pycom03g13810

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
14893197 .. 14898166
4970 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g13810.3

Sequence Viewer

Length: 1254 bp
ATGAATTACTTTCTCTCAGTCCTAACATTTTTTCCATTCCAATACCCAAACAGCCCCTTCTTTCTCTCTCTTTCACTTTCAGTCTCTCTCTCCTCAAAACCCTACTCCAATCCCAAACCCCCACACAGCGATCACAACCAAAACCTCTCTAAAACCCTAGCAATGTCCTCGATACTGCTTCGTTCCCGTTCACTCTCTCGGCTATTAAAGGCCAATGGACGCCTATTGAGCTCCGATGTGTCTTCAACGCCTCCCAAAGAACCACTCGTCGAAACCCAATCCCTAATCTCCAATCCCACATCTCCACCTCCGCCTCCACCGCCGCCACCAAGCGCTCCGGCTCCGAACGCTTCAAGTAGCAAATCTTGGAACTTCCTCAAGTACTCCCTCATTGGCGCGATCACTGGAGCCACTGCTGCTGTTGGTTATGTCTCGTATGCATACTCTTTGGATGAAATTGACGAAAAGACCAAGGCTCTCCGAGCAGCACCTTCAACTATCAAGGTGGCAGATGATGCGTCTGCCCTTGAAAAATTTAAAAGTCGGGTATACTCTTCTGCAGTTACAGTTCCTGCTAAAGCAGTTGAAGCTTACATTGATGCAAGGAGGACGATTGAAGAACAAATTCGAGGCTATACTGAACCATATGCGGAGAAGCTTCTTCCAGATTTGCATCCCATGGAGAAACATGTTTTTACCCTTGTTCTGGATCTCCAGGAGACATTACTATACTCTTATTGGACGCGAGAAAAGGGCTGGCAGACTATCAAAAGACCTGGAGTTGATGCTTTTTTGGAACATCTTGCTCAGTTTTATGAAATCATCGTGTATTCAGACTATTCAAATATGTATGTAGATCCTGTAATGGAGAGACTGGACACCAAGCATTGTGTACGATATAGGCTGGGAAAGGCTGCCACTAGGTATCAGAATGGAAAACATTATAGGGACCTTTCAAAACTTAACAGAGATCCAAAAAAGATCATCTATCTGAGTGCACACGCACGAGAAAATAGTCTTCAGCCTGAAAATGGTGCTGTAATAAAGCCATATAAGAATGAGTTAGATGACACAGCTCTTGTGGATTTCATACCATTTCTTGAATTTGTTGCCCGCAATCCTCCAGCAGATATTAGGCAAGTACTAGCATCGTATGAAGGGCGTGATATTCCTGCAGAGTTCATTAGGCGATCTAAAGAGCATCAAAAGCGAATACAAGAATCGAAGCAGCAGGGTCGATTTTGGCGACGTTGA

Protein Analysis

418

Amino Acids

47.32

Weight (kDa)

9.35

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 549
AccII CGCG 2 cut(s) 398, 745
AciI CCGC 5 cut(s) 311, 320, 323, 650, 1114
AclWI GGATC 3 cut(s) 717, 851, 965
AcsI RAATTY 3 cut(s) 533, 624, 1103
AcuI CTGAAG 1 cut(s) 1004
AcyI GRCGYC 1 cut(s) 220
AfaI GTAC 3 cut(s) 383, 894, 1143
AfeI AGCGCT 1 cut(s) 334
AfiI CCNNNNNNNGG 2 cut(s) 706, 1031
AflIII ACRYGT 1 cut(s) 688
AgsI TTSAA 9 cut(s) 246, 354, 495, 530, 587, 617, 843, 957, 1103
AjnI CCWGG 2 cut(s) 714, 775
AluBI AGCT 4 cut(s) 231, 590, 658, 1076
AluI AGCT 4 cut(s) 231, 590, 658, 1076
Alw21I GWGCWC 2 cut(s) 233, 1000
Alw26I GTCTC 4 cut(s) 88, 436, 713, 865
Alw44I GTGCAC 1 cut(s) 996
AlwI GGATC 3 cut(s) 717, 851, 965
AlwNI CAGNNNCTG 1 cut(s) 572
Aor51HI AGCGCT 1 cut(s) 334
AoxI GGCC 1 cut(s) 210
ApaLI GTGCAC 1 cut(s) 996
ApeKI GCWGC 4 cut(s) 416, 485, 914, 1228
ApoI RAATTY 3 cut(s) 533, 624, 1103
Asp700I GAANNNNTTC 1 cut(s) 624
AspLEI GCGC 2 cut(s) 335, 398
AspS9I GGNCC 1 cut(s) 949
AvaII GGWCC 1 cut(s) 949
BaeGI GKGCMC 1 cut(s) 1000
BanII GRGCYC 1 cut(s) 233
BauI CACGAG 1 cut(s) 1005
BbsI GAAGAC 2 cut(s) 234, 1010
Bbv12I GWGCWC 2 cut(s) 233, 1000
BbvI GCAGC 4 cut(s) 403, 497, 901, 1240
BcgI CGANNNNNNTGC 4 cut(s) 150, 184, 1217, 1251
BciT130I CCWGG 2 cut(s) 716, 777
BcoDI GTCTC 4 cut(s) 88, 436, 713, 865
BfaI CTAG 3 cut(s) 158, 921, 1145
BfmI CTRYAG 2 cut(s) 558, 1173
BfoI RGCGCY 1 cut(s) 336
BisI GCNGC 5 cut(s) 323, 417, 486, 915, 1229
BlsI GCNGC 5 cut(s) 324, 418, 487, 916, 1230
BmcAI AGTACT 2 cut(s) 383, 1143
Bme1390I CCNGG 2 cut(s) 716, 777
Bme18I GGWCC 1 cut(s) 949
BmgT120I GGNCC 1 cut(s) 949
BmiI GGNNCC 3 cut(s) 342, 409, 950
BmrFI CCNGG 2 cut(s) 716, 777
BmsI GCATC 6 cut(s) 505, 589, 682, 775, 1157, 1210
BpiI GAAGAC 2 cut(s) 234, 1010
BpmI CTGGAG 4 cut(s) 426, 698, 798, 1107
BpuEI CTTGAG 1 cut(s) 362
BsaBI GATNNNNATC 1 cut(s) 672
BsaHI GRCGYC 1 cut(s) 220
BsaJI CCNNGG 2 cut(s) 471, 678
Bsc4I CCNNNNNNNGG 2 cut(s) 706, 1031
Bse1I ACTGG 2 cut(s) 409, 879
Bse3DI GCAATG 1 cut(s) 168
Bse8I GATNNNNATC 1 cut(s) 672
BseBI CCWGG 2 cut(s) 716, 777
BseDI CCNNGG 2 cut(s) 471, 678
BseGI GGATG 2 cut(s) 457, 673
BseJI GATNNNNATC 1 cut(s) 672
BseLI CCNNNNNNNGG 2 cut(s) 706, 1031
BseMI GCAATG 1 cut(s) 168
BseMII CTCAG 3 cut(s) 30, 821, 983
BseNI ACTGG 2 cut(s) 409, 879
BseRI GAGGAG 1 cut(s) 82
BseSI GKGCMC 1 cut(s) 1000
BseXI GCAGC 4 cut(s) 403, 497, 901, 1240
BseYI CCCAGC 1 cut(s) 904
Bsh1236I CGCG 2 cut(s) 398, 745
BshFI GGCC 1 cut(s) 212
BsiHKAI GWGCWC 2 cut(s) 233, 1000
BsiSI CCGG 1 cut(s) 338
BslFI GGGAC 1 cut(s) 962
BslI CCNNNNNNNGG 2 cut(s) 706, 1031
BsmAI GTCTC 4 cut(s) 88, 436, 713, 865
BsmFI GGGAC 1 cut(s) 962
BsnI GGCC 1 cut(s) 212
Bsp1286I GDGCHC 2 cut(s) 233, 1000
Bsp143I GATC 7 cut(s) 130, 399, 709, 856, 970, 981, 1190
Bsp19I CCATGG 1 cut(s) 678
BspACI CCGC 5 cut(s) 311, 320, 323, 650, 1114
BspANI GGCC 1 cut(s) 212
BspCNI CTCAG 3 cut(s) 29, 820, 984
BspFNI CGCG 2 cut(s) 398, 745
BspLI GGNNCC 3 cut(s) 342, 409, 950
BspMAI CTGCAG 2 cut(s) 562, 1177
BspPI GGATC 3 cut(s) 717, 851, 965
BsrDI GCAATG 1 cut(s) 168
BsrI ACTGG 2 cut(s) 409, 879
BssECI CCNNGG 2 cut(s) 471, 678
BssMI GATC 7 cut(s) 130, 399, 709, 856, 970, 981, 1190
BssNAI GTATAC 1 cut(s) 550
BssNI GRCGYC 1 cut(s) 220
BssSI CACGAG 1 cut(s) 1005
BssT1I CCWWGG 2 cut(s) 471, 678
Bst1107I GTATAC 1 cut(s) 550
Bst2BI CACGAG 1 cut(s) 1005
Bst2UI CCWGG 2 cut(s) 716, 777
Bst4CI ACNGT 1 cut(s) 568
Bst6I CTCTTC 1 cut(s) 559
BstACI GRCGYC 1 cut(s) 220
BstAPI GCANNNNNTGC 1 cut(s) 515
BstC8I GCNNGC 2 cut(s) 758, 1114
BstDEI CTNAG 3 cut(s) 16, 807, 992
BstDSI CCRYGG 1 cut(s) 678
BstF5I GGATG 2 cut(s) 457, 673
BstFNI CGCG 2 cut(s) 398, 745
BstH2I RGCGCY 1 cut(s) 336
BstHHI GCGC 2 cut(s) 335, 398
BstKTI GATC 7 cut(s) 133, 402, 712, 859, 973, 984, 1193
BstMAI GTCTC 4 cut(s) 88, 436, 713, 865
BstMBI GATC 7 cut(s) 130, 399, 709, 856, 970, 981, 1190
BstMWI GCNNNNNNNGC 8 cut(s) 228, 319, 347, 416, 482, 515, 587, 1207
BstNI CCWGG 2 cut(s) 716, 777
BstNSI RCATGY 1 cut(s) 692
BstSCI CCNGG 2 cut(s) 714, 775
BstSFI CTRYAG 2 cut(s) 558, 1173
BstSLI GKGCMC 1 cut(s) 1000
BstUI CGCG 2 cut(s) 398, 745
BstV1I GCAGC 4 cut(s) 403, 497, 901, 1240
BstV2I GAAGAC 2 cut(s) 234, 1010
BstX2I RGATCY 3 cut(s) 709, 856, 970
BstYI RGATCY 3 cut(s) 709, 856, 970
BstZ17I GTATAC 1 cut(s) 550
BsuRI GGCC 1 cut(s) 212
BtgI CCRYGG 1 cut(s) 678
BtsCI GGATG 2 cut(s) 457, 673
BtsI GCAGTG 1 cut(s) 411
BtsIMutI CAGTG 2 cut(s) 402, 411
Cac8I GCNNGC 2 cut(s) 758, 1114
CaiI CAGNNNCTG 1 cut(s) 572
CfoI GCGC 2 cut(s) 335, 398
Cfr13I GGNCC 1 cut(s) 949
CseI GACGC 3 cut(s) 228, 507, 751
Csp6I GTAC 3 cut(s) 382, 893, 1142
CviAII CATG 2 cut(s) 679, 689
CviQI GTAC 3 cut(s) 382, 893, 1142
DdeI CTNAG 3 cut(s) 16, 807, 992
DpnI GATC 7 cut(s) 132, 401, 711, 858, 972, 983, 1192
DpnII GATC 7 cut(s) 130, 399, 709, 856, 970, 981, 1190
DraI TTTAAA 1 cut(s) 538
Eam1104I CTCTTC 1 cut(s) 559
EarI CTCTTC 1 cut(s) 559
EciI GGCGGA 1 cut(s) 300
Ecl136II GAGCTC 1 cut(s) 231
Eco130I CCWWGG 2 cut(s) 471, 678
Eco24I GRGCYC 1 cut(s) 233
Eco47I GGWCC 1 cut(s) 949
Eco47III AGCGCT 1 cut(s) 334
Eco53kI GAGCTC 1 cut(s) 231
Eco57I CTGAAG 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 231
EcoO109I RGGNCCY 1 cut(s) 949
EcoRII CCWGG 2 cut(s) 714, 775
EcoT14I CCWWGG 2 cut(s) 471, 678
EcoT22I ATGCAT 1 cut(s) 442
EcoT38I GRGCYC 1 cut(s) 233
ErhI CCWWGG 2 cut(s) 471, 678
FaeI CATG 2 cut(s) 682, 692
FaqI GGGAC 1 cut(s) 962
FatI CATG 2 cut(s) 678, 688
FauI CCCGC 1 cut(s) 1121
FauNDI CATATG 1 cut(s) 646
FblI GTMKAC 1 cut(s) 549
Fnu4HI GCNGC 5 cut(s) 323, 417, 486, 915, 1229
FokI GGATG 2 cut(s) 464, 660
FriOI GRGCYC 1 cut(s) 233
Fsp4HI GCNGC 5 cut(s) 323, 417, 486, 915, 1229
FspBI CTAG 3 cut(s) 158, 921, 1145
GlaI GCGC 2 cut(s) 334, 397
GluI GCNGC 5 cut(s) 323, 417, 486, 915, 1229
GsaI CCCAGC 1 cut(s) 908
GsuI CTGGAG 4 cut(s) 426, 698, 798, 1107
HaeII RGCGCY 1 cut(s) 336
HaeIII GGCC 1 cut(s) 212
HapII CCGG 1 cut(s) 338
HgaI GACGC 3 cut(s) 228, 507, 751
HhaI GCGC 2 cut(s) 335, 398
Hin1I GRCGYC 1 cut(s) 220
Hin1II CATG 2 cut(s) 682, 692
Hin6I GCGC 2 cut(s) 333, 396
HinP1I GCGC 2 cut(s) 333, 396
HindIII AAGCTT 2 cut(s) 588, 656
HinfI GANTC 1 cut(s) 1220
HpaII CCGG 1 cut(s) 338
Hpy166II GTNNAC 4 cut(s) 191, 550, 893, 998
Hpy188I TCNGA 6 cut(s) 235, 345, 482, 835, 930, 993
Hpy188III TCNNGA 3 cut(s) 665, 707, 1100
Hpy8I GTNNAC 4 cut(s) 191, 550, 893, 998
Hpy99I CGWCG 2 cut(s) 272, 1251
HpyAV CCTTC 3 cut(s) 67, 501, 1151
HpyCH4III ACNGT 1 cut(s) 568
HpyCH4IV ACGT 1 cut(s) 1249
HpyCH4V TGCA 6 cut(s) 440, 560, 602, 673, 998, 1175
HpyF10VI GCNNNNNNNGC 8 cut(s) 228, 319, 347, 416, 482, 515, 587, 1207
HpyF3I CTNAG 3 cut(s) 16, 807, 992
HpySE526I ACGT 1 cut(s) 1249
Hsp92I GRCGYC 1 cut(s) 220
Hsp92II CATG 2 cut(s) 682, 692
HspAI GCGC 2 cut(s) 333, 396
Kzo9I GATC 7 cut(s) 130, 399, 709, 856, 970, 981, 1190
LmnI GCTCC 4 cut(s) 236, 340, 346, 407
Lsp1109I GCAGC 4 cut(s) 403, 497, 901, 1240
LweI GCATC 6 cut(s) 505, 589, 682, 775, 1157, 1210
MaeI CTAG 3 cut(s) 158, 921, 1145
MaeII ACGT 1 cut(s) 1249
MaeIII GTNAC 1 cut(s) 562
MalI GATC 7 cut(s) 132, 401, 711, 858, 972, 983, 1192
MboI GATC 7 cut(s) 130, 399, 709, 856, 970, 981, 1190
MboII GAAGA 5 cut(s) 234, 546, 629, 653, 1010
MflI RGATCY 3 cut(s) 709, 856, 970
MhlI GDGCHC 2 cut(s) 233, 1000
MluCI AATT 5 cut(s) 4, 456, 533, 624, 1103
Mph1103I ATGCAT 1 cut(s) 442
MroXI GAANNNNTTC 1 cut(s) 624
MseI TTAA 3 cut(s) 206, 537, 963
MspI CCGG 1 cut(s) 338
MspR9I CCNGG 2 cut(s) 716, 777
MvaI CCWGG 2 cut(s) 716, 777
MvnI CGCG 2 cut(s) 398, 745
MwoI GCNNNNNNNGC 8 cut(s) 228, 319, 347, 416, 482, 515, 587, 1207
NcoI CCATGG 1 cut(s) 678
NdeI CATATG 1 cut(s) 646
NdeII GATC 7 cut(s) 130, 399, 709, 856, 970, 981, 1190
NlaIII CATG 2 cut(s) 682, 692
NlaIV GGNNCC 3 cut(s) 342, 409, 950
NmeAIII GCCGAG 1 cut(s) 178
NsiI ATGCAT 1 cut(s) 442
NspI RCATGY 1 cut(s) 692
PciI ACATGT 1 cut(s) 688
PcsI WCGNNNNNNNCGW 1 cut(s) 1243
PdmI GAANNNNTTC 1 cut(s) 624
PfeI GAWTC 1 cut(s) 1220
PfoI TCCNGGA 1 cut(s) 714
PkrI GCNGC 5 cut(s) 324, 418, 487, 916, 1230
PpuMI RGGWCCY 1 cut(s) 949
PscI ACATGT 1 cut(s) 688
Psp124BI GAGCTC 1 cut(s) 233
Psp5II RGGWCCY 1 cut(s) 949
Psp6I CCWGG 2 cut(s) 714, 775
PspFI CCCAGC 1 cut(s) 904
PspGI CCWGG 2 cut(s) 714, 775
PspN4I GGNNCC 3 cut(s) 342, 409, 950
PspPI GGNCC 1 cut(s) 949
PspPPI RGGWCCY 1 cut(s) 949
PstI CTGCAG 2 cut(s) 562, 1177
PstNI CAGNNNCTG 1 cut(s) 572
PsuI RGATCY 3 cut(s) 709, 856, 970
RsaI GTAC 3 cut(s) 383, 894, 1143
RsaNI GTAC 3 cut(s) 382, 893, 1142
SacI GAGCTC 1 cut(s) 233
SaqAI TTAA 3 cut(s) 206, 537, 963
SatI GCNGC 5 cut(s) 323, 417, 486, 915, 1229
Sau3AI GATC 7 cut(s) 130, 399, 709, 856, 970, 981, 1190
Sau96I GGNCC 1 cut(s) 949
ScaI AGTACT 2 cut(s) 383, 1143
ScrFI CCNGG 2 cut(s) 716, 777
SduI GDGCHC 2 cut(s) 233, 1000
SfaNI GCATC 6 cut(s) 505, 589, 682, 775, 1157, 1210
SfcI CTRYAG 2 cut(s) 558, 1173
SinI GGWCC 1 cut(s) 949
SmlI CTYRAG 1 cut(s) 377
SmoI CTYRAG 1 cut(s) 377
Sse9I AATT 5 cut(s) 4, 456, 533, 624, 1103
SsiI CCGC 5 cut(s) 311, 320, 323, 650, 1114
SspMI CTAG 3 cut(s) 158, 921, 1145
SstI GAGCTC 1 cut(s) 233
StyD4I CCNGG 2 cut(s) 714, 775
StyI CCWWGG 2 cut(s) 471, 678
TaaI ACNGT 1 cut(s) 568
TaiI ACGT 1 cut(s) 1252
TaqI TCGA 5 cut(s) 170, 270, 628, 1223, 1237
TasI AATT 5 cut(s) 4, 456, 533, 624, 1103
TatI WGTACW 2 cut(s) 381, 1141
TauI GCSGC 1 cut(s) 325
TfiI GAWTC 1 cut(s) 1220
Tru1I TTAA 3 cut(s) 206, 537, 963
Tru9I TTAA 3 cut(s) 206, 537, 963
TscAI CASTG 2 cut(s) 409, 418
TseI GCWGC 4 cut(s) 416, 485, 914, 1228
TspDTI ATGAA 6 cut(s) 17, 468, 831, 1078, 1170, 1171
TspRI CASTG 2 cut(s) 409, 418
VneI GTGCAC 1 cut(s) 996
VpaK11BI GGWCC 1 cut(s) 949
XapI RAATTY 3 cut(s) 533, 624, 1103
XceI RCATGY 1 cut(s) 692
XmiI GTMKAC 1 cut(s) 549
XmnI GAANNNNTTC 1 cut(s) 624
XspI CTAG 3 cut(s) 158, 921, 1145
ZrmI AGTACT 2 cut(s) 383, 1143
Zsp2I ATGCAT 1 cut(s) 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.