pycom03g20850

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
21257274 .. 21260304
3031 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g20850.6

Sequence Viewer

Length: 1593 bp
ATGACAGATGAGAATTGCAAGAAAAGCAAGCTTTCATGGCCCAAGACACTGGTTAAAAAATGGTTCAACATCAAGAGCAAAGCCGAGGACTTCGATGCAGACGACGCCGTTTATGGAGGCATTCGGATAGAATCCGGCGGGGTAAGATTGATATGGAAGCATCACAAGTTACAGATGTACATAATTATAGCGATCTTTGTAGCTACATGGAACGTGGCTGGAAAATCTCCTCCAAGTTGTTTGAATCTCGAAGATTGGCTTCATACCTCTCTTCCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATAGTTCCTTTGAATGCTGGCAATGTTTTAGGCACGGAAGACATCGGGCCAGCTAAAAAGTGGCTAGCTCTTATAAGGAAGACTCTAAATAATCTTCCTGGAACAAGCGGTGCTTGCCATACACCTTCACCAGTTTCTGATCCGATTGTAGAATTAGACGCGGACTTTGAGGGATCAACTAGGCAGAAGGCTTCCTCTTTCTTTCACCGCAGGTCCTTCCAATCCTTGAGCCGCAGCATGAGAATGGACAATGACATATCAATGCCACAACCCAGACATGATAGGCGATTCAGCGTTTGTGATCAGGTTATGTTTGGGCACAGACCAAGTGATTATGATCCCAATTACAGATGGGGTTCCTCTGATGATGAGCATGTACCTGGTGATTCACCTGTTGTGACACATTATTCACCAATGTCCAACAGTGGGTCTTTCTCAATGGAGGATAGAGATAGACAGCTAGGCCACTCGAGATACTGCTTAGTTGCCAGCAAACAAATGGTTGGTATATTTTTGACAGTGTGGGTAAAAAGTGATCTGCGAGATGATGTTCGCAATTTGAAAGTGTCTTGTGTTGGAAGAGGATTAATGGGCTATCTCGGAAATAAGGGTTCAATTTCCATTAGCATGTCTTTGCATCAAACAAGCTTTTGCTTCATCTGTACTCATCTGACCTCGGGGCAGAAGGAAGGAGATGAACTTCGTAGGAATTCTGATGTCATGGAGATCCTTAGAAAGACAAGGTTTCCCTGGGTTCATGGCATGGGAGACGAAAACTCTCCTCAGACTATACTAGAGCATGATCGAATTATTTGGCTTGGGGATTTGAATTATCGCATTGCCCTTTCTTACCGCTCTGCAAAAGCTCTTGTTGAGATGCGCAACTGGAGGGCATTGTTAGAGAATGACCAGCTACGAATAGAGCAAAGAAGAGGACGCGTTTTTGAGGGTTGGAATGAAGGGAGGATATATTTCCCTCCGACTTACAAGTATTTAAATAATTCAGATCGGTATGCAGGTGATGATAGGCACACCAAGGAGAAGCGAAGAACTCCAGCATGGTGTGATCGTATATTATGGTATGGAAGAGGCCTCCATCAATTATCTTATGTTCGTGGGGAGTCGAGATTCTCAGATCATAGGCCAGTCTACGGCGTATTCCTGGCAGAGGTTGAGTCCATTAACCGAAGCCGAATAAAAAAAAGCATGAGTTGTTCCAGTTCCAGAATCGAGGTAGAGGAGCTGTTGCCACATTCTCATACATACACCGGCCTTAATTTCTATTGA

Protein Analysis

531

Amino Acids

60.9

Weight (kDa)

8.91

Isoelectric Point (pI)

54.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G63240 AT3G63240
fragaria_vesca FvH4_2g23170
malus_domestica MD03G1261100.v1.1 MD11G1281400.v1.1
prunus_persica Prupe.8G236900_v2.0.a1
pyrus_communis pycom03g20850 pycom11g24940
rosa_chinensis RchiOBHm_Chr6g0290421
rosa_laevigata RLG00000012220
rosa_multiflora Rmu_sc0002890.1_g000001
rosa_roxburghii Rroxscaffold_7G00177080
rosa_rugosa Rorug06G0212600
rosa_samantha Rh6AG322600 Rh6BG330100 Rh6CG336100
rosa_wichuraiana Rw6G027880 Rw6G027970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 380
AarI CACCTGC 1 cut(s) 1313
Acc16I TGCGCA 1 cut(s) 1187
Acc36I ACCTGC 2 cut(s) 507, 1313
AccBSI CCGCTC 1 cut(s) 1161
AccI GTMKAC 1 cut(s) 1455
AccII CGCG 2 cut(s) 467, 1245
AciI CCGC 6 cut(s) 138, 414, 467, 514, 538, 1159
AclWI GGATC 4 cut(s) 440, 487, 638, 1027
AcsI RAATTY 1 cut(s) 1015
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 3 cut(s) 179, 684, 970
AfiI CCNNNNNNNGG 3 cut(s) 732, 1457, 1474
AflIII ACRYGT 1 cut(s) 1243
AgsI TTSAA 7 cut(s) 67, 244, 302, 319, 868, 921, 1135
AjnI CCWGG 4 cut(s) 403, 685, 1055, 1467
AluBI AGCT 9 cut(s) 31, 203, 359, 374, 766, 954, 1172, 1219, 1549
AluI AGCT 9 cut(s) 31, 203, 359, 374, 766, 954, 1172, 1219, 1549
Alw26I GTCTC 1 cut(s) 1068
AlwI GGATC 4 cut(s) 440, 487, 638, 1027
AlwNI CAGNNNCTG 1 cut(s) 443
Ama87I CYCGRG 2 cut(s) 775, 982
AoxI GGCC 6 cut(s) 38, 353, 769, 1396, 1448, 1576
ApeKI GCWGC 1 cut(s) 540
ApoI RAATTY 1 cut(s) 1015
ArsI GACNNNNNNTTYG 2 cut(s) 455, 487
AseI ATTAAT 1 cut(s) 893
Asp700I GAANNNNTTC 1 cut(s) 309
AspLEI GCGC 1 cut(s) 1188
AspS9I GGNCC 3 cut(s) 39, 353, 519
AsuHPI GGTGA 6 cut(s) 426, 503, 687, 701, 708, 1337
AsuNHI GCTAGC 1 cut(s) 370
AvaI CYCGRG 2 cut(s) 775, 982
AvaII GGWCC 1 cut(s) 519
BaeGI GKGCMC 1 cut(s) 627
BbsI GAAGAC 2 cut(s) 351, 392
BbvI GCAGC 1 cut(s) 552
BccI CCATC 2 cut(s) 651, 1410
BceAI ACGGC 2 cut(s) 92, 1474
BciT130I CCWGG 4 cut(s) 405, 687, 1057, 1469
BclI TGATCA 1 cut(s) 607
BcoDI GTCTC 1 cut(s) 1068
BfaI CTAG 4 cut(s) 371, 486, 767, 1100
BfuAI ACCTGC 2 cut(s) 507, 1313
BisI GCNGC 2 cut(s) 538, 541
BlsI GCNGC 2 cut(s) 539, 542
Bme1390I CCNGG 4 cut(s) 405, 687, 1057, 1469
Bme18I GGWCC 1 cut(s) 519
BmeT110I CYCGRG 2 cut(s) 775, 982
BmgT120I GGNCC 3 cut(s) 39, 353, 519
BmiI GGNNCC 1 cut(s) 664
BmrFI CCNGG 4 cut(s) 405, 687, 1057, 1469
BmsI GCATC 4 cut(s) 85, 169, 952, 1173
BmtI GCTAGC 1 cut(s) 374
BpiI GAAGAC 2 cut(s) 351, 392
BpmI CTGGAG 2 cut(s) 1213, 1344
BpuEI CTTGAG 1 cut(s) 553
BsaBI GATNNNNATC 1 cut(s) 642
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 5 cut(s) 84, 981, 1055, 1056, 1341
Bsc4I CCNNNNNNNGG 3 cut(s) 732, 1457, 1474
Bse118I RCCGGY 1 cut(s) 1574
Bse1I ACTGG 5 cut(s) 54, 437, 1196, 1451, 1524
Bse3DI GCAATG 2 cut(s) 334, 1143
Bse8I GATNNNNATC 1 cut(s) 642
BseBI CCWGG 4 cut(s) 405, 687, 1057, 1469
BseDI CCNNGG 5 cut(s) 84, 981, 1055, 1056, 1341
BseJI GATNNNNATC 1 cut(s) 642
BseLI CCNNNNNNNGG 3 cut(s) 732, 1457, 1474
BseMI GCAATG 2 cut(s) 334, 1143
BseMII CTCAG 2 cut(s) 1103, 1452
BseNI ACTGG 5 cut(s) 54, 437, 1196, 1451, 1524
BseRI GAGGAG 3 cut(s) 219, 1077, 1559
BseSI GKGCMC 1 cut(s) 627
BseXI GCAGC 1 cut(s) 552
Bsh1236I CGCG 2 cut(s) 467, 1245
BshFI GGCC 6 cut(s) 40, 355, 771, 1398, 1450, 1578
BsiHKCI CYCGRG 2 cut(s) 775, 982
BsiSI CCGG 2 cut(s) 135, 1575
BslI CCNNNNNNNGG 3 cut(s) 732, 1457, 1474
BsmAI GTCTC 1 cut(s) 1068
BsmBI CGTCTC 1 cut(s) 1068
BsmI GAATGC 2 cut(s) 120, 325
BsnI GGCC 6 cut(s) 40, 355, 771, 1398, 1450, 1578
BsoBI CYCGRG 2 cut(s) 775, 982
Bsp1286I GDGCHC 1 cut(s) 627
Bsp1407I TGTACA 1 cut(s) 177
BspACI CCGC 6 cut(s) 138, 414, 467, 514, 538, 1159
BspANI GGCC 6 cut(s) 40, 355, 771, 1398, 1450, 1578
BspCNI CTCAG 2 cut(s) 1102, 1451
BspFNI CGCG 2 cut(s) 467, 1245
BspLI GGNNCC 1 cut(s) 664
BspMI ACCTGC 2 cut(s) 507, 1313
BspOI GCTAGC 1 cut(s) 374
BspPI GGATC 4 cut(s) 440, 487, 638, 1027
BsrBI CCGCTC 1 cut(s) 1161
BsrDI GCAATG 2 cut(s) 334, 1143
BsrFI RCCGGY 1 cut(s) 1574
BsrGI TGTACA 1 cut(s) 177
BsrI ACTGG 5 cut(s) 54, 437, 1196, 1451, 1524
BssAI RCCGGY 1 cut(s) 1574
BssECI CCNNGG 5 cut(s) 84, 981, 1055, 1056, 1341
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 1341
Bst2UI CCWGG 4 cut(s) 405, 687, 1057, 1469
Bst4CI ACNGT 2 cut(s) 731, 826
Bst6I CTCTTC 4 cut(s) 276, 880, 1231, 1387
BstACI GRCGYC 1 cut(s) 105
BstAUI TGTACA 1 cut(s) 177
BstC8I GCNNGC 6 cut(s) 29, 325, 357, 372, 421, 796
BstDEI CTNAG 4 cut(s) 787, 1037, 1089, 1438
BstENI CCTNNNNNAGG 1 cut(s) 1472
BstFNI CGCG 2 cut(s) 467, 1245
BstHHI GCGC 1 cut(s) 1188
BstMAI GTCTC 1 cut(s) 1068
BstMWI GCNNNNNNNGC 4 cut(s) 24, 37, 104, 420
BstNI CCWGG 4 cut(s) 405, 687, 1057, 1469
BstNSI RCATGY 2 cut(s) 683, 937
BstSCI CCNGG 4 cut(s) 403, 685, 1055, 1467
BstSLI GKGCMC 1 cut(s) 627
BstUI CGCG 2 cut(s) 467, 1245
BstV1I GCAGC 1 cut(s) 552
BstV2I GAAGAC 2 cut(s) 351, 392
BstX2I RGATCY 1 cut(s) 1032
BstXI CCANNNNNNTGG 1 cut(s) 49
BstYI RGATCY 1 cut(s) 1032
BsuRI GGCC 6 cut(s) 40, 355, 771, 1398, 1450, 1578
BtsIMutI CAGTG 3 cut(s) 47, 736, 831
BveI ACCTGC 2 cut(s) 507, 1313
Cac8I GCNNGC 6 cut(s) 29, 325, 357, 372, 421, 796
CaiI CAGNNNCTG 1 cut(s) 443
CfoI GCGC 1 cut(s) 1188
Cfr10I RCCGGY 1 cut(s) 1574
Cfr13I GGNCC 3 cut(s) 39, 353, 519
CseI GACGC 3 cut(s) 113, 473, 1251
CsiI ACCWGGT 1 cut(s) 685
Csp6I GTAC 3 cut(s) 178, 683, 969
CviQI GTAC 3 cut(s) 178, 683, 969
DdeI CTNAG 4 cut(s) 787, 1037, 1089, 1438
DraI TTTAAA 1 cut(s) 1302
Eam1104I CTCTTC 4 cut(s) 276, 880, 1231, 1387
EarI CTCTTC 4 cut(s) 276, 880, 1231, 1387
Eco130I CCWWGG 1 cut(s) 1341
Eco147I AGGCCT 1 cut(s) 1398
Eco32I GATATC 1 cut(s) 283
Eco47I GGWCC 1 cut(s) 519
Eco88I CYCGRG 2 cut(s) 775, 982
EcoNI CCTNNNNNAGG 1 cut(s) 1472
EcoO109I RGGNCCY 1 cut(s) 519
EcoRI GAATTC 1 cut(s) 1015
EcoRII CCWGG 4 cut(s) 403, 685, 1055, 1467
EcoRV GATATC 1 cut(s) 283
EcoT14I CCWWGG 1 cut(s) 1341
ErhI CCWWGG 1 cut(s) 1341
Esp3I CGTCTC 1 cut(s) 1068
FalI AAGNNNNNCTT 4 cut(s) 243, 275, 403, 435
FauI CCCGC 1 cut(s) 131
FbaI TGATCA 1 cut(s) 607
FblI GTMKAC 1 cut(s) 1455
Fnu4HI GCNGC 2 cut(s) 538, 541
Fsp4HI GCNGC 2 cut(s) 538, 541
FspBI CTAG 4 cut(s) 371, 486, 767, 1100
FspI TGCGCA 1 cut(s) 1187
GlaI GCGC 1 cut(s) 1187
GluI GCNGC 2 cut(s) 538, 541
GsuI CTGGAG 2 cut(s) 1213, 1344
HaeIII GGCC 6 cut(s) 40, 355, 771, 1398, 1450, 1578
HapII CCGG 2 cut(s) 135, 1575
HgaI GACGC 3 cut(s) 113, 473, 1251
HhaI GCGC 1 cut(s) 1188
Hin1I GRCGYC 1 cut(s) 105
Hin6I GCGC 1 cut(s) 1186
HinP1I GCGC 1 cut(s) 1186
HindIII AAGCTT 2 cut(s) 29, 952
HinfI GANTC 9 cut(s) 131, 244, 388, 594, 692, 1427, 1434, 1481, 1533
HpaII CCGG 2 cut(s) 135, 1575
HphI GGTGA 6 cut(s) 426, 503, 687, 701, 708, 1337
Hpy166II GTNNAC 1 cut(s) 1456
Hpy188III TCNNGA 6 cut(s) 73, 248, 302, 777, 1431, 1530
Hpy8I GTNNAC 1 cut(s) 1456
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 6 cut(s) 441, 487, 532, 985, 989, 1259
HpyCH4III ACNGT 2 cut(s) 731, 826
HpyCH4IV ACGT 1 cut(s) 213
HpyCH4V TGCA 5 cut(s) 18, 98, 943, 1166, 1322
HpyF10VI GCNNNNNNNGC 4 cut(s) 24, 37, 104, 420
HpyF3I CTNAG 4 cut(s) 787, 1037, 1089, 1438
HpySE526I ACGT 1 cut(s) 213
Hsp92I GRCGYC 1 cut(s) 105
HspAI GCGC 1 cut(s) 1186
Ksp22I TGATCA 1 cut(s) 607
LmnI GCTCC 1 cut(s) 1546
Lsp1109I GCAGC 1 cut(s) 552
LweI GCATC 4 cut(s) 85, 169, 952, 1173
MabI ACCWGGT 1 cut(s) 685
MaeI CTAG 4 cut(s) 371, 486, 767, 1100
MaeII ACGT 1 cut(s) 213
MaeIII GTNAC 2 cut(s) 168, 703
MbiI CCGCTC 1 cut(s) 1161
MboII GAAGA 9 cut(s) 263, 263, 356, 392, 397, 897, 1248, 1365, 1404
MflI RGATCY 1 cut(s) 1032
MhlI GDGCHC 1 cut(s) 627
MluI ACGCGT 1 cut(s) 1243
MlyI GAGTC 3 cut(s) 382, 1436, 1490
MmeI TCCRAC 4 cut(s) 750, 862, 1238, 1310
MroXI GAANNNNTTC 1 cut(s) 309
MseI TTAA 5 cut(s) 54, 893, 1301, 1488, 1581
MslI CAYNNNNRTG 3 cut(s) 548, 566, 932
MspI CCGG 2 cut(s) 135, 1575
MspR9I CCNGG 4 cut(s) 405, 687, 1057, 1469
Mva1269I GAATGC 2 cut(s) 120, 325
MvaI CCWGG 4 cut(s) 405, 687, 1057, 1469
MvnI CGCG 2 cut(s) 467, 1245
MwoI GCNNNNNNNGC 4 cut(s) 24, 37, 104, 420
NheI GCTAGC 1 cut(s) 370
NlaIV GGNNCC 1 cut(s) 664
NmeAIII GCCGAG 1 cut(s) 109
NmuCI GTSAC 1 cut(s) 703
NsbI TGCGCA 1 cut(s) 1187
NspI RCATGY 2 cut(s) 683, 937
PaeR7I CTCGAG 1 cut(s) 775
PaqCI CACCTGC 1 cut(s) 1313
PasI CCCWGGG 1 cut(s) 1056
PceI AGGCCT 1 cut(s) 1398
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PctI GAATGC 2 cut(s) 120, 325
PdmI GAANNNNTTC 1 cut(s) 309
PfeI GAWTC 6 cut(s) 131, 244, 594, 692, 1434, 1533
PfoI TCCNGGA 1 cut(s) 403
PkrI GCNGC 2 cut(s) 539, 542
PleI GAGTC 3 cut(s) 382, 1435, 1489
PpsI GAGTC 3 cut(s) 382, 1435, 1489
PpuMI RGGWCCY 1 cut(s) 519
PshBI ATTAAT 1 cut(s) 893
PsiI TTATAA 1 cut(s) 380
Psp5II RGGWCCY 1 cut(s) 519
Psp6I CCWGG 4 cut(s) 403, 685, 1055, 1467
PspGI CCWGG 4 cut(s) 403, 685, 1055, 1467
PspN4I GGNNCC 1 cut(s) 664
PspPI GGNCC 3 cut(s) 39, 353, 519
PspPPI RGGWCCY 1 cut(s) 519
PstNI CAGNNNCTG 1 cut(s) 443
PsuI RGATCY 1 cut(s) 1032
RsaI GTAC 3 cut(s) 179, 684, 970
RsaNI GTAC 3 cut(s) 178, 683, 969
RseI CAYNNNNRTG 3 cut(s) 548, 566, 932
SaqAI TTAA 5 cut(s) 54, 893, 1301, 1488, 1581
SatI GCNGC 2 cut(s) 538, 541
Sau96I GGNCC 3 cut(s) 39, 353, 519
SchI GAGTC 3 cut(s) 382, 1436, 1490
ScrFI CCNGG 4 cut(s) 405, 687, 1057, 1469
SduI GDGCHC 1 cut(s) 627
SexAI ACCWGGT 1 cut(s) 685
SfaNI GCATC 4 cut(s) 85, 169, 952, 1173
Sfr274I CTCGAG 1 cut(s) 775
SinI GGWCC 1 cut(s) 519
SlaI CTCGAG 1 cut(s) 775
SmiI ATTTAAAT 1 cut(s) 1302
SmiMI CAYNNNNRTG 3 cut(s) 548, 566, 932
SmlI CTYRAG 2 cut(s) 532, 775
SmoI CTYRAG 2 cut(s) 532, 775
SseBI AGGCCT 1 cut(s) 1398
SsiI CCGC 6 cut(s) 138, 414, 467, 514, 538, 1159
SspMI CTAG 4 cut(s) 371, 486, 767, 1100
StuI AGGCCT 1 cut(s) 1398
StyD4I CCNGG 4 cut(s) 403, 685, 1055, 1467
StyI CCWWGG 1 cut(s) 1341
SwaI ATTTAAAT 1 cut(s) 1302
TaaI ACNGT 2 cut(s) 731, 826
TaiI ACGT 1 cut(s) 216
TaqI TCGA 6 cut(s) 93, 249, 776, 1111, 1430, 1536
TatI WGTACW 2 cut(s) 177, 968
TauI GCSGC 1 cut(s) 540
TfiI GAWTC 6 cut(s) 131, 244, 594, 692, 1434, 1533
Tru1I TTAA 5 cut(s) 54, 893, 1301, 1488, 1581
Tru9I TTAA 5 cut(s) 54, 893, 1301, 1488, 1581
TscAI CASTG 3 cut(s) 54, 736, 831
TseFI GTSAC 1 cut(s) 703
TseI GCWGC 1 cut(s) 540
Tsp45I GTSAC 1 cut(s) 703
TspDTI ATGAA 6 cut(s) 24, 251, 952, 1017, 1052, 1278
TspGWI ACGGA 1 cut(s) 356
TspRI CASTG 3 cut(s) 54, 736, 831
VpaK11BI GGWCC 1 cut(s) 519
VspI ATTAAT 1 cut(s) 893
XagI CCTNNNNNAGG 1 cut(s) 1472
XapI RAATTY 1 cut(s) 1015
XceI RCATGY 2 cut(s) 683, 937
XcmI CCANNNNNNNNNTGG 2 cut(s) 363, 802
XhoI CTCGAG 1 cut(s) 775
XmiI GTMKAC 1 cut(s) 1455
XmnI GAANNNNTTC 1 cut(s) 309
XspI CTAG 4 cut(s) 371, 486, 767, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.