Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003317

Physical Location & Seq

Genomic Coordinates Forward (+)

54555802 .. 54563528

Gene Structure 7727 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034787

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGAGTTAGAGGAATATAGTGGAGCTGGTTCGGTAAAATCTTCAGATATAAGTGGTGATGGTGGTGGCGGAAGAAGAGATGGTGAAGGTGGCAATAATGGCTTGATGTATTTGGTGTGGGAAGATGTGAGTGTTGTGCTTCCAAACTTTGGGATTGGAAACAGCAGTAATGGAGGACACACCAGAAGATTGCTTGATGGCCTCACTGGTTTTGCTGAGCCTGGTAGGATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCAACCCTTCTTGATGCTTTAGCAGGTAGACTGTCACGAAATGTTGTCATGACTGGAAATGTTCTTCTTAATGGGAAGAAGACGAGACTTGACTATGGTGTCGCTGCTTATGTGACCCAAGAAAATGTGCTGTTGGGAACCCTAACAGTACGAGAAACCATAACTTACTCGGCTCATCTGAGGCTCCCAACTAGTCTGACCAAACAAGAGGTCAATGACATTGTTGATGCCACAATTACCGATATGGGTCTGCAAGACTGTGCTCACAGGCTTGTCGGAAACTGGCATTTGAGGGGCATAAGTGGAGGAGAGAAGAAGAGGCTGAGCATTGCACTCGAAATACTCACAAAGCCAAGGTTGTTGTTTCTCGATGAGCCTACCAGTGGCCTCGACAGTGCTGCAGCTTTCTTCGTAGTTCAAACCCTCAGATATATTGCTAAAGATGGCAGAACTGTCATTTCTTCGATTCATCAGCCCAGTAGTGAAGTGTTTGCTTTGTTTGATGATCTTGTTCTGCTTTCTAGTGGCCAAACAGTTTATTCTGGTCAAGCAAAAATGGCGGTAGAGTTCTTTGCTAAAGCTGGAGTTCCATGCCCAAGTCGAAGAAACCCTTCTGATCACTTTCTTCGTTGTATTAATTCAGACTTCGACGAAGTCACAATGAACACCTCTCAAAAAATACGTGAAATCCCAAAATCATCAGAACCTTTAATGAACTTTGCAACAGCAGAGATAAAAGCAATGCTTGTTGATCAGTACAGACGCTCGGAGTATGCAATAAGCACAAGAATCAGGATTCGAGAAATATCGTCCATGGAAGGACTTGGGGTAGAAAAGAGGAGTGGAAGCCAAGCAAAGTGGTGGAAGCAACTCTCAATATTGACACAGAGGTCTTTCCTCAACATGTCTAGGGATATGGGGTATTACTGGGTGAGAATCATCATCTACGTACTTTTATCTCTTTGCGTTGGTACAATTTTCTATGACCTGGGAACAAATTACACTTCAATACTTGCAAGAGGAGCTTGTGCTGGATTTATTTCTGGCTTCATGACTTTCATGTCCATTGGAGGCTTCCCATCCTTCCTTGAAGAAATGAAGGTTTTTCATAGAGAAAGGCTCAATGGGCATTATGGAGTTGCTGTCTTTACTCTGTCAAATTTCCTCTCTTCCTTCCCATTCTTGGCTTTGATGTCAATTGCATCCGCAACTATAACTTACTACATGGTGGAAAAGCATTCTCATTTCTCCGACTATGTGTTCATGTGCCTTGATCTTCTCAGCGCCATTGCAGCGGTAGAAAGCTCCATGATGATCATAGCTTCTCTTGTTCCGAACTACTTAATGGGAGTAATTATTGGAGCAGGATACTTGGGAATCATGATGATGACTGCCGGATTCTTCCGCTTCATGCCTGACCTTCCCAAACCCGTTTGGCGCTATCCAATTTCCTATCTGAACTATGGTGCATGGGCGCTGCAGGGAGAATACAAGAACGGATTGATTGGCCGTGAGTTTGATTCTCTTACACCCAATGGCCCAAAGCTGAAAGGCGAGGACATACTCAAAACTCTGCTGGGTATTCAACCAGATCAATCAAAGTGGTGGGATTTGGCTGCTGTCTGTGCCATTATTGTATCCTTCAGATTTATTTTCTTCATCATCCTTAAGATCAAAGAGAGAGCTTCACCTCTTTTCCGAGCATGTTATGCTAAGCAAACTCTGAAGCATCTCAAGAAGCGACCCTCATTCAGGAAAGATGGAACTCTTTTCCCTTCCATGAGACATCAACCTTTCCATCCCTTGTCTTTTCAAGAAGAGTCATCAGGACGCAGAGCAAGTGATTACGGGGTGAAAGATTTTGGAATTGATCAAATCAACCAGTTTACATGCCGTGGAAAACTGAAGTTATCTCAAAGAAAGACTTGGCAAGAGTGTAGCTGGAAGTATCAAAGAGTGAGTTCAGAGTATGGCATAGGAATGGAGGTGTCAGCAAGTGGCGACATCTATAGCTATGAAATCCTGCTATTTGAGATAGCTGTGAGTCTTCTAGCCATCCCGGTGAGCCAGCTTTTGAGCAAGCACTTGGAGCCTATTATTGAAGAGGAGCTTTTGAACGAGCACATGGACACTATTGAAGAGTGTAAGACTCGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008150 GO:0009506 GO:0009628 GO:0009651 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944 GO:0080051 GO:0080167 GO:0080172

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

808

Amino Acids

90.06

Weight (kDa)

8.53

Isoelectric Point (pI)

39.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	71 - 216	1.4e-24	ABC transporter
AAA_29	PF13555	75 - 96	9.3e-06	P-loop containing region of AAA domain
ABC2_membrane_7	PF19055	245 - 302	1.7e-11	ABC-2 type transporter
ABC2_membrane	PF01061	378 - 583	2.3e-36	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51460
fragaria_vesca	FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480
malus_domestica	MD00G1192100.v1.1 MD03G1172300.v1.1
prunus_persica	Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1
pyrus_communis	pycom03g12950
rosa_chinensis	RchiOBHm_Chr5g0052851 RchiOBHm_Chr5g0052971
rosa_laevigata	RLG00000034787
rosa_multiflora	Rmu_sc0006729.1_g000004 Rmu_ssc0000311.1_g000005 Rmu_ssc0000311.1_g000013
rosa_roxburghii	Rroxscaffold_1G00027600 Rroxscaffold_1G00028670 Rroxscaffold_1G00028720 Rroxscaffold_1G00028730
rosa_rugosa	Rorug05G0269000
rosa_samantha	Rh5BG352000 Rh5CG378600 Rh5DG368300
rosa_wichuraiana	Rw5G032170 Rw5G032180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	362, 1153, 1324
Acc36I	ACCTGC	1 cut(s)	278
AccB7I	CCANNNNNTGG	1 cut(s)	149
AccI	GTMKAC	1 cut(s)	292
AciI	CCGC	5 cut(s)	69, 824, 1470, 1559, 1669
AclWI	GGATC	1 cut(s)	236
AcoI	YGGCCR	2 cut(s)	790, 1771
AcsI	RAATTY	1 cut(s)	1423
AcuI	CTGAAG	4 cut(s)	27, 1891, 2009, 2189
AfaI	GTAC	4 cut(s)	414, 1022, 1215, 1237
AfiI	CCNNNNNNNGG	4 cut(s)	149, 647, 1447, 2016
AflII	CTTAAG	1 cut(s)	1931
AflIII	ACRYGT	1 cut(s)	1167
AgsI	TTSAA	8 cut(s)	683, 1272, 1355, 1850, 2078, 2366, 2380, 2402
AhlI	ACTAGT	1 cut(s)	455
AjnI	CCWGG	2 cut(s)	220, 1251
Alw21I	GWGCWC	2 cut(s)	529, 2388
Alw26I	GTCTC	2 cut(s)	343, 2041
AlwI	GGATC	1 cut(s)	236
AoxI	GGCC	5 cut(s)	199, 649, 790, 1771, 1801
ApeKI	GCWGC	6 cut(s)	368, 662, 665, 1556, 1741, 1880
ApoI	RAATTY	1 cut(s)	1423
ArsI	GACNNNNNNTTYG	2 cut(s)	459, 491
AseI	ATTAAT	1 cut(s)	900
Asp700I	GAANNNNTTC	1 cut(s)	874
AspLEI	GCGC	3 cut(s)	1550, 1704, 1741
AspS9I	GGNCC	2 cut(s)	245, 1802
AsuC2I	CCSGG	1 cut(s)	2324
AsuHPI	GGTGA	6 cut(s)	68, 95, 1207, 1944, 2128, 2338
AvaII	GGWCC	1 cut(s)	245
BalI	TGGCCA	1 cut(s)	792
BbsI	GAAGAC	2 cut(s)	350, 2303
Bbv12I	GWGCWC	2 cut(s)	529, 2388
BbvI	GCAGC	6 cut(s)	355, 649, 677, 1568, 1728, 1867
BccI	CCATC	8 cut(s)	53, 74, 191, 701, 1351, 2018, 2070, 2327
BceAI	ACGGC	2 cut(s)	1758, 2142
BcgI	CGANNNNNNTGC	4 cut(s)	580, 614, 644, 678
BciT130I	CCWGG	2 cut(s)	222, 1253
BciVI	GTATCC	2 cut(s)	1625, 1912
BclI	TGATCA	4 cut(s)	880, 1015, 1578, 2134
BcnI	CCSGG	1 cut(s)	2324
BcoDI	GTCTC	2 cut(s)	343, 2041
BcuI	ACTAGT	1 cut(s)	455
BfaI	CTAG	4 cut(s)	456, 786, 1173, 2315
BfmI	CTRYAG	3 cut(s)	663, 1742, 2272
BfoI	RGCGCY	3 cut(s)	1551, 1705, 1742
BfrI	CTTAAG	1 cut(s)	1931
BfuAI	ACCTGC	1 cut(s)	278
BfuI	GTATCC	2 cut(s)	1625, 1912
BisI	GCNGC	6 cut(s)	369, 663, 666, 1557, 1742, 1881
BlpI	GCTNAGC	3 cut(s)	216, 587, 1977
BlsI	GCNGC	6 cut(s)	370, 664, 667, 1558, 1743, 1882
Bme1390I	CCNGG	3 cut(s)	222, 1253, 2324
Bme18I	GGWCC	1 cut(s)	245
BmgT120I	GGNCC	2 cut(s)	245, 1802
BmiI	GGNNCC	4 cut(s)	246, 403, 449, 2355
BmrFI	CCNGG	3 cut(s)	222, 1253, 2324
BmrI	ACTGGG	2 cut(s)	735, 1201
BmsI	GCATC	4 cut(s)	268, 481, 1475, 2002
BmuI	ACTGGG	2 cut(s)	735, 1201
BpiI	GAAGAC	2 cut(s)	350, 2303
BplI	GAGNNNNNCTC	2 cut(s)	1368, 1400
BpmI	CTGGAG	1 cut(s)	867
Bpu1102I	GCTNAGC	3 cut(s)	216, 587, 1977
BpuEI	CTTGAG	1 cut(s)	1982
BpuMI	CCSGG	1 cut(s)	2324
BsaAI	YACGTR	2 cut(s)	947, 1213
BsaJI	CCNNGG	4 cut(s)	617, 1077, 1252, 2158
BsaXI	ACNNNNNCTCC	2 cut(s)	1392, 1422
Bsc4I	CCNNNNNNNGG	4 cut(s)	149, 647, 1447, 2016
Bse1I	ACTGG	7 cut(s)	211, 322, 551, 645, 741, 1196, 2146
Bse3DI	GCAATG	3 cut(s)	591, 1011, 1551
BseBI	CCWGG	2 cut(s)	222, 1253
BseDI	CCNNGG	4 cut(s)	617, 1077, 1252, 2158
BseGI	GGATG	5 cut(s)	1343, 1466, 1926, 2062, 2319
BseLI	CCNNNNNNNGG	4 cut(s)	149, 647, 1447, 2016
BseMI	GCAATG	3 cut(s)	591, 1011, 1551
BseMII	CTCAG	5 cut(s)	207, 434, 578, 703, 1558
BseNI	ACTGG	7 cut(s)	211, 322, 551, 645, 741, 1196, 2146
BseRI	GAGGAG	4 cut(s)	585, 1117, 1299, 2384
BseXI	GCAGC	6 cut(s)	355, 649, 677, 1568, 1728, 1867
BseYI	CCCAGC	1 cut(s)	1840
BshFI	GGCC	5 cut(s)	201, 651, 792, 1773, 1803
BsiHKAI	GWGCWC	2 cut(s)	529, 2388
BsiSI	CCGG	2 cut(s)	1659, 2324
BslI	CCNNNNNNNGG	4 cut(s)	149, 647, 1447, 2016
BsmAI	GTCTC	2 cut(s)	343, 2041
BsmI	GAATGC	1 cut(s)	1501
BsnI	GGCC	5 cut(s)	201, 651, 792, 1773, 1803
Bsp1286I	GDGCHC	2 cut(s)	529, 2388
Bsp143I	GATC	9 cut(s)	228, 769, 880, 1015, 1537, 1578, 1855, 1935, 2134
Bsp1720I	GCTNAGC	3 cut(s)	216, 587, 1977
Bsp19I	CCATGG	1 cut(s)	1077
BspACI	CCGC	5 cut(s)	69, 824, 1470, 1559, 1669
BspANI	GGCC	5 cut(s)	201, 651, 792, 1773, 1803
BspCNI	CTCAG	5 cut(s)	208, 435, 579, 702, 1557
BspHI	TCATGA	3 cut(s)	312, 1314, 1644
BspLI	GGNNCC	4 cut(s)	246, 403, 449, 2355
BspMAI	CTGCAG	2 cut(s)	667, 1746
BspMI	ACCTGC	1 cut(s)	278
BspPI	GGATC	1 cut(s)	236
BspTI	CTTAAG	1 cut(s)	1931
BsrDI	GCAATG	3 cut(s)	591, 1011, 1551
BsrI	ACTGG	7 cut(s)	211, 322, 551, 645, 741, 1196, 2146
BssECI	CCNNGG	4 cut(s)	617, 1077, 1252, 2158
BssMI	GATC	9 cut(s)	228, 769, 880, 1015, 1537, 1578, 1855, 1935, 2134
BssT1I	CCWWGG	2 cut(s)	617, 1077
Bst2UI	CCWGG	2 cut(s)	222, 1253
Bst4CI	ACNGT	6 cut(s)	297, 412, 524, 659, 718, 799
Bst6I	CTCTTC	6 cut(s)	70, 575, 1438, 2076, 2361, 2397
BstAFI	CTTAAG	1 cut(s)	1931
BstAPI	GCANNNNNTGC	1 cut(s)	1973
BstBAI	YACGTR	2 cut(s)	947, 1213
BstC8I	GCNNGC	2 cut(s)	2333, 2345
BstDEI	CTNAG	6 cut(s)	216, 443, 587, 689, 1544, 1977
BstDSI	CCRYGG	2 cut(s)	1077, 2158
BstENI	CCTNNNNNAGG	1 cut(s)	2014
BstF5I	GGATG	5 cut(s)	1343, 1466, 1926, 2062, 2319
BstH2I	RGCGCY	3 cut(s)	1551, 1705, 1742
BstHHI	GCGC	3 cut(s)	1550, 1704, 1741
BstKTI	GATC	9 cut(s)	231, 772, 883, 1018, 1540, 1581, 1858, 1938, 2137
BstMAI	GTCTC	2 cut(s)	343, 2041
BstMBI	GATC	9 cut(s)	228, 769, 880, 1015, 1537, 1578, 1855, 1935, 2134
BstMWI	GCNNNNNNNGC	8 cut(s)	99, 821, 1286, 1390, 1556, 1889, 1973, 2353
BstNI	CCWGG	2 cut(s)	222, 1253
BstNSI	RCATGY	3 cut(s)	1171, 1971, 2157
BstSCI	CCNGG	3 cut(s)	220, 1251, 2322
BstSFI	CTRYAG	3 cut(s)	663, 1742, 2272
BstSNI	TACGTA	1 cut(s)	1213
BstV1I	GCAGC	6 cut(s)	355, 649, 677, 1568, 1728, 1867
BstV2I	GAAGAC	2 cut(s)	350, 2303
BsuI	GTATCC	2 cut(s)	1625, 1912
BsuRI	GGCC	5 cut(s)	201, 651, 792, 1773, 1803
BtgI	CCRYGG	2 cut(s)	1077, 2158
BtsCI	GGATG	5 cut(s)	1343, 1466, 1926, 2062, 2319
BtsIMutI	CAGTG	3 cut(s)	204, 652, 664
BveI	ACCTGC	1 cut(s)	278
Cac8I	GCNNGC	2 cut(s)	2333, 2345
CciI	TCATGA	3 cut(s)	312, 1314, 1644
CfoI	GCGC	3 cut(s)	1550, 1704, 1741
Cfr13I	GGNCC	2 cut(s)	245, 1802
CseI	GACGC	2 cut(s)	1035, 2103
Csp6I	GTAC	4 cut(s)	413, 1021, 1214, 1236
CspCI	CAANNNNNGTGG	4 cut(s)	1103, 1138, 1847, 1882
CviQI	GTAC	4 cut(s)	413, 1021, 1214, 1236
DdeI	CTNAG	6 cut(s)	216, 443, 587, 689, 1544, 1977
DpnI	GATC	9 cut(s)	230, 771, 882, 1017, 1539, 1580, 1857, 1937, 2136
DpnII	GATC	9 cut(s)	228, 769, 880, 1015, 1537, 1578, 1855, 1935, 2134
DrdI	GACNNNNNNGTC	3 cut(s)	362, 1153, 1324
DseDI	GACNNNNNNGTC	3 cut(s)	362, 1153, 1324
EaeI	YGGCCR	2 cut(s)	790, 1771
Eam1104I	CTCTTC	6 cut(s)	70, 575, 1438, 2076, 2361, 2397
EarI	CTCTTC	6 cut(s)	70, 575, 1438, 2076, 2361, 2397
EciI	GGCGGA	1 cut(s)	84
Eco105I	TACGTA	1 cut(s)	1213
Eco130I	CCWWGG	2 cut(s)	617, 1077
Eco47I	GGWCC	1 cut(s)	245
Eco57I	CTGAAG	4 cut(s)	27, 1891, 2009, 2189
EcoNI	CCTNNNNNAGG	1 cut(s)	2014
EcoO109I	RGGNCCY	1 cut(s)	245
EcoRII	CCWGG	2 cut(s)	220, 1251
EcoT14I	CCWWGG	2 cut(s)	617, 1077
ErhI	CCWWGG	2 cut(s)	617, 1077
FbaI	TGATCA	4 cut(s)	880, 1015, 1578, 2134
FblI	GTMKAC	1 cut(s)	292
Fnu4HI	GCNGC	6 cut(s)	369, 663, 666, 1557, 1742, 1881
FokI	GGATG	5 cut(s)	1330, 1453, 1913, 2049, 2306
Fsp4HI	GCNGC	6 cut(s)	369, 663, 666, 1557, 1742, 1881
FspBI	CTAG	4 cut(s)	456, 786, 1173, 2315
GlaI	GCGC	3 cut(s)	1549, 1703, 1740
GluI	GCNGC	6 cut(s)	369, 663, 666, 1557, 1742, 1881
GsaI	CCCAGC	1 cut(s)	1844
GsuI	CTGGAG	1 cut(s)	867
HaeII	RGCGCY	3 cut(s)	1551, 1705, 1742
HaeIII	GGCC	5 cut(s)	201, 651, 792, 1773, 1803
HapII	CCGG	2 cut(s)	1659, 2324
HgaI	GACGC	2 cut(s)	1035, 2103
HhaI	GCGC	3 cut(s)	1550, 1704, 1741
Hin6I	GCGC	3 cut(s)	1548, 1702, 1739
HinP1I	GCGC	3 cut(s)	1548, 1702, 1739
HpaII	CCGG	2 cut(s)	1659, 2324
HphI	GGTGA	6 cut(s)	68, 95, 1207, 1944, 2128, 2338
Hpy166II	GTNNAC	2 cut(s)	293, 2151
Hpy8I	GTNNAC	2 cut(s)	293, 2151
Hpy99I	CGWCG	1 cut(s)	917
HpyCH4III	ACNGT	6 cut(s)	297, 412, 524, 659, 718, 799
HpyCH4IV	ACGT	2 cut(s)	946, 1212
HpyF10VI	GCNNNNNNNGC	8 cut(s)	99, 821, 1286, 1390, 1556, 1889, 1973, 2353
HpyF3I	CTNAG	6 cut(s)	216, 443, 587, 689, 1544, 1977
HpySE526I	ACGT	2 cut(s)	946, 1212
HspAI	GCGC	3 cut(s)	1548, 1702, 1739
Ksp22I	TGATCA	4 cut(s)	880, 1015, 1578, 2134
Kzo9I	GATC	9 cut(s)	228, 769, 880, 1015, 1537, 1578, 1855, 1935, 2134
LmnI	GCTCC	7 cut(s)	23, 453, 1286, 1574, 1625, 2353, 2371
Lsp1109I	GCAGC	6 cut(s)	355, 649, 677, 1568, 1728, 1867
LweI	GCATC	4 cut(s)	268, 481, 1475, 2002
MaeI	CTAG	4 cut(s)	456, 786, 1173, 2315
MaeII	ACGT	2 cut(s)	946, 1212
MaeIII	GTNAC	3 cut(s)	297, 376, 919
MalI	GATC	9 cut(s)	230, 771, 882, 1017, 1539, 1580, 1857, 1937, 2136
MboI	GATC	9 cut(s)	228, 769, 880, 1015, 1537, 1578, 1855, 1935, 2134
MfeI	CAATTG	1 cut(s)	1461
MhlI	GDGCHC	2 cut(s)	529, 2388
MlsI	TGGCCA	1 cut(s)	792
MluCI	AATT	9 cut(s)	498, 901, 1239, 1261, 1423, 1461, 1617, 1710, 2130
MluNI	TGGCCA	1 cut(s)	792
MlyI	GAGTC	3 cut(s)	2093, 2317, 2407
MmeI	TCCRAC	2 cut(s)	520, 1539
Mox20I	TGGCCA	1 cut(s)	792
MroXI	GAANNNNTTC	1 cut(s)	874
MscI	TGGCCA	1 cut(s)	792
MseI	TTAA	5 cut(s)	333, 900, 974, 1607, 1932
MslI	CAYNNNNRTG	3 cut(s)	1649, 2243, 2324
Msp20I	TGGCCA	1 cut(s)	792
MspA1I	CMGCKG	1 cut(s)	1559
MspCI	CTTAAG	1 cut(s)	1931
MspI	CCGG	2 cut(s)	1659, 2324
MspR9I	CCNGG	3 cut(s)	222, 1253, 2324
MunI	CAATTG	1 cut(s)	1461
Mva1269I	GAATGC	1 cut(s)	1501
MvaI	CCWGG	2 cut(s)	222, 1253
MwoI	GCNNNNNNNGC	8 cut(s)	99, 821, 1286, 1390, 1556, 1889, 1973, 2353
NciI	CCSGG	1 cut(s)	2324
NcoI	CCATGG	1 cut(s)	1077
NdeII	GATC	9 cut(s)	228, 769, 880, 1015, 1537, 1578, 1855, 1935, 2134
NlaIV	GGNNCC	4 cut(s)	246, 403, 449, 2355
NmeAIII	GCCGAG	2 cut(s)	413, 2395
NmuCI	GTSAC	3 cut(s)	297, 376, 919
NspI	RCATGY	3 cut(s)	1171, 1971, 2157
PagI	TCATGA	3 cut(s)	312, 1314, 1644
PciI	ACATGT	1 cut(s)	1167
PctI	GAATGC	1 cut(s)	1501
PdmI	GAANNNNTTC	1 cut(s)	874
PfeI	GAWTC	7 cut(s)	730, 1053, 1060, 1200, 1641, 1662, 1784
PflFI	GACNNNGTC	1 cut(s)	917
PflMI	CCANNNNNTGG	1 cut(s)	149
PkrI	GCNGC	6 cut(s)	370, 664, 667, 1558, 1743, 1882
PleI	GAGTC	3 cut(s)	2092, 2316, 2407
PpsI	GAGTC	3 cut(s)	2092, 2316, 2407
Ppu21I	YACGTR	2 cut(s)	947, 1213
PpuMI	RGGWCCY	1 cut(s)	245
PscI	ACATGT	1 cut(s)	1167
PshBI	ATTAAT	1 cut(s)	900
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	2 cut(s)	220, 1251
PspFI	CCCAGC	1 cut(s)	1840
PspGI	CCWGG	2 cut(s)	220, 1251
PspN4I	GGNNCC	4 cut(s)	246, 403, 449, 2355
PspPI	GGNCC	2 cut(s)	245, 1802
PspPPI	RGGWCCY	1 cut(s)	245
PstI	CTGCAG	2 cut(s)	667, 1746
PsyI	GACNNNGTC	1 cut(s)	917
RsaI	GTAC	4 cut(s)	414, 1022, 1215, 1237
RsaNI	GTAC	4 cut(s)	413, 1021, 1214, 1236
RseI	CAYNNNNRTG	3 cut(s)	1649, 2243, 2324
SaqAI	TTAA	5 cut(s)	333, 900, 974, 1607, 1932
SatI	GCNGC	6 cut(s)	369, 663, 666, 1557, 1742, 1881
Sau3AI	GATC	9 cut(s)	228, 769, 880, 1015, 1537, 1578, 1855, 1935, 2134
Sau96I	GGNCC	2 cut(s)	245, 1802
SchI	GAGTC	3 cut(s)	2093, 2317, 2407
ScrFI	CCNGG	3 cut(s)	222, 1253, 2324
SduI	GDGCHC	2 cut(s)	529, 2388
SfaNI	GCATC	4 cut(s)	268, 481, 1475, 2002
SfcI	CTRYAG	3 cut(s)	663, 1742, 2272
SinI	GGWCC	1 cut(s)	245
SmiMI	CAYNNNNRTG	3 cut(s)	1649, 2243, 2324
SmlI	CTYRAG	2 cut(s)	1931, 1997
SmoI	CTYRAG	2 cut(s)	1931, 1997
SnaBI	TACGTA	1 cut(s)	1213
SpeI	ACTAGT	1 cut(s)	455
Sse9I	AATT	9 cut(s)	498, 901, 1239, 1261, 1423, 1461, 1617, 1710, 2130
SsiI	CCGC	5 cut(s)	69, 824, 1470, 1559, 1669
SspI	AATATT	1 cut(s)	1143
SspMI	CTAG	4 cut(s)	456, 786, 1173, 2315
StyD4I	CCNGG	3 cut(s)	220, 1251, 2322
StyI	CCWWGG	2 cut(s)	617, 1077
TaaI	ACNGT	6 cut(s)	297, 412, 524, 659, 718, 799
TaiI	ACGT	2 cut(s)	949, 1215
TaqI	TCGA	7 cut(s)	600, 633, 654, 728, 865, 912, 1063
TasI	AATT	9 cut(s)	498, 901, 1239, 1261, 1423, 1461, 1617, 1710, 2130
TatI	WGTACW	1 cut(s)	1020
TfiI	GAWTC	7 cut(s)	730, 1053, 1060, 1200, 1641, 1662, 1784
Tru1I	TTAA	5 cut(s)	333, 900, 974, 1607, 1932
Tru9I	TTAA	5 cut(s)	333, 900, 974, 1607, 1932
TscAI	CASTG	3 cut(s)	211, 652, 664
TseFI	GTSAC	3 cut(s)	297, 376, 919
TseI	GCWGC	6 cut(s)	368, 662, 665, 1556, 1741, 1880
Tsp45I	GTSAC	3 cut(s)	297, 376, 919
TspGWI	ACGGA	1 cut(s)	1776
TspRI	CASTG	3 cut(s)	211, 652, 664
Tth111I	GACNNNGTC	1 cut(s)	917
Van91I	CCANNNNNTGG	1 cut(s)	149
Vha464I	CTTAAG	1 cut(s)	1931
VpaK11BI	GGWCC	1 cut(s)	245
VspI	ATTAAT	1 cut(s)	900
XagI	CCTNNNNNAGG	1 cut(s)	2014
XapI	RAATTY	1 cut(s)	1423
XceI	RCATGY	3 cut(s)	1171, 1971, 2157
XmiI	GTMKAC	1 cut(s)	292
XmnI	GAANNNNTTC	1 cut(s)	874
XspI	CTAG	4 cut(s)	456, 786, 1173, 2315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.