Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003317

Physical Location & Seq

Genomic Coordinates Reverse (-)

36712025 .. 36716611

Gene Structure 4587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00028720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGAGCGACCGGCGAGCCCGTTTCGAGCTCAACCAAAGAAACCCGAGGTCGTGCCGACGTCGTCGAGCCGCAATTTCCGGCCGGGTCGTGCTTCATACGACCGTTCATCCTTGCGGCGCCGCCGTGGGCTTGAATCGTCGGCGGCGACCACCACGGGACGATCGGAAGGAAGAGGCGACCCCGCCGGTGAAGTTTCGTCGCGGAGGTGGCCGAGCCGGAAGTTACGGGCGGGTAGACTGTCACGAAATGTTATCATGACTGGAAATGTTCTTCTTAATGGGAACAAGACGAGACTTGACTATGGTGCAGCTGCTTATGTGACCCAAGAAAATGTGCTGTTGGGAACCCTAACAGTACGAGAAACCATAACTTACTCGGCTCATCTGAGGCTCCCAACGAGTCTGACCAAACTAGAGGTCAATGACATTGTTGATGCCACAATTACCGATATGGGTCTGCAAGACTGTGCTCACAGGCTTATCGGAAACTGGCATTTGAGGGGCATAAGTGGAGGAGAGAAGAAGAGGCTAAGCATTGCACTCGAAATACTCACAAAGCCAAGGTTGTTGTTTCTCGATGAGCCTACCAGTGGCCTCGACAGTGCTGCAGCTTTCTTCGTAGTTCAAACCCTCAGATATATTGCTAAAGATGGCAGAACTGTCATTTCTTCGATTCATCAGCCCAGTAGTGAAGTGTTTGCTTTGTTTGATGATCTTGTTCTGCTTTCTAGTGGCCAAACAGTTTATTCTGGTCAAGCAAAAATGGCAGTAGAGTTCTTTGCTAAAGCTGGAGTTCCATGCCCAAGTCGAAGAAACCCTTCCGATCACTTTCTTCGTTGTATTAATTCAGACTTCGACGAAGTCACAATGAACACCTCTCACAAAATACGTGAAATCCCGAAATCATCAGAACCTTTAATGAACTTTGCAACAGCAGAGATAAAAGCAATGCTTGTTGATCAGTACAGACGCTCGGAGTATGGCCACGATGATAATGAAAAACTTGTTTTACAGGAAGGACTTGGGGTAGAAAAGAGGAGTGGAAGCCAAAGCAAAGTGGTGGAAGCAACTCTCAATATTGACACAGAGGTTTTTCATAGAGAAAGGCTCAATGGGCATTATGGAGTTGCTGTCTTTACCCTGTCAAATTTCCTCTCTTCCTTCCCATTCTTGGCTTTGATGTCAATTGCATCTGCAACTATAACTTACTACATGGTGGAAAAGCATTCTCATTCCTCCGACTATGTGTTCATGTGCCTTGATCTTCTCAGCGCCATTGCAGCGGGAATCATGATGATGACTGCCGGATTCTTCCGCTTCATGCCTGACCTTCCCAAACCCGTTTGGCGCTATCCAGTTTCATATCTGAACTATGGTGCATGGGCGCTGCAGGGAGAATACAAGAACGGATTGATTGGCCGTGAGTTTGATTCTCTTACACCCAATGGCCCGAAGCTGAAAGGCGAGGACATACTCAAAACTCTGCTGGGTATTCAACCAGATCAATCAAAGTGGTGGGATTTGGCTGCTGTCTGTGCCATTGTTGTATCTTTCAGATTTATTTTCTTCATCATCCTTAAGATCAAAGAGAGAGCTTCACCTCTTTTCCGAGCATGTTATGCTAAGCAAACTCTGAAGCATCTCAAGAAGCGACCCTCATTCAGGAAAGATGGAACTCTTTTCCCCTTCCATGAGACATCAACCTCTCCATCCCTTGTCTTTTCAAGAGGGTCTCAACTCTCCACTGCACTAGAAGTGGAAACTGAAATCCACGTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008150 GO:0009506 GO:0009628 GO:0009651 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944 GO:0080051 GO:0080167 GO:0080172

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

593

Amino Acids

66.3

Weight (kDa)

9.4

Isoelectric Point (pI)

48.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	98 - 197	2e-12	ABC transporter
ABC2_membrane_7	PF19055	226 - 300	8.3e-12	ABC-2 type transporter
ABC2_membrane	PF01061	360 - 423	5.6e-06	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51460
fragaria_vesca	FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480
malus_domestica	MD00G1192100.v1.1 MD03G1172300.v1.1
prunus_persica	Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1
pyrus_communis	pycom03g12950
rosa_chinensis	RchiOBHm_Chr5g0052851 RchiOBHm_Chr5g0052971
rosa_laevigata	RLG00000034787
rosa_multiflora	Rmu_sc0006729.1_g000004 Rmu_ssc0000311.1_g000005 Rmu_ssc0000311.1_g000013
rosa_roxburghii	Rroxscaffold_1G00027600 Rroxscaffold_1G00028670 Rroxscaffold_1G00028720 Rroxscaffold_1G00028730
rosa_rugosa	Rorug05G0269000
rosa_samantha	Rh5BG352000 Rh5CG378600 Rh5DG368300
rosa_wichuraiana	Rw5G032170 Rw5G032180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	62
AccB1I	GGYRCC	1 cut(s)	117
AccI	GTMKAC	1 cut(s)	235
AccII	CGCG	1 cut(s)	202
AciI	CCGC	9 cut(s)	70, 115, 121, 143, 183, 202, 230, 1283, 1315
AcoI	YGGCCR	5 cut(s)	80, 209, 733, 982, 1417
AcsI	RAATTY	1 cut(s)	1147
AcuI	CTGAAG	1 cut(s)	1655
AcyI	GRCGYC	2 cut(s)	59, 118
AfaI	GTAC	2 cut(s)	357, 965
AfiI	CCNNNNNNNGG	3 cut(s)	590, 1171, 1662
AflII	CTTAAG	1 cut(s)	1577
AgsI	TTSAA	4 cut(s)	134, 626, 1496, 1725
AluBI	AGCT	6 cut(s)	29, 311, 611, 788, 1456, 1595
AluI	AGCT	6 cut(s)	29, 311, 611, 788, 1456, 1595
Alw21I	GWGCWC	2 cut(s)	31, 472
Alw26I	GTCTC	3 cut(s)	286, 1688, 1737
Ama87I	CYCGRG	1 cut(s)	44
AoxI	GGCC	7 cut(s)	80, 209, 592, 733, 982, 1417, 1447
ApeKI	GCWGC	7 cut(s)	308, 311, 605, 608, 1280, 1387, 1526
ApoI	RAATTY	1 cut(s)	1147
ArsI	GACNNNNNNTTYG	2 cut(s)	402, 434
AseI	ATTAAT	1 cut(s)	843
Asp700I	GAANNNNTTC	1 cut(s)	817
AspLEI	GCGC	4 cut(s)	120, 1274, 1350, 1387
AspS9I	GGNCC	1 cut(s)	1448
AsuC2I	CCSGG	1 cut(s)	84
AsuHPI	GGTGA	2 cut(s)	200, 1590
AvaI	CYCGRG	1 cut(s)	44
BalI	TGGCCA	2 cut(s)	735, 984
BanI	GGYRCC	1 cut(s)	117
BanII	GRGCYC	2 cut(s)	20, 31
Bbv12I	GWGCWC	2 cut(s)	31, 472
BbvI	GCAGC	7 cut(s)	298, 320, 592, 620, 1292, 1374, 1513
BccI	CCATC	3 cut(s)	644, 1664, 1717
BceAI	ACGGC	2 cut(s)	108, 1404
BcgI	CGANNNNNNTGC	4 cut(s)	523, 557, 587, 621
BclI	TGATCA	1 cut(s)	958
BcnI	CCSGG	1 cut(s)	84
BcoDI	GTCTC	3 cut(s)	286, 1688, 1737
BfaI	CTAG	3 cut(s)	413, 729, 1751
BfmI	CTRYAG	2 cut(s)	606, 1388
BfoI	RGCGCY	4 cut(s)	121, 1275, 1351, 1388
BfrI	CTTAAG	1 cut(s)	1577
BlpI	GCTNAGC	2 cut(s)	530, 1623
Bme1390I	CCNGG	1 cut(s)	84
BmeT110I	CYCGRG	1 cut(s)	44
BmgT120I	GGNCC	1 cut(s)	1448
BmiI	GGNNCC	3 cut(s)	119, 346, 392
BmrFI	CCNGG	1 cut(s)	84
BmrI	ACTGGG	1 cut(s)	678
BmsI	GCATC	3 cut(s)	424, 1199, 1648
BmuI	ACTGGG	1 cut(s)	678
BplI	GAGNNNNNCTC	2 cut(s)	1092, 1124
BpmI	CTGGAG	1 cut(s)	810
Bpu1102I	GCTNAGC	2 cut(s)	530, 1623
BpuEI	CTTGAG	1 cut(s)	1628
BpuMI	CCSGG	1 cut(s)	84
BsaAI	YACGTR	1 cut(s)	890
BsaHI	GRCGYC	2 cut(s)	59, 118
BsaI	GGTCTC	1 cut(s)	1737
BsaJI	CCNNGG	4 cut(s)	45, 124, 153, 560
BsaXI	ACNNNNNCTCC	2 cut(s)	1116, 1146
Bsc4I	CCNNNNNNNGG	3 cut(s)	590, 1171, 1662
Bse118I	RCCGGY	2 cut(s)	10, 185
Bse1I	ACTGG	5 cut(s)	265, 494, 588, 684, 1355
Bse3DI	GCAATG	3 cut(s)	534, 954, 1275
BseDI	CCNNGG	4 cut(s)	45, 124, 153, 560
BseGI	GGATG	3 cut(s)	107, 1572, 1709
BseLI	CCNNNNNNNGG	3 cut(s)	590, 1171, 1662
BseMI	GCAATG	3 cut(s)	534, 954, 1275
BseMII	CTCAG	3 cut(s)	377, 646, 1282
BseNI	ACTGG	5 cut(s)	265, 494, 588, 684, 1355
BseRI	GAGGAG	2 cut(s)	528, 1051
BseX3I	CGGCCG	1 cut(s)	80
BseXI	GCAGC	7 cut(s)	298, 320, 592, 620, 1292, 1374, 1513
BseYI	CCCAGC	1 cut(s)	1486
BsgI	GTGCAG	2 cut(s)	327, 1731
Bsh1236I	CGCG	1 cut(s)	202
Bsh1285I	CGRYCG	4 cut(s)	11, 83, 103, 164
BshFI	GGCC	7 cut(s)	82, 211, 594, 735, 984, 1419, 1449
BshNI	GGYRCC	1 cut(s)	117
BsiEI	CGRYCG	4 cut(s)	11, 83, 103, 164
BsiHKAI	GWGCWC	2 cut(s)	31, 472
BsiHKCI	CYCGRG	1 cut(s)	44
BsiSI	CCGG	6 cut(s)	11, 79, 83, 186, 217, 1305
BslFI	GGGAC	1 cut(s)	171
BslI	CCNNNNNNNGG	3 cut(s)	590, 1171, 1662
BsmAI	GTCTC	3 cut(s)	286, 1688, 1737
BsmFI	GGGAC	1 cut(s)	171
BsmI	GAATGC	1 cut(s)	1225
BsnI	GGCC	7 cut(s)	82, 211, 594, 735, 984, 1419, 1449
Bso31I	GGTCTC	1 cut(s)	1737
BsoBI	CYCGRG	1 cut(s)	44
Bsp1286I	GDGCHC	3 cut(s)	20, 31, 472
Bsp143I	GATC	7 cut(s)	161, 712, 823, 958, 1261, 1501, 1581
Bsp1720I	GCTNAGC	2 cut(s)	530, 1623
BspACI	CCGC	9 cut(s)	70, 115, 121, 143, 183, 202, 230, 1283, 1315
BspANI	GGCC	7 cut(s)	82, 211, 594, 735, 984, 1419, 1449
BspCNI	CTCAG	3 cut(s)	378, 645, 1281
BspFNI	CGCG	1 cut(s)	202
BspHI	TCATGA	2 cut(s)	255, 1290
BspLI	GGNNCC	3 cut(s)	119, 346, 392
BspMAI	CTGCAG	2 cut(s)	610, 1392
BspT107I	GGYRCC	1 cut(s)	117
BspTI	CTTAAG	1 cut(s)	1577
BspTNI	GGTCTC	1 cut(s)	1737
BsrDI	GCAATG	3 cut(s)	534, 954, 1275
BsrFI	RCCGGY	2 cut(s)	10, 185
BsrI	ACTGG	5 cut(s)	265, 494, 588, 684, 1355
BssAI	RCCGGY	2 cut(s)	10, 185
BssECI	CCNNGG	4 cut(s)	45, 124, 153, 560
BssMI	GATC	7 cut(s)	161, 712, 823, 958, 1261, 1501, 1581
BssNI	GRCGYC	2 cut(s)	59, 118
BssT1I	CCWWGG	1 cut(s)	560
Bst4CI	ACNGT	7 cut(s)	104, 240, 355, 467, 602, 661, 742
Bst6I	CTCTTC	3 cut(s)	166, 518, 1162
BstACI	GRCGYC	2 cut(s)	59, 118
BstAFI	CTTAAG	1 cut(s)	1577
BstAPI	GCANNNNNTGC	1 cut(s)	1619
BstBAI	YACGTR	1 cut(s)	890
BstC8I	GCNNGC	1 cut(s)	16
BstDEI	CTNAG	5 cut(s)	386, 530, 632, 1268, 1623
BstDSI	CCRYGG	2 cut(s)	124, 153
BstENI	CCTNNNNNAGG	1 cut(s)	1660
BstF5I	GGATG	3 cut(s)	107, 1572, 1709
BstFNI	CGCG	1 cut(s)	202
BstH2I	RGCGCY	4 cut(s)	121, 1275, 1351, 1388
BstHHI	GCGC	4 cut(s)	120, 1274, 1350, 1387
BstKTI	GATC	7 cut(s)	164, 715, 826, 961, 1264, 1504, 1584
BstMAI	GTCTC	3 cut(s)	286, 1688, 1737
BstMBI	GATC	7 cut(s)	161, 712, 823, 958, 1261, 1501, 1581
BstMCI	CGRYCG	4 cut(s)	11, 83, 103, 164
BstMWI	GCNNNNNNNGC	6 cut(s)	208, 764, 1114, 1280, 1535, 1619
BstNSI	RCATGY	1 cut(s)	1617
BstSCI	CCNGG	1 cut(s)	82
BstSFI	CTRYAG	2 cut(s)	606, 1388
BstUI	CGCG	1 cut(s)	202
BstV1I	GCAGC	7 cut(s)	298, 320, 592, 620, 1292, 1374, 1513
BstZI	CGGCCG	1 cut(s)	80
BsuRI	GGCC	7 cut(s)	82, 211, 594, 735, 984, 1419, 1449
BtgI	CCRYGG	2 cut(s)	124, 153
BtsCI	GGATG	3 cut(s)	107, 1572, 1709
BtsI	GCAGTG	1 cut(s)	1743
BtsIMutI	CAGTG	3 cut(s)	595, 607, 1743
Cac8I	GCNNGC	1 cut(s)	16
CciI	TCATGA	2 cut(s)	255, 1290
CfoI	GCGC	4 cut(s)	120, 1274, 1350, 1387
Cfr10I	RCCGGY	2 cut(s)	10, 185
Cfr13I	GGNCC	1 cut(s)	1448
CseI	GACGC	1 cut(s)	978
Csp6I	GTAC	2 cut(s)	356, 964
CspCI	CAANNNNNGTGG	2 cut(s)	1493, 1528
CviAII	CATG	9 cut(s)	256, 798, 1213, 1252, 1291, 1321, 1380, 1614, 1691
CviQI	GTAC	2 cut(s)	356, 964
DdeI	CTNAG	5 cut(s)	386, 530, 632, 1268, 1623
DinI	GGCGCC	1 cut(s)	119
DpnI	GATC	7 cut(s)	163, 714, 825, 960, 1263, 1503, 1583
DpnII	GATC	7 cut(s)	161, 712, 823, 958, 1261, 1501, 1581
EaeI	YGGCCR	5 cut(s)	80, 209, 733, 982, 1417
EagI	CGGCCG	1 cut(s)	80
Eam1104I	CTCTTC	3 cut(s)	166, 518, 1162
EarI	CTCTTC	3 cut(s)	166, 518, 1162
Ecl136II	GAGCTC	1 cut(s)	29
EclXI	CGGCCG	1 cut(s)	80
Eco130I	CCWWGG	1 cut(s)	560
Eco24I	GRGCYC	2 cut(s)	20, 31
Eco31I	GGTCTC	1 cut(s)	1737
Eco52I	CGGCCG	1 cut(s)	80
Eco53kI	GAGCTC	1 cut(s)	29
Eco57I	CTGAAG	1 cut(s)	1655
Eco88I	CYCGRG	1 cut(s)	44
EcoICRI	GAGCTC	1 cut(s)	29
EcoNI	CCTNNNNNAGG	1 cut(s)	1660
EcoT14I	CCWWGG	1 cut(s)	560
EcoT38I	GRGCYC	2 cut(s)	20, 31
EgeI	GGCGCC	1 cut(s)	119
EheI	GGCGCC	1 cut(s)	119
ErhI	CCWWGG	1 cut(s)	560
FaeI	CATG	9 cut(s)	259, 801, 1216, 1255, 1294, 1324, 1383, 1617, 1694
FalI	AAGNNNNNCTT	4 cut(s)	802, 834, 936, 968
FaqI	GGGAC	1 cut(s)	171
FatI	CATG	9 cut(s)	255, 797, 1212, 1251, 1290, 1320, 1379, 1613, 1690
FauI	CCCGC	3 cut(s)	190, 223, 1276
FbaI	TGATCA	1 cut(s)	958
FblI	GTMKAC	1 cut(s)	235
FokI	GGATG	3 cut(s)	94, 1559, 1696
FriOI	GRGCYC	2 cut(s)	20, 31
FspBI	CTAG	3 cut(s)	413, 729, 1751
GlaI	GCGC	4 cut(s)	119, 1273, 1349, 1386
GsaI	CCCAGC	1 cut(s)	1490
GsuI	CTGGAG	1 cut(s)	810
HaeII	RGCGCY	4 cut(s)	121, 1275, 1351, 1388
HaeIII	GGCC	7 cut(s)	82, 211, 594, 735, 984, 1419, 1449
HapII	CCGG	6 cut(s)	11, 79, 83, 186, 217, 1305
HgaI	GACGC	1 cut(s)	978
HhaI	GCGC	4 cut(s)	120, 1274, 1350, 1387
Hin1I	GRCGYC	2 cut(s)	59, 118
Hin1II	CATG	9 cut(s)	259, 801, 1216, 1255, 1294, 1324, 1383, 1617, 1694
Hin6I	GCGC	4 cut(s)	118, 1272, 1348, 1385
HinP1I	GCGC	4 cut(s)	118, 1272, 1348, 1385
HinfI	GANTC	6 cut(s)	134, 400, 673, 1287, 1308, 1430
HpaII	CCGG	6 cut(s)	11, 79, 83, 186, 217, 1305
HphI	GGTGA	2 cut(s)	200, 1590
Hpy166II	GTNNAC	1 cut(s)	236
Hpy188III	TCNNGA	8 cut(s)	243, 256, 575, 898, 1291, 1645, 1663, 1725
Hpy8I	GTNNAC	1 cut(s)	236
Hpy99I	CGWCG	6 cut(s)	61, 64, 67, 142, 202, 860
HpyAV	CCTTC	6 cut(s)	161, 828, 1010, 1171, 1340, 1696
HpyCH4III	ACNGT	7 cut(s)	104, 240, 355, 467, 602, 661, 742
HpyCH4IV	ACGT	3 cut(s)	59, 889, 1773
HpyF10VI	GCNNNNNNNGC	6 cut(s)	208, 764, 1114, 1280, 1535, 1619
HpyF3I	CTNAG	5 cut(s)	386, 530, 632, 1268, 1623
HpySE526I	ACGT	3 cut(s)	59, 889, 1773
Hsp92I	GRCGYC	2 cut(s)	59, 118
Hsp92II	CATG	9 cut(s)	259, 801, 1216, 1255, 1294, 1324, 1383, 1617, 1694
HspAI	GCGC	4 cut(s)	118, 1272, 1348, 1385
KasI	GGCGCC	1 cut(s)	117
Ksp22I	TGATCA	1 cut(s)	958
Kzo9I	GATC	7 cut(s)	161, 712, 823, 958, 1261, 1501, 1581
LmnI	GCTCC	2 cut(s)	4, 396
Lsp1109I	GCAGC	7 cut(s)	298, 320, 592, 620, 1292, 1374, 1513
LweI	GCATC	3 cut(s)	424, 1199, 1648
MaeI	CTAG	3 cut(s)	413, 729, 1751
MaeII	ACGT	3 cut(s)	59, 889, 1773
MaeIII	GTNAC	4 cut(s)	222, 240, 319, 862
MalI	GATC	7 cut(s)	163, 714, 825, 960, 1263, 1503, 1583
MboI	GATC	7 cut(s)	161, 712, 823, 958, 1261, 1501, 1581
MfeI	CAATTG	1 cut(s)	1185
MhlI	GDGCHC	3 cut(s)	20, 31, 472
MlsI	TGGCCA	2 cut(s)	735, 984
MluCI	AATT	5 cut(s)	73, 441, 844, 1147, 1185
MluNI	TGGCCA	2 cut(s)	735, 984
Mly113I	GGCGCC	1 cut(s)	118
MlyI	GAGTC	1 cut(s)	409
MmeI	TCCRAC	1 cut(s)	1263
Mox20I	TGGCCA	2 cut(s)	735, 984
MroXI	GAANNNNTTC	1 cut(s)	817
MscI	TGGCCA	2 cut(s)	735, 984
MseI	TTAA	4 cut(s)	276, 843, 917, 1578
MslI	CAYNNNNRTG	1 cut(s)	1295
Msp20I	TGGCCA	2 cut(s)	735, 984
MspA1I	CMGCKG	2 cut(s)	311, 1283
MspCI	CTTAAG	1 cut(s)	1577
MspI	CCGG	6 cut(s)	11, 79, 83, 186, 217, 1305
MspR9I	CCNGG	1 cut(s)	84
MunI	CAATTG	1 cut(s)	1185
Mva1269I	GAATGC	1 cut(s)	1225
MvnI	CGCG	1 cut(s)	202
MwoI	GCNNNNNNNGC	6 cut(s)	208, 764, 1114, 1280, 1535, 1619
NarI	GGCGCC	1 cut(s)	118
NciI	CCSGG	1 cut(s)	84
NdeII	GATC	7 cut(s)	161, 712, 823, 958, 1261, 1501, 1581
NlaIII	CATG	9 cut(s)	259, 801, 1216, 1255, 1294, 1324, 1383, 1617, 1694
NlaIV	GGNNCC	3 cut(s)	119, 346, 392
NmeAIII	GCCGAG	2 cut(s)	237, 356
NmuCI	GTSAC	3 cut(s)	240, 319, 862
NspI	RCATGY	1 cut(s)	1617
PagI	TCATGA	2 cut(s)	255, 1290
PcsI	WCGNNNNNNNCGW	1 cut(s)	143
PctI	GAATGC	1 cut(s)	1225
PdmI	GAANNNNTTC	1 cut(s)	817
PfeI	GAWTC	5 cut(s)	134, 673, 1287, 1308, 1430
PflFI	GACNNNGTC	2 cut(s)	61, 860
Ple19I	CGATCG	1 cut(s)	164
PleI	GAGTC	1 cut(s)	408
PluTI	GGCGCC	1 cut(s)	121
PpsI	GAGTC	1 cut(s)	408
Ppu21I	YACGTR	1 cut(s)	890
PshBI	ATTAAT	1 cut(s)	843
Psp124BI	GAGCTC	1 cut(s)	31
PspFI	CCCAGC	1 cut(s)	1486
PspN4I	GGNNCC	3 cut(s)	119, 346, 392
PspPI	GGNCC	1 cut(s)	1448
PstI	CTGCAG	2 cut(s)	610, 1392
PsyI	GACNNNGTC	2 cut(s)	61, 860
PvuI	CGATCG	1 cut(s)	164
PvuII	CAGCTG	1 cut(s)	311
RsaI	GTAC	2 cut(s)	357, 965
RsaNI	GTAC	2 cut(s)	356, 964
RseI	CAYNNNNRTG	1 cut(s)	1295
SacI	GAGCTC	1 cut(s)	31
SaqAI	TTAA	4 cut(s)	276, 843, 917, 1578
Sau3AI	GATC	7 cut(s)	161, 712, 823, 958, 1261, 1501, 1581
Sau96I	GGNCC	1 cut(s)	1448
SchI	GAGTC	1 cut(s)	409
ScrFI	CCNGG	1 cut(s)	84
SduI	GDGCHC	3 cut(s)	20, 31, 472
SfaNI	GCATC	3 cut(s)	424, 1199, 1648
SfcI	CTRYAG	2 cut(s)	606, 1388
SfoI	GGCGCC	1 cut(s)	119
SgrAI	CRCCGGYG	1 cut(s)	185
SmiMI	CAYNNNNRTG	1 cut(s)	1295
SmlI	CTYRAG	2 cut(s)	1577, 1643
SmoI	CTYRAG	2 cut(s)	1577, 1643
Sse9I	AATT	5 cut(s)	73, 441, 844, 1147, 1185
SsiI	CCGC	9 cut(s)	70, 115, 121, 143, 183, 202, 230, 1283, 1315
SspDI	GGCGCC	1 cut(s)	117
SspI	AATATT	1 cut(s)	1078
SspMI	CTAG	3 cut(s)	413, 729, 1751
SstI	GAGCTC	1 cut(s)	31
StyD4I	CCNGG	1 cut(s)	82
StyI	CCWWGG	1 cut(s)	560
TaaI	ACNGT	7 cut(s)	104, 240, 355, 467, 602, 661, 742
TaiI	ACGT	3 cut(s)	62, 892, 1776
TaqI	TCGA	8 cut(s)	25, 65, 543, 576, 597, 671, 808, 855
TasI	AATT	5 cut(s)	73, 441, 844, 1147, 1185
TatI	WGTACW	1 cut(s)	963
TauI	GCSGC	4 cut(s)	72, 118, 123, 146
TfiI	GAWTC	5 cut(s)	134, 673, 1287, 1308, 1430
Tru1I	TTAA	4 cut(s)	276, 843, 917, 1578
Tru9I	TTAA	4 cut(s)	276, 843, 917, 1578
TscAI	CASTG	3 cut(s)	595, 607, 1750
TseFI	GTSAC	3 cut(s)	240, 319, 862
TseI	GCWGC	7 cut(s)	308, 311, 605, 608, 1280, 1387, 1526
Tsp45I	GTSAC	3 cut(s)	240, 319, 862
TspGWI	ACGGA	1 cut(s)	1422
TspRI	CASTG	3 cut(s)	595, 607, 1750
Tth111I	GACNNNGTC	2 cut(s)	61, 860
Vha464I	CTTAAG	1 cut(s)	1577
VspI	ATTAAT	1 cut(s)	843
XagI	CCTNNNNNAGG	1 cut(s)	1660
XapI	RAATTY	1 cut(s)	1147
XceI	RCATGY	1 cut(s)	1617
XmiI	GTMKAC	1 cut(s)	235
XmnI	GAANNNNTTC	1 cut(s)	817
XspI	CTAG	3 cut(s)	413, 729, 1751
ZraI	GACGTC	1 cut(s)	60

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.