Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0008400

Physical Location & Seq

Genomic Coordinates Forward (+)

52410 .. 55010

Gene Structure 2601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g00110.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGTATAGAAGAAGAACAAGTGAATCTGAACCCAATAGTTTGCAAAACAACAAGGAAGAGGAAACAGAAACAGATGGAGATGGAGGAGGAAAGATGTGGATTCGGATACATGTTGGGGGATTGGGAGGTACTGTGACGGAGGTGGACCTGCGTCGGATGTTCTCCGGCGGAGGAACCGTGGAGGGAGTGGACATCGTCAGAACCAAAGGTCGCAGCTTCGCCTACGTCGACTTCCTCCCTTCCGACGACAAGTCCCTCTCCAAGCTCTTCACGACGTACAATGGGTGCGCGTGGAAGGGAGGGAAGCTGAGGCTCCAAAAGGCTAAAGAAGATTATCCTGTTCGCTTGCAACGCGAATGGGATGAAGATGCTGCTCGACTTGCTGCTGCTCCTCCTCCTCCAGATGATGCTCCAGATGATGCACATGATATTAAACATTCACTATCACACTCAACCAACACCAGCAGCAACAACGCGAAGCAACTTCGGATTTTCTTCCCTGCACTAAGAACCGTGAAAGCTTTGCCCTTTACTGGAACTGGCAAACACAAATACAGCTTCCAGCGTCTTCAAACTCCTTCTCTCCCTGTCCATTTCTGCGACTGTGAAGAGCATTATGTCCCCGTCCCTTCTCAACCTACTACTACAAAACCCAATCAAACTCAATCCGACAAGTTATTATGTGATAATGGGATCAATGAGCAAGAGCTTAATATAATGACTAAAGTCATGGACAAGCTATTCCAAACTCAAAATGAAACAAATGTCGATCATGATGGTACTCATCAACAACCCCATCAACTGCATCTTGCTGCTACTACTCCCCCTGACGAAGACAACCTTATCATCAACGTTGTCTCCAGCAACCAGGAAATAGTCGAAAAACTATCAGAATTTCAGGAATTTAAATCCACTGAAACACAAGCTTTGAAAGGGAAAAGATCGTCACCAAGTGAAGCGCAGATAAATATTAATGAACCTCCTAAGAAAAAGAGGAAATCCCTGCCCGGTGATTACAACCATCAAAAGGAATTGGAGGCAGCTCTTTCTGGCAGCAAGAAGAATTTGCCAACCCAGTCAAAAGTTTCAGGAAAATTCTTTGGAGCACAACCAGATCAACCAGAATTAGGTCAACAACAGGTTTCTTGGTCTCAGAAGTCTTCTTGGAGACAACTTGTCAGTCATAGGGGAAGCAGTTCATTCAGCGTTTCACATGTACTGACCAGGATTGCTCCATCTGCTGACCAAGTTGAAACAAAATCTGGTAGTTCAGAAGTGTCCCTTTCTGATAGCGAAAACCAGGATTTGGAAAGCAATGGAAACTCGGAAGACCAGCCCAGTGAGATGGAACTGGTGGAACCTACCAAGTCAGTTGTAGTTTCAAATAAGTCATCGGGTAGAGGTGCTTCTTCCACTGACCAAGTTGAACCAAAATCTGTTAGTTTAGAAGTGCTCCTATCGGATAGCGAAAACCAGGATTTGGAAAGCAATGAAAACTTGGAAGACCAGCCCAGTGATATGGAACTGGTGGAACCTCAACCTACCAAGTCAATTGGAATTTCAAATGAGTTTTCAGGTAGACGTCCTTCTTCCGCTGACCAGGTTGAACCAAAATCTGGTAGTCCAGAAGTGCCCCTTTCTGATAGTGAAAGCCAGGATCCAGAAAGCAATGAAAACTTGGAAGACCAGCCCAGTGATATGGAACTGGTGGAACCTCAACCTACCAAGTCAGTTGTAGTTTCAAATAAGTTGTCGGGTAGAGGTTCTTCATGGCGCCGGCAATCCTCATGGACACAGTTAGTGAATGATAATACTGACAGTTCATTCAGCATAAAACAAATTGTGCCAGGTATCTCTTCTGAGCAGCAGGTCCTTCCAAACCCCAAAGGTGCTGATCCTGTGAGCTCCACTGACGGCAAGCTTACGGAGATGGTAAAACAAGATAATGACAAGGGCAGGTCTTGTTTAGGAATTGGAAGAGAAGACAGTGTTTTACTAGGTAGTCTAGAAGATACTATAGTAGACAACGATGGTGCTTATGATCCAGATGATATAACACCAAAGCAAGCATCTGCGGCAAATATTGAGATAGGTGAAACTTGCTCATTTATGAGGACTGCTTCTTCGTTGAAGGAATGGGCGAAAATCAAAGTTGCTCTAAGTGGATCATTGAAAAAAAAGAATGTTGAGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

732

Amino Acids

80.25

Weight (kDa)

5.0

Isoelectric Point (pI)

52.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58130
fragaria_vesca	FvH4_4g00130 FvH4_4g00130 FvH4_4g00130 FvH4_4g00130 FvH4_4g00130
malus_domestica	MD04G1000700.v1.1
prunus_persica	Prupe.1G000700_v2.0.a1
pyrus_communis	pycom04g00110
rosa_chinensis	RchiOBHm_Chr4g0384741 RchiOBHm_Chr5g0003141
rosa_laevigata	RLG00000010276
rosa_multiflora	Rmu_sc0000146.1_g000020 Rmu_sc0000146.1_g000021 Rmu_sc0001322.1_g000020
rosa_roxburghii	Rroxscaffold_5G00332800
rosa_rugosa	Rorug03G0297400
rosa_samantha	Rh4AG000800 Rh4BG000700 Rh4CG000600 Rh4DG000700
rosa_wichuraiana	Rw0G022000 Rw4G000810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1585
Acc36I	ACCTGC	3 cut(s)	156, 1858, 1947
AccB1I	GGYRCC	1 cut(s)	1773
AccB7I	CCANNNNNTGG	3 cut(s)	1306, 1480, 1616
AccI	GTMKAC	3 cut(s)	228, 1579, 2022
AccII	CGCG	3 cut(s)	290, 354, 476
AciI	CCGC	3 cut(s)	168, 1593, 2075
AclI	AACGTT	1 cut(s)	852
AclWI	GGATC	6 cut(s)	701, 1652, 1665, 1889, 2036, 2173
AcsI	RAATTY	5 cut(s)	893, 902, 1063, 1094, 1557
AcyI	GRCGYC	2 cut(s)	1582, 1774
AdeI	CACNNNGTG	1 cut(s)	953
AfaI	GTAC	4 cut(s)	130, 278, 781, 1218
AfiI	CCNNNNNNNGG	6 cut(s)	533, 1027, 1127, 1306, 1480, 1616
AflIII	ACRYGT	2 cut(s)	109, 1213
AhdI	GACNNNNNGTC	2 cut(s)	250, 1175
AjnI	CCWGG	7 cut(s)	867, 1223, 1299, 1473, 1599, 1653, 1846
Alw21I	GWGCWC	3 cut(s)	1108, 1455, 1907
Alw26I	GTCTC	3 cut(s)	862, 1155, 1162
AlwI	GGATC	6 cut(s)	701, 1652, 1665, 1889, 2036, 2173
ApeKI	GCWGC	9 cut(s)	213, 371, 383, 386, 465, 812, 1040, 1053, 1864
ApoI	RAATTY	5 cut(s)	893, 902, 1063, 1094, 1557
ArsI	GACNNNNNNTTYG	4 cut(s)	1736, 1768, 2107, 2139
AseI	ATTAAT	1 cut(s)	972
Asp700I	GAANNNNTTC	1 cut(s)	1195
AspLEI	GCGC	3 cut(s)	290, 961, 1776
AspS9I	GGNCC	2 cut(s)	145, 1870
AsuC2I	CCSGG	1 cut(s)	1008
AsuHPI	GGTGA	3 cut(s)	939, 1022, 2105
AvaII	GGWCC	2 cut(s)	145, 1870
BaeGI	GKGCMC	1 cut(s)	1635
BaeI	ACNNNNGTAYC	2 cut(s)	2004, 2037
BamHI	GGATCC	1 cut(s)	1657
BanI	GGYRCC	1 cut(s)	1773
BanII	GRGCYC	1 cut(s)	1907
BarI	GAAGNNNNNNTAC	6 cut(s)	1390, 1422, 1570, 1602, 1750, 1782
BbsI	GAAGAC	7 cut(s)	560, 840, 1152, 1335, 1509, 1689, 1989
Bbv12I	GWGCWC	3 cut(s)	1108, 1455, 1907
BbvCI	CCTCAGC	1 cut(s)	308
BbvI	GCAGC	9 cut(s)	225, 358, 370, 373, 477, 799, 1052, 1065, 1876
BccI	CCATC	9 cut(s)	68, 74, 770, 804, 1029, 1243, 1339, 1924, 2024
BceAI	ACGGC	1 cut(s)	1930
BciT130I	CCWGG	7 cut(s)	869, 1225, 1301, 1475, 1601, 1655, 1848
BciVI	GTATCC	1 cut(s)	99
BcnI	CCSGG	1 cut(s)	1008
BcoDI	GTCTC	3 cut(s)	862, 1155, 1162
BfaI	CTAG	2 cut(s)	1997, 2006
BfmI	CTRYAG	1 cut(s)	2016
BfoI	RGCGCY	1 cut(s)	1777
BfuAI	ACCTGC	3 cut(s)	156, 1858, 1947
BfuI	GTATCC	1 cut(s)	99
Bme1390I	CCNGG	8 cut(s)	869, 1008, 1225, 1301, 1475, 1601, 1655, 1848
Bme18I	GGWCC	2 cut(s)	145, 1870
BmeRI	GACNNNNNGTC	2 cut(s)	250, 1175
BmgT120I	GGNCC	2 cut(s)	145, 1870
BmiI	GGNNCC	7 cut(s)	175, 314, 1359, 1533, 1659, 1713, 1775
BmrFI	CCNGG	8 cut(s)	869, 1008, 1225, 1301, 1475, 1601, 1655, 1848
BmrI	ACTGGG	4 cut(s)	1069, 1332, 1506, 1686
BmsI	GCATC	5 cut(s)	358, 397, 409, 814, 2078
BmuI	ACTGGG	4 cut(s)	1069, 1332, 1506, 1686
BoxI	GACNNNNGTC	2 cut(s)	150, 725
BpiI	GAAGAC	7 cut(s)	560, 840, 1152, 1335, 1509, 1689, 1989
BpmI	CTGGAG	3 cut(s)	384, 396, 844
Bpu10I	CCTNAGC	1 cut(s)	308
BpuMI	CCSGG	1 cut(s)	1008
BsaHI	GRCGYC	2 cut(s)	1582, 1774
BsaI	GGTCTC	1 cut(s)	1155
BsaJI	CCNNGG	1 cut(s)	177
BsaXI	ACNNNNNCTCC	6 cut(s)	117, 147, 162, 192, 842, 872
Bsc4I	CCNNNNNNNGG	6 cut(s)	533, 1027, 1127, 1306, 1480, 1616
Bse118I	RCCGGY	1 cut(s)	1776
Bse1I	ACTGG	9 cut(s)	538, 544, 1075, 1338, 1356, 1512, 1530, 1692, 1710
Bse3DI	GCAATG	3 cut(s)	1321, 1495, 1675
BseBI	CCWGG	7 cut(s)	869, 1225, 1301, 1475, 1601, 1655, 1848
BseDI	CCNNGG	1 cut(s)	177
BseGI	GGATG	2 cut(s)	162, 367
BseLI	CCNNNNNNNGG	6 cut(s)	533, 1027, 1127, 1306, 1480, 1616
BseMI	GCAATG	3 cut(s)	1321, 1495, 1675
BseMII	CTCAG	3 cut(s)	299, 1166, 1851
BseNI	ACTGG	9 cut(s)	538, 544, 1075, 1338, 1356, 1512, 1530, 1692, 1710
BseRI	GAGGAG	4 cut(s)	99, 381, 384, 387
BseSI	GKGCMC	1 cut(s)	1635
BseXI	GCAGC	9 cut(s)	225, 358, 370, 373, 477, 799, 1052, 1065, 1876
BsgI	GTGCAG	1 cut(s)	486
Bsh1236I	CGCG	3 cut(s)	290, 354, 476
BshNI	GGYRCC	1 cut(s)	1773
BsiHKAI	GWGCWC	3 cut(s)	1108, 1455, 1907
BsiSI	CCGG	3 cut(s)	165, 1008, 1777
BslFI	GGGAC	4 cut(s)	238, 605, 611, 1264
BslI	CCNNNNNNNGG	6 cut(s)	533, 1027, 1127, 1306, 1480, 1616
BsmAI	GTCTC	3 cut(s)	862, 1155, 1162
BsmFI	GGGAC	4 cut(s)	238, 605, 611, 1264
Bso31I	GGTCTC	1 cut(s)	1155
Bsp1286I	GDGCHC	4 cut(s)	1108, 1455, 1635, 1907
Bsp143I	GATC	8 cut(s)	693, 769, 941, 1114, 1657, 1894, 2041, 2165
BspACI	CCGC	3 cut(s)	168, 1593, 2075
BspCNI	CTCAG	3 cut(s)	300, 1165, 1852
BspFNI	CGCG	3 cut(s)	290, 354, 476
BspHI	TCATGA	1 cut(s)	772
BspLI	GGNNCC	7 cut(s)	175, 314, 1359, 1533, 1659, 1713, 1775
BspMI	ACCTGC	3 cut(s)	156, 1858, 1947
BspPI	GGATC	6 cut(s)	701, 1652, 1665, 1889, 2036, 2173
BspQI	GCTCTTC	2 cut(s)	272, 603
BspT107I	GGYRCC	1 cut(s)	1773
BspTNI	GGTCTC	1 cut(s)	1155
BsrDI	GCAATG	3 cut(s)	1321, 1495, 1675
BsrFI	RCCGGY	1 cut(s)	1776
BsrI	ACTGG	9 cut(s)	538, 544, 1075, 1338, 1356, 1512, 1530, 1692, 1710
BssAI	RCCGGY	1 cut(s)	1776
BssECI	CCNNGG	1 cut(s)	177
BssMI	GATC	8 cut(s)	693, 769, 941, 1114, 1657, 1894, 2041, 2165
BssNI	GRCGYC	2 cut(s)	1582, 1774
Bst2UI	CCWGG	7 cut(s)	869, 1225, 1301, 1475, 1601, 1655, 1848
Bst4CI	ACNGT	7 cut(s)	133, 178, 514, 605, 1797, 1820, 1988
Bst6I	CTCTTC	5 cut(s)	51, 272, 603, 1861, 1972
BstACI	GRCGYC	2 cut(s)	1582, 1774
BstC8I	GCNNGC	4 cut(s)	347, 1778, 1919, 2067
BstDEI	CTNAG	6 cut(s)	308, 506, 984, 1152, 1860, 2159
BstDSI	CCRYGG	1 cut(s)	177
BstF5I	GGATG	2 cut(s)	162, 367
BstFNI	CGCG	3 cut(s)	290, 354, 476
BstH2I	RGCGCY	1 cut(s)	1777
BstHHI	GCGC	3 cut(s)	290, 961, 1776
BstKTI	GATC	8 cut(s)	696, 772, 944, 1117, 1660, 1897, 2044, 2168
BstMAI	GTCTC	3 cut(s)	862, 1155, 1162
BstMBI	GATC	8 cut(s)	693, 769, 941, 1114, 1657, 1894, 2041, 2165
BstMWI	GCNNNNNNNGC	4 cut(s)	351, 380, 1238, 2075
BstNI	CCWGG	7 cut(s)	869, 1225, 1301, 1475, 1601, 1655, 1848
BstNSI	RCATGY	2 cut(s)	113, 1217
BstPAI	GACNNNNGTC	2 cut(s)	150, 725
BstSCI	CCNGG	8 cut(s)	867, 1006, 1223, 1299, 1473, 1599, 1653, 1846
BstSFI	CTRYAG	1 cut(s)	2016
BstSLI	GKGCMC	1 cut(s)	1635
BstUI	CGCG	3 cut(s)	290, 354, 476
BstV1I	GCAGC	9 cut(s)	225, 358, 370, 373, 477, 799, 1052, 1065, 1876
BstV2I	GAAGAC	7 cut(s)	560, 840, 1152, 1335, 1509, 1689, 1989
BstX2I	RGATCY	1 cut(s)	1657
BstXI	CCANNNNNNTGG	3 cut(s)	1345, 1519, 1699
BstYI	RGATCY	1 cut(s)	1657
BsuI	GTATCC	1 cut(s)	99
BtgI	CCRYGG	1 cut(s)	177
BtsCI	GGATG	2 cut(s)	162, 367
BtsIMutI	CAGTG	7 cut(s)	912, 1345, 1413, 1519, 1699, 1908, 1993
BveI	ACCTGC	3 cut(s)	156, 1858, 1947
Cac8I	GCNNGC	4 cut(s)	347, 1778, 1919, 2067
CciI	TCATGA	1 cut(s)	772
CfoI	GCGC	3 cut(s)	290, 961, 1776
Cfr10I	RCCGGY	1 cut(s)	1776
Cfr13I	GGNCC	2 cut(s)	145, 1870
CseI	GACGC	2 cut(s)	140, 554
CsiI	ACCWGGT	1 cut(s)	1599
Csp6I	GTAC	4 cut(s)	129, 277, 780, 1217
CviAII	CATG	7 cut(s)	110, 425, 730, 773, 1214, 1770, 1788
CviQI	GTAC	4 cut(s)	129, 277, 780, 1217
DdeI	CTNAG	6 cut(s)	308, 506, 984, 1152, 1860, 2159
DinI	GGCGCC	1 cut(s)	1775
DpnI	GATC	8 cut(s)	695, 771, 943, 1116, 1659, 1896, 2043, 2167
DpnII	GATC	8 cut(s)	693, 769, 941, 1114, 1657, 1894, 2041, 2165
DraI	TTTAAA	1 cut(s)	907
DraIII	CACNNNGTG	1 cut(s)	953
DriI	GACNNNNNGTC	2 cut(s)	250, 1175
Eam1104I	CTCTTC	5 cut(s)	51, 272, 603, 1861, 1972
Eam1105I	GACNNNNNGTC	2 cut(s)	250, 1175
EarI	CTCTTC	5 cut(s)	51, 272, 603, 1861, 1972
EciI	GGCGGA	1 cut(s)	183
Ecl136II	GAGCTC	1 cut(s)	1905
Eco24I	GRGCYC	1 cut(s)	1907
Eco31I	GGTCTC	1 cut(s)	1155
Eco47I	GGWCC	2 cut(s)	145, 1870
Eco53kI	GAGCTC	1 cut(s)	1905
EcoICRI	GAGCTC	1 cut(s)	1905
EcoO109I	RGGNCCY	1 cut(s)	1870
EcoRII	CCWGG	7 cut(s)	867, 1223, 1299, 1473, 1599, 1653, 1846
EcoT38I	GRGCYC	1 cut(s)	1907
EgeI	GGCGCC	1 cut(s)	1775
EheI	GGCGCC	1 cut(s)	1775
FaeI	CATG	7 cut(s)	113, 428, 733, 776, 1217, 1773, 1791
FalI	AAGNNNNNCTT	6 cut(s)	825, 857, 1266, 1298, 1620, 1652
FaqI	GGGAC	4 cut(s)	238, 605, 611, 1264
FatI	CATG	7 cut(s)	109, 424, 729, 772, 1213, 1769, 1787
FblI	GTMKAC	3 cut(s)	228, 1579, 2022
FokI	GGATG	2 cut(s)	169, 374
FriOI	GRGCYC	1 cut(s)	1907
FspBI	CTAG	2 cut(s)	1997, 2006
GlaI	GCGC	3 cut(s)	289, 960, 1775
GsuI	CTGGAG	3 cut(s)	384, 396, 844
HaeII	RGCGCY	1 cut(s)	1777
HapII	CCGG	3 cut(s)	165, 1008, 1777
HgaI	GACGC	2 cut(s)	140, 554
HhaI	GCGC	3 cut(s)	290, 961, 1776
Hin1I	GRCGYC	2 cut(s)	1582, 1774
Hin1II	CATG	7 cut(s)	113, 428, 733, 776, 1217, 1773, 1791
Hin6I	GCGC	3 cut(s)	288, 959, 1774
HinP1I	GCGC	3 cut(s)	288, 959, 1774
HincII	GTYRAC	2 cut(s)	229, 1133
HindII	GTYRAC	2 cut(s)	229, 1133
HindIII	AAGCTT	3 cut(s)	519, 924, 1919
HinfI	GANTC	2 cut(s)	23, 100
HpaII	CCGG	3 cut(s)	165, 1008, 1777
HphI	GGTGA	3 cut(s)	939, 1022, 2105
Hpy166II	GTNNAC	6 cut(s)	145, 190, 229, 1133, 1580, 2023
Hpy8I	GTNNAC	6 cut(s)	145, 190, 229, 1133, 1580, 2023
Hpy99I	CGWCG	4 cut(s)	156, 230, 248, 277
HpyAV	CCTTC	7 cut(s)	249, 289, 588, 639, 1596, 1883, 2125
HpyCH4III	ACNGT	7 cut(s)	133, 178, 514, 605, 1797, 1820, 1988
HpyCH4IV	ACGT	4 cut(s)	225, 275, 852, 1582
HpyCH4V	TGCA	5 cut(s)	43, 349, 422, 503, 805
HpyF10VI	GCNNNNNNNGC	4 cut(s)	351, 380, 1238, 2075
HpyF3I	CTNAG	6 cut(s)	308, 506, 984, 1152, 1860, 2159
HpySE526I	ACGT	4 cut(s)	225, 275, 852, 1582
Hsp92I	GRCGYC	2 cut(s)	1582, 1774
Hsp92II	CATG	7 cut(s)	113, 428, 733, 776, 1217, 1773, 1791
HspAI	GCGC	3 cut(s)	288, 959, 1774
KasI	GGCGCC	1 cut(s)	1773
KroI	GCCGGC	1 cut(s)	1776
KroNI	GCCGGC	1 cut(s)	1778
Kzo9I	GATC	8 cut(s)	693, 769, 941, 1114, 1657, 1894, 2041, 2165
LguI	GCTCTTC	2 cut(s)	272, 603
LmnI	GCTCC	7 cut(s)	318, 394, 415, 1103, 1237, 1458, 1910
Lsp1109I	GCAGC	9 cut(s)	225, 358, 370, 373, 477, 799, 1052, 1065, 1876
LweI	GCATC	5 cut(s)	358, 397, 409, 814, 2078
MabI	ACCWGGT	1 cut(s)	1599
MaeI	CTAG	2 cut(s)	1997, 2006
MaeII	ACGT	4 cut(s)	225, 275, 852, 1582
MaeIII	GTNAC	2 cut(s)	133, 945
MalI	GATC	8 cut(s)	695, 771, 943, 1116, 1659, 1896, 2043, 2167
MboI	GATC	8 cut(s)	693, 769, 941, 1114, 1657, 1894, 2041, 2165
MfeI	CAATTG	1 cut(s)	1551
MflI	RGATCY	1 cut(s)	1657
MhlI	GDGCHC	4 cut(s)	1108, 1455, 1635, 1907
Mly113I	GGCGCC	1 cut(s)	1774
MmeI	TCCRAC	3 cut(s)	134, 267, 693
MroNI	GCCGGC	1 cut(s)	1776
MroXI	GAANNNNTTC	1 cut(s)	1195
MseI	TTAA	4 cut(s)	432, 711, 906, 972
MspA1I	CMGCKG	1 cut(s)	1595
MspI	CCGG	3 cut(s)	165, 1008, 1777
MspR9I	CCNGG	8 cut(s)	869, 1008, 1225, 1301, 1475, 1601, 1655, 1848
MunI	CAATTG	1 cut(s)	1551
MvaI	CCWGG	7 cut(s)	869, 1225, 1301, 1475, 1601, 1655, 1848
MvnI	CGCG	3 cut(s)	290, 354, 476
MwoI	GCNNNNNNNGC	4 cut(s)	351, 380, 1238, 2075
NaeI	GCCGGC	1 cut(s)	1778
NarI	GGCGCC	1 cut(s)	1774
NciI	CCSGG	1 cut(s)	1008
NdeII	GATC	8 cut(s)	693, 769, 941, 1114, 1657, 1894, 2041, 2165
NgoMIV	GCCGGC	1 cut(s)	1776
NlaIII	CATG	7 cut(s)	113, 428, 733, 776, 1217, 1773, 1791
NlaIV	GGNNCC	7 cut(s)	175, 314, 1359, 1533, 1659, 1713, 1775
NmuCI	GTSAC	2 cut(s)	133, 945
NspI	RCATGY	2 cut(s)	113, 1217
PagI	TCATGA	1 cut(s)	772
PciI	ACATGT	2 cut(s)	109, 1213
PciSI	GCTCTTC	2 cut(s)	272, 603
PcsI	WCGNNNNNNNCGW	1 cut(s)	225
PdiI	GCCGGC	1 cut(s)	1778
PdmI	GAANNNNTTC	1 cut(s)	1195
PfeI	GAWTC	2 cut(s)	23, 100
PflFI	GACNNNGTC	1 cut(s)	194
PflMI	CCANNNNNTGG	3 cut(s)	1306, 1480, 1616
PluTI	GGCGCC	1 cut(s)	1777
PpuMI	RGGWCCY	1 cut(s)	1870
PscI	ACATGT	2 cut(s)	109, 1213
PshAI	GACNNNNGTC	2 cut(s)	150, 725
PshBI	ATTAAT	1 cut(s)	972
Psp124BI	GAGCTC	1 cut(s)	1907
Psp1406I	AACGTT	1 cut(s)	852
Psp5II	RGGWCCY	1 cut(s)	1870
Psp6I	CCWGG	7 cut(s)	867, 1223, 1299, 1473, 1599, 1653, 1846
PspGI	CCWGG	7 cut(s)	867, 1223, 1299, 1473, 1599, 1653, 1846
PspN4I	GGNNCC	7 cut(s)	175, 314, 1359, 1533, 1659, 1713, 1775
PspPI	GGNCC	2 cut(s)	145, 1870
PspPPI	RGGWCCY	1 cut(s)	1870
PsuI	RGATCY	1 cut(s)	1657
PsyI	GACNNNGTC	1 cut(s)	194
RsaI	GTAC	4 cut(s)	130, 278, 781, 1218
RsaNI	GTAC	4 cut(s)	129, 277, 780, 1217
SacI	GAGCTC	1 cut(s)	1907
SalI	GTCGAC	1 cut(s)	227
SapI	GCTCTTC	2 cut(s)	272, 603
SaqAI	TTAA	4 cut(s)	432, 711, 906, 972
Sau3AI	GATC	8 cut(s)	693, 769, 941, 1114, 1657, 1894, 2041, 2165
Sau96I	GGNCC	2 cut(s)	145, 1870
ScrFI	CCNGG	8 cut(s)	869, 1008, 1225, 1301, 1475, 1601, 1655, 1848
SduI	GDGCHC	4 cut(s)	1108, 1455, 1635, 1907
SexAI	ACCWGGT	1 cut(s)	1599
SfaNI	GCATC	5 cut(s)	358, 397, 409, 814, 2078
SfcI	CTRYAG	1 cut(s)	2016
SfoI	GGCGCC	1 cut(s)	1775
SinI	GGWCC	2 cut(s)	145, 1870
SmiI	ATTTAAAT	1 cut(s)	907
SsiI	CCGC	3 cut(s)	168, 1593, 2075
SspDI	GGCGCC	1 cut(s)	1773
SspI	AATATT	2 cut(s)	970, 2083
SspMI	CTAG	2 cut(s)	1997, 2006
SstI	GAGCTC	1 cut(s)	1907
StyD4I	CCNGG	8 cut(s)	867, 1006, 1223, 1299, 1473, 1599, 1653, 1846
SwaI	ATTTAAAT	1 cut(s)	907
TaaI	ACNGT	7 cut(s)	133, 178, 514, 605, 1797, 1820, 1988
TaiI	ACGT	4 cut(s)	228, 278, 855, 1585
TaqI	TCGA	4 cut(s)	228, 376, 768, 879
TatI	WGTACW	1 cut(s)	1216
TauI	GCSGC	1 cut(s)	2078
TfiI	GAWTC	2 cut(s)	23, 100
Tru1I	TTAA	4 cut(s)	432, 711, 906, 972
Tru9I	TTAA	4 cut(s)	432, 711, 906, 972
TscAI	CASTG	7 cut(s)	919, 1345, 1420, 1519, 1699, 1915, 1993
TseFI	GTSAC	2 cut(s)	133, 945
TseI	GCWGC	9 cut(s)	213, 371, 383, 386, 465, 812, 1040, 1053, 1864
Tsp45I	GTSAC	2 cut(s)	133, 945
TspDTI	ATGAA	8 cut(s)	378, 771, 990, 1188, 1506, 1686, 1758, 1812
TspGWI	ACGGA	2 cut(s)	152, 1940
TspRI	CASTG	7 cut(s)	919, 1345, 1420, 1519, 1699, 1915, 1993
Tth111I	GACNNNGTC	1 cut(s)	194
Van91I	CCANNNNNTGG	3 cut(s)	1306, 1480, 1616
VpaK11BI	GGWCC	2 cut(s)	145, 1870
VspI	ATTAAT	1 cut(s)	972
XapI	RAATTY	5 cut(s)	893, 902, 1063, 1094, 1557
XbaI	TCTAGA	1 cut(s)	2005
XceI	RCATGY	2 cut(s)	113, 1217
XmiI	GTMKAC	3 cut(s)	228, 1579, 2022
XmnI	GAANNNNTTC	1 cut(s)	1195
XspI	CTAG	2 cut(s)	1997, 2006
ZraI	GACGTC	1 cut(s)	1583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.