EID1-like F-box protein 3
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63060 |
| fragaria_vesca | FvH4_2g23930 |
| malus_domestica | MD03G1268700.v1.1 |
| prunus_persica | Prupe.8G244600_v2.0.a1 |
| pyrus_communis | pycom03g21440 |
| rosa_chinensis | RchiOBHm_Chr6g0291561 |
| rosa_laevigata | RLG00000012107 |
| rosa_multiflora | Rmu_sc0002226.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00175970 |
| rosa_rugosa | Rorug06G0220200 |
| rosa_samantha | Rh6AG332600 Rh6BG339400 Rh6CG345700 Rh6DG333000 |
| rosa_wichuraiana | Rw6G028880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 425 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 145, 150 |
| AccBSI | CCGCTC | 4 cut(s) | 82, 118, 604, 729 |
| AccIII | TCCGGA | 1 cut(s) | 26 |
| AclWI | GGATC | 3 cut(s) | 100, 113, 302 |
| AcoI | YGGCCR | 1 cut(s) | 289 |
| AcsI | RAATTY | 3 cut(s) | 18, 30, 361 |
| AcyI | GRCGYC | 1 cut(s) | 422 |
| AfaI | GTAC | 2 cut(s) | 242, 470 |
| AfeI | AGCGCT | 1 cut(s) | 165 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 145, 150, 256, 291, 386, 623, 636 |
| AgsI | TTSAA | 1 cut(s) | 367 |
| AluBI | AGCT | 6 cut(s) | 196, 232, 325, 435, 595, 855 |
| AluI | AGCT | 6 cut(s) | 196, 232, 325, 435, 595, 855 |
| Alw21I | GWGCWC | 1 cut(s) | 234 |
| Alw26I | GTCTC | 1 cut(s) | 55 |
| AlwI | GGATC | 3 cut(s) | 100, 113, 302 |
| Ama87I | CYCGRG | 2 cut(s) | 385, 596 |
| Aor13HI | TCCGGA | 1 cut(s) | 26 |
| Aor51HI | AGCGCT | 1 cut(s) | 165 |
| AoxI | GGCC | 3 cut(s) | 289, 627, 920 |
| ApaI | GGGCCC | 2 cut(s) | 631, 924 |
| ApeKI | GCWGC | 1 cut(s) | 217 |
| ApoI | RAATTY | 3 cut(s) | 18, 30, 361 |
| AspLEI | GCGC | 8 cut(s) | 166, 248, 255, 268, 283, 674, 679, 704 |
| AspS9I | GGNCC | 6 cut(s) | 84, 627, 628, 841, 920, 921 |
| AsuC2I | CCSGG | 3 cut(s) | 200, 386, 387 |
| AsuHPI | GGTGA | 5 cut(s) | 196, 382, 383, 601, 833 |
| AvaI | CYCGRG | 2 cut(s) | 385, 596 |
| AvaII | GGWCC | 2 cut(s) | 84, 841 |
| BaeGI | GKGCMC | 3 cut(s) | 631, 735, 924 |
| BamHI | GGATCC | 1 cut(s) | 105 |
| BanII | GRGCYC | 4 cut(s) | 234, 631, 660, 924 |
| BauI | CACGAG | 1 cut(s) | 755 |
| BbsI | GAAGAC | 1 cut(s) | 127 |
| Bbv12I | GWGCWC | 1 cut(s) | 234 |
| BbvI | GCAGC | 1 cut(s) | 204 |
| BccI | CCATC | 4 cut(s) | 300, 490, 787, 889 |
| BceAI | ACGGC | 8 cut(s) | 26, 304, 599, 666, 715, 757, 814, 885 |
| BciVI | GTATCC | 1 cut(s) | 114 |
| BcnI | CCSGG | 3 cut(s) | 200, 386, 387 |
| BcoDI | GTCTC | 1 cut(s) | 55 |
| BfoI | RGCGCY | 2 cut(s) | 167, 269 |
| BfuI | GTATCC | 1 cut(s) | 114 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 297 |
| Bme1390I | CCNGG | 3 cut(s) | 200, 386, 387 |
| Bme18I | GGWCC | 2 cut(s) | 84, 841 |
| BmeT110I | CYCGRG | 2 cut(s) | 385, 596 |
| BmgT120I | GGNCC | 6 cut(s) | 84, 627, 628, 841, 920, 921 |
| BmiI | GGNNCC | 6 cut(s) | 107, 628, 629, 630, 842, 922 |
| BmrFI | CCNGG | 3 cut(s) | 200, 386, 387 |
| BmrI | ACTGGG | 1 cut(s) | 160 |
| BmsI | GCATC | 2 cut(s) | 335, 499 |
| BmuI | ACTGGG | 1 cut(s) | 160 |
| BpiI | GAAGAC | 1 cut(s) | 127 |
| BpmI | CTGGAG | 1 cut(s) | 290 |
| BpuMI | CCSGG | 3 cut(s) | 200, 386, 387 |
| BsaHI | GRCGYC | 1 cut(s) | 422 |
| BsaI | GGTCTC | 1 cut(s) | 55 |
| BsaJI | CCNNGG | 5 cut(s) | 144, 384, 385, 454, 697 |
| BsaWI | WCCGGW | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 145, 150, 256, 291, 386, 623, 636 |
| Bse118I | RCCGGY | 1 cut(s) | 51 |
| Bse1I | ACTGG | 2 cut(s) | 139, 155 |
| BseAI | TCCGGA | 1 cut(s) | 26 |
| BseDI | CCNNGG | 5 cut(s) | 144, 384, 385, 454, 697 |
| BseGI | GGATG | 4 cut(s) | 156, 311, 350, 490 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 145, 150, 256, 291, 386, 623, 636 |
| BseMII | CTCAG | 1 cut(s) | 50 |
| BseNI | ACTGG | 2 cut(s) | 139, 155 |
| BseRI | GAGGAG | 2 cut(s) | 160, 614 |
| BseSI | GKGCMC | 3 cut(s) | 631, 735, 924 |
| BseX3I | CGGCCG | 1 cut(s) | 289 |
| BseXI | GCAGC | 1 cut(s) | 204 |
| Bsh1285I | CGRYCG | 4 cut(s) | 177, 207, 292, 865 |
| BshFI | GGCC | 3 cut(s) | 291, 629, 922 |
| BsiEI | CGRYCG | 4 cut(s) | 177, 207, 292, 865 |
| BsiHKAI | GWGCWC | 1 cut(s) | 234 |
| BsiHKCI | CYCGRG | 2 cut(s) | 385, 596 |
| BsiSI | CCGG | 5 cut(s) | 27, 52, 199, 292, 386 |
| BslFI | GGGAC | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 145, 150, 256, 291, 386, 623, 636 |
| BsmAI | GTCTC | 1 cut(s) | 55 |
| BsmFI | GGGAC | 1 cut(s) | 167 |
| BsmI | GAATGC | 1 cut(s) | 49 |
| BsnI | GGCC | 3 cut(s) | 291, 629, 922 |
| Bso31I | GGTCTC | 1 cut(s) | 55 |
| BsoBI | CYCGRG | 2 cut(s) | 385, 596 |
| Bsp120I | GGGCCC | 2 cut(s) | 627, 920 |
| Bsp1286I | GDGCHC | 5 cut(s) | 234, 631, 660, 735, 924 |
| Bsp13I | TCCGGA | 1 cut(s) | 26 |
| Bsp143I | GATC | 6 cut(s) | 105, 204, 294, 514, 576, 862 |
| Bsp19I | CCATGG | 1 cut(s) | 144 |
| Bsp68I | TCGCGA | 2 cut(s) | 38, 320 |
| BspANI | GGCC | 3 cut(s) | 291, 629, 922 |
| BspCNI | CTCAG | 1 cut(s) | 51 |
| BspEI | TCCGGA | 1 cut(s) | 26 |
| BspLI | GGNNCC | 6 cut(s) | 107, 628, 629, 630, 842, 922 |
| BspPI | GGATC | 3 cut(s) | 100, 113, 302 |
| BspQI | GCTCTTC | 1 cut(s) | 662 |
| BspTNI | GGTCTC | 1 cut(s) | 55 |
| BsrBI | CCGCTC | 4 cut(s) | 82, 118, 604, 729 |
| BsrFI | RCCGGY | 1 cut(s) | 51 |
| BsrI | ACTGG | 2 cut(s) | 139, 155 |
| BssAI | RCCGGY | 1 cut(s) | 51 |
| BssECI | CCNNGG | 5 cut(s) | 144, 384, 385, 454, 697 |
| BssMI | GATC | 6 cut(s) | 105, 204, 294, 514, 576, 862 |
| BssNI | GRCGYC | 1 cut(s) | 422 |
| BssSI | CACGAG | 1 cut(s) | 755 |
| BssT1I | CCWWGG | 1 cut(s) | 144 |
| Bst2BI | CACGAG | 1 cut(s) | 755 |
| Bst4CI | ACNGT | 2 cut(s) | 278, 836 |
| Bst6I | CTCTTC | 1 cut(s) | 662 |
| BstACI | GRCGYC | 1 cut(s) | 422 |
| BstC8I | GCNNGC | 8 cut(s) | 80, 318, 350, 488, 692, 731, 752, 924 |
| BstDEI | CTNAG | 1 cut(s) | 59 |
| BstDSI | CCRYGG | 3 cut(s) | 144, 454, 697 |
| BstEII | GGTNACC | 1 cut(s) | 389 |
| BstF5I | GGATG | 4 cut(s) | 156, 311, 350, 490 |
| BstH2I | RGCGCY | 2 cut(s) | 167, 269 |
| BstHHI | GCGC | 8 cut(s) | 166, 248, 255, 268, 283, 674, 679, 704 |
| BstKTI | GATC | 6 cut(s) | 108, 207, 297, 517, 579, 865 |
| BstMAI | GTCTC | 1 cut(s) | 55 |
| BstMBI | GATC | 6 cut(s) | 105, 204, 294, 514, 576, 862 |
| BstMCI | CGRYCG | 4 cut(s) | 177, 207, 292, 865 |
| BstNSI | RCATGY | 2 cut(s) | 739, 748 |
| BstPI | GGTNACC | 1 cut(s) | 389 |
| BstSCI | CCNGG | 3 cut(s) | 198, 384, 385 |
| BstSLI | GKGCMC | 3 cut(s) | 631, 735, 924 |
| BstV1I | GCAGC | 1 cut(s) | 204 |
| BstV2I | GAAGAC | 1 cut(s) | 127 |
| BstX2I | RGATCY | 1 cut(s) | 105 |
| BstYI | RGATCY | 1 cut(s) | 105 |
| BstZI | CGGCCG | 1 cut(s) | 289 |
| BsuI | GTATCC | 1 cut(s) | 114 |
| BsuRI | GGCC | 3 cut(s) | 291, 629, 922 |
| BtgI | CCRYGG | 3 cut(s) | 144, 454, 697 |
| BtgZI | GCGATG | 1 cut(s) | 53 |
| BtsCI | GGATG | 4 cut(s) | 156, 311, 350, 490 |
| BtuMI | TCGCGA | 2 cut(s) | 38, 320 |
| Cac8I | GCNNGC | 8 cut(s) | 80, 318, 350, 488, 692, 731, 752, 924 |
| CfoI | GCGC | 8 cut(s) | 166, 248, 255, 268, 283, 674, 679, 704 |
| Cfr10I | RCCGGY | 1 cut(s) | 51 |
| Cfr13I | GGNCC | 6 cut(s) | 84, 627, 628, 841, 920, 921 |
| Cfr42I | CCGCGG | 1 cut(s) | 457 |
| Cfr9I | CCCGGG | 1 cut(s) | 385 |
| CpoI | CGGWCCG | 1 cut(s) | 84 |
| CseI | GACGC | 1 cut(s) | 168 |
| Csp6I | GTAC | 2 cut(s) | 241, 469 |
| CspI | CGGWCCG | 1 cut(s) | 84 |
| CviAII | CATG | 6 cut(s) | 145, 256, 328, 643, 736, 745 |
| CviQI | GTAC | 2 cut(s) | 241, 469 |
| DdeI | CTNAG | 1 cut(s) | 59 |
| DpnI | GATC | 6 cut(s) | 107, 206, 296, 516, 578, 864 |
| DpnII | GATC | 6 cut(s) | 105, 204, 294, 514, 576, 862 |
| EaeI | YGGCCR | 1 cut(s) | 289 |
| EagI | CGGCCG | 1 cut(s) | 289 |
| Eam1104I | CTCTTC | 1 cut(s) | 662 |
| EarI | CTCTTC | 1 cut(s) | 662 |
| EciI | GGCGGA | 2 cut(s) | 318, 357 |
| Ecl136II | GAGCTC | 1 cut(s) | 232 |
| EclXI | CGGCCG | 1 cut(s) | 289 |
| Eco130I | CCWWGG | 1 cut(s) | 144 |
| Eco24I | GRGCYC | 4 cut(s) | 234, 631, 660, 924 |
| Eco31I | GGTCTC | 1 cut(s) | 55 |
| Eco47I | GGWCC | 2 cut(s) | 84, 841 |
| Eco47III | AGCGCT | 1 cut(s) | 165 |
| Eco52I | CGGCCG | 1 cut(s) | 289 |
| Eco53kI | GAGCTC | 1 cut(s) | 232 |
| Eco88I | CYCGRG | 2 cut(s) | 385, 596 |
| Eco91I | GGTNACC | 1 cut(s) | 389 |
| EcoICRI | GAGCTC | 1 cut(s) | 232 |
| EcoO109I | RGGNCCY | 2 cut(s) | 627, 628 |
| EcoO65I | GGTNACC | 1 cut(s) | 389 |
| EcoT14I | CCWWGG | 1 cut(s) | 144 |
| EcoT38I | GRGCYC | 4 cut(s) | 234, 631, 660, 924 |
| ErhI | CCWWGG | 1 cut(s) | 144 |
| FaeI | CATG | 6 cut(s) | 148, 259, 331, 646, 739, 748 |
| FaiI | YATR | 6 cut(s) | 146, 257, 329, 644, 737, 746 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 601, 633 |
| FaqI | GGGAC | 1 cut(s) | 167 |
| FatI | CATG | 6 cut(s) | 144, 255, 327, 642, 735, 744 |
| FauI | CCCGC | 8 cut(s) | 78, 219, 258, 579, 597, 646, 722, 931 |
| FokI | GGATG | 4 cut(s) | 143, 318, 357, 477 |
| FriOI | GRGCYC | 4 cut(s) | 234, 631, 660, 924 |
| GlaI | GCGC | 8 cut(s) | 165, 247, 254, 267, 282, 673, 678, 703 |
| GsuI | CTGGAG | 1 cut(s) | 290 |
| HaeII | RGCGCY | 2 cut(s) | 167, 269 |
| HaeIII | GGCC | 3 cut(s) | 291, 629, 922 |
| HapII | CCGG | 5 cut(s) | 27, 52, 199, 292, 386 |
| HgaI | GACGC | 1 cut(s) | 168 |
| HhaI | GCGC | 8 cut(s) | 166, 248, 255, 268, 283, 674, 679, 704 |
| Hin1I | GRCGYC | 1 cut(s) | 422 |
| Hin1II | CATG | 6 cut(s) | 148, 259, 331, 646, 739, 748 |
| Hin6I | GCGC | 8 cut(s) | 164, 246, 253, 266, 281, 672, 677, 702 |
| HinP1I | GCGC | 8 cut(s) | 164, 246, 253, 266, 281, 672, 677, 702 |
| HincII | GTYRAC | 1 cut(s) | 377 |
| HindII | GTYRAC | 1 cut(s) | 377 |
| HinfI | GANTC | 7 cut(s) | 89, 187, 355, 373, 411, 809, 849 |
| HpaII | CCGG | 5 cut(s) | 27, 52, 199, 292, 386 |
| HphI | GGTGA | 5 cut(s) | 196, 382, 383, 601, 833 |
| Hpy166II | GTNNAC | 2 cut(s) | 377, 916 |
| Hpy188I | TCNGA | 9 cut(s) | 88, 94, 360, 495, 581, 666, 769, 814, 867 |
| Hpy188III | TCNNGA | 7 cut(s) | 27, 37, 109, 208, 319, 408, 442 |
| Hpy8I | GTNNAC | 2 cut(s) | 377, 916 |
| Hpy99I | CGWCG | 3 cut(s) | 184, 427, 863 |
| HpyAV | CCTTC | 1 cut(s) | 499 |
| HpyCH4III | ACNGT | 2 cut(s) | 278, 836 |
| HpyCH4IV | ACGT | 2 cut(s) | 422, 471 |
| HpyCH4V | TGCA | 2 cut(s) | 237, 739 |
| HpyF3I | CTNAG | 1 cut(s) | 59 |
| HpySE526I | ACGT | 2 cut(s) | 422, 471 |
| Hsp92I | GRCGYC | 1 cut(s) | 422 |
| Hsp92II | CATG | 6 cut(s) | 148, 259, 331, 646, 739, 748 |
| HspAI | GCGC | 8 cut(s) | 164, 246, 253, 266, 281, 672, 677, 702 |
| Kpn2I | TCCGGA | 1 cut(s) | 26 |
| KspI | CCGCGG | 1 cut(s) | 457 |
| Kzo9I | GATC | 6 cut(s) | 105, 204, 294, 514, 576, 862 |
| LguI | GCTCTTC | 1 cut(s) | 662 |
| LmnI | GCTCC | 4 cut(s) | 201, 229, 601, 639 |
| Lsp1109I | GCAGC | 1 cut(s) | 204 |
| LweI | GCATC | 2 cut(s) | 335, 499 |
| MaeII | ACGT | 2 cut(s) | 422, 471 |
| MaeIII | GTNAC | 2 cut(s) | 389, 405 |
| MalI | GATC | 6 cut(s) | 107, 206, 296, 516, 578, 864 |
| MbiI | CCGCTC | 4 cut(s) | 82, 118, 604, 729 |
| MboI | GATC | 6 cut(s) | 105, 204, 294, 514, 576, 862 |
| MboII | GAAGA | 4 cut(s) | 127, 325, 457, 679 |
| MflI | RGATCY | 1 cut(s) | 105 |
| MhlI | GDGCHC | 5 cut(s) | 234, 631, 660, 735, 924 |
| MluCI | AATT | 3 cut(s) | 18, 30, 361 |
| MlyI | GAGTC | 3 cut(s) | 83, 349, 382 |
| MmeI | TCCRAC | 3 cut(s) | 111, 687, 747 |
| MnlI | CCTC | 8 cut(s) | 181, 404, 449, 502, 524, 558, 592, 895 |
| MroI | TCCGGA | 1 cut(s) | 26 |
| MseI | TTAA | 1 cut(s) | 540 |
| MspA1I | CMGCKG | 2 cut(s) | 456, 763 |
| MspI | CCGG | 5 cut(s) | 27, 52, 199, 292, 386 |
| MspR9I | CCNGG | 3 cut(s) | 200, 386, 387 |
| MteI | GCGCNGCGC | 1 cut(s) | 675 |
| Mva1269I | GAATGC | 1 cut(s) | 49 |
| NciI | CCSGG | 3 cut(s) | 200, 386, 387 |
| NcoI | CCATGG | 1 cut(s) | 144 |
| NdeII | GATC | 6 cut(s) | 105, 204, 294, 514, 576, 862 |
| NlaIII | CATG | 6 cut(s) | 148, 259, 331, 646, 739, 748 |
| NlaIV | GGNNCC | 6 cut(s) | 107, 628, 629, 630, 842, 922 |
| NmeAIII | GCCGAG | 2 cut(s) | 99, 666 |
| NmuCI | GTSAC | 2 cut(s) | 389, 405 |
| NruI | TCGCGA | 2 cut(s) | 38, 320 |
| NspI | RCATGY | 2 cut(s) | 739, 748 |
| PaeR7I | CTCGAG | 1 cut(s) | 596 |
| PciSI | GCTCTTC | 1 cut(s) | 662 |
| PctI | GAATGC | 1 cut(s) | 49 |
| PfeI | GAWTC | 4 cut(s) | 187, 411, 809, 849 |
| PflFI | GACNNNGTC | 1 cut(s) | 178 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 145, 150 |
| Ple19I | CGATCG | 2 cut(s) | 207, 865 |
| PleI | GAGTC | 3 cut(s) | 83, 349, 381 |
| PpsI | GAGTC | 3 cut(s) | 83, 349, 381 |
| Psp124BI | GAGCTC | 1 cut(s) | 234 |
| PspEI | GGTNACC | 1 cut(s) | 389 |
| PspN4I | GGNNCC | 6 cut(s) | 107, 628, 629, 630, 842, 922 |
| PspOMI | GGGCCC | 2 cut(s) | 627, 920 |
| PspPI | GGNCC | 6 cut(s) | 84, 627, 628, 841, 920, 921 |
| PspXI | VCTCGAGB | 1 cut(s) | 596 |
| PsuI | RGATCY | 1 cut(s) | 105 |
| PsyI | GACNNNGTC | 1 cut(s) | 178 |
| PvuI | CGATCG | 2 cut(s) | 207, 865 |
| RruI | TCGCGA | 2 cut(s) | 38, 320 |
| RsaI | GTAC | 2 cut(s) | 242, 470 |
| RsaNI | GTAC | 2 cut(s) | 241, 469 |
| Rsr2I | CGGWCCG | 1 cut(s) | 84 |
| RsrII | CGGWCCG | 1 cut(s) | 84 |
| SacI | GAGCTC | 1 cut(s) | 234 |
| SacII | CCGCGG | 1 cut(s) | 457 |
| SapI | GCTCTTC | 1 cut(s) | 662 |
| SaqAI | TTAA | 1 cut(s) | 540 |
| Sau3AI | GATC | 6 cut(s) | 105, 204, 294, 514, 576, 862 |
| Sau96I | GGNCC | 6 cut(s) | 84, 627, 628, 841, 920, 921 |
| SchI | GAGTC | 3 cut(s) | 83, 349, 382 |
| ScrFI | CCNGG | 3 cut(s) | 200, 386, 387 |
| SduI | GDGCHC | 5 cut(s) | 234, 631, 660, 735, 924 |
| SfaNI | GCATC | 2 cut(s) | 335, 499 |
| Sfr274I | CTCGAG | 1 cut(s) | 596 |
| Sfr303I | CCGCGG | 1 cut(s) | 457 |
| SgrBI | CCGCGG | 1 cut(s) | 457 |
| SinI | GGWCC | 2 cut(s) | 84, 841 |
| SlaI | CTCGAG | 1 cut(s) | 596 |
| SmaI | CCCGGG | 1 cut(s) | 387 |
| SmlI | CTYRAG | 1 cut(s) | 596 |
| SmoI | CTYRAG | 1 cut(s) | 596 |
| Sse9I | AATT | 3 cut(s) | 18, 30, 361 |
| SstI | GAGCTC | 1 cut(s) | 234 |
| StyD4I | CCNGG | 3 cut(s) | 198, 384, 385 |
| StyI | CCWWGG | 1 cut(s) | 144 |
| TaaI | ACNGT | 2 cut(s) | 278, 836 |
| TaiI | ACGT | 2 cut(s) | 425, 474 |
| TaqI | TCGA | 4 cut(s) | 15, 173, 597, 893 |
| TaqII | GACCGA | 2 cut(s) | 79, 803 |
| TasI | AATT | 3 cut(s) | 18, 30, 361 |
| TfiI | GAWTC | 4 cut(s) | 187, 411, 809, 849 |
| Tru1I | TTAA | 1 cut(s) | 540 |
| Tru9I | TTAA | 1 cut(s) | 540 |
| TseFI | GTSAC | 2 cut(s) | 389, 405 |
| TseI | GCWGC | 1 cut(s) | 217 |
| Tsp45I | GTSAC | 2 cut(s) | 389, 405 |
| TspDTI | ATGAA | 1 cut(s) | 56 |
| TspMI | CCCGGG | 1 cut(s) | 385 |
| Tth111I | GACNNNGTC | 1 cut(s) | 178 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 145, 150 |
| VpaK11BI | GGWCC | 2 cut(s) | 84, 841 |
| XapI | RAATTY | 3 cut(s) | 18, 30, 361 |
| XceI | RCATGY | 2 cut(s) | 739, 748 |
| XhoI | CTCGAG | 1 cut(s) | 596 |
| XmaI | CCCGGG | 1 cut(s) | 385 |
| ZraI | GACGTC | 1 cut(s) | 423 |