Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003317

Physical Location & Seq

Genomic Coordinates Reverse (-)

36579536 .. 36585375

Gene Structure 5840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00028670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGATCCTCTCTCTCTCTCTCTCTCTCAACCATGGCAGCTCCGGCGGCCCATTTATCCATGCCGCACCTCCTCAACGAGTGCATAGCCTACCAACGCGCCCGGATCTCAACCTCGACCGCTTCCTCTCCCGCTCCGACCTCGACAAGCACCTCTCCAATCTCCCGAAATCCTCCCAGGTCCTCGACATCGTCAAGTCCGACGTCGACCATGTCCTCTCCAACTTCTCCTCCACCTCGCGACCTCACCGACCACATATAAGTGGTGATGGTGGTGGCGGAAGAAGAGATGGTGAAGGTGGCAATAATGGCTTGATGTATTTGGTGTGGGAAGATGTGAGTGTTGTGCTTCCAAACTTTGGTATTGGAAATAGCAATAATGGAGGACACACCAGAAGATTGCTTGATGGCCTCACTGGTTTTGCTGAGCCTGAAAATGTGCTGTTGGGAACCCTAACAGTACGAGAAACCATAACTTACTCGGCTCATCTAAGGCTCCCAACTAGTCTGACCAAACAAGAGGTCAATGACATTGTTGATGCCACAATTACCGATATGGGTCTGCAAGACTGTGCTCACAGGCTTATCGGAAACTGGCATTTGAGGGGCATAAGTGGAGGAGAGAAGAAGAGGCTAAGCATTGCACTCGAAATACTCACAAAGCCAAGGTTGTTGTTTCTCGATGAGCCTACCAGTGGCCTCGACAGTGCTGCAGCTTTCTTCGTAGTTCAAACCCTCAGATATATTGCTAAAGATGGCAGAACTGTCATTTCTTCGATTCATCAGCCCAGTAGTGAAGTGTTTGCTTTGTTTGATGATCTTGTTCTGCTTTCTAGTGGCCAAACAGTTTATTCTGGTCAAGCAAAAATGGCAGTAGAGTTCTTTGCTAAAGCTGGAGTACCATGCCCAAGTCGAAGAAACCCTTCTGATCACTTTCTTCGTTGTATTAATTCAGACTTCGACGAAGTCACAATGAACACCTCTCACAAAATACGTGAAATCCCAAAATCATCAGAACCTTTAATGAACTTTGCAACAGCAGAGATAAAAGCAATGCTTGTTGATCAGTACAGACGCTCGGAGTATGGCCACGATGATAATGAAAAACTTGTTTTACAGGAAGGACTTGGGGTAGAAAAGAGGAGTGGAAGCCAAGCAAAGTGGTGGAAGCAACTCTCAATATTGACACAGAGGTCTTTCCTCAACATGTCTAGGGATATGGGGTATTACTGGGTGAGAATCATCGTCTACATACTTTTATCTCTTTGCGTTGGCACAATTTTCTATGACCTGGGAACAAATTACACTTCAATATTTGCAAGAGGAGCTTGTGCTGGATTTATTTCTGGCTTCATGACTTTCATGTCCATTGGAGGCTTCCCATCCTTCCTTGAAGAAATGAAGGTAAAAGTAATTTCTAAAGAGAAAGGCTCAATGGGCATTATGGAGTTGCTGTCTTTACCCTGTCAAATTTCCTCTCTTCCTTCCCCTTTCTTGGCTTTGATGTCAATTGCATCTGCAACTATAACTTACTACATGGTGGAAAAGCATTCTCATTTCTCCGACTATGTGTTCATGTGCCTTGATCTTCTCAGCGCCATTGCAGCGGTAGAAAGCTCCATGATGATCATAGCTTCTCTTGTTCCGAACTACTTAACGGGAGTAATAATTGGAGCAGGATACTTGGGAATCATGATGATGACTGCCGGATTCTTCCGCTTCATGCCTGACCTTCCCAAACCCGTTTGGCGCTATCCAGTTTCATATCTGAACTATGGTGCATGGGCGCTGCAGGGAGAATACAAGAACGGATTGATTGGCCGTGAGTTTGATTCTCTTACACCCAATGGCCCGAAGCTGAAAGGCGAGGACATACTCAAAACTCTGCTGGGTGTTCAACCAGATCAATCAAAGTGGTGGGATTTGGCTGCTGTCTGTGCCATTGTTGTATCTTTCAGATTTATTTTCTTCATCATCCTTAAGATAAAAGAGAGAGCTTCACCTCTTTTCCGAGCATATTATGCTAAGCAAACTCTGAAGCATCTCAAGAAGCGACCCTCATTCAGGAAAGATGGAACTCTTTTCCCTTCCATGAGACATCAACCTCTCCATCCCTTGTCTTTTCAAGAGGGTCTCAACTCTCCACTGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008150 GO:0009506 GO:0009628 GO:0009651 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944 GO:0080051 GO:0080167 GO:0080172

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

716

Amino Acids

79.65

Weight (kDa)

8.76

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	138 - 231	2.9e-10	ABC transporter
ABC2_membrane_7	PF19055	260 - 334	9.5e-12	ABC-2 type transporter
ABC2_membrane	PF01061	390 - 598	1.7e-25	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51460
fragaria_vesca	FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480
malus_domestica	MD00G1192100.v1.1 MD03G1172300.v1.1
prunus_persica	Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1
pyrus_communis	pycom03g12950
rosa_chinensis	RchiOBHm_Chr5g0052851 RchiOBHm_Chr5g0052971
rosa_laevigata	RLG00000034787
rosa_multiflora	Rmu_sc0006729.1_g000004 Rmu_ssc0000311.1_g000005 Rmu_ssc0000311.1_g000013
rosa_roxburghii	Rroxscaffold_1G00027600 Rroxscaffold_1G00028670 Rroxscaffold_1G00028720 Rroxscaffold_1G00028730
rosa_rugosa	Rorug05G0269000
rosa_samantha	Rh5BG352000 Rh5CG378600 Rh5DG368300
rosa_wichuraiana	Rw5G032170 Rw5G032180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1189, 1360
AatII	GACGTC	1 cut(s)	204
AccB7I	CCANNNNNTGG	1 cut(s)	356
AccBSI	CCGCTC	1 cut(s)	132
AccI	GTMKAC	2 cut(s)	204, 1245
AccII	CGCG	2 cut(s)	97, 238
AciI	CCGC	7 cut(s)	45, 63, 118, 130, 276, 1604, 1714
AclWI	GGATC	1 cut(s)	111
AcoI	YGGCCR	3 cut(s)	835, 1084, 1816
AcsI	RAATTY	1 cut(s)	1467
AcuI	CTGAAG	1 cut(s)	2054
AcyI	GRCGYC	1 cut(s)	201
AfaI	GTAC	3 cut(s)	459, 897, 1067
AfiI	CCNNNNNNNGG	4 cut(s)	356, 692, 1492, 2061
AflII	CTTAAG	1 cut(s)	1976
AflIII	ACRYGT	1 cut(s)	1203
AgsI	TTSAA	5 cut(s)	728, 1308, 1391, 1895, 2123
AhlI	ACTAGT	1 cut(s)	500
AjnI	CCWGG	2 cut(s)	174, 1287
AluBI	AGCT	8 cut(s)	39, 713, 890, 1325, 1614, 1631, 1855, 1994
AluI	AGCT	8 cut(s)	39, 713, 890, 1325, 1614, 1631, 1855, 1994
Alw21I	GWGCWC	1 cut(s)	574
Alw26I	GTCTC	2 cut(s)	2086, 2135
AlwI	GGATC	1 cut(s)	111
AoxI	GGCC	7 cut(s)	46, 406, 694, 835, 1084, 1816, 1846
ApeKI	GCWGC	6 cut(s)	36, 707, 710, 1601, 1786, 1925
ApoI	RAATTY	1 cut(s)	1467
ArsI	GACNNNNNNTTYG	2 cut(s)	504, 536
AseI	ATTAAT	1 cut(s)	945
Asp700I	GAANNNNTTC	1 cut(s)	919
AspLEI	GCGC	4 cut(s)	99, 1595, 1749, 1786
AspS9I	GGNCC	3 cut(s)	47, 178, 1847
AsuC2I	CCSGG	1 cut(s)	101
AsuHPI	GGTGA	5 cut(s)	236, 275, 302, 1243, 1989
AvaII	GGWCC	1 cut(s)	178
BalI	TGGCCA	2 cut(s)	837, 1086
Bbv12I	GWGCWC	1 cut(s)	574
BbvI	GCAGC	6 cut(s)	48, 694, 722, 1613, 1773, 1912
BccI	CCATC	7 cut(s)	260, 281, 398, 746, 1387, 2063, 2115
BceAI	ACGGC	1 cut(s)	1803
BcgI	CGANNNNNNTGC	4 cut(s)	625, 659, 689, 723
BciT130I	CCWGG	2 cut(s)	176, 1289
BciVI	GTATCC	1 cut(s)	1670
BclI	TGATCA	3 cut(s)	925, 1060, 1623
BcnI	CCSGG	1 cut(s)	101
BcoDI	GTCTC	2 cut(s)	2086, 2135
BcuI	ACTAGT	1 cut(s)	500
BfaI	CTAG	4 cut(s)	501, 831, 1209, 2149
BfmI	CTRYAG	2 cut(s)	708, 1787
BfoI	RGCGCY	3 cut(s)	1596, 1750, 1787
BfrI	CTTAAG	1 cut(s)	1976
BfuI	GTATCC	1 cut(s)	1670
BisI	GCNGC	8 cut(s)	37, 46, 63, 708, 711, 1602, 1787, 1926
BlpI	GCTNAGC	3 cut(s)	423, 632, 2022
BlsI	GCNGC	8 cut(s)	38, 47, 64, 709, 712, 1603, 1788, 1927
Bme1390I	CCNGG	3 cut(s)	101, 176, 1289
Bme18I	GGWCC	1 cut(s)	178
BmgT120I	GGNCC	3 cut(s)	47, 178, 1847
BmiI	GGNNCC	2 cut(s)	448, 494
BmrFI	CCNGG	3 cut(s)	101, 176, 1289
BmrI	ACTGGG	2 cut(s)	780, 1237
BmsI	GCATC	3 cut(s)	526, 1520, 2047
BmuI	ACTGGG	2 cut(s)	780, 1237
BplI	GAGNNNNNCTC	2 cut(s)	1412, 1444
BpmI	CTGGAG	1 cut(s)	912
Bpu1102I	GCTNAGC	3 cut(s)	423, 632, 2022
BpuEI	CTTGAG	1 cut(s)	2027
BpuMI	CCSGG	1 cut(s)	101
BsaAI	YACGTR	1 cut(s)	992
BsaHI	GRCGYC	1 cut(s)	201
BsaI	GGTCTC	1 cut(s)	2135
BsaJI	CCNNGG	4 cut(s)	31, 174, 662, 1288
BsaXI	ACNNNNNCTCC	4 cut(s)	212, 242, 1436, 1466
Bsc4I	CCNNNNNNNGG	4 cut(s)	356, 692, 1492, 2061
Bse1I	ACTGG	6 cut(s)	418, 596, 690, 786, 1232, 1754
Bse3DI	GCAATG	3 cut(s)	636, 1056, 1596
BseBI	CCWGG	2 cut(s)	176, 1289
BseDI	CCNNGG	4 cut(s)	31, 174, 662, 1288
BseGI	GGATG	3 cut(s)	1379, 1971, 2107
BseLI	CCNNNNNNNGG	4 cut(s)	356, 692, 1492, 2061
BseMI	GCAATG	3 cut(s)	636, 1056, 1596
BseMII	CTCAG	3 cut(s)	414, 748, 1603
BseNI	ACTGG	6 cut(s)	418, 596, 690, 786, 1232, 1754
BseRI	GAGGAG	5 cut(s)	60, 217, 630, 1153, 1335
BseXI	GCAGC	6 cut(s)	48, 694, 722, 1613, 1773, 1912
BseYI	CCCAGC	1 cut(s)	1885
BsgI	GTGCAG	1 cut(s)	2129
Bsh1236I	CGCG	2 cut(s)	97, 238
Bsh1285I	CGRYCG	1 cut(s)	118
BshFI	GGCC	7 cut(s)	48, 408, 696, 837, 1086, 1818, 1848
BsiEI	CGRYCG	1 cut(s)	118
BsiHKAI	GWGCWC	1 cut(s)	574
BsiSI	CCGG	3 cut(s)	42, 101, 1704
BslI	CCNNNNNNNGG	4 cut(s)	356, 692, 1492, 2061
BsmAI	GTCTC	2 cut(s)	2086, 2135
BsmI	GAATGC	1 cut(s)	1546
BsnI	GGCC	7 cut(s)	48, 408, 696, 837, 1086, 1818, 1848
Bso31I	GGTCTC	1 cut(s)	2135
Bsp1286I	GDGCHC	1 cut(s)	574
Bsp143I	GATC	8 cut(s)	3, 103, 814, 925, 1060, 1582, 1623, 1900
Bsp1720I	GCTNAGC	3 cut(s)	423, 632, 2022
Bsp19I	CCATGG	1 cut(s)	31
Bsp68I	TCGCGA	1 cut(s)	238
BspACI	CCGC	7 cut(s)	45, 63, 118, 130, 276, 1604, 1714
BspANI	GGCC	7 cut(s)	48, 408, 696, 837, 1086, 1818, 1848
BspCNI	CTCAG	3 cut(s)	415, 747, 1602
BspFNI	CGCG	2 cut(s)	97, 238
BspHI	TCATGA	2 cut(s)	1350, 1689
BspLI	GGNNCC	2 cut(s)	448, 494
BspMAI	CTGCAG	2 cut(s)	712, 1791
BspPI	GGATC	1 cut(s)	111
BspTI	CTTAAG	1 cut(s)	1976
BspTNI	GGTCTC	1 cut(s)	2135
BsrBI	CCGCTC	1 cut(s)	132
BsrDI	GCAATG	3 cut(s)	636, 1056, 1596
BsrI	ACTGG	6 cut(s)	418, 596, 690, 786, 1232, 1754
BssECI	CCNNGG	4 cut(s)	31, 174, 662, 1288
BssMI	GATC	8 cut(s)	3, 103, 814, 925, 1060, 1582, 1623, 1900
BssNI	GRCGYC	1 cut(s)	201
BssT1I	CCWWGG	2 cut(s)	31, 662
Bst2UI	CCWGG	2 cut(s)	176, 1289
Bst4CI	ACNGT	5 cut(s)	457, 569, 704, 763, 844
Bst6I	CTCTTC	3 cut(s)	277, 620, 1482
BstACI	GRCGYC	1 cut(s)	201
BstAFI	CTTAAG	1 cut(s)	1976
BstAPI	GCANNNNNTGC	1 cut(s)	2018
BstBAI	YACGTR	1 cut(s)	992
BstDEI	CTNAG	6 cut(s)	423, 488, 632, 734, 1589, 2022
BstDSI	CCRYGG	1 cut(s)	31
BstENI	CCTNNNNNAGG	1 cut(s)	2059
BstF5I	GGATG	3 cut(s)	1379, 1971, 2107
BstFNI	CGCG	2 cut(s)	97, 238
BstH2I	RGCGCY	3 cut(s)	1596, 1750, 1787
BstHHI	GCGC	4 cut(s)	99, 1595, 1749, 1786
BstKTI	GATC	8 cut(s)	6, 106, 817, 928, 1063, 1585, 1626, 1903
BstMAI	GTCTC	2 cut(s)	2086, 2135
BstMBI	GATC	8 cut(s)	3, 103, 814, 925, 1060, 1582, 1623, 1900
BstMCI	CGRYCG	1 cut(s)	118
BstMWI	GCNNNNNNNGC	9 cut(s)	42, 45, 306, 866, 1322, 1434, 1601, 1934, 2018
BstNI	CCWGG	2 cut(s)	176, 1289
BstNSI	RCATGY	1 cut(s)	1207
BstSCI	CCNGG	3 cut(s)	99, 174, 1287
BstSFI	CTRYAG	2 cut(s)	708, 1787
BstUI	CGCG	2 cut(s)	97, 238
BstV1I	GCAGC	6 cut(s)	48, 694, 722, 1613, 1773, 1912
BstX2I	RGATCY	1 cut(s)	103
BstYI	RGATCY	1 cut(s)	103
BsuI	GTATCC	1 cut(s)	1670
BsuRI	GGCC	7 cut(s)	48, 408, 696, 837, 1086, 1818, 1848
BtgI	CCRYGG	1 cut(s)	31
BtsCI	GGATG	3 cut(s)	1379, 1971, 2107
BtsI	GCAGTG	1 cut(s)	2141
BtsIMutI	CAGTG	4 cut(s)	411, 697, 709, 2141
BtuMI	TCGCGA	1 cut(s)	238
CciI	TCATGA	2 cut(s)	1350, 1689
CfoI	GCGC	4 cut(s)	99, 1595, 1749, 1786
Cfr13I	GGNCC	3 cut(s)	47, 178, 1847
CseI	GACGC	1 cut(s)	1080
Csp6I	GTAC	3 cut(s)	458, 896, 1066
CspCI	CAANNNNNGTGG	4 cut(s)	1139, 1174, 1892, 1927
CviQI	GTAC	3 cut(s)	458, 896, 1066
DdeI	CTNAG	6 cut(s)	423, 488, 632, 734, 1589, 2022
DpnI	GATC	8 cut(s)	5, 105, 816, 927, 1062, 1584, 1625, 1902
DpnII	GATC	8 cut(s)	3, 103, 814, 925, 1060, 1582, 1623, 1900
DrdI	GACNNNNNNGTC	2 cut(s)	1189, 1360
DseDI	GACNNNNNNGTC	2 cut(s)	1189, 1360
EaeI	YGGCCR	3 cut(s)	835, 1084, 1816
Eam1104I	CTCTTC	3 cut(s)	277, 620, 1482
EarI	CTCTTC	3 cut(s)	277, 620, 1482
EciI	GGCGGA	1 cut(s)	291
Eco130I	CCWWGG	2 cut(s)	31, 662
Eco31I	GGTCTC	1 cut(s)	2135
Eco47I	GGWCC	1 cut(s)	178
Eco57I	CTGAAG	1 cut(s)	2054
EcoNI	CCTNNNNNAGG	1 cut(s)	2059
EcoO109I	RGGNCCY	1 cut(s)	178
EcoRII	CCWGG	2 cut(s)	174, 1287
EcoT14I	CCWWGG	2 cut(s)	31, 662
ErhI	CCWWGG	2 cut(s)	31, 662
FalI	AAGNNNNNCTT	6 cut(s)	904, 936, 1038, 1070, 1309, 1341
FauI	CCCGC	1 cut(s)	137
FbaI	TGATCA	3 cut(s)	925, 1060, 1623
FblI	GTMKAC	2 cut(s)	204, 1245
Fnu4HI	GCNGC	8 cut(s)	37, 46, 63, 708, 711, 1602, 1787, 1926
FokI	GGATG	3 cut(s)	1366, 1958, 2094
Fsp4HI	GCNGC	8 cut(s)	37, 46, 63, 708, 711, 1602, 1787, 1926
FspBI	CTAG	4 cut(s)	501, 831, 1209, 2149
GlaI	GCGC	4 cut(s)	98, 1594, 1748, 1785
GluI	GCNGC	8 cut(s)	37, 46, 63, 708, 711, 1602, 1787, 1926
GsaI	CCCAGC	1 cut(s)	1889
GsuI	CTGGAG	1 cut(s)	912
HaeII	RGCGCY	3 cut(s)	1596, 1750, 1787
HaeIII	GGCC	7 cut(s)	48, 408, 696, 837, 1086, 1818, 1848
HapII	CCGG	3 cut(s)	42, 101, 1704
HgaI	GACGC	1 cut(s)	1080
HhaI	GCGC	4 cut(s)	99, 1595, 1749, 1786
Hin1I	GRCGYC	1 cut(s)	201
Hin6I	GCGC	4 cut(s)	97, 1593, 1747, 1784
HinP1I	GCGC	4 cut(s)	97, 1593, 1747, 1784
HincII	GTYRAC	1 cut(s)	205
HindII	GTYRAC	1 cut(s)	205
HinfI	GANTC	5 cut(s)	775, 1236, 1686, 1707, 1829
HpaII	CCGG	3 cut(s)	42, 101, 1704
HphI	GGTGA	5 cut(s)	236, 275, 302, 1243, 1989
Hpy166II	GTNNAC	2 cut(s)	205, 1246
Hpy188III	TCNNGA	8 cut(s)	163, 237, 677, 1351, 1690, 2044, 2062, 2123
Hpy8I	GTNNAC	2 cut(s)	205, 1246
Hpy99I	CGWCG	3 cut(s)	203, 206, 962
HpyAV	CCTTC	8 cut(s)	287, 930, 1112, 1393, 1393, 1491, 1739, 2094
HpyCH4III	ACNGT	5 cut(s)	457, 569, 704, 763, 844
HpyCH4IV	ACGT	2 cut(s)	201, 991
HpyF10VI	GCNNNNNNNGC	9 cut(s)	42, 45, 306, 866, 1322, 1434, 1601, 1934, 2018
HpyF3I	CTNAG	6 cut(s)	423, 488, 632, 734, 1589, 2022
HpySE526I	ACGT	2 cut(s)	201, 991
Hsp92I	GRCGYC	1 cut(s)	201
HspAI	GCGC	4 cut(s)	97, 1593, 1747, 1784
Ksp22I	TGATCA	3 cut(s)	925, 1060, 1623
Kzo9I	GATC	8 cut(s)	3, 103, 814, 925, 1060, 1582, 1623, 1900
LmnI	GCTCC	6 cut(s)	44, 137, 498, 1322, 1619, 1670
Lsp1109I	GCAGC	6 cut(s)	48, 694, 722, 1613, 1773, 1912
LweI	GCATC	3 cut(s)	526, 1520, 2047
MaeI	CTAG	4 cut(s)	501, 831, 1209, 2149
MaeII	ACGT	2 cut(s)	201, 991
MaeIII	GTNAC	1 cut(s)	964
MalI	GATC	8 cut(s)	5, 105, 816, 927, 1062, 1584, 1625, 1902
MbiI	CCGCTC	1 cut(s)	132
MboI	GATC	8 cut(s)	3, 103, 814, 925, 1060, 1582, 1623, 1900
MfeI	CAATTG	1 cut(s)	1506
MflI	RGATCY	1 cut(s)	103
MhlI	GDGCHC	1 cut(s)	574
MlsI	TGGCCA	2 cut(s)	837, 1086
MluCI	AATT	8 cut(s)	543, 946, 1275, 1297, 1410, 1467, 1506, 1665
MluNI	TGGCCA	2 cut(s)	837, 1086
MmeI	TCCRAC	4 cut(s)	159, 222, 243, 1584
Mox20I	TGGCCA	2 cut(s)	837, 1086
MroXI	GAANNNNTTC	1 cut(s)	919
MscI	TGGCCA	2 cut(s)	837, 1086
MseI	TTAA	4 cut(s)	945, 1019, 1652, 1977
MslI	CAYNNNNRTG	2 cut(s)	258, 1694
Msp20I	TGGCCA	2 cut(s)	837, 1086
MspA1I	CMGCKG	1 cut(s)	1604
MspCI	CTTAAG	1 cut(s)	1976
MspI	CCGG	3 cut(s)	42, 101, 1704
MspR9I	CCNGG	3 cut(s)	101, 176, 1289
MunI	CAATTG	1 cut(s)	1506
Mva1269I	GAATGC	1 cut(s)	1546
MvaI	CCWGG	2 cut(s)	176, 1289
MvnI	CGCG	2 cut(s)	97, 238
MwoI	GCNNNNNNNGC	9 cut(s)	42, 45, 306, 866, 1322, 1434, 1601, 1934, 2018
NciI	CCSGG	1 cut(s)	101
NcoI	CCATGG	1 cut(s)	31
NdeII	GATC	8 cut(s)	3, 103, 814, 925, 1060, 1582, 1623, 1900
NlaIV	GGNNCC	2 cut(s)	448, 494
NmeAIII	GCCGAG	1 cut(s)	458
NmuCI	GTSAC	1 cut(s)	964
NruI	TCGCGA	1 cut(s)	238
NspI	RCATGY	1 cut(s)	1207
PagI	TCATGA	2 cut(s)	1350, 1689
PciI	ACATGT	1 cut(s)	1203
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PctI	GAATGC	1 cut(s)	1546
PdmI	GAANNNNTTC	1 cut(s)	919
PfeI	GAWTC	5 cut(s)	775, 1236, 1686, 1707, 1829
PflFI	GACNNNGTC	3 cut(s)	188, 209, 962
PflMI	CCANNNNNTGG	1 cut(s)	356
PkrI	GCNGC	8 cut(s)	38, 47, 64, 709, 712, 1603, 1788, 1927
Ppu21I	YACGTR	1 cut(s)	992
PpuMI	RGGWCCY	1 cut(s)	178
PscI	ACATGT	1 cut(s)	1203
PshBI	ATTAAT	1 cut(s)	945
Psp5II	RGGWCCY	1 cut(s)	178
Psp6I	CCWGG	2 cut(s)	174, 1287
PspFI	CCCAGC	1 cut(s)	1885
PspGI	CCWGG	2 cut(s)	174, 1287
PspN4I	GGNNCC	2 cut(s)	448, 494
PspPI	GGNCC	3 cut(s)	47, 178, 1847
PspPPI	RGGWCCY	1 cut(s)	178
PstI	CTGCAG	2 cut(s)	712, 1791
PsuI	RGATCY	1 cut(s)	103
PsyI	GACNNNGTC	3 cut(s)	188, 209, 962
RruI	TCGCGA	1 cut(s)	238
RsaI	GTAC	3 cut(s)	459, 897, 1067
RsaNI	GTAC	3 cut(s)	458, 896, 1066
RseI	CAYNNNNRTG	2 cut(s)	258, 1694
SalI	GTCGAC	1 cut(s)	203
SaqAI	TTAA	4 cut(s)	945, 1019, 1652, 1977
SatI	GCNGC	8 cut(s)	37, 46, 63, 708, 711, 1602, 1787, 1926
Sau3AI	GATC	8 cut(s)	3, 103, 814, 925, 1060, 1582, 1623, 1900
Sau96I	GGNCC	3 cut(s)	47, 178, 1847
ScrFI	CCNGG	3 cut(s)	101, 176, 1289
SduI	GDGCHC	1 cut(s)	574
SfaNI	GCATC	3 cut(s)	526, 1520, 2047
SfcI	CTRYAG	2 cut(s)	708, 1787
SinI	GGWCC	1 cut(s)	178
SmiMI	CAYNNNNRTG	2 cut(s)	258, 1694
SmlI	CTYRAG	2 cut(s)	1976, 2042
SmoI	CTYRAG	2 cut(s)	1976, 2042
SpeI	ACTAGT	1 cut(s)	500
Sse9I	AATT	8 cut(s)	543, 946, 1275, 1297, 1410, 1467, 1506, 1665
SsiI	CCGC	7 cut(s)	45, 63, 118, 130, 276, 1604, 1714
SspI	AATATT	2 cut(s)	1179, 1311
SspMI	CTAG	4 cut(s)	501, 831, 1209, 2149
StyD4I	CCNGG	3 cut(s)	99, 174, 1287
StyI	CCWWGG	2 cut(s)	31, 662
TaaI	ACNGT	5 cut(s)	457, 569, 704, 763, 844
TaiI	ACGT	2 cut(s)	204, 994
TasI	AATT	8 cut(s)	543, 946, 1275, 1297, 1410, 1467, 1506, 1665
TatI	WGTACW	1 cut(s)	1065
TauI	GCSGC	2 cut(s)	48, 65
TfiI	GAWTC	5 cut(s)	775, 1236, 1686, 1707, 1829
Tru1I	TTAA	4 cut(s)	945, 1019, 1652, 1977
Tru9I	TTAA	4 cut(s)	945, 1019, 1652, 1977
TscAI	CASTG	4 cut(s)	418, 697, 709, 2148
TseFI	GTSAC	1 cut(s)	964
TseI	GCWGC	6 cut(s)	36, 707, 710, 1601, 1786, 1925
Tsp45I	GTSAC	1 cut(s)	964
TspGWI	ACGGA	1 cut(s)	1821
TspRI	CASTG	4 cut(s)	418, 697, 709, 2148
Tth111I	GACNNNGTC	3 cut(s)	188, 209, 962
Van91I	CCANNNNNTGG	1 cut(s)	356
Vha464I	CTTAAG	1 cut(s)	1976
VpaK11BI	GGWCC	1 cut(s)	178
VspI	ATTAAT	1 cut(s)	945
XagI	CCTNNNNNAGG	1 cut(s)	2059
XapI	RAATTY	1 cut(s)	1467
XceI	RCATGY	1 cut(s)	1207
XmiI	GTMKAC	2 cut(s)	204, 1245
XmnI	GAANNNNTTC	1 cut(s)	919
XspI	CTAG	4 cut(s)	501, 831, 1209, 2149
ZraI	GACGTC	1 cut(s)	202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.