Rmu_sc0006729.1_g000004

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006729.1
Physical Location & Seq
Reverse (-)
27282 .. 29889
2608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006729.1_g000004.1.cds

Sequence Viewer

Length: 1866 bp
atgactggaaatgttcttcttaatggaaagaagacgagacttgactatggtgttgctgtaagtaaagttcataccaaccctatcctcatacttttcgatattcctttcagatatcaaataatttcgagcgacaaaatcttggctaatttgaaatttcaggcttatgtgacccaagaaaatgtgctgttgggaaccctaacagttcgagaaaccataacttactcggctcatctaaggctcccaaatagtctgaccaaacaagaggtcaatgacattgttaatgccacaattaccgatatgggtctgcaagactgtgctcacagacttatcggaaactggcatttgaggggcataagtggaggagagaagaagaggctgagcattgcactcgaaatactcacaaagccaaggttgttgtttctcgatgagcctaccagtggcctcgacagtgctgcagctttcttcgtagttcaaaccctcagatacattgctaaagatggcagaactgtcatttcttcgattcatcagcccagtagtgaagtgtttgctttgtttgatgatcttgttctgctttctagtggccaaacagtttattctggtcaagcaaaaatggcagtagagttctttgctaaagctggagttccatgcccaagtcgaagaaacccttctgatcactttcttcgttgtattaattcagacttcgacgaagtcacaatgaacacctctcacaaaatacgtgaaatcccaaaatcatcagaacctttaatgaactttgcaacagcagagataaaagcaatgcttgttgatcagtacagacgctcggagtatgcaacaagtacaagaatcaggattcgagaaatatcgtccatggtaaagcatgaggtttactattttacagctggcactcttaagaggtctttcctcaacatgtctagggatatggggtattactgggtgagaatcatcgtctacatacttttatctctttgcgttggcacaattttctatgacctgggaacaaattacacttcaatatttgcaagaggagcttgtgctggatttatttctggcttcatgactttcatgtccattggaggcttcccatccttccttgaagaaatgaaggtttttcatagagaaaggctcaatgggcattatggagttgctgtctttactctgtcaaatttcctctcttccttcccattcttggctttgatgtcaattgcatccgcaactataacttactacttggtggaaaagcattctcatttctccaactatgtgttcatgtgccttgatcttctcagcgccattgcagcggtagaaagctccatgatgatcatagcttctcttgttccgaactacttaatgggagtaataattggagcaggatacttgggaatcatgatgatgactgccggattcttccgcttcatgcctgaccttcccaaaccaatttggcgctatccagtttcatatctgaactatggtgcatgggcgctgcagggagaatacaagaacggattgattggccgtgagtttgattctcttacacccaatggcccgaagctgaaaggcgaggacatgctcaaaactctgctgggtattcaaccagatcaatcaaagtggtgggatttggctgccgtctgtgccattgttgtatctttcagatttattttcttcatcatccttaagatcaaagagagagcttcacctcttttccgagcatgttatgctaagcaaactctgaagcatctcaagaagcgaccctcattcaggaaagatgcaactcttttcccttccatgagacatcaacctctccatcccttgtcttttcaagaaggtctcaactctccactgcactag

Protein Analysis

621

Amino Acids

70.11

Weight (kDa)

9.34

Isoelectric Point (pI)

35.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1084
AccI GTMKAC 1 cut(s) 969
AciI CCGC 3 cut(s) 1230, 1319, 1429
AcoI YGGCCR 2 cut(s) 580, 1531
AcsI RAATTY 2 cut(s) 152, 1183
AcuI CTGAAG 1 cut(s) 1769
AfaI GTAC 2 cut(s) 812, 838
AfiI CCNNNNNNNGG 3 cut(s) 437, 1207, 1776
AflII CTTAAG 2 cut(s) 908, 1691
AflIII ACRYGT 1 cut(s) 927
AgsI TTSAA 6 cut(s) 151, 473, 1032, 1115, 1610, 1838
AjnI CCWGG 1 cut(s) 1011
AjuI GAANNNNNNNTTGG 2 cut(s) 1268, 1300
AluBI AGCT 8 cut(s) 458, 635, 899, 1049, 1329, 1346, 1570, 1709
AluI AGCT 8 cut(s) 458, 635, 899, 1049, 1329, 1346, 1570, 1709
Alw21I GWGCWC 1 cut(s) 319
Alw26I GTCTC 3 cut(s) 31, 1801, 1850
AoxI GGCC 4 cut(s) 439, 580, 1531, 1561
ApeKI GCWGC 5 cut(s) 452, 455, 1316, 1501, 1640
ApoI RAATTY 2 cut(s) 152, 1183
ArsI GACNNNNNNTTYG 2 cut(s) 249, 281
AseI ATTAAT 1 cut(s) 690
Asp700I GAANNNNTTC 1 cut(s) 664
AspLEI GCGC 3 cut(s) 1310, 1464, 1501
AspS9I GGNCC 1 cut(s) 1562
AsuHPI GGTGA 2 cut(s) 967, 1704
BalI TGGCCA 1 cut(s) 582
BbsI GAAGAC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 319
BbvI GCAGC 5 cut(s) 439, 467, 1328, 1488, 1627
BccI CCATC 3 cut(s) 491, 1111, 1830
BceAI ACGGC 2 cut(s) 1518, 1628
BcgI CGANNNNNNTGC 4 cut(s) 370, 404, 434, 468
BciT130I CCWGG 1 cut(s) 1013
BciVI GTATCC 1 cut(s) 1385
BclI TGATCA 3 cut(s) 670, 805, 1338
BcoDI GTCTC 3 cut(s) 31, 1801, 1850
BfaI CTAG 3 cut(s) 576, 933, 1864
BfmI CTRYAG 2 cut(s) 453, 1502
BfoI RGCGCY 3 cut(s) 1311, 1465, 1502
BfrI CTTAAG 2 cut(s) 908, 1691
BfuI GTATCC 1 cut(s) 1385
BisI GCNGC 5 cut(s) 453, 456, 1317, 1502, 1641
BlpI GCTNAGC 2 cut(s) 377, 1737
BlsI GCNGC 5 cut(s) 454, 457, 1318, 1503, 1642
Bme1390I CCNGG 1 cut(s) 1013
BmgT120I GGNCC 1 cut(s) 1562
BmiI GGNNCC 2 cut(s) 193, 239
BmrFI CCNGG 1 cut(s) 1013
BmrI ACTGGG 2 cut(s) 525, 961
BmsI GCATC 3 cut(s) 1235, 1762, 1774
BmuI ACTGGG 2 cut(s) 525, 961
BpiI GAAGAC 1 cut(s) 38
BplI GAGNNNNNCTC 2 cut(s) 1128, 1160
BpmI CTGGAG 1 cut(s) 657
Bpu1102I GCTNAGC 2 cut(s) 377, 1737
BpuEI CTTGAG 1 cut(s) 1742
BsaAI YACGTR 1 cut(s) 737
BsaI GGTCTC 1 cut(s) 1850
BsaJI CCNNGG 3 cut(s) 407, 867, 1012
BsaXI ACNNNNNCTCC 2 cut(s) 1152, 1182
Bsc4I CCNNNNNNNGG 3 cut(s) 437, 1207, 1776
Bse1I ACTGG 6 cut(s) 10, 341, 435, 531, 956, 1469
Bse3DI GCAATG 4 cut(s) 381, 486, 801, 1311
BseBI CCWGG 1 cut(s) 1013
BseDI CCNNGG 3 cut(s) 407, 867, 1012
BseGI GGATG 4 cut(s) 1103, 1226, 1686, 1822
BseLI CCNNNNNNNGG 3 cut(s) 437, 1207, 1776
BseMI GCAATG 4 cut(s) 381, 486, 801, 1311
BseMII CTCAG 3 cut(s) 368, 493, 1318
BseNI ACTGG 6 cut(s) 10, 341, 435, 531, 956, 1469
BseRI GAGGAG 2 cut(s) 375, 1059
BseXI GCAGC 5 cut(s) 439, 467, 1328, 1488, 1627
BseYI CCCAGC 1 cut(s) 1600
BsgI GTGCAG 1 cut(s) 1844
BshFI GGCC 4 cut(s) 441, 582, 1533, 1563
BsiHKAI GWGCWC 1 cut(s) 319
BsiSI CCGG 1 cut(s) 1419
BslI CCNNNNNNNGG 3 cut(s) 437, 1207, 1776
BsmAI GTCTC 3 cut(s) 31, 1801, 1850
BsmI GAATGC 1 cut(s) 1261
BsnI GGCC 4 cut(s) 441, 582, 1533, 1563
Bso31I GGTCTC 1 cut(s) 1850
Bsp1286I GDGCHC 1 cut(s) 319
Bsp143I GATC 7 cut(s) 559, 670, 805, 1297, 1338, 1615, 1695
Bsp1720I GCTNAGC 2 cut(s) 377, 1737
Bsp19I CCATGG 1 cut(s) 867
BspACI CCGC 3 cut(s) 1230, 1319, 1429
BspANI GGCC 4 cut(s) 441, 582, 1533, 1563
BspCNI CTCAG 3 cut(s) 369, 492, 1317
BspHI TCATGA 2 cut(s) 1074, 1404
BspLI GGNNCC 2 cut(s) 193, 239
BspMAI CTGCAG 2 cut(s) 457, 1506
BspTI CTTAAG 2 cut(s) 908, 1691
BspTNI GGTCTC 1 cut(s) 1850
BsrDI GCAATG 4 cut(s) 381, 486, 801, 1311
BsrI ACTGG 6 cut(s) 10, 341, 435, 531, 956, 1469
BssECI CCNNGG 3 cut(s) 407, 867, 1012
BssMI GATC 7 cut(s) 559, 670, 805, 1297, 1338, 1615, 1695
BssT1I CCWWGG 2 cut(s) 407, 867
Bst2UI CCWGG 1 cut(s) 1013
Bst4CI ACNGT 5 cut(s) 202, 314, 449, 508, 589
Bst6I CTCTTC 2 cut(s) 365, 1198
BstAFI CTTAAG 2 cut(s) 908, 1691
BstAPI GCANNNNNTGC 1 cut(s) 1733
BstBAI YACGTR 1 cut(s) 737
BstC8I GCNNGC 1 cut(s) 901
BstDEI CTNAG 5 cut(s) 233, 377, 479, 1304, 1737
BstDSI CCRYGG 1 cut(s) 867
BstENI CCTNNNNNAGG 1 cut(s) 1774
BstF5I GGATG 4 cut(s) 1103, 1226, 1686, 1822
BstH2I RGCGCY 3 cut(s) 1311, 1465, 1502
BstHHI GCGC 3 cut(s) 1310, 1464, 1501
BstKTI GATC 7 cut(s) 562, 673, 808, 1300, 1341, 1618, 1698
BstMAI GTCTC 3 cut(s) 31, 1801, 1850
BstMBI GATC 7 cut(s) 559, 670, 805, 1297, 1338, 1615, 1695
BstMWI GCNNNNNNNGC 6 cut(s) 611, 1046, 1150, 1316, 1649, 1733
BstNI CCWGG 1 cut(s) 1013
BstNSI RCATGY 3 cut(s) 931, 1588, 1731
BstSCI CCNGG 1 cut(s) 1011
BstSFI CTRYAG 2 cut(s) 453, 1502
BstV1I GCAGC 5 cut(s) 439, 467, 1328, 1488, 1627
BstV2I GAAGAC 1 cut(s) 38
BsuI GTATCC 1 cut(s) 1385
BsuRI GGCC 4 cut(s) 441, 582, 1533, 1563
BtgI CCRYGG 1 cut(s) 867
BtsCI GGATG 4 cut(s) 1103, 1226, 1686, 1822
BtsI GCAGTG 1 cut(s) 1856
BtsIMutI CAGTG 3 cut(s) 442, 454, 1856
Cac8I GCNNGC 1 cut(s) 901
CciI TCATGA 2 cut(s) 1074, 1404
CfoI GCGC 3 cut(s) 1310, 1464, 1501
Cfr13I GGNCC 1 cut(s) 1562
CseI GACGC 1 cut(s) 825
Csp6I GTAC 2 cut(s) 811, 837
CspCI CAANNNNNGTGG 2 cut(s) 1607, 1642
CviQI GTAC 2 cut(s) 811, 837
DdeI CTNAG 5 cut(s) 233, 377, 479, 1304, 1737
DpnI GATC 7 cut(s) 561, 672, 807, 1299, 1340, 1617, 1697
DpnII GATC 7 cut(s) 559, 670, 805, 1297, 1338, 1615, 1695
DrdI GACNNNNNNGTC 1 cut(s) 1084
DseDI GACNNNNNNGTC 1 cut(s) 1084
EaeI YGGCCR 2 cut(s) 580, 1531
Eam1104I CTCTTC 2 cut(s) 365, 1198
EarI CTCTTC 2 cut(s) 365, 1198
Eco130I CCWWGG 2 cut(s) 407, 867
Eco31I GGTCTC 1 cut(s) 1850
Eco32I GATATC 1 cut(s) 113
Eco57I CTGAAG 1 cut(s) 1769
EcoNI CCTNNNNNAGG 1 cut(s) 1774
EcoRII CCWGG 1 cut(s) 1011
EcoRV GATATC 1 cut(s) 113
EcoT14I CCWWGG 2 cut(s) 407, 867
ErhI CCWWGG 2 cut(s) 407, 867
FalI AAGNNNNNCTT 6 cut(s) 649, 681, 783, 815, 1033, 1065
FbaI TGATCA 3 cut(s) 670, 805, 1338
FblI GTMKAC 1 cut(s) 969
Fnu4HI GCNGC 5 cut(s) 453, 456, 1317, 1502, 1641
FokI GGATG 4 cut(s) 1090, 1213, 1673, 1809
Fsp4HI GCNGC 5 cut(s) 453, 456, 1317, 1502, 1641
FspBI CTAG 3 cut(s) 576, 933, 1864
GlaI GCGC 3 cut(s) 1309, 1463, 1500
GluI GCNGC 5 cut(s) 453, 456, 1317, 1502, 1641
GsaI CCCAGC 1 cut(s) 1604
GsuI CTGGAG 1 cut(s) 657
HaeII RGCGCY 3 cut(s) 1311, 1465, 1502
HaeIII GGCC 4 cut(s) 441, 582, 1533, 1563
HapII CCGG 1 cut(s) 1419
HgaI GACGC 1 cut(s) 825
HhaI GCGC 3 cut(s) 1310, 1464, 1501
Hin6I GCGC 3 cut(s) 1308, 1462, 1499
HinP1I GCGC 3 cut(s) 1308, 1462, 1499
HinfI GANTC 7 cut(s) 520, 843, 850, 960, 1401, 1422, 1544
HpaII CCGG 1 cut(s) 1419
HphI GGTGA 2 cut(s) 967, 1704
Hpy166II GTNNAC 2 cut(s) 886, 970
Hpy188III TCNNGA 9 cut(s) 206, 422, 847, 854, 1075, 1405, 1759, 1777, 1838
Hpy8I GTNNAC 2 cut(s) 886, 970
Hpy99I CGWCG 1 cut(s) 707
HpyAV CCTTC 7 cut(s) 675, 1117, 1117, 1207, 1454, 1809, 1835
HpyCH4III ACNGT 5 cut(s) 202, 314, 449, 508, 589
HpyCH4IV ACGT 1 cut(s) 736
HpyF10VI GCNNNNNNNGC 6 cut(s) 611, 1046, 1150, 1316, 1649, 1733
HpyF3I CTNAG 5 cut(s) 233, 377, 479, 1304, 1737
HpySE526I ACGT 1 cut(s) 736
HspAI GCGC 3 cut(s) 1308, 1462, 1499
Ksp22I TGATCA 3 cut(s) 670, 805, 1338
Kzo9I GATC 7 cut(s) 559, 670, 805, 1297, 1338, 1615, 1695
LmnI GCTCC 4 cut(s) 243, 1046, 1334, 1385
Lsp1109I GCAGC 5 cut(s) 439, 467, 1328, 1488, 1627
LweI GCATC 3 cut(s) 1235, 1762, 1774
MaeI CTAG 3 cut(s) 576, 933, 1864
MaeII ACGT 1 cut(s) 736
MaeIII GTNAC 2 cut(s) 166, 709
MalI GATC 7 cut(s) 561, 672, 807, 1299, 1340, 1617, 1697
MboI GATC 7 cut(s) 559, 670, 805, 1297, 1338, 1615, 1695
MfeI CAATTG 1 cut(s) 1221
MhlI GDGCHC 1 cut(s) 319
MlsI TGGCCA 1 cut(s) 582
MluNI TGGCCA 1 cut(s) 582
MmeI TCCRAC 1 cut(s) 1299
Mox20I TGGCCA 1 cut(s) 582
MroXI GAANNNNTTC 1 cut(s) 664
MscI TGGCCA 1 cut(s) 582
MseI TTAA 7 cut(s) 21, 279, 690, 764, 909, 1367, 1692
MslI CAYNNNNRTG 1 cut(s) 1409
Msp20I TGGCCA 1 cut(s) 582
MspA1I CMGCKG 2 cut(s) 899, 1319
MspCI CTTAAG 2 cut(s) 908, 1691
MspI CCGG 1 cut(s) 1419
MspR9I CCNGG 1 cut(s) 1013
MunI CAATTG 1 cut(s) 1221
Mva1269I GAATGC 1 cut(s) 1261
MvaI CCWGG 1 cut(s) 1013
MwoI GCNNNNNNNGC 6 cut(s) 611, 1046, 1150, 1316, 1649, 1733
NcoI CCATGG 1 cut(s) 867
NdeII GATC 7 cut(s) 559, 670, 805, 1297, 1338, 1615, 1695
NlaIV GGNNCC 2 cut(s) 193, 239
NmeAIII GCCGAG 1 cut(s) 203
NmuCI GTSAC 2 cut(s) 166, 709
NspI RCATGY 3 cut(s) 931, 1588, 1731
PagI TCATGA 2 cut(s) 1074, 1404
PciI ACATGT 1 cut(s) 927
PctI GAATGC 1 cut(s) 1261
PdmI GAANNNNTTC 1 cut(s) 664
PfeI GAWTC 7 cut(s) 520, 843, 850, 960, 1401, 1422, 1544
PflFI GACNNNGTC 1 cut(s) 707
PkrI GCNGC 5 cut(s) 454, 457, 1318, 1503, 1642
Ppu21I YACGTR 1 cut(s) 737
PscI ACATGT 1 cut(s) 927
PshBI ATTAAT 1 cut(s) 690
Psp6I CCWGG 1 cut(s) 1011
PspFI CCCAGC 1 cut(s) 1600
PspGI CCWGG 1 cut(s) 1011
PspN4I GGNNCC 2 cut(s) 193, 239
PspPI GGNCC 1 cut(s) 1562
PsrI GAACNNNNNNTAC 2 cut(s) 51, 83
PstI CTGCAG 2 cut(s) 457, 1506
PsyI GACNNNGTC 1 cut(s) 707
PvuII CAGCTG 1 cut(s) 899
RsaI GTAC 2 cut(s) 812, 838
RsaNI GTAC 2 cut(s) 811, 837
RseI CAYNNNNRTG 1 cut(s) 1409
SaqAI TTAA 7 cut(s) 21, 279, 690, 764, 909, 1367, 1692
SatI GCNGC 5 cut(s) 453, 456, 1317, 1502, 1641
Sau3AI GATC 7 cut(s) 559, 670, 805, 1297, 1338, 1615, 1695
Sau96I GGNCC 1 cut(s) 1562
ScrFI CCNGG 1 cut(s) 1013
SduI GDGCHC 1 cut(s) 319
SfaNI GCATC 3 cut(s) 1235, 1762, 1774
SfcI CTRYAG 2 cut(s) 453, 1502
SmiMI CAYNNNNRTG 1 cut(s) 1409
SmlI CTYRAG 3 cut(s) 908, 1691, 1757
SmoI CTYRAG 3 cut(s) 908, 1691, 1757
SsiI CCGC 3 cut(s) 1230, 1319, 1429
SspI AATATT 1 cut(s) 1035
SspMI CTAG 3 cut(s) 576, 933, 1864
StyD4I CCNGG 1 cut(s) 1011
StyI CCWWGG 2 cut(s) 407, 867
TaaI ACNGT 5 cut(s) 202, 314, 449, 508, 589
TaiI ACGT 1 cut(s) 739
TatI WGTACW 2 cut(s) 810, 836
TfiI GAWTC 7 cut(s) 520, 843, 850, 960, 1401, 1422, 1544
Tru1I TTAA 7 cut(s) 21, 279, 690, 764, 909, 1367, 1692
Tru9I TTAA 7 cut(s) 21, 279, 690, 764, 909, 1367, 1692
TscAI CASTG 3 cut(s) 442, 454, 1863
TseFI GTSAC 2 cut(s) 166, 709
TseI GCWGC 5 cut(s) 452, 455, 1316, 1501, 1640
Tsp45I GTSAC 2 cut(s) 166, 709
TspGWI ACGGA 1 cut(s) 1536
TspRI CASTG 3 cut(s) 442, 454, 1863
Tth111I GACNNNGTC 1 cut(s) 707
Vha464I CTTAAG 2 cut(s) 908, 1691
VspI ATTAAT 1 cut(s) 690
XagI CCTNNNNNAGG 1 cut(s) 1774
XapI RAATTY 2 cut(s) 152, 1183
XceI RCATGY 3 cut(s) 931, 1588, 1731
XmiI GTMKAC 1 cut(s) 969
XmnI GAANNNNTTC 1 cut(s) 664
XspI CTAG 3 cut(s) 576, 933, 1864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.