Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003317

Physical Location & Seq

Genomic Coordinates Forward (+)

34972318 .. 34977391

Gene Structure 5074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00027600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGTGGCGTCGGATCCCACCACGGAGAGGGCCATCGGGGCGATGCTCCCCGGTCGCCTTTATTGCCGATCCGAGAGAGACGAACGGGATCCGTCTCAAGCTATGGAGTTAGAGGAATATAGTGGAGCTGGTTCTGTAAAATCTTCAGATATAAGTGGTGATAGTGGTGACCGAAGAAGAGATGGTGAAGGTGGCAATAATGGCTTGATGTATTTGGTGTGGGAAGATGTGAGTGTTGTGCTTCCAAACTTTGGGATTGGAAATAGCACTAATGGAGGACACACCAGAAGATTGCTTGATGGCCTCACTGGTTTTGCTGAGCCTGGTAGGATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCAACCCTTCTTGATGCTTTAGCAGGCCAACTGTCACGAAATGTTATCATGACTGGAAATGTTCTTCTTAATGGGAACAAGACGAGACTTGACTATGGTGCAGCTGCTTATGTGACCCAAGAAAATGTGCTGTTGGGAACCCTAACAGTACGAGAAACCATAACTTACTCGGCTCATCTGAGGCTCCCAACGAGTCTGACCAAACTAGAGGTCAATGACATTGTTGATGCCACAATTACCGATATGGGTCTGCAAGACTGTGCTCACAGGCTTATCGGAAACTGGCATTTGAGGGGCATAAGTGGAGGAGAGAAGAAGAGGCTAAGCATTGCACTCGAAATACTCACAAAGCCAAGGTTGTTGTTTCTCGATGAGCCTACCAGTGGCCTCGACAGTGCTGCAGCTTTCTTCGTAGTTCAAACCCTCAGATATATTGCTAAAGATGGCAGAACTGTCATTTCTTCGATTCATCAGCCCAGTAGTGAAGTGTTTGCTTTGTTTGATGATCTTGTTCTGCTTTCTAGTGGCCAAACAGTTTATTCTGGTCAAGCAAAAATGGCAGTAGAGTTCTTTGCTAAAGCTGGAGTTCCATGCCCAAGTCGAAGAAACCCTTCCGATCACTTTCTTCGTTGTATTAATTCAGACTTCGACGAAGTCACAATGAACACCTCTCACAAAATACGTGAAATCCCGAAATCATCAGAACCTTTAATGAACTTTGCAACAGCAGAGATAAAAGCAATGCTTGTTGATCAGTACAGACGCTCGGAGTATGGCCACGATGATAATGAAAAACTTGTTTTACAGGAAGGACTTGGGGTAGAAAAGAGGAGTGGAAGCCAGGCAAAGTGGTGGAAGCAACTCTCAATATTGACACAGAGGTCTTTCCTCAACATGTCTAGGGATATGGGCTATTACTGGGTGAGAATCATCGTCTACATACTTTTATCTCTTTGCGTTGGCACAATTTTCTATGACCTGGGAACAAATTACACGTCAATATTTGCAAGAGGAGCTTGTGCTGGATTTATTTCTGGCTTCATGACTTTCATGTCCATTGGAGGCTTCCCATCCTTCCTTGAAGAAATGAAGGTTTTTCATAGAGAAAGGCTCAATGGGCATTATGGAGTTGCTGTCTTTACCCTGTCAAATTTCCTCTCTTCCTTCCCATTCTTGGCTTTGATGTCAATTGCATCTGCAACTATAACTTACTACATGGTGGAAAAGCATTCTCATTCCTCCGACTATGTGTTCATGTGCCTTGATCTTCTCAGCGCCATTGCAGCGGTAGAAAGCTCCATGATGATCATAGCTTCTCTTGTTCCGAACTACTTAACGGGAGTAATAATTGGAGCAGGATACTTGGGAATCATGATGATGACTGCCGGATTCTTCCGCTTCATGCCTGACCTTCCCAAACCCGTTTGGCGCTATCCAGTTTCATATCTGAACTATGGTGCATGGGCGCTGCAGGGAGAATACAAGAACGGATTGATTGGCCGTGAGTTTGATTCTCTTACACCCAATGGCCCGAAGCTGAAAGGCGAGGACATACTCAAAACTCTGCTGGATTTATTTTCTTCATCATCCTTAAGATCAAAGAGAGCTTCACCTCTTTTCCGAGCATGTTATGCTAAGCAAACTCTGAAGCATCTCAAGAAGCGACCCTCATTCAGGAAAGATGGAACTCTTTTCCCTTCCATGAGACATCAACCTCTCCATCCCTTGTCTTTTCAAGAGGGTCTCAACTCTCCACTGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008150 GO:0009506 GO:0009628 GO:0009651 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944 GO:0080051 GO:0080167 GO:0080172

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

709

Amino Acids

78.49

Weight (kDa)

8.42

Isoelectric Point (pI)

41.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	105 - 250	7.5e-25	ABC transporter
AAA_29	PF13555	109 - 130	7e-06	P-loop containing region of AAA domain
ABC2_membrane_7	PF19055	279 - 353	9.9e-12	ABC-2 type transporter
ABC2_membrane	PF01061	409 - 614	3.9e-36	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51460
fragaria_vesca	FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480 FvH4_3g28480
malus_domestica	MD00G1192100.v1.1 MD03G1172300.v1.1
prunus_persica	Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1 Prupe.4G254300_v2.0.a1
pyrus_communis	pycom03g12950
rosa_chinensis	RchiOBHm_Chr5g0052851 RchiOBHm_Chr5g0052971
rosa_laevigata	RLG00000034787
rosa_multiflora	Rmu_sc0006729.1_g000004 Rmu_ssc0000311.1_g000005 Rmu_ssc0000311.1_g000013
rosa_roxburghii	Rroxscaffold_1G00027600 Rroxscaffold_1G00028670 Rroxscaffold_1G00028720 Rroxscaffold_1G00028730
rosa_rugosa	Rorug05G0269000
rosa_samantha	Rh5BG352000 Rh5CG378600 Rh5DG368300
rosa_wichuraiana	Rw5G032170 Rw5G032180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1246, 1417
AccB7I	CCANNNNNTGG	1 cut(s)	251
AccI	GTMKAC	1 cut(s)	1302
AciI	CCGC	2 cut(s)	1652, 1762
AclWI	GGATC	6 cut(s)	8, 21, 63, 83, 96, 338
AcoI	YGGCCR	3 cut(s)	892, 1141, 1864
AcsI	RAATTY	1 cut(s)	1516
AcuI	CTGAAG	2 cut(s)	129, 2033
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	2 cut(s)	516, 1124
AfiI	CCNNNNNNNGG	5 cut(s)	27, 251, 749, 1540, 2040
AflII	CTTAAG	1 cut(s)	1957
AflIII	ACRYGT	2 cut(s)	1260, 1359
AgsI	TTSAA	3 cut(s)	785, 1448, 2102
AjiI	CACGTC	1 cut(s)	1362
AjnI	CCWGG	3 cut(s)	322, 1206, 1344
Alw21I	GWGCWC	1 cut(s)	631
Alw26I	GTCTC	5 cut(s)	72, 99, 445, 2065, 2114
AlwI	GGATC	6 cut(s)	8, 21, 63, 83, 96, 338
AoxI	GGCC	8 cut(s)	30, 301, 391, 751, 892, 1141, 1864, 1894
ApeKI	GCWGC	6 cut(s)	467, 470, 764, 767, 1649, 1834
ApoI	RAATTY	1 cut(s)	1516
ArsI	GACNNNNNNTTYG	4 cut(s)	561, 593, 1346, 1378
AseI	ATTAAT	1 cut(s)	1002
Asp700I	GAANNNNTTC	1 cut(s)	976
AspLEI	GCGC	3 cut(s)	1643, 1797, 1834
AspS9I	GGNCC	3 cut(s)	30, 347, 1895
AsuC2I	CCSGG	1 cut(s)	51
AsuHPI	GGTGA	5 cut(s)	170, 179, 197, 1300, 1968
AvaII	GGWCC	1 cut(s)	347
BalI	TGGCCA	2 cut(s)	894, 1143
BamHI	GGATCC	2 cut(s)	13, 88
Bbv12I	GWGCWC	1 cut(s)	631
BbvI	GCAGC	6 cut(s)	457, 479, 751, 779, 1661, 1821
BccI	CCATC	7 cut(s)	41, 176, 293, 803, 1444, 2042, 2094
BceAI	ACGGC	1 cut(s)	1851
BcgI	CGANNNNNNTGC	4 cut(s)	682, 716, 746, 780
BciT130I	CCWGG	3 cut(s)	324, 1208, 1346
BciVI	GTATCC	1 cut(s)	1718
BclI	TGATCA	2 cut(s)	1117, 1671
BcnI	CCSGG	1 cut(s)	51
BcoDI	GTCTC	5 cut(s)	72, 99, 445, 2065, 2114
BfaI	CTAG	4 cut(s)	572, 888, 1266, 2128
BfmI	CTRYAG	2 cut(s)	765, 1835
BfoI	RGCGCY	3 cut(s)	1644, 1798, 1835
BfrI	CTTAAG	1 cut(s)	1957
BfuI	GTATCC	1 cut(s)	1718
BglI	GCCNNNNNGGC	1 cut(s)	38
BisI	GCNGC	6 cut(s)	468, 471, 765, 768, 1650, 1835
BlpI	GCTNAGC	3 cut(s)	318, 689, 2001
BlsI	GCNGC	6 cut(s)	469, 472, 766, 769, 1651, 1836
Bme1390I	CCNGG	4 cut(s)	51, 324, 1208, 1346
Bme18I	GGWCC	1 cut(s)	347
BmgBI	CACGTC	1 cut(s)	1362
BmgT120I	GGNCC	3 cut(s)	30, 347, 1895
BmiI	GGNNCC	5 cut(s)	15, 90, 348, 505, 551
BmrFI	CCNGG	4 cut(s)	51, 324, 1208, 1346
BmrI	ACTGGG	2 cut(s)	837, 1294
BmsI	GCATC	5 cut(s)	33, 370, 583, 1568, 2026
BmuI	ACTGGG	2 cut(s)	837, 1294
BplI	GAGNNNNNCTC	2 cut(s)	1461, 1493
BpmI	CTGGAG	1 cut(s)	969
Bpu1102I	GCTNAGC	3 cut(s)	318, 689, 2001
BpuEI	CTTGAG	2 cut(s)	81, 2006
BpuMI	CCSGG	1 cut(s)	51
BsaAI	YACGTR	1 cut(s)	1049
BsaHI	GRCGYC	1 cut(s)	8
BsaI	GGTCTC	1 cut(s)	2114
BsaJI	CCNNGG	4 cut(s)	21, 49, 719, 1345
BsaXI	ACNNNNNCTCC	2 cut(s)	1485, 1515
Bsc4I	CCNNNNNNNGG	5 cut(s)	27, 251, 749, 1540, 2040
Bse1I	ACTGG	7 cut(s)	313, 424, 653, 747, 843, 1289, 1802
Bse3DI	GCAATG	3 cut(s)	693, 1113, 1644
BseBI	CCWGG	3 cut(s)	324, 1208, 1346
BseDI	CCNNGG	4 cut(s)	21, 49, 719, 1345
BseGI	GGATG	3 cut(s)	1436, 1952, 2086
BseLI	CCNNNNNNNGG	5 cut(s)	27, 251, 749, 1540, 2040
BseMI	GCAATG	3 cut(s)	693, 1113, 1644
BseMII	CTCAG	4 cut(s)	309, 536, 805, 1651
BseNI	ACTGG	7 cut(s)	313, 424, 653, 747, 843, 1289, 1802
BseRI	GAGGAG	3 cut(s)	687, 1210, 1392
BseXI	GCAGC	6 cut(s)	457, 479, 751, 779, 1661, 1821
BsgI	GTGCAG	2 cut(s)	486, 2108
Bsh1285I	CGRYCG	1 cut(s)	55
BshFI	GGCC	8 cut(s)	32, 303, 393, 753, 894, 1143, 1866, 1896
BsiEI	CGRYCG	1 cut(s)	55
BsiHKAI	GWGCWC	1 cut(s)	631
BsiSI	CCGG	2 cut(s)	51, 1752
BslI	CCNNNNNNNGG	5 cut(s)	27, 251, 749, 1540, 2040
BsmAI	GTCTC	5 cut(s)	72, 99, 445, 2065, 2114
BsmBI	CGTCTC	2 cut(s)	72, 99
BsmI	GAATGC	1 cut(s)	1594
BsnI	GGCC	8 cut(s)	32, 303, 393, 753, 894, 1143, 1866, 1896
Bso31I	GGTCTC	1 cut(s)	2114
Bsp1286I	GDGCHC	1 cut(s)	631
Bsp1720I	GCTNAGC	3 cut(s)	318, 689, 2001
BspACI	CCGC	2 cut(s)	1652, 1762
BspANI	GGCC	8 cut(s)	32, 303, 393, 753, 894, 1143, 1866, 1896
BspCNI	CTCAG	4 cut(s)	310, 537, 804, 1650
BspHI	TCATGA	3 cut(s)	414, 1407, 1737
BspLI	GGNNCC	5 cut(s)	15, 90, 348, 505, 551
BspMAI	CTGCAG	2 cut(s)	769, 1839
BspPI	GGATC	6 cut(s)	8, 21, 63, 83, 96, 338
BspTI	CTTAAG	1 cut(s)	1957
BspTNI	GGTCTC	1 cut(s)	2114
BsrDI	GCAATG	3 cut(s)	693, 1113, 1644
BsrI	ACTGG	7 cut(s)	313, 424, 653, 747, 843, 1289, 1802
BssECI	CCNNGG	4 cut(s)	21, 49, 719, 1345
BssNI	GRCGYC	1 cut(s)	8
BssT1I	CCWWGG	1 cut(s)	719
Bst2UI	CCWGG	3 cut(s)	324, 1208, 1346
Bst4CI	ACNGT	6 cut(s)	399, 514, 626, 761, 820, 901
Bst6I	CTCTTC	3 cut(s)	172, 677, 1531
BstACI	GRCGYC	1 cut(s)	8
BstAFI	CTTAAG	1 cut(s)	1957
BstAPI	GCANNNNNTGC	1 cut(s)	1997
BstBAI	YACGTR	1 cut(s)	1049
BstC8I	GCNNGC	1 cut(s)	391
BstDEI	CTNAG	6 cut(s)	318, 545, 689, 791, 1637, 2001
BstDSI	CCRYGG	1 cut(s)	21
BstEII	GGTNACC	1 cut(s)	167
BstENI	CCTNNNNNAGG	1 cut(s)	2038
BstF5I	GGATG	3 cut(s)	1436, 1952, 2086
BstH2I	RGCGCY	3 cut(s)	1644, 1798, 1835
BstHHI	GCGC	3 cut(s)	1643, 1797, 1834
BstMAI	GTCTC	5 cut(s)	72, 99, 445, 2065, 2114
BstMCI	CGRYCG	1 cut(s)	55
BstMWI	GCNNNNNNNGC	8 cut(s)	38, 63, 201, 923, 1379, 1483, 1649, 1997
BstNI	CCWGG	3 cut(s)	324, 1208, 1346
BstNSI	RCATGY	2 cut(s)	1264, 1995
BstPI	GGTNACC	1 cut(s)	167
BstSCI	CCNGG	4 cut(s)	49, 322, 1206, 1344
BstSFI	CTRYAG	2 cut(s)	765, 1835
BstV1I	GCAGC	6 cut(s)	457, 479, 751, 779, 1661, 1821
BstX2I	RGATCY	2 cut(s)	13, 88
BstYI	RGATCY	2 cut(s)	13, 88
BsuI	GTATCC	1 cut(s)	1718
BsuRI	GGCC	8 cut(s)	32, 303, 393, 753, 894, 1143, 1866, 1896
BtgI	CCRYGG	1 cut(s)	21
BtgZI	GCGATG	1 cut(s)	56
BtrI	CACGTC	1 cut(s)	1362
BtsCI	GGATG	3 cut(s)	1436, 1952, 2086
BtsI	GCAGTG	1 cut(s)	2120
BtsIMutI	CAGTG	4 cut(s)	306, 754, 766, 2120
Cac8I	GCNNGC	1 cut(s)	391
CciI	TCATGA	3 cut(s)	414, 1407, 1737
CfoI	GCGC	3 cut(s)	1643, 1797, 1834
Cfr13I	GGNCC	3 cut(s)	30, 347, 1895
CseI	GACGC	1 cut(s)	1137
Csp6I	GTAC	2 cut(s)	515, 1123
CviQI	GTAC	2 cut(s)	515, 1123
DdeI	CTNAG	6 cut(s)	318, 545, 689, 791, 1637, 2001
DrdI	GACNNNNNNGTC	2 cut(s)	1246, 1417
DseDI	GACNNNNNNGTC	2 cut(s)	1246, 1417
EaeI	YGGCCR	3 cut(s)	892, 1141, 1864
Eam1104I	CTCTTC	3 cut(s)	172, 677, 1531
EarI	CTCTTC	3 cut(s)	172, 677, 1531
Eco130I	CCWWGG	1 cut(s)	719
Eco31I	GGTCTC	1 cut(s)	2114
Eco47I	GGWCC	1 cut(s)	347
Eco57I	CTGAAG	2 cut(s)	129, 2033
Eco91I	GGTNACC	1 cut(s)	167
EcoNI	CCTNNNNNAGG	1 cut(s)	2038
EcoO109I	RGGNCCY	1 cut(s)	347
EcoO65I	GGTNACC	1 cut(s)	167
EcoRII	CCWGG	3 cut(s)	322, 1206, 1344
EcoT14I	CCWWGG	1 cut(s)	719
ErhI	CCWWGG	1 cut(s)	719
Esp3I	CGTCTC	2 cut(s)	72, 99
FalI	AAGNNNNNCTT	6 cut(s)	961, 993, 1095, 1127, 1366, 1398
FbaI	TGATCA	2 cut(s)	1117, 1671
FblI	GTMKAC	1 cut(s)	1302
Fnu4HI	GCNGC	6 cut(s)	468, 471, 765, 768, 1650, 1835
FokI	GGATG	3 cut(s)	1423, 1939, 2073
Fsp4HI	GCNGC	6 cut(s)	468, 471, 765, 768, 1650, 1835
FspBI	CTAG	4 cut(s)	572, 888, 1266, 2128
GlaI	GCGC	3 cut(s)	1642, 1796, 1833
GluI	GCNGC	6 cut(s)	468, 471, 765, 768, 1650, 1835
GsuI	CTGGAG	1 cut(s)	969
HaeII	RGCGCY	3 cut(s)	1644, 1798, 1835
HaeIII	GGCC	8 cut(s)	32, 303, 393, 753, 894, 1143, 1866, 1896
HapII	CCGG	2 cut(s)	51, 1752
HgaI	GACGC	1 cut(s)	1137
HhaI	GCGC	3 cut(s)	1643, 1797, 1834
Hin1I	GRCGYC	1 cut(s)	8
Hin6I	GCGC	3 cut(s)	1641, 1795, 1832
HinP1I	GCGC	3 cut(s)	1641, 1795, 1832
HinfI	GANTC	6 cut(s)	559, 832, 1293, 1734, 1755, 1877
HpaII	CCGG	2 cut(s)	51, 1752
HphI	GGTGA	5 cut(s)	170, 179, 197, 1300, 1968
Hpy166II	GTNNAC	1 cut(s)	1303
Hpy8I	GTNNAC	1 cut(s)	1303
Hpy99I	CGWCG	2 cut(s)	13, 1019
HpyCH4III	ACNGT	6 cut(s)	399, 514, 626, 761, 820, 901
HpyCH4IV	ACGT	2 cut(s)	1048, 1361
HpyF10VI	GCNNNNNNNGC	8 cut(s)	38, 63, 201, 923, 1379, 1483, 1649, 1997
HpyF3I	CTNAG	6 cut(s)	318, 545, 689, 791, 1637, 2001
HpySE526I	ACGT	2 cut(s)	1048, 1361
Hsp92I	GRCGYC	1 cut(s)	8
HspAI	GCGC	3 cut(s)	1641, 1795, 1832
Ksp22I	TGATCA	2 cut(s)	1117, 1671
LmnI	GCTCC	6 cut(s)	51, 125, 555, 1379, 1667, 1718
Lsp1109I	GCAGC	6 cut(s)	457, 479, 751, 779, 1661, 1821
LweI	GCATC	5 cut(s)	33, 370, 583, 1568, 2026
MaeI	CTAG	4 cut(s)	572, 888, 1266, 2128
MaeII	ACGT	2 cut(s)	1048, 1361
MaeIII	GTNAC	4 cut(s)	167, 399, 478, 1021
MfeI	CAATTG	1 cut(s)	1554
MflI	RGATCY	2 cut(s)	13, 88
MhlI	GDGCHC	1 cut(s)	631
MlsI	TGGCCA	2 cut(s)	894, 1143
MluCI	AATT	7 cut(s)	600, 1003, 1332, 1354, 1516, 1554, 1713
MluNI	TGGCCA	2 cut(s)	894, 1143
MlyI	GAGTC	1 cut(s)	568
MmeI	TCCRAC	1 cut(s)	1632
Mox20I	TGGCCA	2 cut(s)	894, 1143
MroXI	GAANNNNTTC	1 cut(s)	976
MscI	TGGCCA	2 cut(s)	894, 1143
MseI	TTAA	5 cut(s)	435, 1002, 1076, 1700, 1958
MslI	CAYNNNNRTG	1 cut(s)	1742
Msp20I	TGGCCA	2 cut(s)	894, 1143
MspA1I	CMGCKG	2 cut(s)	470, 1652
MspCI	CTTAAG	1 cut(s)	1957
MspI	CCGG	2 cut(s)	51, 1752
MspR9I	CCNGG	4 cut(s)	51, 324, 1208, 1346
MunI	CAATTG	1 cut(s)	1554
Mva1269I	GAATGC	1 cut(s)	1594
MvaI	CCWGG	3 cut(s)	324, 1208, 1346
MwoI	GCNNNNNNNGC	8 cut(s)	38, 63, 201, 923, 1379, 1483, 1649, 1997
NciI	CCSGG	1 cut(s)	51
NlaIV	GGNNCC	5 cut(s)	15, 90, 348, 505, 551
NmeAIII	GCCGAG	1 cut(s)	515
NmuCI	GTSAC	4 cut(s)	167, 399, 478, 1021
NspI	RCATGY	2 cut(s)	1264, 1995
PagI	TCATGA	3 cut(s)	414, 1407, 1737
PciI	ACATGT	1 cut(s)	1260
PctI	GAATGC	1 cut(s)	1594
PdmI	GAANNNNTTC	1 cut(s)	976
PfeI	GAWTC	5 cut(s)	832, 1293, 1734, 1755, 1877
PflFI	GACNNNGTC	1 cut(s)	1019
PflMI	CCANNNNNTGG	1 cut(s)	251
PkrI	GCNGC	6 cut(s)	469, 472, 766, 769, 1651, 1836
PleI	GAGTC	1 cut(s)	567
PpsI	GAGTC	1 cut(s)	567
Ppu21I	YACGTR	1 cut(s)	1049
PpuMI	RGGWCCY	1 cut(s)	347
PscI	ACATGT	1 cut(s)	1260
PshBI	ATTAAT	1 cut(s)	1002
Psp5II	RGGWCCY	1 cut(s)	347
Psp6I	CCWGG	3 cut(s)	322, 1206, 1344
PspEI	GGTNACC	1 cut(s)	167
PspGI	CCWGG	3 cut(s)	322, 1206, 1344
PspN4I	GGNNCC	5 cut(s)	15, 90, 348, 505, 551
PspPI	GGNCC	3 cut(s)	30, 347, 1895
PspPPI	RGGWCCY	1 cut(s)	347
PstI	CTGCAG	2 cut(s)	769, 1839
PsuI	RGATCY	2 cut(s)	13, 88
PsyI	GACNNNGTC	1 cut(s)	1019
PvuII	CAGCTG	1 cut(s)	470
RsaI	GTAC	2 cut(s)	516, 1124
RsaNI	GTAC	2 cut(s)	515, 1123
RseI	CAYNNNNRTG	1 cut(s)	1742
SaqAI	TTAA	5 cut(s)	435, 1002, 1076, 1700, 1958
SatI	GCNGC	6 cut(s)	468, 471, 765, 768, 1650, 1835
Sau96I	GGNCC	3 cut(s)	30, 347, 1895
SchI	GAGTC	1 cut(s)	568
ScrFI	CCNGG	4 cut(s)	51, 324, 1208, 1346
SduI	GDGCHC	1 cut(s)	631
SfaNI	GCATC	5 cut(s)	33, 370, 583, 1568, 2026
SfcI	CTRYAG	2 cut(s)	765, 1835
SinI	GGWCC	1 cut(s)	347
SmiMI	CAYNNNNRTG	1 cut(s)	1742
SmlI	CTYRAG	3 cut(s)	96, 1957, 2021
SmoI	CTYRAG	3 cut(s)	96, 1957, 2021
Sse9I	AATT	7 cut(s)	600, 1003, 1332, 1354, 1516, 1554, 1713
SsiI	CCGC	2 cut(s)	1652, 1762
SspI	AATATT	2 cut(s)	1236, 1368
SspMI	CTAG	4 cut(s)	572, 888, 1266, 2128
StyD4I	CCNGG	4 cut(s)	49, 322, 1206, 1344
StyI	CCWWGG	1 cut(s)	719
TaaI	ACNGT	6 cut(s)	399, 514, 626, 761, 820, 901
TaiI	ACGT	2 cut(s)	1051, 1364
TaqI	TCGA	6 cut(s)	702, 735, 756, 830, 967, 1014
TaqII	GACCGA	1 cut(s)	186
TasI	AATT	7 cut(s)	600, 1003, 1332, 1354, 1516, 1554, 1713
TatI	WGTACW	1 cut(s)	1122
TfiI	GAWTC	5 cut(s)	832, 1293, 1734, 1755, 1877
Tru1I	TTAA	5 cut(s)	435, 1002, 1076, 1700, 1958
Tru9I	TTAA	5 cut(s)	435, 1002, 1076, 1700, 1958
TscAI	CASTG	4 cut(s)	313, 754, 766, 2127
TseFI	GTSAC	4 cut(s)	167, 399, 478, 1021
TseI	GCWGC	6 cut(s)	467, 470, 764, 767, 1649, 1834
Tsp45I	GTSAC	4 cut(s)	167, 399, 478, 1021
TspGWI	ACGGA	3 cut(s)	38, 81, 1869
TspRI	CASTG	4 cut(s)	313, 754, 766, 2127
Tth111I	GACNNNGTC	1 cut(s)	1019
Van91I	CCANNNNNTGG	1 cut(s)	251
Vha464I	CTTAAG	1 cut(s)	1957
VpaK11BI	GGWCC	1 cut(s)	347
VspI	ATTAAT	1 cut(s)	1002
XagI	CCTNNNNNAGG	1 cut(s)	2038
XapI	RAATTY	1 cut(s)	1516
XceI	RCATGY	2 cut(s)	1264, 1995
XmiI	GTMKAC	1 cut(s)	1302
XmnI	GAANNNNTTC	1 cut(s)	976
XspI	CTAG	4 cut(s)	572, 888, 1266, 2128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.