pycom03g09370

Peptidylprolyl isomerase domain and WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0009586
Physical Location & Seq
Forward (+)
7884935 .. 7892009
7075 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1620 bp
ATGGAGGAACCTCAGAACGGAGGAGAAACCCTACCAACATACGCAGAGGAACCCCAGAACGGCAACGCGAACTCGGCCGTGGCGGAGACCGAGGAGGAGCCCATGGTGGGTCCCGGCCCACCCCCACCCCCTCGCGCTCGACCCAAGCGGCCTCTCCAGTTCGAGCACGCCTACCTCGATGCTCTTCCCTCCGCTCAAATGTACGAGAAAAGTTATATGCACCGGGACGTTGTTACGCATGTTGCTGTGTCATCGGCAGATTTTGTTGTAACTGGAAGTGTTGATGGACATTTGAAGTTTTGGAAGAAAAAGGCTATTGGCATTGAATTTGCAAAGCATTTTAGGTCCCACCTTGGTCCAATCGAAGGCTTAGCTGTTAGTGTTGATGGTTTGCTTTGCTGTACAATTTCAAATGACAAATCTGTGAAGATATATGACGTAGTCAACTATGATATGATGGTCATGATTCGCACAGAGTTTGTTCCTGGTGCTGTTGAGTGGGTCTACAAACAAGGGGATGTCAAAGCCAGGCTTGCCATCAGTGACAGGGACTCATCATATGTACACATTTTTGATGCACGATCTGGTACAAATGAACCTATTATCTTCAGAGAGGTACATTTGGGCCCAGTGAAAGTTATGAGGTATAATCCTGTATTTGATACAGTGATTTCAGCTGATCAACAGGGAATGGTTGAGTATTGGAGTCCTGACACCCTTAAGTTTCCAGAGACTGGGGTGAAATTCAGAATGAAAAGTGATACTAATCTGTTTGAAATCCCGAAATGCAAAACTACCGTTTCTTCTATCGAGGTTAGCCCAGATGGTAAGCAATTTTCGATTACTTCGCCCGATCGCAGGATACGTGTATTTTGGTTTAGCACAGGCAAACTACGACGAGTTTATGATGAATCTCTTGAGGTGGCCCAAGATCTCCAGAGAAGTGATGTGCCTTTGTACCAGCTGGAAGCCATTGACTTTGGGCGAAGAATGGCTGTTGAGAGGGAAATTGAGAAAACAGAATCTGCCCCACAGCCGAATGCAGTTTTTGATGAAAGCTCAAATTTTCTCATCTATGCAACTCTCCTTGGAATAAAAGTGGTAAATTTACACACTAATAAAGTTTCTCGAATTCTCGGAAAAGTGGAGAATAATGATAGGTTTTTGAGAATTGCCTTATACCAAGGTGACAAAAGCAGTAAAAAAGTTAGAAAAATCCCTGCTGCTGCAGCAAATGTTAATGAAAGCAAAGAGCCTTTGACAGATCCTACTCTCATATGTTGTGCTTTCAAAAAACACAGAATCTATCTATTCAGTCAGAGAGAACCAGAGGAGCCTGAAGATGCAACTAAGGGAAGAGATATATTCAACGAAAAGCCTCCTGCTGATGAACTCTTGGCTGCATCAGAGATTGGTAAATCATCCTCAACATCTCTTCCTGACAATGTGATTTTGCGTACTACAATGGGTGACATACACATGAAACTGTATCCAGAGGAATGTCCAAAAACTGTGGAGAACTTCACAACACACTGCCGAAATGGCTATTATTATAACCTCATATTTCATCGAGTCATCAAAGGTTTCATGATACAAACGGGATCGATCGATCATCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000413 GO:0003002 GO:0003006 GO:0003674 GO:0003682 GO:0003755 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009933 GO:0009965 GO:0009987 GO:0010015 GO:0010016 GO:0010051 GO:0010073 GO:0010075 GO:0010082 GO:0010305 GO:0010338 GO:0010358 GO:0016018 GO:0016604 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031056 GO:0031060 GO:0031323 GO:0031399 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033218 GO:0036211 GO:0040008 GO:0042277 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048442 GO:0048443 GO:0048444 GO:0048447 GO:0048449 GO:0048453 GO:0048464 GO:0048466 GO:0048467 GO:0048507 GO:0048509 GO:0048532 GO:0048580 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902275 GO:1902494 GO:1905392 GO:1905393 GO:1990904 GO:2000026 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase WD40

Protein Analysis

540

Amino Acids

60.85

Weight (kDa)

6.11

Isoelectric Point (pI)

45.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_Prp19 PF24814 65 - 234 9.7e-09 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 73 - 240 1.8e-09 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 74 - 303 1.7e-13 THOC3 beta-propeller domain
WDR55 PF24796 79 - 235 2.3e-06 WDR55
Pro_isomerase PF00160 484 - 536 1.1e-17 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1554
AccB7I CCANNNNNTGG 1 cut(s) 734
AccBSI CCGCTC 1 cut(s) 194
AccI GTMKAC 1 cut(s) 504
AccII CGCG 2 cut(s) 68, 135
AciI CCGC 3 cut(s) 83, 148, 192
AclWI GGATC 2 cut(s) 1259, 1609
AcoI YGGCCR 1 cut(s) 75
AcsI RAATTY 5 cut(s) 326, 743, 1063, 1105, 1131
AcuI CTGAAG 2 cut(s) 592, 1359
AfaI GTAC 7 cut(s) 203, 403, 564, 589, 618, 959, 1459
AfiI CCNNNNNNNGG 6 cut(s) 17, 59, 107, 365, 734, 858
AflII CTTAAG 1 cut(s) 719
AflIII ACRYGT 1 cut(s) 865
AgsI TTSAA 6 cut(s) 295, 326, 411, 776, 1291, 1369
AjnI CCWGG 2 cut(s) 484, 527
AluBI AGCT 4 cut(s) 374, 677, 964, 1059
AluI AGCT 4 cut(s) 374, 677, 964, 1059
Alw21I GWGCWC 1 cut(s) 168
Alw26I GTCTC 2 cut(s) 80, 725
AlwI GGATC 2 cut(s) 1259, 1609
AlwNI CAGNNNCTG 2 cut(s) 734, 1025
AoxI GGCC 5 cut(s) 75, 115, 149, 625, 924
ApaI GGGCCC 1 cut(s) 629
ApeKI GCWGC 4 cut(s) 1223, 1226, 1229, 1400
ApoI RAATTY 5 cut(s) 326, 743, 1063, 1105, 1131
AspLEI GCGC 1 cut(s) 137
AspS9I GGNCC 7 cut(s) 110, 116, 345, 356, 625, 626, 925
AsuC2I CCSGG 2 cut(s) 114, 224
AsuHPI GGTGA 3 cut(s) 751, 1199, 1481
AvaII GGWCC 3 cut(s) 110, 345, 356
BaeGI GKGCMC 1 cut(s) 629
BanII GRGCYC 2 cut(s) 102, 629
Bbv12I GWGCWC 1 cut(s) 168
BbvI GCAGC 4 cut(s) 1210, 1213, 1241, 1387
BccI CCATC 5 cut(s) 278, 380, 451, 545, 818
BceAI ACGGC 2 cut(s) 62, 76
BciT130I CCWGG 2 cut(s) 486, 529
BciVI GTATCC 2 cut(s) 855, 1500
BclI TGATCA 1 cut(s) 679
BcnI CCSGG 2 cut(s) 114, 224
BcoDI GTCTC 2 cut(s) 80, 725
BfmI CTRYAG 1 cut(s) 1227
BfrI CTTAAG 1 cut(s) 719
BfuI GTATCC 2 cut(s) 855, 1500
BglI GCCNNNNNGGC 1 cut(s) 1542
BglII AGATCT 1 cut(s) 931
BisI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
BlpI GCTNAGC 1 cut(s) 370
BlsI GCNGC 5 cut(s) 150, 1225, 1228, 1231, 1402
Bme1390I CCNGG 4 cut(s) 114, 224, 486, 529
Bme18I GGWCC 3 cut(s) 110, 345, 356
BmgT120I GGNCC 7 cut(s) 110, 116, 345, 356, 625, 626, 925
BmiI GGNNCC 8 cut(s) 9, 51, 99, 111, 112, 347, 627, 1335
BmrFI CCNGG 4 cut(s) 114, 224, 486, 529
BmrI ACTGGG 2 cut(s) 623, 744
BmsI GCATC 4 cut(s) 169, 565, 1333, 1412
BmuI ACTGGG 2 cut(s) 623, 744
BpmI CTGGAG 2 cut(s) 140, 920
Bpu1102I GCTNAGC 1 cut(s) 370
BpuEI CTTGAG 1 cut(s) 938
BpuMI CCSGG 2 cut(s) 114, 224
Bsa29I ATCGAT 2 cut(s) 1604, 1608
BsaAI YACGTR 1 cut(s) 866
BsaBI GATNNNNATC 1 cut(s) 765
BsaI GGTCTC 1 cut(s) 80
BsaJI CCNNGG 6 cut(s) 78, 90, 102, 352, 1087, 1183
Bsc4I CCNNNNNNNGG 6 cut(s) 17, 59, 107, 365, 734, 858
Bse1I ACTGG 4 cut(s) 157, 277, 629, 739
Bse8I GATNNNNATC 1 cut(s) 765
BseBI CCWGG 2 cut(s) 486, 529
BseCI ATCGAT 2 cut(s) 1604, 1608
BseDI CCNNGG 6 cut(s) 78, 90, 102, 352, 1087, 1183
BseGI GGATG 2 cut(s) 523, 1421
BseJI GATNNNNATC 1 cut(s) 765
BseLI CCNNNNNNNGG 6 cut(s) 17, 59, 107, 365, 734, 858
BseMII CTCAG 1 cut(s) 26
BseNI ACTGG 4 cut(s) 157, 277, 629, 739
BseRI GAGGAG 4 cut(s) 36, 107, 110, 1346
BseSI GKGCMC 1 cut(s) 629
BseX3I CGGCCG 1 cut(s) 75
BseXI GCAGC 4 cut(s) 1210, 1213, 1241, 1387
Bsh1236I CGCG 2 cut(s) 68, 135
Bsh1285I CGRYCG 3 cut(s) 78, 856, 1608
BshFI GGCC 5 cut(s) 77, 117, 151, 627, 926
BshVI ATCGAT 2 cut(s) 1604, 1608
BsiEI CGRYCG 3 cut(s) 78, 856, 1608
BsiHKAI GWGCWC 1 cut(s) 168
BsiSI CCGG 2 cut(s) 114, 223
BslFI GGGAC 4 cut(s) 96, 239, 331, 563
BslI CCNNNNNNNGG 6 cut(s) 17, 59, 107, 365, 734, 858
BsmAI GTCTC 2 cut(s) 80, 725
BsmFI GGGAC 4 cut(s) 96, 239, 331, 563
BsmI GAATGC 1 cut(s) 1045
BsnI GGCC 5 cut(s) 77, 117, 151, 627, 926
Bso31I GGTCTC 1 cut(s) 80
Bsp120I GGGCCC 1 cut(s) 625
Bsp1286I GDGCHC 3 cut(s) 102, 168, 629
Bsp1407I TGTACA 2 cut(s) 401, 562
Bsp143I GATC 8 cut(s) 581, 679, 853, 931, 1264, 1601, 1605, 1609
Bsp1720I GCTNAGC 1 cut(s) 370
Bsp19I CCATGG 1 cut(s) 102
BspACI CCGC 3 cut(s) 83, 148, 192
BspANI GGCC 5 cut(s) 77, 117, 151, 627, 926
BspCNI CTCAG 1 cut(s) 25
BspDI ATCGAT 2 cut(s) 1604, 1608
BspFNI CGCG 2 cut(s) 68, 135
BspHI TCATGA 2 cut(s) 462, 1587
BspLI GGNNCC 8 cut(s) 9, 51, 99, 111, 112, 347, 627, 1335
BspMAI CTGCAG 1 cut(s) 1231
BspPI GGATC 2 cut(s) 1259, 1609
BspQI GCTCTTC 1 cut(s) 189
BspTI CTTAAG 1 cut(s) 719
BspTNI GGTCTC 1 cut(s) 80
BsrBI CCGCTC 1 cut(s) 194
BsrGI TGTACA 2 cut(s) 401, 562
BsrI ACTGG 4 cut(s) 157, 277, 629, 739
BssECI CCNNGG 6 cut(s) 78, 90, 102, 352, 1087, 1183
BssMI GATC 8 cut(s) 581, 679, 853, 931, 1264, 1601, 1605, 1609
BssT1I CCWWGG 4 cut(s) 102, 352, 1087, 1183
Bst2UI CCWGG 2 cut(s) 486, 529
Bst4CI ACNGT 4 cut(s) 667, 799, 1488, 1513
Bst6I CTCTTC 3 cut(s) 189, 1351, 1440
BstAFI CTTAAG 1 cut(s) 719
BstAUI TGTACA 2 cut(s) 401, 562
BstBAI YACGTR 1 cut(s) 866
BstC8I GCNNGC 2 cut(s) 168, 534
BstDEI CTNAG 3 cut(s) 12, 370, 1350
BstDSI CCRYGG 2 cut(s) 78, 102
BstF5I GGATG 2 cut(s) 523, 1421
BstFNI CGCG 2 cut(s) 68, 135
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 8 cut(s) 584, 682, 856, 934, 1267, 1604, 1608, 1612
BstMAI GTCTC 2 cut(s) 80, 725
BstMBI GATC 8 cut(s) 581, 679, 853, 931, 1264, 1601, 1605, 1609
BstMCI CGRYCG 3 cut(s) 78, 856, 1608
BstMWI GCNNNNNNNGC 4 cut(s) 74, 533, 1229, 1542
BstNI CCWGG 2 cut(s) 486, 529
BstNSI RCATGY 1 cut(s) 242
BstSCI CCNGG 4 cut(s) 112, 222, 484, 527
BstSFI CTRYAG 1 cut(s) 1227
BstSLI GKGCMC 1 cut(s) 629
BstUI CGCG 2 cut(s) 68, 135
BstV1I GCAGC 4 cut(s) 1210, 1213, 1241, 1387
BstX2I RGATCY 2 cut(s) 931, 1264
BstYI RGATCY 2 cut(s) 931, 1264
BstZI CGGCCG 1 cut(s) 75
Bsu15I ATCGAT 2 cut(s) 1604, 1608
BsuI GTATCC 2 cut(s) 855, 1500
BsuRI GGCC 5 cut(s) 77, 117, 151, 627, 926
BsuTUI ATCGAT 2 cut(s) 1604, 1608
BtgI CCRYGG 2 cut(s) 78, 102
BtsCI GGATG 2 cut(s) 523, 1421
BtsI GCAGTG 1 cut(s) 1531
BtsIMutI CAGTG 4 cut(s) 547, 636, 672, 1531
Cac8I GCNNGC 2 cut(s) 168, 534
CaiI CAGNNNCTG 2 cut(s) 734, 1025
CciI TCATGA 2 cut(s) 462, 1587
CfoI GCGC 1 cut(s) 137
Cfr13I GGNCC 7 cut(s) 110, 116, 345, 356, 625, 626, 925
ClaI ATCGAT 2 cut(s) 1604, 1608
Csp6I GTAC 7 cut(s) 202, 402, 563, 588, 617, 958, 1458
CspCI CAANNNNNGTGG 2 cut(s) 1494, 1529
CviAII CATG 5 cut(s) 103, 239, 463, 1480, 1588
CviQI GTAC 7 cut(s) 202, 402, 563, 588, 617, 958, 1458
DdeI CTNAG 3 cut(s) 12, 370, 1350
DpnI GATC 8 cut(s) 583, 681, 855, 933, 1266, 1603, 1607, 1611
DpnII GATC 8 cut(s) 581, 679, 853, 931, 1264, 1601, 1605, 1609
EaeI YGGCCR 1 cut(s) 75
EagI CGGCCG 1 cut(s) 75
Eam1104I CTCTTC 3 cut(s) 189, 1351, 1440
EarI CTCTTC 3 cut(s) 189, 1351, 1440
EciI GGCGGA 1 cut(s) 98
EclXI CGGCCG 1 cut(s) 75
Eco130I CCWWGG 4 cut(s) 102, 352, 1087, 1183
Eco24I GRGCYC 2 cut(s) 102, 629
Eco31I GGTCTC 1 cut(s) 80
Eco47I GGWCC 3 cut(s) 110, 345, 356
Eco52I CGGCCG 1 cut(s) 75
Eco57I CTGAAG 2 cut(s) 592, 1359
EcoO109I RGGNCCY 2 cut(s) 110, 345
EcoRI GAATTC 1 cut(s) 1131
EcoRII CCWGG 2 cut(s) 484, 527
EcoT14I CCWWGG 4 cut(s) 102, 352, 1087, 1183
EcoT38I GRGCYC 2 cut(s) 102, 629
ErhI CCWWGG 4 cut(s) 102, 352, 1087, 1183
FaeI CATG 5 cut(s) 106, 242, 466, 1483, 1591
FalI AAGNNNNNCTT 2 cut(s) 516, 548
FaqI GGGAC 4 cut(s) 96, 239, 331, 563
FatI CATG 5 cut(s) 102, 238, 462, 1479, 1587
FauNDI CATATG 2 cut(s) 559, 1277
FbaI TGATCA 1 cut(s) 679
FblI GTMKAC 1 cut(s) 504
Fnu4HI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
FokI GGATG 2 cut(s) 530, 1408
FriOI GRGCYC 2 cut(s) 102, 629
Fsp4HI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
GlaI GCGC 1 cut(s) 136
GluI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
GsuI CTGGAG 2 cut(s) 140, 920
HaeIII GGCC 5 cut(s) 77, 117, 151, 627, 926
HapII CCGG 2 cut(s) 114, 223
HhaI GCGC 1 cut(s) 137
Hin1II CATG 5 cut(s) 106, 242, 466, 1483, 1591
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HinfI GANTC 7 cut(s) 466, 551, 706, 911, 1022, 1302, 1572
HpaII CCGG 2 cut(s) 114, 223
HphI GGTGA 3 cut(s) 751, 1199, 1481
Hpy166II GTNNAC 3 cut(s) 445, 505, 565
Hpy188I TCNGA 6 cut(s) 15, 611, 749, 1139, 1320, 1408
Hpy8I GTNNAC 3 cut(s) 445, 505, 565
Hpy99I CGWCG 1 cut(s) 900
HpyAV CCTTC 1 cut(s) 359
HpyCH4III ACNGT 4 cut(s) 667, 799, 1488, 1513
HpyCH4IV ACGT 3 cut(s) 228, 438, 865
HpyCH4V TGCA 9 cut(s) 220, 332, 578, 789, 1043, 1079, 1229, 1346, 1403
HpyF10VI GCNNNNNNNGC 4 cut(s) 74, 533, 1229, 1542
HpyF3I CTNAG 3 cut(s) 12, 370, 1350
HpySE526I ACGT 3 cut(s) 228, 438, 865
Hsp92II CATG 5 cut(s) 106, 242, 466, 1483, 1591
HspAI GCGC 1 cut(s) 135
KflI GGGWCCC 1 cut(s) 110
Ksp22I TGATCA 1 cut(s) 679
Kzo9I GATC 8 cut(s) 581, 679, 853, 931, 1264, 1601, 1605, 1609
LguI GCTCTTC 1 cut(s) 189
LmnI GCTCC 2 cut(s) 97, 1333
Lsp1109I GCAGC 4 cut(s) 1210, 1213, 1241, 1387
LweI GCATC 4 cut(s) 169, 565, 1333, 1412
MaeII ACGT 3 cut(s) 228, 438, 865
MaeIII GTNAC 5 cut(s) 232, 268, 542, 1187, 1469
MalI GATC 8 cut(s) 583, 681, 855, 933, 1266, 1603, 1607, 1611
MbiI CCGCTC 1 cut(s) 194
MboI GATC 8 cut(s) 581, 679, 853, 931, 1264, 1601, 1605, 1609
MboII GAAGA 9 cut(s) 176, 316, 439, 598, 795, 999, 1352, 1368, 1427
MflI RGATCY 2 cut(s) 931, 1264
MhlI GDGCHC 3 cut(s) 102, 168, 629
MluCI AATT 9 cut(s) 326, 405, 743, 833, 1008, 1063, 1105, 1131, 1170
MlyI GAGTC 3 cut(s) 545, 715, 1581
MseI TTAA 2 cut(s) 720, 1239
MslI CAYNNNNRTG 1 cut(s) 1478
MspA1I CMGCKG 2 cut(s) 677, 964
MspCI CTTAAG 1 cut(s) 719
MspI CCGG 2 cut(s) 114, 223
MspR9I CCNGG 4 cut(s) 114, 224, 486, 529
Mva1269I GAATGC 1 cut(s) 1045
MvaI CCWGG 2 cut(s) 486, 529
MvnI CGCG 2 cut(s) 68, 135
MwoI GCNNNNNNNGC 4 cut(s) 74, 533, 1229, 1542
NciI CCSGG 2 cut(s) 114, 224
NcoI CCATGG 1 cut(s) 102
NdeI CATATG 2 cut(s) 559, 1277
NdeII GATC 8 cut(s) 581, 679, 853, 931, 1264, 1601, 1605, 1609
NlaIII CATG 5 cut(s) 106, 242, 466, 1483, 1591
NlaIV GGNNCC 8 cut(s) 9, 51, 99, 111, 112, 347, 627, 1335
NmeAIII GCCGAG 1 cut(s) 53
NmuCI GTSAC 3 cut(s) 542, 1187, 1469
NspI RCATGY 1 cut(s) 242
PagI TCATGA 2 cut(s) 462, 1587
PciSI GCTCTTC 1 cut(s) 189
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 862
PctI GAATGC 1 cut(s) 1045
PfeI GAWTC 4 cut(s) 466, 911, 1022, 1302
PflFI GACNNNGTC 1 cut(s) 440
PflMI CCANNNNNTGG 1 cut(s) 734
PkrI GCNGC 5 cut(s) 150, 1225, 1228, 1231, 1402
Ple19I CGATCG 2 cut(s) 856, 1608
PleI GAGTC 3 cut(s) 545, 714, 1580
PpsI GAGTC 3 cut(s) 545, 714, 1580
Ppu21I YACGTR 1 cut(s) 866
PpuMI RGGWCCY 2 cut(s) 110, 345
PsiI TTATAA 1 cut(s) 1554
Psp5II RGGWCCY 2 cut(s) 110, 345
Psp6I CCWGG 2 cut(s) 484, 527
PspGI CCWGG 2 cut(s) 484, 527
PspN4I GGNNCC 8 cut(s) 9, 51, 99, 111, 112, 347, 627, 1335
PspOMI GGGCCC 1 cut(s) 625
PspPI GGNCC 7 cut(s) 110, 116, 345, 356, 625, 626, 925
PspPPI RGGWCCY 2 cut(s) 110, 345
PstI CTGCAG 1 cut(s) 1231
PstNI CAGNNNCTG 2 cut(s) 734, 1025
PsuI RGATCY 2 cut(s) 931, 1264
PsyI GACNNNGTC 1 cut(s) 440
PvuI CGATCG 2 cut(s) 856, 1608
PvuII CAGCTG 2 cut(s) 677, 964
RsaI GTAC 7 cut(s) 203, 403, 564, 589, 618, 959, 1459
RsaNI GTAC 7 cut(s) 202, 402, 563, 588, 617, 958, 1458
RseI CAYNNNNRTG 1 cut(s) 1478
SapI GCTCTTC 1 cut(s) 189
SaqAI TTAA 2 cut(s) 720, 1239
SatI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
Sau3AI GATC 8 cut(s) 581, 679, 853, 931, 1264, 1601, 1605, 1609
Sau96I GGNCC 7 cut(s) 110, 116, 345, 356, 625, 626, 925
SchI GAGTC 3 cut(s) 545, 715, 1581
ScrFI CCNGG 4 cut(s) 114, 224, 486, 529
SduI GDGCHC 3 cut(s) 102, 168, 629
SfaNI GCATC 4 cut(s) 169, 565, 1333, 1412
SfcI CTRYAG 1 cut(s) 1227
SinI GGWCC 3 cut(s) 110, 345, 356
SmiMI CAYNNNNRTG 1 cut(s) 1478
SmlI CTYRAG 2 cut(s) 719, 917
SmoI CTYRAG 2 cut(s) 719, 917
Sse9I AATT 9 cut(s) 326, 405, 743, 833, 1008, 1063, 1105, 1131, 1170
SsiI CCGC 3 cut(s) 83, 148, 192
StyD4I CCNGG 4 cut(s) 112, 222, 484, 527
StyI CCWWGG 4 cut(s) 102, 352, 1087, 1183
TaaI ACNGT 4 cut(s) 667, 799, 1488, 1513
TaiI ACGT 3 cut(s) 231, 441, 868
TaqII GACCGA 1 cut(s) 104
TasI AATT 9 cut(s) 326, 405, 743, 833, 1008, 1063, 1105, 1131, 1170
TatI WGTACW 2 cut(s) 401, 562
TauI GCSGC 1 cut(s) 151
TfiI GAWTC 4 cut(s) 466, 911, 1022, 1302
Tru1I TTAA 2 cut(s) 720, 1239
Tru9I TTAA 2 cut(s) 720, 1239
TscAI CASTG 4 cut(s) 547, 636, 672, 1538
TseFI GTSAC 3 cut(s) 542, 1187, 1469
TseI GCWGC 4 cut(s) 1223, 1226, 1229, 1400
Tsp45I GTSAC 3 cut(s) 542, 1187, 1469
TspDTI ATGAA 9 cut(s) 609, 767, 924, 1068, 1257, 1404, 1496, 1556, 1576
TspGWI ACGGA 1 cut(s) 33
TspRI CASTG 4 cut(s) 547, 636, 672, 1538
Tth111I GACNNNGTC 1 cut(s) 440
Van91I CCANNNNNTGG 1 cut(s) 734
Vha464I CTTAAG 1 cut(s) 719
VpaK11BI GGWCC 3 cut(s) 110, 345, 356
XapI RAATTY 5 cut(s) 326, 743, 1063, 1105, 1131
XceI RCATGY 1 cut(s) 242
XmiI GTMKAC 1 cut(s) 504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.