGCAGCTGTGCCAGGCACTGGATAATGGTGATTTCACCACTGCCCTAGGCATTCAGGTACAACTTACCACTAGTGAGTGGGATGAGTGCAACTTTTGGCTTGCAACTCTCAAGCGGATGATCAAGACCAGGCAAAATATGAGATTAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044424 GO:0044444 GO:0044464 GO:0055044
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
SRA1 Sec16_C WD40

Protein Analysis

828

Amino Acids

89.44

Weight (kDa)

5.11

Isoelectric Point (pI)

48.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_Sec16 PF12931 293 - 488 2e-09 Sec16 Sec23-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010028)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G63460 AT3G63460 AT3G63460
fragaria_vesca FvH4_7g01850 FvH4_7g01850 FvH4_7g01850
malus_domestica MD02G1300000.v1.1 MD07G1024900.v1.1
prunus_persica Prupe.2G024600_v2.0.a1
pyrus_communis pycom02g25200 pycom07g01920
rosa_chinensis RchiOBHm_Chr1g0318481
rosa_laevigata RLG00000030534
rosa_multiflora Rmu_ssc0000021.1_g000001
rosa_roxburghii Rroxscaffold_4G00329170
rosa_rugosa Rorug01G0021600.1
rosa_samantha Rh1AG034000 Rh1BG030000 Rh1CG033500 Rh1DG037100
rosa_wichuraiana Rw1G002700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 198
AarI CACCTGC 1 cut(s) 1670
Acc36I ACCTGC 1 cut(s) 1670
AccB1I GGYRCC 1 cut(s) 110
AccB7I CCANNNNNTGG 1 cut(s) 2350
AciI CCGC 6 cut(s) 488, 623, 794, 1235, 2298, 2446
AclWI GGATC 5 cut(s) 402, 851, 1011, 1293, 1515
AcoI YGGCCR 1 cut(s) 2149
AcsI RAATTY 7 cut(s) 121, 192, 407, 782, 1100, 1413, 1852
AcuI CTGAAG 3 cut(s) 1301, 2019, 2223
AcvI CACGTG 1 cut(s) 2222
AfaI GTAC 7 cut(s) 150, 582, 1344, 1454, 1791, 1998, 2391
AfiI CCNNNNNNNGG 8 cut(s) 1318, 1588, 1589, 1646, 1679, 1880, 2012, 2350
AflII CTTAAG 3 cut(s) 1013, 1037, 1501
AflIII ACRYGT 4 cut(s) 38, 1740, 1815, 1957
AhlI ACTAGT 1 cut(s) 2402
AjnI CCWGG 6 cut(s) 151, 637, 1206, 1897, 2343, 2459
AjuI GAANNNNNNNTTGG 2 cut(s) 49, 81
Alw21I GWGCWC 4 cut(s) 265, 366, 637, 2278
Alw26I GTCTC 4 cut(s) 1166, 1488, 2176, 2295
Alw44I GTGCAC 2 cut(s) 362, 633
AlwI GGATC 5 cut(s) 402, 851, 1011, 1293, 1515
AlwNI CAGNNNCTG 3 cut(s) 80, 1973, 2350
Ama87I CYCGRG 1 cut(s) 999
AoxI GGCC 1 cut(s) 2149
ApaLI GTGCAC 2 cut(s) 362, 633
ApeKI GCWGC 5 cut(s) 1178, 1193, 1211, 2059, 2335
ApoI RAATTY 7 cut(s) 121, 192, 407, 782, 1100, 1413, 1852
AseI ATTAAT 1 cut(s) 1325
Asp700I GAANNNNTTC 2 cut(s) 603, 876
AspA2I CCTAGG 1 cut(s) 2377
AspLEI GCGC 4 cut(s) 282, 854, 996, 1174
AspS9I GGNCC 2 cut(s) 251, 977
AsuC2I CCSGG 3 cut(s) 449, 497, 2148
AsuHPI GGTGA 7 cut(s) 320, 788, 1020, 1069, 2333, 2359, 2372
AvaI CYCGRG 1 cut(s) 999
AvaII GGWCC 2 cut(s) 251, 977
AvrII CCTAGG 1 cut(s) 2377
AxyI CCTNAGG 1 cut(s) 585
BaeGI GKGCMC 2 cut(s) 366, 637
BanI GGYRCC 1 cut(s) 110
BanII GRGCYC 3 cut(s) 265, 1472, 1945
BbrPI CACGTG 1 cut(s) 2222
BbsI GAAGAC 4 cut(s) 162, 432, 1340, 2259
Bbv12I GWGCWC 4 cut(s) 265, 366, 637, 2278
BbvI GCAGC 5 cut(s) 1165, 1180, 1223, 2071, 2347
BccI CCATC 6 cut(s) 173, 530, 605, 1720, 1732, 2071
BcgI CGANNNNNNTGC 2 cut(s) 227, 261
BciT130I CCWGG 6 cut(s) 153, 639, 1208, 1899, 2345, 2461
BciVI GTATCC 3 cut(s) 150, 790, 1905
BclI TGATCA 4 cut(s) 558, 1285, 1573, 2451
BcnI CCSGG 3 cut(s) 449, 497, 2148
BcoDI GTCTC 4 cut(s) 1166, 1488, 2176, 2295
BcuI ACTAGT 1 cut(s) 2402
BfaI CTAG 7 cut(s) 333, 741, 1182, 1422, 2067, 2378, 2403
BfmI CTRYAG 7 cut(s) 81, 105, 894, 1129, 1338, 1524, 2057
BfoI RGCGCY 2 cut(s) 283, 855
BfrI CTTAAG 3 cut(s) 1013, 1037, 1501
BfuAI ACCTGC 1 cut(s) 1670
BfuI GTATCC 3 cut(s) 150, 790, 1905
BisI GCNGC 5 cut(s) 1179, 1194, 1212, 2060, 2336
BlnI CCTAGG 1 cut(s) 2377
BlpI GCTNAGC 1 cut(s) 1623
BlsI GCNGC 5 cut(s) 1180, 1195, 1213, 2061, 2337
BmcAI AGTACT 1 cut(s) 1344
Bme1390I CCNGG 9 cut(s) 153, 449, 497, 639, 1208, 1899, 2148, 2345, 2461
Bme18I GGWCC 2 cut(s) 251, 977
BmeT110I CYCGRG 1 cut(s) 999
BmgT120I GGNCC 2 cut(s) 251, 977
BmiI GGNNCC 5 cut(s) 112, 1598, 1617, 1942, 2100
BmrFI CCNGG 9 cut(s) 153, 449, 497, 639, 1208, 1899, 2148, 2345, 2461
BmsI GCATC 3 cut(s) 302, 940, 1974
BpiI GAAGAC 4 cut(s) 162, 432, 1340, 2259
BpmI CTGGAG 2 cut(s) 174, 309
Bpu1102I GCTNAGC 1 cut(s) 1623
BpuEI CTTGAG 1 cut(s) 2426
BpuMI CCSGG 3 cut(s) 449, 497, 2148
BsaAI YACGTR 1 cut(s) 2222
BsaI GGTCTC 1 cut(s) 1166
BsaJI CCNNGG 6 cut(s) 45, 638, 1206, 1350, 2094, 2377
BsaWI WCCGGW 1 cut(s) 841
BsaXI ACNNNNNCTCC 4 cut(s) 467, 497, 1677, 1707
Bsc4I CCNNNNNNNGG 8 cut(s) 1318, 1588, 1589, 1646, 1679, 1880, 2012, 2350
Bse1I ACTGG 5 cut(s) 122, 1363, 1967, 2024, 2355
Bse21I CCTNAGG 1 cut(s) 585
Bse3DI GCAATG 3 cut(s) 1059, 1069, 1452
BseBI CCWGG 6 cut(s) 153, 639, 1208, 1899, 2345, 2461
BseDI CCNNGG 6 cut(s) 45, 638, 1206, 1350, 2094, 2377
BseGI GGATG 3 cut(s) 496, 2419, 2454
BseLI CCNNNNNNNGG 8 cut(s) 1318, 1588, 1589, 1646, 1679, 1880, 2012, 2350
BseMI GCAATG 3 cut(s) 1059, 1069, 1452
BseMII CTCAG 6 cut(s) 271, 471, 576, 672, 1637, 1820
BseNI ACTGG 5 cut(s) 122, 1363, 1967, 2024, 2355
BseRI GAGGAG 2 cut(s) 750, 1827
BseSI GKGCMC 2 cut(s) 366, 637
BseXI GCAGC 5 cut(s) 1165, 1180, 1223, 2071, 2347
BseYI CCCAGC 3 cut(s) 283, 1704, 1879
BsgI GTGCAG 1 cut(s) 2354
BshFI GGCC 1 cut(s) 2151
BshNI GGYRCC 1 cut(s) 110
BsiHKAI GWGCWC 4 cut(s) 265, 366, 637, 2278
BsiHKCI CYCGRG 1 cut(s) 999
BsiSI CCGG 4 cut(s) 448, 496, 842, 2148
BslFI GGGAC 6 cut(s) 83, 553, 1529, 1679, 2055, 2065
BslI CCNNNNNNNGG 8 cut(s) 1318, 1588, 1589, 1646, 1679, 1880, 2012, 2350
BsmAI GTCTC 4 cut(s) 1166, 1488, 2176, 2295
BsmFI GGGAC 6 cut(s) 83, 553, 1529, 1679, 2055, 2065
BsmI GAATGC 1 cut(s) 2382
BsnI GGCC 1 cut(s) 2151
Bso31I GGTCTC 1 cut(s) 1166
BsoBI CYCGRG 1 cut(s) 999
Bsp1286I GDGCHC 6 cut(s) 265, 366, 637, 1472, 1945, 2278
Bsp1720I GCTNAGC 1 cut(s) 1623
BspACI CCGC 6 cut(s) 488, 623, 794, 1235, 2298, 2446
BspANI GGCC 1 cut(s) 2151
BspCNI CTCAG 6 cut(s) 270, 472, 577, 673, 1636, 1819
BspHI TCATGA 1 cut(s) 1288
BspLI GGNNCC 5 cut(s) 112, 1598, 1617, 1942, 2100
BspMAI CTGCAG 3 cut(s) 85, 109, 2061
BspMI ACCTGC 1 cut(s) 1670
BspPI GGATC 5 cut(s) 402, 851, 1011, 1293, 1515
BspT107I GGYRCC 1 cut(s) 110
BspTI CTTAAG 3 cut(s) 1013, 1037, 1501
BspTNI GGTCTC 1 cut(s) 1166
BsrDI GCAATG 3 cut(s) 1059, 1069, 1452
BsrI ACTGG 5 cut(s) 122, 1363, 1967, 2024, 2355
BssECI CCNNGG 6 cut(s) 45, 638, 1206, 1350, 2094, 2377
BssT1I CCWWGG 3 cut(s) 45, 1350, 2377
Bst2UI CCWGG 6 cut(s) 153, 639, 1208, 1899, 2345, 2461
Bst4CI ACNGT 6 cut(s) 76, 604, 802, 1255, 1555, 2128
Bst6I CTCTTC 1 cut(s) 840
BstAFI CTTAAG 3 cut(s) 1013, 1037, 1501
BstAPI GCANNNNNTGC 1 cut(s) 2231
BstBAI YACGTR 1 cut(s) 2222
BstC8I GCNNGC 5 cut(s) 105, 109, 1119, 1176, 2433
BstDEI CTNAG 7 cut(s) 257, 480, 585, 681, 1623, 1806, 2235
BstDSI CCRYGG 1 cut(s) 2094
BstENI CCTNNNNNAGG 1 cut(s) 1316
BstF5I GGATG 3 cut(s) 496, 2419, 2454
BstH2I RGCGCY 2 cut(s) 283, 855
BstHHI GCGC 4 cut(s) 282, 854, 996, 1174
BstMAI GTCTC 4 cut(s) 1166, 1488, 2176, 2295
BstMWI GCNNNNNNNGC 4 cut(s) 1178, 1927, 2231, 2282
BstNI CCWGG 6 cut(s) 153, 639, 1208, 1899, 2345, 2461
BstNSI RCATGY 3 cut(s) 887, 1744, 1961
BstSCI CCNGG 9 cut(s) 151, 447, 495, 637, 1206, 1897, 2146, 2343, 2459
BstSFI CTRYAG 7 cut(s) 81, 105, 894, 1129, 1338, 1524, 2057
BstSLI GKGCMC 2 cut(s) 366, 637
BstV1I GCAGC 5 cut(s) 1165, 1180, 1223, 2071, 2347
BstV2I GAAGAC 4 cut(s) 162, 432, 1340, 2259
BstX2I RGATCY 1 cut(s) 1298
BstYI RGATCY 1 cut(s) 1298
Bsu36I CCTNAGG 1 cut(s) 585
BsuI GTATCC 3 cut(s) 150, 790, 1905
BsuRI GGCC 1 cut(s) 2151
BtgI CCRYGG 1 cut(s) 2094
BtsCI GGATG 3 cut(s) 496, 2419, 2454
BtsI GCAGTG 1 cut(s) 2370
BtsIMutI CAGTG 4 cut(s) 583, 637, 2348, 2370
BveI ACCTGC 1 cut(s) 1670
Cac8I GCNNGC 5 cut(s) 105, 109, 1119, 1176, 2433
CaiI CAGNNNCTG 3 cut(s) 80, 1973, 2350
CciI TCATGA 1 cut(s) 1288
CfoI GCGC 4 cut(s) 282, 854, 996, 1174
Cfr13I GGNCC 2 cut(s) 251, 977
CseI GACGC 1 cut(s) 156
Csp6I GTAC 7 cut(s) 149, 581, 1343, 1453, 1790, 1997, 2390
CviAII CATG 8 cut(s) 6, 504, 884, 968, 1289, 1741, 1958, 1991
CviQI GTAC 7 cut(s) 149, 581, 1343, 1453, 1790, 1997, 2390
DdeI CTNAG 7 cut(s) 257, 480, 585, 681, 1623, 1806, 2235
EaeI YGGCCR 1 cut(s) 2149
Eam1104I CTCTTC 1 cut(s) 840
EarI CTCTTC 1 cut(s) 840
EciI GGCGGA 1 cut(s) 809
Ecl136II GAGCTC 1 cut(s) 263
Eco130I CCWWGG 3 cut(s) 45, 1350, 2377
Eco24I GRGCYC 3 cut(s) 265, 1472, 1945
Eco31I GGTCTC 1 cut(s) 1166
Eco32I GATATC 1 cut(s) 162
Eco47I GGWCC 2 cut(s) 251, 977
Eco53kI GAGCTC 1 cut(s) 263
Eco57I CTGAAG 3 cut(s) 1301, 2019, 2223
Eco72I CACGTG 1 cut(s) 2222
Eco81I CCTNAGG 1 cut(s) 585
Eco88I CYCGRG 1 cut(s) 999
EcoICRI GAGCTC 1 cut(s) 263
EcoNI CCTNNNNNAGG 1 cut(s) 1316
EcoRII CCWGG 6 cut(s) 151, 637, 1206, 1897, 2343, 2459
EcoRV GATATC 1 cut(s) 162
EcoT14I CCWWGG 3 cut(s) 45, 1350, 2377
EcoT38I GRGCYC 3 cut(s) 265, 1472, 1945
ErhI CCWWGG 3 cut(s) 45, 1350, 2377
FaeI CATG 8 cut(s) 9, 507, 887, 971, 1292, 1744, 1961, 1994
FaqI GGGAC 6 cut(s) 83, 553, 1529, 1679, 2055, 2065
FatI CATG 8 cut(s) 5, 503, 883, 967, 1288, 1740, 1957, 1990
FauI CCCGC 1 cut(s) 1228
FbaI TGATCA 4 cut(s) 558, 1285, 1573, 2451
Fnu4HI GCNGC 5 cut(s) 1179, 1194, 1212, 2060, 2336
FokI GGATG 3 cut(s) 503, 2426, 2461
FriOI GRGCYC 3 cut(s) 265, 1472, 1945
Fsp4HI GCNGC 5 cut(s) 1179, 1194, 1212, 2060, 2336
FspBI CTAG 7 cut(s) 333, 741, 1182, 1422, 2067, 2378, 2403
GlaI GCGC 4 cut(s) 281, 853, 995, 1173
GluI GCNGC 5 cut(s) 1179, 1194, 1212, 2060, 2336
GsaI CCCAGC 3 cut(s) 287, 1708, 1883
GsuI CTGGAG 2 cut(s) 174, 309
HaeII RGCGCY 2 cut(s) 283, 855
HaeIII GGCC 1 cut(s) 2151
HapII CCGG 4 cut(s) 448, 496, 842, 2148
HgaI GACGC 1 cut(s) 156
HhaI GCGC 4 cut(s) 282, 854, 996, 1174
Hin1II CATG 8 cut(s) 9, 507, 887, 971, 1292, 1744, 1961, 1994
Hin6I GCGC 4 cut(s) 280, 852, 994, 1172
HinP1I GCGC 4 cut(s) 280, 852, 994, 1172
HincII GTYRAC 2 cut(s) 1084, 1309
HindII GTYRAC 2 cut(s) 1084, 1309
HpaI GTTAAC 1 cut(s) 1084
HpaII CCGG 4 cut(s) 448, 496, 842, 2148
HphI GGTGA 7 cut(s) 320, 788, 1020, 1069, 2333, 2359, 2372
Hpy166II GTNNAC 6 cut(s) 364, 581, 635, 1084, 1309, 2219
Hpy8I GTNNAC 6 cut(s) 364, 581, 635, 1084, 1309, 2219
Hpy99I CGWCG 1 cut(s) 985
HpyAV CCTTC 9 cut(s) 679, 714, 870, 1102, 1151, 1286, 1322, 1839, 2100
HpyCH4III ACNGT 6 cut(s) 76, 604, 802, 1255, 1555, 2128
HpyCH4IV ACGT 4 cut(s) 38, 983, 1815, 2221
HpyF10VI GCNNNNNNNGC 4 cut(s) 1178, 1927, 2231, 2282
HpyF3I CTNAG 7 cut(s) 257, 480, 585, 681, 1623, 1806, 2235
HpySE526I ACGT 4 cut(s) 38, 983, 1815, 2221
Hsp92II CATG 8 cut(s) 9, 507, 887, 971, 1292, 1744, 1961, 1994
HspAI GCGC 4 cut(s) 280, 852, 994, 1172
Ksp22I TGATCA 4 cut(s) 558, 1285, 1573, 2451
KspAI GTTAAC 1 cut(s) 1084
LmnI GCTCC 6 cut(s) 268, 290, 991, 1940, 2083, 2104
Lsp1109I GCAGC 5 cut(s) 1165, 1180, 1223, 2071, 2347
LweI GCATC 3 cut(s) 302, 940, 1974
MaeI CTAG 7 cut(s) 333, 741, 1182, 1422, 2067, 2378, 2403
MaeII ACGT 4 cut(s) 38, 983, 1815, 2221
MaeIII GTNAC 6 cut(s) 373, 458, 776, 1555, 1663, 2026
MfeI CAATTG 1 cut(s) 1889
MflI RGATCY 1 cut(s) 1298
MhlI GDGCHC 6 cut(s) 265, 366, 637, 1472, 1945, 2278
MlyI GAGTC 6 cut(s) 485, 491, 1660, 1714, 1828, 2047
MmeI TCCRAC 1 cut(s) 1004
MroXI GAANNNNTTC 2 cut(s) 603, 876
MseI TTAA 9 cut(s) 515, 729, 1014, 1038, 1083, 1325, 1436, 1502, 2477
MslI CAYNNNNRTG 1 cut(s) 972
MspA1I CMGCKG 4 cut(s) 287, 623, 2298, 2338
MspCI CTTAAG 3 cut(s) 1013, 1037, 1501
MspI CCGG 4 cut(s) 448, 496, 842, 2148
MspR9I CCNGG 9 cut(s) 153, 449, 497, 639, 1208, 1899, 2148, 2345, 2461
MunI CAATTG 1 cut(s) 1889
Mva1269I GAATGC 1 cut(s) 2382
MvaI CCWGG 6 cut(s) 153, 639, 1208, 1899, 2345, 2461
MwoI GCNNNNNNNGC 4 cut(s) 1178, 1927, 2231, 2282
NciI CCSGG 3 cut(s) 449, 497, 2148
NlaIII CATG 8 cut(s) 9, 507, 887, 971, 1292, 1744, 1961, 1994
NlaIV GGNNCC 5 cut(s) 112, 1598, 1617, 1942, 2100
NmuCI GTSAC 4 cut(s) 458, 776, 1663, 2026
NspI RCATGY 3 cut(s) 887, 1744, 1961
PagI TCATGA 1 cut(s) 1288
PaqCI CACCTGC 1 cut(s) 1670
PciI ACATGT 2 cut(s) 1740, 1957
PctI GAATGC 1 cut(s) 2382
PdmI GAANNNNTTC 2 cut(s) 603, 876
PfeI GAWTC 4 cut(s) 650, 872, 1273, 1636
PflMI CCANNNNNTGG 1 cut(s) 2350
PfoI TCCNGGA 1 cut(s) 1897
PkrI GCNGC 5 cut(s) 1180, 1195, 1213, 2061, 2337
PleI GAGTC 6 cut(s) 484, 490, 1660, 1714, 1828, 2047
PmaCI CACGTG 1 cut(s) 2222
PmlI CACGTG 1 cut(s) 2222
PpsI GAGTC 6 cut(s) 484, 490, 1660, 1714, 1828, 2047
Ppu21I YACGTR 1 cut(s) 2222
PscI ACATGT 2 cut(s) 1740, 1957
PshBI ATTAAT 1 cut(s) 1325
PsiI TTATAA 1 cut(s) 198
Psp124BI GAGCTC 1 cut(s) 265
Psp6I CCWGG 6 cut(s) 151, 637, 1206, 1897, 2343, 2459
PspCI CACGTG 1 cut(s) 2222
PspFI CCCAGC 3 cut(s) 283, 1704, 1879
PspGI CCWGG 6 cut(s) 151, 637, 1206, 1897, 2343, 2459
PspN4I GGNNCC 5 cut(s) 112, 1598, 1617, 1942, 2100
PspPI GGNCC 2 cut(s) 251, 977
PstI CTGCAG 3 cut(s) 85, 109, 2061
PstNI CAGNNNCTG 3 cut(s) 80, 1973, 2350
PsuI RGATCY 1 cut(s) 1298
PvuII CAGCTG 2 cut(s) 287, 2338
RsaI GTAC 7 cut(s) 150, 582, 1344, 1454, 1791, 1998, 2391
RsaNI GTAC 7 cut(s) 149, 581, 1343, 1453, 1790, 1997, 2390
RseI CAYNNNNRTG 1 cut(s) 972
SacI GAGCTC 1 cut(s) 265
SaqAI TTAA 9 cut(s) 515, 729, 1014, 1038, 1083, 1325, 1436, 1502, 2477
SatI GCNGC 5 cut(s) 1179, 1194, 1212, 2060, 2336
Sau96I GGNCC 2 cut(s) 251, 977
SbfI CCTGCAGG 1 cut(s) 109
ScaI AGTACT 1 cut(s) 1344
SchI GAGTC 6 cut(s) 485, 491, 1660, 1714, 1828, 2047
ScrFI CCNGG 9 cut(s) 153, 449, 497, 639, 1208, 1899, 2148, 2345, 2461
SdaI CCTGCAGG 1 cut(s) 109
SduI GDGCHC 6 cut(s) 265, 366, 637, 1472, 1945, 2278
SfaNI GCATC 3 cut(s) 302, 940, 1974
SfcI CTRYAG 7 cut(s) 81, 105, 894, 1129, 1338, 1524, 2057
SinI GGWCC 2 cut(s) 251, 977
SmiMI CAYNNNNRTG 1 cut(s) 972
SmlI CTYRAG 4 cut(s) 1013, 1037, 1501, 2441
SmoI CTYRAG 4 cut(s) 1013, 1037, 1501, 2441
SpeI ACTAGT 1 cut(s) 2402
Sse8387I CCTGCAGG 1 cut(s) 109
SsiI CCGC 6 cut(s) 488, 623, 794, 1235, 2298, 2446
SspI AATATT 2 cut(s) 202, 1243
SspMI CTAG 7 cut(s) 333, 741, 1182, 1422, 2067, 2378, 2403
SstI GAGCTC 1 cut(s) 265
StyD4I CCNGG 9 cut(s) 151, 447, 495, 637, 1206, 1897, 2146, 2343, 2459
StyI CCWWGG 3 cut(s) 45, 1350, 2377
TaaI ACNGT 6 cut(s) 76, 604, 802, 1255, 1555, 2128
TaiI ACGT 4 cut(s) 41, 986, 1818, 2224
TaqI TCGA 3 cut(s) 55, 1832, 2086
TatI WGTACW 1 cut(s) 1342
TfiI GAWTC 4 cut(s) 650, 872, 1273, 1636
Tru1I TTAA 9 cut(s) 515, 729, 1014, 1038, 1083, 1325, 1436, 1502, 2477
Tru9I TTAA 9 cut(s) 515, 729, 1014, 1038, 1083, 1325, 1436, 1502, 2477
TscAI CASTG 4 cut(s) 583, 637, 2355, 2377
TseFI GTSAC 4 cut(s) 458, 776, 1663, 2026
TseI GCWGC 5 cut(s) 1178, 1193, 1211, 2059, 2335
Tsp45I GTSAC 4 cut(s) 458, 776, 1663, 2026
TspDTI ATGAA 9 cut(s) 162, 327, 852, 852, 885, 1128, 1305, 1491, 2208
TspGWI ACGGA 2 cut(s) 1629, 2083
TspRI CASTG 4 cut(s) 583, 637, 2355, 2377
Van91I CCANNNNNTGG 1 cut(s) 2350
Vha464I CTTAAG 3 cut(s) 1013, 1037, 1501
VneI GTGCAC 2 cut(s) 362, 633
VpaK11BI GGWCC 2 cut(s) 251, 977
VspI ATTAAT 1 cut(s) 1325
XagI CCTNNNNNAGG 1 cut(s) 1316
XapI RAATTY 7 cut(s) 121, 192, 407, 782, 1100, 1413, 1852
XceI RCATGY 3 cut(s) 887, 1744, 1961
XcmI CCANNNNNNNNNTGG 1 cut(s) 1101
XmaJI CCTAGG 1 cut(s) 2377
XmnI GAANNNNTTC 2 cut(s) 603, 876
XspI CTAG 7 cut(s) 333, 741, 1182, 1422, 2067, 2378, 2403
ZrmI AGTACT 1 cut(s) 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.