Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005712

Physical Location & Seq

Genomic Coordinates Reverse (-)

22347668 .. 22351138

Gene Structure 3471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGGGGCCGTCACCATTGGTGAACTGAAGCCTAGCATTTCCGGGAAGCGGTCGTTTCGTCCGAGTTCTAGCATAAGGCATGCCACTGAATGTTCCTGCAGGGTTTTTGATATGTTGGTACCTATGAGAATGCCTATATCTGATGTTTCTAGCGATCTTACTGTGGAAATAGGAGCATCAAGCTTTGCACTTCACAAGTTCCCCCTAGTCTCCAAGAGTGGAAGGATTCGGAAATTGTTGCTTGAAGCAAAAGATGCAAAAGTTTCGCGCATAATTCTCAATTCTGTTCCGGGTGGATCAGAGGGATTTGAGCTAGCTGCAAAGTTCTGTTACGGAGTTCATGTTGAAATTACAGAGTCAAATGTTGCCATGCTTCGTTGCGTAGCGCACTTCCTGGAAATGACGGAAGAGTATGCTGAGAAAAATATGGAAACGAGAACCGAAGCTTGTCTGAAGGAGACGGTGCTTCCAAACATATCAAAGTCGATATCAGTTCTTCATCGCTGTGAAACCCTCTTGCCTGCAGCAGAAGAAACCAACCTTGTAAGCAGGCTCATCAACGCAATTGCAAACAATGCATGCAAAGAGCAGCTCACCTCTGGCTTATTGAAACTTGACCACAACTTCACTGCAAAAGGAGCTCCAAATATGGAACCTGAAACGCCCGCAGACTGGTGGGGAAAAGCGCTCACAGTTCTTAGCCTCGACTTCTTCCAACGCGTTCTATCCGGGGTGAAAACCAAGGGTCTTAAACAGGATATGATCAGCAAAATTTTAATTAACTATGCTCATAATTCTCTTCAAGTACTTGTCGTCCGAGATAACCAATTGGTGAAAGGAAGCCTCTTGGATTTAGAATTGCAAAAGAAACAAAGGATCATTGTTGAAGCTATAGTTAGTTTGCTTCCAACACAATCAAGGAAGAGTCCAGTTCCAATGGCGTTTCTTTCGAGCTTGTTGAAAACTGCGATTGCAGCATCGGCGTCTACTTCTTGCAGATCCGATTTAGAAAGGCGGATTGGTCTGCAGCTGGATCAGGCAATTCTCGAAGACATCCTGATTCCGGCAAATTCACATGGAAACAACCACAGCACAATCTATGATACAGATGCTGTATTGAGGATCTTTTCGATATTTTTGAACTTGGATGAAGATGATGATGATGAAGATAATCACTTGAGGGACGAAAGCGAAATGGTTTATGATTTCGACAGCCCTGGATCTCCTAAACAAAGTTCAATCCTGAAGGTATCAAAGTTGCTAGACAATTATCTTGCAGAAGTAGCACTCGACTCAAACTTGATGCCGTCAAAGTTCATAGCACTAGCAGAGCTACTTCCGGACCATGCTCGAATATTAAGTGATGGACTCTACCGAGCTGTGGATATCTTCCTCAAAGTGCATCCTAACCTCAAGGACTCTGAACGCTACCGCCTCTGCAAAACCATCGACTGCCAGAAACTATCCCAAGAAGCCTGCAGTCACGCAGCGCAGAACGAAAGGCTACCAGTACAGATGGCAGTTCAAGTGCTCTACTTTGAGCAAATCAGGCTCAGAAATGCAATGAACGGTGGCCACAACCAGTTCTTCTTCGGGGCAATAAACGGTACACAATTCCCTCAGCGATCAGGCAGTGGTGCAGGCAGTGGAGCCATTTCGCCAAGGGACAACTACGCGTCAGTCAGAAGAGAGAACCGAGAGCTGAAGCTTGAAGTTGCGAGAATGCGAATGAGGCTGACAGACTTGGAAAAAGATCATGTTTCTATGAAACAAGAGCTTGTGAAGTCACATCCTGCAAACAAGCTGTTCAAATCATTCACCAAAAAGTTGGGGAAGCTCAATGCATTGTTCAAGATCAATAGTATCAAGCCTTTAGGGGGGAAGGCGCATTCGGAGTCCAGATTTCCGTTCCAGAAGCGAAGGCGCCATTCGGTTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

647

Amino Acids

72.02

Weight (kDa)

8.91

Isoelectric Point (pI)

45.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	224 - 493	7.5e-89	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03010 AT1G03010 AT1G03010
fragaria_vesca	FvH4_2g24980 FvH4_2g24980
malus_domestica	MD03G1278600.v1.1 MD03G1278700.v1.1 MD11G1301000.v1.1
prunus_persica	Prupe.8G254800_v2.0.a1 Prupe.8G254800_v2.0.a1 Prupe.8G254800_v2.0.a1
pyrus_communis	pycom03g22180 pycom11g26390
rosa_chinensis	RchiOBHm_Chr6g0292951
rosa_laevigata	RLG00000011979
rosa_roxburghii	Rroxscaffold_7G00174540
rosa_rugosa	Rorug06G0231100 Rorug06G0231200 Rorug06G0231300 Rorug06G0231400 Rorug06G0231400 Rorug06G0231400 Rorug06G0231500
rosa_samantha	Rh6AG344100 Rh6BG351500 Rh6CG358600 Rh6DG344300
rosa_wichuraiana	Rw6G030040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	118
AccB1I	GGYRCC	2 cut(s)	118, 1923
AccI	GTMKAC	1 cut(s)	986
AccII	CGCG	3 cut(s)	268, 720, 1676
AccIII	TCCGGA	1 cut(s)	1339
AciI	CCGC	4 cut(s)	49, 666, 1015, 1432
AclWI	GGATC	6 cut(s)	304, 884, 993, 1041, 1130, 1228
AcoI	YGGCCR	1 cut(s)	1573
AcsI	RAATTY	2 cut(s)	771, 1069
AcuI	CTGAAG	4 cut(s)	47, 473, 1265, 1724
AcyI	GRCGYC	2 cut(s)	983, 1924
AfaI	GTAC	4 cut(s)	120, 807, 1512, 1609
AfeI	AGCGCT	1 cut(s)	687
AfiI	CCNNNNNNNGG	5 cut(s)	48, 672, 1063, 1381, 1877
AflIII	ACRYGT	2 cut(s)	718, 1674
AjnI	CCWGG	2 cut(s)	393, 1216
AjuI	GAANNNNNNNTTGG	2 cut(s)	1002, 1034
Alw21I	GWGCWC	2 cut(s)	643, 1533
Alw26I	GTCTC	2 cut(s)	214, 452
AlwI	GGATC	6 cut(s)	304, 884, 993, 1041, 1130, 1228
AlwNI	CAGNNNCTG	1 cut(s)	1112
Aor13HI	TCCGGA	1 cut(s)	1339
Aor51HI	AGCGCT	1 cut(s)	687
AoxI	GGCC	2 cut(s)	6, 1573
ApeKI	GCWGC	6 cut(s)	317, 524, 589, 974, 1027, 1487
ApoI	RAATTY	2 cut(s)	771, 1069
Asp718I	GGTACC	1 cut(s)	118
AspLEI	GCGC	6 cut(s)	270, 388, 688, 1492, 1888, 1926
AspS9I	GGNCC	2 cut(s)	6, 1342
AsuC2I	CCSGG	3 cut(s)	43, 291, 730
AsuHPI	GGTGA	6 cut(s)	4, 32, 586, 745, 844, 1810
AsuNHI	GCTAGC	1 cut(s)	313
AvaII	GGWCC	1 cut(s)	1342
BalI	TGGCCA	1 cut(s)	1575
BanI	GGYRCC	2 cut(s)	118, 1923
BanII	GRGCYC	1 cut(s)	643
BbsI	GAAGAC	1 cut(s)	1056
Bbv12I	GWGCWC	2 cut(s)	643, 1533
BbvCI	CCTCAGC	1 cut(s)	1620
BbvI	GCAGC	6 cut(s)	304, 536, 601, 986, 1039, 1499
BccI	CCATC	3 cut(s)	1358, 1454, 1510
BceAI	ACGGC	1 cut(s)	1291
BcgI	CGANNNNNNTGC	4 cut(s)	246, 280, 1429, 1463
BciT130I	CCWGG	2 cut(s)	395, 1218
BclI	TGATCA	1 cut(s)	762
BcnI	CCSGG	3 cut(s)	43, 291, 730
BcoDI	GTCTC	2 cut(s)	214, 452
BfaI	CTAG	7 cut(s)	33, 69, 150, 206, 314, 1262, 1325
BfmI	CTRYAG	5 cut(s)	97, 522, 891, 1025, 1477
BfoI	RGCGCY	2 cut(s)	689, 1927
BisI	GCNGC	6 cut(s)	318, 525, 590, 975, 1028, 1488
BlsI	GCNGC	6 cut(s)	319, 526, 591, 976, 1029, 1489
BmcAI	AGTACT	1 cut(s)	807
Bme1390I	CCNGG	5 cut(s)	43, 291, 395, 730, 1218
Bme18I	GGWCC	1 cut(s)	1342
BmgT120I	GGNCC	2 cut(s)	6, 1342
BmiI	GGNNCC	5 cut(s)	7, 120, 654, 1651, 1925
BmrFI	CCNGG	5 cut(s)	43, 291, 395, 730, 1218
BmsI	GCATC	6 cut(s)	185, 244, 986, 1099, 1293, 1411
BmtI	GCTAGC	1 cut(s)	317
BpiI	GAAGAC	1 cut(s)	1056
Bpu10I	CCTNAGC	1 cut(s)	1620
BpuEI	CTTGAG	2 cut(s)	1198, 1397
BpuMI	CCSGG	3 cut(s)	43, 291, 730
BsaHI	GRCGYC	2 cut(s)	983, 1924
BsaJI	CCNNGG	4 cut(s)	729, 741, 1216, 1661
BsaWI	WCCGGW	1 cut(s)	1339
BsaXI	ACNNNNNCTCC	2 cut(s)	327, 357
Bsc4I	CCNNNNNNNGG	5 cut(s)	48, 672, 1063, 1381, 1877
Bse1I	ACTGG	4 cut(s)	677, 929, 1508, 1582
Bse3DI	GCAATG	1 cut(s)	1569
BseAI	TCCGGA	1 cut(s)	1339
BseBI	CCWGG	2 cut(s)	395, 1218
BseDI	CCNNGG	4 cut(s)	729, 741, 1216, 1661
BseGI	GGATG	4 cut(s)	1053, 1153, 1402, 1789
BseLI	CCNNNNNNNGG	5 cut(s)	48, 672, 1063, 1381, 1877
BseMI	GCAATG	1 cut(s)	1569
BseMII	CTCAG	3 cut(s)	408, 1567, 1634
BseNI	ACTGG	4 cut(s)	677, 929, 1508, 1582
BseXI	GCAGC	6 cut(s)	304, 536, 601, 986, 1039, 1499
BsgI	GTGCAG	1 cut(s)	1659
Bsh1236I	CGCG	3 cut(s)	268, 720, 1676
Bsh1285I	CGRYCG	1 cut(s)	53
BshFI	GGCC	2 cut(s)	8, 1575
BshNI	GGYRCC	2 cut(s)	118, 1923
BsiEI	CGRYCG	1 cut(s)	53
BsiHKAI	GWGCWC	2 cut(s)	643, 1533
BsiSI	CCGG	5 cut(s)	42, 290, 729, 1064, 1340
BslFI	GGGAC	2 cut(s)	1196, 1679
BslI	CCNNNNNNNGG	5 cut(s)	48, 672, 1063, 1381, 1877
BsmAI	GTCTC	2 cut(s)	214, 452
BsmBI	CGTCTC	1 cut(s)	452
BsmFI	GGGAC	2 cut(s)	1196, 1679
BsmI	GAATGC	3 cut(s)	135, 1728, 1888
BsnI	GGCC	2 cut(s)	8, 1575
Bsp1286I	GDGCHC	2 cut(s)	643, 1533
Bsp13I	TCCGGA	1 cut(s)	1339
BspACI	CCGC	4 cut(s)	49, 666, 1015, 1432
BspANI	GGCC	2 cut(s)	8, 1575
BspCNI	CTCAG	3 cut(s)	409, 1566, 1633
BspEI	TCCGGA	1 cut(s)	1339
BspFNI	CGCG	3 cut(s)	268, 720, 1676
BspHI	TCATGA	1 cut(s)	1937
BspLI	GGNNCC	5 cut(s)	7, 120, 654, 1651, 1925
BspMAI	CTGCAG	4 cut(s)	101, 526, 1029, 1481
BspOI	GCTAGC	1 cut(s)	317
BspPI	GGATC	6 cut(s)	304, 884, 993, 1041, 1130, 1228
BspT107I	GGYRCC	2 cut(s)	118, 1923
BsrDI	GCAATG	1 cut(s)	1569
BsrI	ACTGG	4 cut(s)	677, 929, 1508, 1582
BssECI	CCNNGG	4 cut(s)	729, 741, 1216, 1661
BssNI	GRCGYC	2 cut(s)	983, 1924
BssT1I	CCWWGG	2 cut(s)	741, 1661
Bst2UI	CCWGG	2 cut(s)	395, 1218
Bst4CI	ACNGT	5 cut(s)	163, 463, 694, 1571, 1607
Bst6I	CTCTTC	4 cut(s)	402, 804, 917, 1681
BstACI	GRCGYC	2 cut(s)	983, 1924
BstAPI	GCANNNNNTGC	2 cut(s)	254, 575
BstC8I	GCNNGC	8 cut(s)	81, 315, 522, 551, 580, 666, 1477, 1642
BstDEI	CTNAG	4 cut(s)	417, 698, 1553, 1620
BstF5I	GGATG	4 cut(s)	1053, 1153, 1402, 1789
BstFNI	CGCG	3 cut(s)	268, 720, 1676
BstH2I	RGCGCY	2 cut(s)	689, 1927
BstHHI	GCGC	6 cut(s)	270, 388, 688, 1492, 1888, 1926
BstMAI	GTCTC	2 cut(s)	214, 452
BstMCI	CGRYCG	1 cut(s)	53
BstMWI	GCNNNNNNNGC	8 cut(s)	254, 575, 638, 974, 980, 1283, 1549, 1732
BstNI	CCWGG	2 cut(s)	395, 1218
BstNSI	RCATGY	2 cut(s)	83, 582
BstSCI	CCNGG	5 cut(s)	41, 289, 393, 728, 1216
BstSFI	CTRYAG	5 cut(s)	97, 522, 891, 1025, 1477
BstUI	CGCG	3 cut(s)	268, 720, 1676
BstV1I	GCAGC	6 cut(s)	304, 536, 601, 986, 1039, 1499
BstV2I	GAAGAC	1 cut(s)	1056
BstX2I	RGATCY	3 cut(s)	998, 1122, 1220
BstXI	CCANNNNNNTGG	1 cut(s)	1828
BstYI	RGATCY	3 cut(s)	998, 1122, 1220
BsuRI	GGCC	2 cut(s)	8, 1575
BtgZI	GCGATG	1 cut(s)	485
BtsCI	GGATG	4 cut(s)	1053, 1153, 1402, 1789
BtsI	GCAGTG	3 cut(s)	627, 1639, 1651
BtsIMutI	CAGTG	4 cut(s)	84, 627, 1639, 1651
Cac8I	GCNNGC	8 cut(s)	81, 315, 522, 551, 580, 666, 1477, 1642
CaiI	CAGNNNCTG	1 cut(s)	1112
CciI	TCATGA	1 cut(s)	1937
CfoI	GCGC	6 cut(s)	270, 388, 688, 1492, 1888, 1926
Cfr13I	GGNCC	2 cut(s)	6, 1342
CseI	GACGC	2 cut(s)	972, 1665
Csp6I	GTAC	4 cut(s)	119, 806, 1511, 1608
CviAII	CATG	8 cut(s)	80, 341, 370, 579, 1076, 1346, 1757, 1938
CviQI	GTAC	4 cut(s)	119, 806, 1511, 1608
DdeI	CTNAG	4 cut(s)	417, 698, 1553, 1620
DinI	GGCGCC	1 cut(s)	1925
EaeI	YGGCCR	1 cut(s)	1573
Eam1104I	CTCTTC	4 cut(s)	402, 804, 917, 1681
EarI	CTCTTC	4 cut(s)	402, 804, 917, 1681
EciI	GGCGGA	1 cut(s)	1030
Ecl136II	GAGCTC	1 cut(s)	641
Eco130I	CCWWGG	2 cut(s)	741, 1661
Eco24I	GRGCYC	1 cut(s)	643
Eco32I	GATATC	2 cut(s)	489, 1387
Eco47I	GGWCC	1 cut(s)	1342
Eco47III	AGCGCT	1 cut(s)	687
Eco53kI	GAGCTC	1 cut(s)	641
Eco57I	CTGAAG	4 cut(s)	47, 473, 1265, 1724
EcoICRI	GAGCTC	1 cut(s)	641
EcoRII	CCWGG	2 cut(s)	393, 1216
EcoRV	GATATC	2 cut(s)	489, 1387
EcoT14I	CCWWGG	2 cut(s)	741, 1661
EcoT22I	ATGCAT	2 cut(s)	580, 1846
EcoT38I	GRGCYC	1 cut(s)	643
EgeI	GGCGCC	1 cut(s)	1925
EheI	GGCGCC	1 cut(s)	1925
ErhI	CCWWGG	2 cut(s)	741, 1661
Esp3I	CGTCTC	1 cut(s)	452
FaeI	CATG	8 cut(s)	83, 344, 373, 582, 1079, 1349, 1760, 1941
FaqI	GGGAC	2 cut(s)	1196, 1679
FatI	CATG	8 cut(s)	79, 340, 369, 578, 1075, 1345, 1756, 1937
FauI	CCCGC	1 cut(s)	673
FbaI	TGATCA	1 cut(s)	762
FblI	GTMKAC	1 cut(s)	986
Fnu4HI	GCNGC	6 cut(s)	318, 525, 590, 975, 1028, 1488
FokI	GGATG	4 cut(s)	1040, 1160, 1389, 1776
FriOI	GRGCYC	1 cut(s)	643
Fsp4HI	GCNGC	6 cut(s)	318, 525, 590, 975, 1028, 1488
FspBI	CTAG	7 cut(s)	33, 69, 150, 206, 314, 1262, 1325
GlaI	GCGC	6 cut(s)	269, 387, 687, 1491, 1887, 1925
GluI	GCNGC	6 cut(s)	318, 525, 590, 975, 1028, 1488
HaeII	RGCGCY	2 cut(s)	689, 1927
HaeIII	GGCC	2 cut(s)	8, 1575
HapII	CCGG	5 cut(s)	42, 290, 729, 1064, 1340
HgaI	GACGC	2 cut(s)	972, 1665
HhaI	GCGC	6 cut(s)	270, 388, 688, 1492, 1888, 1926
Hin1I	GRCGYC	2 cut(s)	983, 1924
Hin1II	CATG	8 cut(s)	83, 344, 373, 582, 1079, 1349, 1760, 1941
Hin6I	GCGC	6 cut(s)	268, 386, 686, 1490, 1886, 1924
HinP1I	GCGC	6 cut(s)	268, 386, 686, 1490, 1886, 1924
HindIII	AAGCTT	3 cut(s)	181, 444, 1706
HinfI	GANTC	8 cut(s)	226, 356, 925, 1060, 1292, 1368, 1418, 1895
HpaII	CCGG	5 cut(s)	42, 290, 729, 1064, 1340
HphI	GGTGA	6 cut(s)	4, 32, 586, 745, 844, 1810
Hpy166II	GTNNAC	3 cut(s)	23, 987, 1610
Hpy188III	TCNNGA	8 cut(s)	1046, 1057, 1243, 1340, 1852, 1899, 1912, 1938
Hpy8I	GTNNAC	3 cut(s)	23, 987, 1610
HpyAV	CCTTC	5 cut(s)	216, 448, 1240, 1876, 1914
HpyCH4III	ACNGT	5 cut(s)	163, 463, 694, 1571, 1607
HpyF10VI	GCNNNNNNNGC	8 cut(s)	254, 575, 638, 974, 980, 1283, 1549, 1732
HpyF3I	CTNAG	4 cut(s)	417, 698, 1553, 1620
Hsp92I	GRCGYC	2 cut(s)	983, 1924
Hsp92II	CATG	8 cut(s)	83, 344, 373, 582, 1079, 1349, 1760, 1941
HspAI	GCGC	6 cut(s)	268, 386, 686, 1490, 1886, 1924
KasI	GGCGCC	1 cut(s)	1923
Kpn2I	TCCGGA	1 cut(s)	1339
KpnI	GGTACC	1 cut(s)	122
Ksp22I	TGATCA	1 cut(s)	762
LmnI	GCTCC	4 cut(s)	173, 638, 646, 1649
Lsp1109I	GCAGC	6 cut(s)	304, 536, 601, 986, 1039, 1499
LweI	GCATC	6 cut(s)	185, 244, 986, 1099, 1293, 1411
MaeI	CTAG	7 cut(s)	33, 69, 150, 206, 314, 1262, 1325
MaeIII	GTNAC	4 cut(s)	10, 329, 1481, 1785
MfeI	CAATTG	2 cut(s)	564, 827
MflI	RGATCY	3 cut(s)	998, 1122, 1220
MhlI	GDGCHC	2 cut(s)	643, 1533
MlsI	TGGCCA	1 cut(s)	1575
MluI	ACGCGT	2 cut(s)	718, 1674
MluNI	TGGCCA	1 cut(s)	1575
Mly113I	GGCGCC	1 cut(s)	1924
MlyI	GAGTC	6 cut(s)	365, 934, 1286, 1362, 1412, 1904
MmeI	TCCRAC	2 cut(s)	739, 932
Mox20I	TGGCCA	1 cut(s)	1575
Mph1103I	ATGCAT	2 cut(s)	580, 1846
MroI	TCCGGA	1 cut(s)	1339
MscI	TGGCCA	1 cut(s)	1575
MseI	TTAA	4 cut(s)	750, 776, 780, 1358
MslI	CAYNNNNRTG	1 cut(s)	504
Msp20I	TGGCCA	1 cut(s)	1575
MspA1I	CMGCKG	1 cut(s)	1030
MspI	CCGG	5 cut(s)	42, 290, 729, 1064, 1340
MspR9I	CCNGG	5 cut(s)	43, 291, 395, 730, 1218
MunI	CAATTG	2 cut(s)	564, 827
Mva1269I	GAATGC	3 cut(s)	135, 1728, 1888
MvaI	CCWGG	2 cut(s)	395, 1218
MvnI	CGCG	3 cut(s)	268, 720, 1676
MwoI	GCNNNNNNNGC	8 cut(s)	254, 575, 638, 974, 980, 1283, 1549, 1732
NarI	GGCGCC	1 cut(s)	1924
NciI	CCSGG	3 cut(s)	43, 291, 730
NheI	GCTAGC	1 cut(s)	313
NlaIII	CATG	8 cut(s)	83, 344, 373, 582, 1079, 1349, 1760, 1941
NlaIV	GGNNCC	5 cut(s)	7, 120, 654, 1651, 1925
NmuCI	GTSAC	3 cut(s)	10, 1481, 1785
NsiI	ATGCAT	2 cut(s)	580, 1846
NspI	RCATGY	2 cut(s)	83, 582
PacI	TTAATTAA	1 cut(s)	780
PaeI	GCATGC	2 cut(s)	83, 582
PagI	TCATGA	1 cut(s)	1937
PcsI	WCGNNNNNNNCGW	1 cut(s)	59
PctI	GAATGC	3 cut(s)	135, 1728, 1888
PfeI	GAWTC	2 cut(s)	226, 1060
PfoI	TCCNGGA	2 cut(s)	41, 393
PkrI	GCNGC	6 cut(s)	319, 526, 591, 976, 1029, 1489
PleI	GAGTC	6 cut(s)	364, 933, 1286, 1362, 1412, 1903
PluTI	GGCGCC	1 cut(s)	1927
PpsI	GAGTC	6 cut(s)	364, 933, 1286, 1362, 1412, 1903
Psp124BI	GAGCTC	1 cut(s)	643
Psp6I	CCWGG	2 cut(s)	393, 1216
PspGI	CCWGG	2 cut(s)	393, 1216
PspN4I	GGNNCC	5 cut(s)	7, 120, 654, 1651, 1925
PspPI	GGNCC	2 cut(s)	6, 1342
PstI	CTGCAG	4 cut(s)	101, 526, 1029, 1481
PstNI	CAGNNNCTG	1 cut(s)	1112
PsuI	RGATCY	3 cut(s)	998, 1122, 1220
PvuII	CAGCTG	1 cut(s)	1030
RsaI	GTAC	4 cut(s)	120, 807, 1512, 1609
RsaNI	GTAC	4 cut(s)	119, 806, 1511, 1608
RseI	CAYNNNNRTG	1 cut(s)	504
SacI	GAGCTC	1 cut(s)	643
SaqAI	TTAA	4 cut(s)	750, 776, 780, 1358
SatI	GCNGC	6 cut(s)	318, 525, 590, 975, 1028, 1488
Sau96I	GGNCC	2 cut(s)	6, 1342
SbfI	CCTGCAGG	1 cut(s)	101
ScaI	AGTACT	1 cut(s)	807
SchI	GAGTC	6 cut(s)	365, 934, 1286, 1362, 1412, 1904
ScrFI	CCNGG	5 cut(s)	43, 291, 395, 730, 1218
SdaI	CCTGCAGG	1 cut(s)	101
SduI	GDGCHC	2 cut(s)	643, 1533
SfaNI	GCATC	6 cut(s)	185, 244, 986, 1099, 1293, 1411
SfcI	CTRYAG	5 cut(s)	97, 522, 891, 1025, 1477
SfoI	GGCGCC	1 cut(s)	1925
SinI	GGWCC	1 cut(s)	1342
SmiMI	CAYNNNNRTG	1 cut(s)	504
SmlI	CTYRAG	2 cut(s)	1177, 1412
SmoI	CTYRAG	2 cut(s)	1177, 1412
SphI	GCATGC	2 cut(s)	83, 582
Sse8387I	CCTGCAGG	1 cut(s)	101
SsiI	CCGC	4 cut(s)	49, 666, 1015, 1432
SspDI	GGCGCC	1 cut(s)	1923
SspI	AATATT	1 cut(s)	1356
SspMI	CTAG	7 cut(s)	33, 69, 150, 206, 314, 1262, 1325
SstI	GAGCTC	1 cut(s)	643
StyD4I	CCNGG	5 cut(s)	41, 289, 393, 728, 1216
StyI	CCWWGG	2 cut(s)	741, 1661
TaaI	ACNGT	5 cut(s)	163, 463, 694, 1571, 1607
TaqI	TCGA	9 cut(s)	485, 705, 950, 1047, 1130, 1209, 1290, 1351, 1449
TatI	WGTACW	2 cut(s)	805, 1510
TfiI	GAWTC	2 cut(s)	226, 1060
Tru1I	TTAA	4 cut(s)	750, 776, 780, 1358
Tru9I	TTAA	4 cut(s)	750, 776, 780, 1358
TscAI	CASTG	4 cut(s)	91, 634, 1639, 1651
TseFI	GTSAC	3 cut(s)	10, 1481, 1785
TseI	GCWGC	6 cut(s)	317, 524, 589, 974, 1027, 1487
Tsp45I	GTSAC	3 cut(s)	10, 1481, 1785
TspDTI	ATGAA	8 cut(s)	329, 488, 1164, 1179, 1306, 1580, 1781, 1926
TspGWI	ACGGA	3 cut(s)	348, 419, 1896
TspRI	CASTG	4 cut(s)	91, 634, 1639, 1651
VpaK11BI	GGWCC	1 cut(s)	1342
XapI	RAATTY	2 cut(s)	771, 1069
XceI	RCATGY	2 cut(s)	83, 582
XmiI	GTMKAC	1 cut(s)	986
XspI	CTAG	7 cut(s)	33, 69, 150, 206, 314, 1262, 1325
ZrmI	AGTACT	1 cut(s)	807
Zsp2I	ATGCAT	2 cut(s)	580, 1846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.