pycom03g12950

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
13871990 .. 13874019
2030 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g12950.2

Sequence Viewer

Length: 1281 bp
ATGAGCATGAATTTTACAGTAGCTGGAGTTCCATGTCCGAGTCGAAGAAACCCTTCCGATCACTTTCTTCGTTGCATTAATTCGGACTTCGACAGAGTCACCATGAACGAATCTCACCGAATACGTGACGTCCCAAAATCATCAGATCCTTTACTGAACTTAGCAACAGCAGAGATAAAAGCTATGCTTGTCGAGAAGTACAAGAGTTCCGAGTATGCGTCGAGGACAAGAGCTAGGATTCGACAAGTTTCATCGATGGAAGGACTGACGGTAGAAAAATGGAGTGGGAGCCAAGCAACCTGGTGGAAGCAACTAACAATATTAACACGGAGATCTTTCCTGAACATGTTAAGGGACTTGGGGTATTACTGGGTAAGAATCATCATTTACGTGCTGTTATCTCTGTGTGTCGGTACGATATTCTTCAATCTTGGGACAAATCTGAATTCAATATTGGCAAGAGGAGCTTGTGCTGGATTTATTTCTGGCTTCATGACTTTCCTGTCCATCGGAGGGTTCCCATCCTTCCTTGAAGAAATGAAGGTTTTTCATAAAGAAAGGCTCAACGGGCATTATGGTGTTGCTGTGTTTATTCTGTCGAATTTCCTCTCTTCTTTCCCGTTCTTGGCTGTCATGTCGATTTCAACTGCGAGTATAACATACTACATGGTGGAATTCCATTCTCAGTTTCCTCGTTTTGTATTCATGTGCCTCGATCTTATCAGCGCCATCGCAGCAGTAGAGAGCTCCATGATGATTATAGCATCTCTTGTTCCTAACTACTTGATGGGAGTGATAATTGGAGCAGGATACTTGGGAATCATGATGATGACTGCCGGATTCTTCCGCTTGCCGCCTGACATTCCCAGACCGGTTTGGCGATATCCTGTTTCATACCTAAATTATGGTGCATGGGCATTACAGGGAGAATATAAGAACGCACTGGTTGGCCGTGAATTTGATCCTATTGTACCAAATGGCCCGAAGCTGAAAGGCGAGTATATCCTCACAAACATTGCCGGCTTTAAACTGGATCACTCAAAGTGGTGGGACTTGGCTGCTGTTGTAGCCCTTCTTGTGTCTTTTAGAATCATCTTCTTCATCATCCTTAAGTTCAAAGAGAGAGCTTCGCCTTACTTCCAAACATATTATGCCAAGCATACTCTAAAGCATCTCAAGAAGCGGCCTTCATTCAGGAAGGAGATACCATTCCCTTCCAAGAGGCACCAACCTCTCCATCCCCTGGCTTTTCAAGAGGGTCTCAACTCTCCACTGCACTAG

Protein Analysis

427

Amino Acids

48.61

Weight (kDa)

9.73

Isoelectric Point (pI)

39.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 502
AatII GACGTC 1 cut(s) 132
AccB1I GGYRCC 1 cut(s) 1224
AccB7I CCANNNNNTGG 1 cut(s) 1243
AciI CCGC 3 cut(s) 847, 854, 1183
AclWI GGATC 3 cut(s) 140, 956, 1041
AcoI YGGCCR 1 cut(s) 949
AcsI RAATTY 5 cut(s) 10, 445, 601, 674, 956
AcyI GRCGYC 1 cut(s) 129
AfaI GTAC 3 cut(s) 200, 415, 972
AfiI CCNNNNNNNGG 3 cut(s) 513, 625, 1243
AflII CTTAAG 1 cut(s) 1109
AflIII ACRYGT 1 cut(s) 345
AgeI ACCGGT 1 cut(s) 871
AgsI TTSAA 6 cut(s) 427, 450, 533, 645, 1117, 1253
AjnI CCWGG 2 cut(s) 299, 1242
AjuI GAANNNNNNNTTGG 2 cut(s) 437, 469
AluBI AGCT 7 cut(s) 23, 182, 233, 467, 747, 988, 1127
AluI AGCT 7 cut(s) 23, 182, 233, 467, 747, 988, 1127
Alw21I GWGCWC 1 cut(s) 749
Alw26I GTCTC 1 cut(s) 1265
AlwI GGATC 3 cut(s) 140, 956, 1041
AlwNI CAGNNNCTG 1 cut(s) 23
AoxI GGCC 3 cut(s) 949, 979, 1184
ApeKI GCWGC 2 cut(s) 734, 1058
ApoI RAATTY 5 cut(s) 10, 445, 601, 674, 956
AseI ATTAAT 1 cut(s) 78
AsiGI ACCGGT 1 cut(s) 871
Asp700I GAANNNNTTC 1 cut(s) 52
AspLEI GCGC 1 cut(s) 728
AspS9I GGNCC 1 cut(s) 980
AsuHPI GGTGA 2 cut(s) 91, 107
BanI GGYRCC 1 cut(s) 1224
BanII GRGCYC 1 cut(s) 749
Bbv12I GWGCWC 1 cut(s) 749
BbvI GCAGC 2 cut(s) 746, 1045
BccI CCATC 6 cut(s) 250, 515, 529, 737, 781, 1245
BceAI ACGGC 1 cut(s) 936
BciT130I CCWGG 2 cut(s) 301, 1244
BciVI GTATCC 1 cut(s) 803
BcoDI GTCTC 1 cut(s) 1265
BfaI CTAG 2 cut(s) 234, 1279
BfoI RGCGCY 1 cut(s) 729
BfrI CTTAAG 1 cut(s) 1109
BfuI GTATCC 1 cut(s) 803
BglII AGATCT 1 cut(s) 332
BisI GCNGC 4 cut(s) 735, 854, 1059, 1184
BlsI GCNGC 4 cut(s) 736, 855, 1060, 1185
Bme1390I CCNGG 2 cut(s) 301, 1244
BmgT120I GGNCC 1 cut(s) 980
BmiI GGNNCC 3 cut(s) 290, 518, 1226
BmrFI CCNGG 2 cut(s) 301, 1244
BmrI ACTGGG 1 cut(s) 379
BmsI GCATC 2 cut(s) 773, 1180
BmuI ACTGGG 1 cut(s) 379
BpmI CTGGAG 1 cut(s) 45
BpuEI CTTGAG 1 cut(s) 1160
Bsa29I ATCGAT 1 cut(s) 254
BsaAI YACGTR 2 cut(s) 125, 391
BsaHI GRCGYC 1 cut(s) 129
BsaI GGTCTC 1 cut(s) 1265
BsaJI CCNNGG 1 cut(s) 1242
BsaWI WCCGGW 1 cut(s) 871
Bsc4I CCNNNNNNNGG 3 cut(s) 513, 625, 1243
Bse118I RCCGGY 2 cut(s) 871, 1019
Bse1I ACTGG 3 cut(s) 374, 948, 1035
Bse3DI GCAATG 1 cut(s) 1014
BseBI CCWGG 2 cut(s) 301, 1244
BseCI ATCGAT 1 cut(s) 254
BseDI CCNNGG 1 cut(s) 1242
BseGI GGATG 3 cut(s) 521, 1104, 1237
BseLI CCNNNNNNNGG 3 cut(s) 513, 625, 1243
BseMI GCAATG 1 cut(s) 1014
BseMII CTCAG 1 cut(s) 698
BseNI ACTGG 3 cut(s) 374, 948, 1035
BseRI GAGGAG 1 cut(s) 477
BseXI GCAGC 2 cut(s) 746, 1045
BsgI GTGCAG 1 cut(s) 1259
BshFI GGCC 3 cut(s) 951, 981, 1186
BshNI GGYRCC 1 cut(s) 1224
BshTI ACCGGT 1 cut(s) 871
BshVI ATCGAT 1 cut(s) 254
BsiHKAI GWGCWC 1 cut(s) 749
BsiSI CCGG 3 cut(s) 837, 872, 1020
BslFI GGGAC 4 cut(s) 116, 368, 448, 1064
BslI CCNNNNNNNGG 3 cut(s) 513, 625, 1243
BsmAI GTCTC 1 cut(s) 1265
BsmFI GGGAC 4 cut(s) 116, 368, 448, 1064
BsnI GGCC 3 cut(s) 951, 981, 1186
Bso31I GGTCTC 1 cut(s) 1265
Bsp1286I GDGCHC 1 cut(s) 749
Bsp143I GATC 6 cut(s) 58, 145, 332, 715, 961, 1033
BspACI CCGC 3 cut(s) 847, 854, 1183
BspANI GGCC 3 cut(s) 951, 981, 1186
BspCNI CTCAG 1 cut(s) 697
BspDI ATCGAT 1 cut(s) 254
BspHI TCATGA 2 cut(s) 492, 822
BspLI GGNNCC 3 cut(s) 290, 518, 1226
BspPI GGATC 3 cut(s) 140, 956, 1041
BspT107I GGYRCC 1 cut(s) 1224
BspTI CTTAAG 1 cut(s) 1109
BspTNI GGTCTC 1 cut(s) 1265
BsrDI GCAATG 1 cut(s) 1014
BsrFI RCCGGY 2 cut(s) 871, 1019
BsrI ACTGG 3 cut(s) 374, 948, 1035
BssAI RCCGGY 2 cut(s) 871, 1019
BssECI CCNNGG 1 cut(s) 1242
BssMI GATC 6 cut(s) 58, 145, 332, 715, 961, 1033
BssNI GRCGYC 1 cut(s) 129
Bst2UI CCWGG 2 cut(s) 301, 1244
Bst4CI ACNGT 2 cut(s) 19, 271
Bst6I CTCTTC 1 cut(s) 616
BstACI GRCGYC 1 cut(s) 129
BstAFI CTTAAG 1 cut(s) 1109
BstBAI YACGTR 2 cut(s) 125, 391
BstC8I GCNNGC 2 cut(s) 851, 1021
BstDEI CTNAG 2 cut(s) 160, 684
BstF5I GGATG 3 cut(s) 521, 1104, 1237
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 1 cut(s) 728
BstKTI GATC 6 cut(s) 61, 148, 335, 718, 964, 1036
BstMAI GTCTC 1 cut(s) 1265
BstMBI GATC 6 cut(s) 58, 145, 332, 715, 961, 1033
BstMWI GCNNNNNNNGC 4 cut(s) 464, 568, 734, 1067
BstNI CCWGG 2 cut(s) 301, 1244
BstNSI RCATGY 1 cut(s) 349
BstSCI CCNGG 2 cut(s) 299, 1242
BstV1I GCAGC 2 cut(s) 746, 1045
BstX2I RGATCY 2 cut(s) 145, 332
BstYI RGATCY 2 cut(s) 145, 332
Bsu15I ATCGAT 1 cut(s) 254
BsuI GTATCC 1 cut(s) 803
BsuRI GGCC 3 cut(s) 951, 981, 1186
BsuTUI ATCGAT 1 cut(s) 254
BtgZI GCGATG 1 cut(s) 715
BtsCI GGATG 3 cut(s) 521, 1104, 1237
BtsI GCAGTG 1 cut(s) 1271
BtsIMutI CAGTG 2 cut(s) 941, 1271
Cac8I GCNNGC 2 cut(s) 851, 1021
CaiI CAGNNNCTG 1 cut(s) 23
CciI TCATGA 2 cut(s) 492, 822
CfoI GCGC 1 cut(s) 728
Cfr10I RCCGGY 2 cut(s) 871, 1019
Cfr13I GGNCC 1 cut(s) 980
ClaI ATCGAT 1 cut(s) 254
CseI GACGC 1 cut(s) 207
CsiI ACCWGGT 1 cut(s) 299
Csp6I GTAC 3 cut(s) 199, 414, 971
CspAI ACCGGT 1 cut(s) 871
CviQI GTAC 3 cut(s) 199, 414, 971
DdeI CTNAG 2 cut(s) 160, 684
DpnI GATC 6 cut(s) 60, 147, 334, 717, 963, 1035
DpnII GATC 6 cut(s) 58, 145, 332, 715, 961, 1033
DraI TTTAAA 1 cut(s) 1027
DrdI GACNNNNNNGTC 1 cut(s) 502
DseDI GACNNNNNNGTC 1 cut(s) 502
EaeI YGGCCR 1 cut(s) 949
Eam1104I CTCTTC 1 cut(s) 616
EarI CTCTTC 1 cut(s) 616
Ecl136II GAGCTC 1 cut(s) 747
Eco24I GRGCYC 1 cut(s) 749
Eco31I GGTCTC 1 cut(s) 1265
Eco32I GATATC 1 cut(s) 884
Eco53kI GAGCTC 1 cut(s) 747
EcoICRI GAGCTC 1 cut(s) 747
EcoRI GAATTC 2 cut(s) 445, 674
EcoRII CCWGG 2 cut(s) 299, 1242
EcoRV GATATC 1 cut(s) 884
EcoT38I GRGCYC 1 cut(s) 749
FalI AAGNNNNNCTT 6 cut(s) 37, 69, 171, 203, 451, 483
FaqI GGGAC 4 cut(s) 116, 368, 448, 1064
Fnu4HI GCNGC 4 cut(s) 735, 854, 1059, 1184
FokI GGATG 3 cut(s) 508, 1091, 1224
FriOI GRGCYC 1 cut(s) 749
Fsp4HI GCNGC 4 cut(s) 735, 854, 1059, 1184
FspBI CTAG 2 cut(s) 234, 1279
GlaI GCGC 1 cut(s) 727
GluI GCNGC 4 cut(s) 735, 854, 1059, 1184
GsuI CTGGAG 1 cut(s) 45
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 3 cut(s) 951, 981, 1186
HapII CCGG 3 cut(s) 837, 872, 1020
HgaI GACGC 1 cut(s) 207
HhaI GCGC 1 cut(s) 728
Hin1I GRCGYC 1 cut(s) 129
Hin6I GCGC 1 cut(s) 726
HinP1I GCGC 1 cut(s) 726
HinfI GANTC 8 cut(s) 40, 96, 110, 238, 378, 819, 840, 1089
HpaII CCGG 3 cut(s) 837, 872, 1020
HphI GGTGA 2 cut(s) 91, 107
Hpy188I TCNGA 7 cut(s) 39, 58, 85, 145, 211, 444, 512
Hpy188III TCNNGA 7 cut(s) 193, 340, 493, 823, 1177, 1195, 1253
Hpy99I CGWCG 1 cut(s) 223
HpyAV CCTTC 8 cut(s) 63, 254, 535, 535, 1082, 1192, 1197, 1224
HpyCH4III ACNGT 2 cut(s) 19, 271
HpyCH4IV ACGT 3 cut(s) 124, 129, 390
HpyCH4V TGCA 3 cut(s) 75, 911, 1276
HpyF10VI GCNNNNNNNGC 4 cut(s) 464, 568, 734, 1067
HpyF3I CTNAG 2 cut(s) 160, 684
HpySE526I ACGT 3 cut(s) 124, 129, 390
Hsp92I GRCGYC 1 cut(s) 129
HspAI GCGC 1 cut(s) 726
KroI GCCGGC 1 cut(s) 1019
KroNI GCCGGC 1 cut(s) 1021
Kzo9I GATC 6 cut(s) 58, 145, 332, 715, 961, 1033
LmnI GCTCC 4 cut(s) 288, 464, 752, 803
Lsp1109I GCAGC 2 cut(s) 746, 1045
LweI GCATC 2 cut(s) 773, 1180
MabI ACCWGGT 1 cut(s) 299
MaeI CTAG 2 cut(s) 234, 1279
MaeII ACGT 3 cut(s) 124, 129, 390
MaeIII GTNAC 2 cut(s) 97, 125
MalI GATC 6 cut(s) 60, 147, 334, 717, 963, 1035
MboI GATC 6 cut(s) 58, 145, 332, 715, 961, 1033
MboII GAAGA 8 cut(s) 57, 59, 415, 545, 603, 835, 1087, 1090
MflI RGATCY 2 cut(s) 145, 332
MhlI GDGCHC 1 cut(s) 749
MluCI AATT 8 cut(s) 10, 79, 445, 601, 674, 798, 901, 956
MlyI GAGTC 2 cut(s) 49, 105
MroNI GCCGGC 1 cut(s) 1019
MroXI GAANNNNTTC 1 cut(s) 52
MseI TTAA 5 cut(s) 78, 323, 350, 1026, 1110
MslI CAYNNNNRTG 3 cut(s) 389, 576, 827
MspCI CTTAAG 1 cut(s) 1109
MspI CCGG 3 cut(s) 837, 872, 1020
MspR9I CCNGG 2 cut(s) 301, 1244
MvaI CCWGG 2 cut(s) 301, 1244
MwoI GCNNNNNNNGC 4 cut(s) 464, 568, 734, 1067
NaeI GCCGGC 1 cut(s) 1021
NdeII GATC 6 cut(s) 58, 145, 332, 715, 961, 1033
NgoMIV GCCGGC 1 cut(s) 1019
NlaIV GGNNCC 3 cut(s) 290, 518, 1226
NmuCI GTSAC 2 cut(s) 97, 125
NspI RCATGY 1 cut(s) 349
PagI TCATGA 2 cut(s) 492, 822
PciI ACATGT 1 cut(s) 345
PdiI GCCGGC 1 cut(s) 1021
PdmI GAANNNNTTC 1 cut(s) 52
PfeI GAWTC 6 cut(s) 110, 238, 378, 819, 840, 1089
PflFI GACNNNGTC 1 cut(s) 95
PflMI CCANNNNNTGG 1 cut(s) 1243
PinAI ACCGGT 1 cut(s) 871
PkrI GCNGC 4 cut(s) 736, 855, 1060, 1185
PleI GAGTC 2 cut(s) 48, 104
PpsI GAGTC 2 cut(s) 48, 104
Ppu21I YACGTR 2 cut(s) 125, 391
PscI ACATGT 1 cut(s) 345
PshBI ATTAAT 1 cut(s) 78
Psp124BI GAGCTC 1 cut(s) 749
Psp6I CCWGG 2 cut(s) 299, 1242
PspGI CCWGG 2 cut(s) 299, 1242
PspN4I GGNNCC 3 cut(s) 290, 518, 1226
PspPI GGNCC 1 cut(s) 980
PsrI GAACNNNNNNTAC 2 cut(s) 12, 44
PstNI CAGNNNCTG 1 cut(s) 23
PsuI RGATCY 2 cut(s) 145, 332
PsyI GACNNNGTC 1 cut(s) 95
RsaI GTAC 3 cut(s) 200, 415, 972
RsaNI GTAC 3 cut(s) 199, 414, 971
RseI CAYNNNNRTG 3 cut(s) 389, 576, 827
SacI GAGCTC 1 cut(s) 749
SaqAI TTAA 5 cut(s) 78, 323, 350, 1026, 1110
SatI GCNGC 4 cut(s) 735, 854, 1059, 1184
Sau3AI GATC 6 cut(s) 58, 145, 332, 715, 961, 1033
Sau96I GGNCC 1 cut(s) 980
SchI GAGTC 2 cut(s) 49, 105
ScrFI CCNGG 2 cut(s) 301, 1244
SduI GDGCHC 1 cut(s) 749
SexAI ACCWGGT 1 cut(s) 299
SfaNI GCATC 2 cut(s) 773, 1180
SmiMI CAYNNNNRTG 3 cut(s) 389, 576, 827
SmlI CTYRAG 2 cut(s) 1109, 1175
SmoI CTYRAG 2 cut(s) 1109, 1175
Sse9I AATT 8 cut(s) 10, 79, 445, 601, 674, 798, 901, 956
SsiI CCGC 3 cut(s) 847, 854, 1183
SspI AATATT 2 cut(s) 321, 453
SspMI CTAG 2 cut(s) 234, 1279
SstI GAGCTC 1 cut(s) 749
StyD4I CCNGG 2 cut(s) 299, 1242
TaaI ACNGT 2 cut(s) 19, 271
TaiI ACGT 3 cut(s) 127, 132, 393
TaqI TCGA 9 cut(s) 43, 90, 192, 221, 241, 254, 599, 638, 714
TasI AATT 8 cut(s) 10, 79, 445, 601, 674, 798, 901, 956
TatI WGTACW 1 cut(s) 198
TauI GCSGC 2 cut(s) 856, 1186
TfiI GAWTC 6 cut(s) 110, 238, 378, 819, 840, 1089
Tru1I TTAA 5 cut(s) 78, 323, 350, 1026, 1110
Tru9I TTAA 5 cut(s) 78, 323, 350, 1026, 1110
TscAI CASTG 2 cut(s) 948, 1278
TseFI GTSAC 2 cut(s) 97, 125
TseI GCWGC 2 cut(s) 734, 1058
Tsp45I GTSAC 2 cut(s) 97, 125
TspGWI ACGGA 1 cut(s) 343
TspRI CASTG 2 cut(s) 948, 1278
Tth111I GACNNNGTC 1 cut(s) 95
Van91I CCANNNNNTGG 1 cut(s) 1243
Vha464I CTTAAG 1 cut(s) 1109
VspI ATTAAT 1 cut(s) 78
XapI RAATTY 5 cut(s) 10, 445, 601, 674, 956
XceI RCATGY 1 cut(s) 349
XmnI GAANNNNTTC 1 cut(s) 52
XspI CTAG 2 cut(s) 234, 1279
ZraI GACGTC 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.