RchiOBHm_Chr4g0384741

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0008400
Physical Location & Seq
Reverse (-)
76168 .. 78806
2639 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35829

Sequence Viewer

Length: 1977 bp
ATGATGGAAGTGGAACAAGGAGGAGGAAGAGAGCGAATATTCGTTGGGGGTTTGGGAGAGAGCGTGACGGAAGACGATCTGCAAAGGCTGTTCACCGGAGTTGGAGGAAGCGTCGACGGAATCGATATAATCAGAACCAAAGGCCGTAGCTTTGCTTACGTCGACTTTCTGCCTTGCTCAGACAAGTCCCTCTCCAAGCTCTTCGCCACGTATAATGGGTGCGTTTGGAAGGGCGGGAAGCTGAAACTCCACAAGGCTAAAGAACATTATCTTGTTCGTTTGAGACGAGAATGGGCTGAACTAGAAAATGCTCAACTTGCTGCTGAAATTAAGCACCACACCACCCAAGAAGCTAAAACTGCTTCACAACACAGCACCAAGCAGCTTCGCTTATTCTTTCCTGCTCTAAGAACCGTGAAAGCTTTGCCCTTTAGTGGAACTGGCAAGCACAAATACAGTTTCCAACGTGTTCAAGTTCCTTCTCTCCCCCTTCATTTCTGTGACTGTGAAGAGCATGCTGTTTTTGACCCTTCTCCTGATCAACAAAACCAATTACCTGACCATGTGATCAATGACAAAGAGCTTAGTATAATGAATAAAGTAATGGACAAGCTCTTACAAAAGGAATTGGAACATGTTTCTGATGATGCTGATCACAATACTACCGCCTCCCCTCTGCCTCGGCCTCTGCCTAGTCAACAACATGGTGAGCTTTATCTTCCTACTGAAGCGGAAGCTGAGCAAGACGACCTCATAATTAATATTGTGTCAAGTAAACATGAAGAAAACATACTATCGGCCTTGGAGGAATTGAGATCCAGTGGAACACAGGTGTGCAGTAAGATTAATGGACCTCCTAACAAAAAGAGGAAATCCCTTCTCAACAAGAGTTACAATGAAACAGAATTGGAGCCTGATATCCCTGGCTCAAAGACGGATTCTAAATCTCAACCAGATAAACCAGAGCTGGGAGTCCAACAATCAACTGCCCCGGTTTCATGGTCTCAGAAATGTTCATGGAGACAACTTGTCGGTCATAGGGACAACAGTGGGTTCAGTGTCTCACATATACTGACAGGCAGATCTTCTTCTAGTGACCAAATGGAGCCCAAATCTGGCAGTTCCGATGTGCACCAGTCTGAGGACCTGGCAAGTGACGGAAACTCAGAAGGCCAGCTGTCTGAGATGGAACCACTTAAGGGAAGATCAGAACATAAACCTACCAAGTCAGTATCTGACTCATATGAGTCGGGTAGAGTTCCTTCATGGCGTCAGGAATTATCTCTGACACAATTGACTGATGAGAATACTGGGAGTGTAACTGAACAGGCCCAGCCAAACTCTGGTTCTGGTGCTTTTGAAGTGTCCCATTCTGACAGCAAAAACCAGGACTTGGCAAGGGATGGAAACTTGGAAGGTCAGCTCTGTGAGATGGAACCGGTGGAGGAGAATGCGGATCCTCAACCTCAAAATGCATTATCAAACTCAACTAAGTCAGGTAGAGGAGCTTCATGGCGCCAGAAATCGTCCTGGACACAATTGATTAATGACAATACTGGAAGCTCATTCAGCATAACACAAGTTCTACCAGCTGGTATCTCTTTCAAGCAACAAGGGTTCCAAAAGCCCAGAGGTGTAGAAGTCATGAGCTCTTTTGGCAGCAAGCTCAAGGAAACAGTAAAGCAAGATAAGAATAAACTTACTAGAGGTGAATCCTCTTCTTTGGGGATAATTGGAAAGGAGGGGGATGGTTTACCACGGAGTACTCCTAAAGAGAATCAACAGATTATTGCCGGCAATGACAATGCTCCAGATCTGGGGAAAATATGTGATTTGACACCAAAGCAAGCATCTACAGGCACTGTTGACAAAGGTAAAACCTGCTTATTTGTGAGAAGTGCTGCTTCATTAAATGAATGGGCGAAAGCTAAGGCTGCCCTAAGTGGGTCACGAAAAAGAAAGAACAGCAACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

658

Amino Acids

72.22

Weight (kDa)

6.35

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 13 - 56 6.5e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1889
AccB1I GGYRCC 1 cut(s) 1515
AccB7I CCANNNNNTGG 2 cut(s) 1343, 1393
AccI GTMKAC 2 cut(s) 114, 162
AciI CCGC 4 cut(s) 234, 666, 731, 1454
AclWI GGATC 3 cut(s) 810, 1451, 1464
AcuI CTGAAG 1 cut(s) 747
AcyI GRCGYC 2 cut(s) 1270, 1516
AfaI GTAC 1 cut(s) 1765
AfiI CCNNNNNNNGG 9 cut(s) 434, 968, 1115, 1141, 1199, 1343, 1393, 1817, 1944
AflII CTTAAG 1 cut(s) 1196
AflIII ACRYGT 2 cut(s) 466, 634
AgeI ACCGGT 1 cut(s) 1438
AgsI TTSAA 3 cut(s) 473, 1361, 1606
AhdI GACNNNNNGTC 1 cut(s) 1028
AjnI CCWGG 4 cut(s) 922, 1146, 1386, 1529
AjuI GAANNNNNNNTTGG 2 cut(s) 1330, 1362
AleI CACNNNNGTG 1 cut(s) 832
Alw21I GWGCWC 2 cut(s) 1134, 1652
Alw26I GTCTC 4 cut(s) 277, 1008, 1015, 1066
Alw44I GTGCAC 1 cut(s) 1130
AlwI GGATC 3 cut(s) 810, 1451, 1464
AlwNI CAGNNNCTG 2 cut(s) 1235, 1862
AoxI GGCC 5 cut(s) 142, 683, 798, 1171, 1329
ApaLI GTGCAC 1 cut(s) 1130
ApeKI GCWGC 5 cut(s) 320, 382, 1659, 1901, 1934
AseI ATTAAT 3 cut(s) 759, 846, 1545
AsiGI ACCGGT 1 cut(s) 1438
AspLEI GCGC 1 cut(s) 1518
AspS9I GGNCC 3 cut(s) 851, 1144, 1330
AsuC2I CCSGG 1 cut(s) 992
AsuHPI GGTGA 3 cut(s) 85, 719, 1721
AvaII GGWCC 2 cut(s) 851, 1144
BaeGI GKGCMC 1 cut(s) 1134
BamHI GGATCC 1 cut(s) 1456
BanI GGYRCC 1 cut(s) 1515
BanII GRGCYC 2 cut(s) 1110, 1652
BarI GAAGNNNNNNTAC 6 cut(s) 774, 806, 1246, 1278, 1492, 1524
BbsI GAAGAC 1 cut(s) 78
Bbv12I GWGCWC 2 cut(s) 1134, 1652
BbvI GCAGC 5 cut(s) 307, 394, 1671, 1888, 1921
BccI CCATC 4 cut(s) 1180, 1397, 1426, 1742
BceAI ACGGC 1 cut(s) 129
BciT130I CCWGG 4 cut(s) 924, 1148, 1388, 1531
BclI TGATCA 3 cut(s) 538, 567, 652
BcnI CCSGG 1 cut(s) 992
BcoDI GTCTC 4 cut(s) 277, 1008, 1015, 1066
BfaI CTAG 4 cut(s) 302, 693, 1092, 1704
BfmI CTRYAG 1 cut(s) 1854
BfoI RGCGCY 1 cut(s) 1519
BfrI CTTAAG 1 cut(s) 1196
BfuAI ACCTGC 1 cut(s) 1889
BglII AGATCT 2 cut(s) 1082, 1813
BisI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
BlpI GCTNAGC 1 cut(s) 738
BlsI GCNGC 5 cut(s) 322, 384, 1661, 1903, 1936
BmcAI AGTACT 1 cut(s) 1765
Bme1390I CCNGG 5 cut(s) 924, 992, 1148, 1388, 1531
Bme18I GGWCC 2 cut(s) 851, 1144
BmeRI GACNNNNNGTC 1 cut(s) 1028
BmgT120I GGNCC 3 cut(s) 851, 1144, 1330
BmiI GGNNCC 7 cut(s) 912, 1107, 1191, 1437, 1458, 1517, 1619
BmrFI CCNGG 5 cut(s) 924, 992, 1148, 1388, 1531
BmrI ACTGGG 1 cut(s) 1320
BmsI GCATC 2 cut(s) 637, 1859
BmuI ACTGGG 1 cut(s) 1320
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 1 cut(s) 1794
Bpu10I CCTNAGC 1 cut(s) 1929
Bpu1102I GCTNAGC 1 cut(s) 738
BpuEI CTTGAG 1 cut(s) 1652
BpuMI CCSGG 1 cut(s) 992
Bsa29I ATCGAT 1 cut(s) 123
BsaAI YACGTR 1 cut(s) 210
BsaBI GATNNNNATC 1 cut(s) 651
BsaHI GRCGYC 2 cut(s) 1270, 1516
BsaI GGTCTC 1 cut(s) 1008
BsaJI CCNNGG 5 cut(s) 680, 801, 922, 990, 1757
BsaWI WCCGGW 2 cut(s) 95, 1438
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 96, 126
Bsc4I CCNNNNNNNGG 9 cut(s) 434, 968, 1115, 1141, 1199, 1343, 1393, 1817, 1944
Bse118I RCCGGY 2 cut(s) 1438, 1793
Bse1I ACTGG 5 cut(s) 445, 819, 1135, 1315, 1561
Bse3DI GCAATG 1 cut(s) 1804
Bse8I GATNNNNATC 1 cut(s) 651
BseBI CCWGG 4 cut(s) 924, 1148, 1388, 1531
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 5 cut(s) 680, 801, 922, 990, 1757
BseGI GGATG 2 cut(s) 1408, 1753
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 9 cut(s) 434, 968, 1115, 1141, 1199, 1343, 1393, 1817, 1944
BseMI GCAATG 1 cut(s) 1804
BseMII CTCAG 6 cut(s) 192, 729, 1019, 1131, 1173, 1179
BseNI ACTGG 5 cut(s) 445, 819, 1135, 1315, 1561
BseRI GAGGAG 3 cut(s) 36, 1460, 1518
BseSI GKGCMC 1 cut(s) 1134
BseXI GCAGC 5 cut(s) 307, 394, 1671, 1888, 1921
BseYI CCCAGC 2 cut(s) 967, 1332
BsgI GTGCAG 1 cut(s) 856
BshFI GGCC 5 cut(s) 144, 685, 800, 1173, 1331
BshNI GGYRCC 1 cut(s) 1515
BshTI ACCGGT 1 cut(s) 1438
BshVI ATCGAT 1 cut(s) 123
BsiHKAI GWGCWC 2 cut(s) 1134, 1652
BsiSI CCGG 4 cut(s) 96, 992, 1439, 1794
BslFI GGGAC 3 cut(s) 172, 1055, 1351
BslI CCNNNNNNNGG 9 cut(s) 434, 968, 1115, 1141, 1199, 1343, 1393, 1817, 1944
BsmAI GTCTC 4 cut(s) 277, 1008, 1015, 1066
BsmBI CGTCTC 1 cut(s) 277
BsmFI GGGAC 3 cut(s) 172, 1055, 1351
BsmI GAATGC 1 cut(s) 1456
BsnI GGCC 5 cut(s) 144, 685, 800, 1173, 1331
Bso31I GGTCTC 1 cut(s) 1008
Bsp1286I GDGCHC 3 cut(s) 1110, 1134, 1652
Bsp143I GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
Bsp1720I GCTNAGC 1 cut(s) 738
BspACI CCGC 4 cut(s) 234, 666, 731, 1454
BspANI GGCC 5 cut(s) 144, 685, 800, 1173, 1331
BspCNI CTCAG 6 cut(s) 191, 730, 1018, 1132, 1174, 1178
BspDI ATCGAT 1 cut(s) 123
BspHI TCATGA 1 cut(s) 1644
BspLI GGNNCC 7 cut(s) 912, 1107, 1191, 1437, 1458, 1517, 1619
BspMI ACCTGC 1 cut(s) 1889
BspPI GGATC 3 cut(s) 810, 1451, 1464
BspQI GCTCTTC 2 cut(s) 206, 504
BspT107I GGYRCC 1 cut(s) 1515
BspTI CTTAAG 1 cut(s) 1196
BspTNI GGTCTC 1 cut(s) 1008
BsrDI GCAATG 1 cut(s) 1804
BsrFI RCCGGY 2 cut(s) 1438, 1793
BsrI ACTGG 5 cut(s) 445, 819, 1135, 1315, 1561
BssAI RCCGGY 2 cut(s) 1438, 1793
BssECI CCNNGG 5 cut(s) 680, 801, 922, 990, 1757
BssMI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
BssNI GRCGYC 2 cut(s) 1270, 1516
BssT1I CCWWGG 1 cut(s) 801
Bst2UI CCWGG 4 cut(s) 924, 1148, 1388, 1531
Bst4CI ACNGT 6 cut(s) 415, 458, 506, 1049, 1678, 1864
Bst6I CTCTTC 4 cut(s) 22, 206, 504, 1723
BstACI GRCGYC 2 cut(s) 1270, 1516
BstAFI CTTAAG 1 cut(s) 1196
BstBAI YACGTR 1 cut(s) 210
BstC8I GCNNGC 6 cut(s) 446, 516, 1175, 1664, 1795, 1848
BstDSI CCRYGG 1 cut(s) 1757
BstF5I GGATG 2 cut(s) 1408, 1753
BstH2I RGCGCY 1 cut(s) 1519
BstHHI GCGC 1 cut(s) 1518
BstKTI GATC 9 cut(s) 79, 541, 570, 655, 818, 1085, 1208, 1459, 1816
BstMAI GTCTC 4 cut(s) 277, 1008, 1015, 1066
BstMBI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
BstMWI GCNNNNNNNGC 5 cut(s) 317, 359, 1569, 1656, 1934
BstNI CCWGG 4 cut(s) 924, 1148, 1388, 1531
BstNSI RCATGY 2 cut(s) 518, 638
BstSCI CCNGG 5 cut(s) 922, 990, 1146, 1386, 1529
BstSFI CTRYAG 1 cut(s) 1854
BstSLI GKGCMC 1 cut(s) 1134
BstV1I GCAGC 5 cut(s) 307, 394, 1671, 1888, 1921
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 4 cut(s) 815, 1082, 1456, 1813
BstYI RGATCY 4 cut(s) 815, 1082, 1456, 1813
Bsu15I ATCGAT 1 cut(s) 123
BsuRI GGCC 5 cut(s) 144, 685, 800, 1173, 1331
BsuTUI ATCGAT 1 cut(s) 123
BtgI CCRYGG 1 cut(s) 1757
BtsCI GGATG 2 cut(s) 1408, 1753
BtsIMutI CAGTG 4 cut(s) 826, 1054, 1063, 1860
BveI ACCTGC 1 cut(s) 1889
Cac8I GCNNGC 6 cut(s) 446, 516, 1175, 1664, 1795, 1848
CaiI CAGNNNCTG 2 cut(s) 1235, 1862
CciI TCATGA 1 cut(s) 1644
CfoI GCGC 1 cut(s) 1518
Cfr10I RCCGGY 2 cut(s) 1438, 1793
Cfr13I GGNCC 3 cut(s) 851, 1144, 1330
ClaI ATCGAT 1 cut(s) 123
CseI GACGC 2 cut(s) 100, 1259
Csp6I GTAC 1 cut(s) 1764
CspAI ACCGGT 1 cut(s) 1438
CviQI GTAC 1 cut(s) 1764
DinI GGCGCC 1 cut(s) 1517
DpnI GATC 9 cut(s) 78, 540, 569, 654, 817, 1084, 1207, 1458, 1815
DpnII GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
DriI GACNNNNNGTC 1 cut(s) 1028
Eam1104I CTCTTC 4 cut(s) 22, 206, 504, 1723
Eam1105I GACNNNNNGTC 1 cut(s) 1028
EarI CTCTTC 4 cut(s) 22, 206, 504, 1723
Ecl136II GAGCTC 1 cut(s) 1650
Eco130I CCWWGG 1 cut(s) 801
Eco24I GRGCYC 2 cut(s) 1110, 1652
Eco31I GGTCTC 1 cut(s) 1008
Eco32I GATATC 1 cut(s) 919
Eco47I GGWCC 2 cut(s) 851, 1144
Eco53kI GAGCTC 1 cut(s) 1650
Eco57I CTGAAG 1 cut(s) 747
EcoICRI GAGCTC 1 cut(s) 1650
EcoO109I RGGNCCY 1 cut(s) 1144
EcoRII CCWGG 4 cut(s) 922, 1146, 1386, 1529
EcoRV GATATC 1 cut(s) 919
EcoT14I CCWWGG 1 cut(s) 801
EcoT22I ATGCAT 1 cut(s) 1477
EcoT38I GRGCYC 2 cut(s) 1110, 1652
EgeI GGCGCC 1 cut(s) 1517
EheI GGCGCC 1 cut(s) 1517
ErhI CCWWGG 1 cut(s) 801
Esp3I CGTCTC 1 cut(s) 277
FalI AAGNNNNNCTT 2 cut(s) 1888, 1920
FaqI GGGAC 3 cut(s) 172, 1055, 1351
FauI CCCGC 1 cut(s) 227
FauNDI CATATG 1 cut(s) 1243
FbaI TGATCA 3 cut(s) 538, 567, 652
FblI GTMKAC 2 cut(s) 114, 162
Fnu4HI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
FokI GGATG 2 cut(s) 1415, 1760
FriOI GRGCYC 2 cut(s) 1110, 1652
Fsp4HI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
FspBI CTAG 4 cut(s) 302, 693, 1092, 1704
GlaI GCGC 1 cut(s) 1517
GluI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
GsaI CCCAGC 2 cut(s) 971, 1336
GsuI CTGGAG 1 cut(s) 1794
HaeII RGCGCY 1 cut(s) 1519
HaeIII GGCC 5 cut(s) 144, 685, 800, 1173, 1331
HapII CCGG 4 cut(s) 96, 992, 1439, 1794
HgaI GACGC 2 cut(s) 100, 1259
HhaI GCGC 1 cut(s) 1518
Hin1I GRCGYC 2 cut(s) 1270, 1516
Hin6I GCGC 1 cut(s) 1516
HinP1I GCGC 1 cut(s) 1516
HincII GTYRAC 4 cut(s) 115, 163, 698, 1867
HindII GTYRAC 4 cut(s) 115, 163, 698, 1867
HindIII AAGCTT 1 cut(s) 420
HinfI GANTC 7 cut(s) 120, 938, 972, 1238, 1247, 1712, 1777
HpaII CCGG 4 cut(s) 96, 992, 1439, 1794
HphI GGTGA 3 cut(s) 85, 719, 1721
Hpy166II GTNNAC 8 cut(s) 93, 115, 163, 698, 776, 1132, 1754, 1867
Hpy188III TCNNGA 5 cut(s) 536, 1274, 1645, 1811, 1950
Hpy8I GTNNAC 8 cut(s) 93, 115, 163, 698, 776, 1132, 1754, 1867
Hpy99I CGWCG 3 cut(s) 116, 119, 164
HpyAV CCTTC 8 cut(s) 223, 489, 500, 540, 887, 1163, 1272, 1409
HpyCH4III ACNGT 6 cut(s) 415, 458, 506, 1049, 1678, 1864
HpyCH4IV ACGT 3 cut(s) 159, 209, 466
HpyCH4V TGCA 4 cut(s) 82, 837, 1132, 1475
HpyF10VI GCNNNNNNNGC 5 cut(s) 317, 359, 1569, 1656, 1934
HpySE526I ACGT 3 cut(s) 159, 209, 466
Hsp92I GRCGYC 2 cut(s) 1270, 1516
HspAI GCGC 1 cut(s) 1516
KasI GGCGCC 1 cut(s) 1515
KroI GCCGGC 1 cut(s) 1793
KroNI GCCGGC 1 cut(s) 1795
Ksp22I TGATCA 3 cut(s) 538, 567, 652
Kzo9I GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
LguI GCTCTTC 2 cut(s) 206, 504
LmnI GCTCC 4 cut(s) 910, 1105, 1505, 1813
Lsp1109I GCAGC 5 cut(s) 307, 394, 1671, 1888, 1921
LweI GCATC 2 cut(s) 637, 1859
MaeI CTAG 4 cut(s) 302, 693, 1092, 1704
MaeII ACGT 3 cut(s) 159, 209, 466
MaeIII GTNAC 7 cut(s) 64, 500, 890, 1094, 1154, 1318, 1947
MalI GATC 9 cut(s) 78, 540, 569, 654, 817, 1084, 1207, 1458, 1815
MboI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
MfeI CAATTG 2 cut(s) 1292, 1538
MflI RGATCY 4 cut(s) 815, 1082, 1456, 1813
MhlI GDGCHC 3 cut(s) 1110, 1134, 1652
Mly113I GGCGCC 1 cut(s) 1516
MlyI GAGTC 3 cut(s) 981, 1232, 1256
MmeI TCCRAC 3 cut(s) 82, 487, 1000
Mph1103I ATGCAT 1 cut(s) 1477
MroNI GCCGGC 1 cut(s) 1793
MseI TTAA 6 cut(s) 330, 759, 846, 1197, 1545, 1910
MslI CAYNNNNRTG 2 cut(s) 498, 832
MspA1I CMGCKG 2 cut(s) 1177, 1592
MspCI CTTAAG 1 cut(s) 1196
MspI CCGG 4 cut(s) 96, 992, 1439, 1794
MspR9I CCNGG 5 cut(s) 924, 992, 1148, 1388, 1531
MunI CAATTG 2 cut(s) 1292, 1538
Mva1269I GAATGC 1 cut(s) 1456
MvaI CCWGG 4 cut(s) 924, 1148, 1388, 1531
MwoI GCNNNNNNNGC 5 cut(s) 317, 359, 1569, 1656, 1934
NaeI GCCGGC 1 cut(s) 1795
NarI GGCGCC 1 cut(s) 1516
NciI CCSGG 1 cut(s) 992
NdeI CATATG 1 cut(s) 1243
NdeII GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
NgoMIV GCCGGC 1 cut(s) 1793
NlaIV GGNNCC 7 cut(s) 912, 1107, 1191, 1437, 1458, 1517, 1619
NmeAIII GCCGAG 1 cut(s) 661
NmuCI GTSAC 5 cut(s) 64, 500, 1094, 1154, 1947
NsiI ATGCAT 1 cut(s) 1477
NspI RCATGY 2 cut(s) 518, 638
OliI CACNNNNGTG 1 cut(s) 832
PaeI GCATGC 1 cut(s) 518
PagI TCATGA 1 cut(s) 1644
PciI ACATGT 1 cut(s) 634
PciSI GCTCTTC 2 cut(s) 206, 504
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 283
PctI GAATGC 1 cut(s) 1456
PdiI GCCGGC 1 cut(s) 1795
PfeI GAWTC 4 cut(s) 120, 938, 1712, 1777
PflMI CCANNNNNTGG 2 cut(s) 1343, 1393
PfoI TCCNGGA 1 cut(s) 1529
PinAI ACCGGT 1 cut(s) 1438
PkrI GCNGC 5 cut(s) 322, 384, 1661, 1903, 1936
PleI GAGTC 3 cut(s) 980, 1232, 1255
PluTI GGCGCC 1 cut(s) 1519
PpsI GAGTC 3 cut(s) 980, 1232, 1255
Ppu21I YACGTR 1 cut(s) 210
PpuMI RGGWCCY 1 cut(s) 1144
PscI ACATGT 1 cut(s) 634
PshBI ATTAAT 3 cut(s) 759, 846, 1545
Psp124BI GAGCTC 1 cut(s) 1652
Psp5II RGGWCCY 1 cut(s) 1144
Psp6I CCWGG 4 cut(s) 922, 1146, 1386, 1529
PspFI CCCAGC 2 cut(s) 967, 1332
PspGI CCWGG 4 cut(s) 922, 1146, 1386, 1529
PspN4I GGNNCC 7 cut(s) 912, 1107, 1191, 1437, 1458, 1517, 1619
PspPI GGNCC 3 cut(s) 851, 1144, 1330
PspPPI RGGWCCY 1 cut(s) 1144
PstNI CAGNNNCTG 2 cut(s) 1235, 1862
PsuI RGATCY 4 cut(s) 815, 1082, 1456, 1813
PvuII CAGCTG 2 cut(s) 1177, 1592
RsaI GTAC 1 cut(s) 1765
RsaNI GTAC 1 cut(s) 1764
RseI CAYNNNNRTG 2 cut(s) 498, 832
SacI GAGCTC 1 cut(s) 1652
SalI GTCGAC 2 cut(s) 113, 161
SapI GCTCTTC 2 cut(s) 206, 504
SaqAI TTAA 6 cut(s) 330, 759, 846, 1197, 1545, 1910
SatI GCNGC 5 cut(s) 321, 383, 1660, 1902, 1935
Sau3AI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
Sau96I GGNCC 3 cut(s) 851, 1144, 1330
ScaI AGTACT 1 cut(s) 1765
SchI GAGTC 3 cut(s) 981, 1232, 1256
ScrFI CCNGG 5 cut(s) 924, 992, 1148, 1388, 1531
SduI GDGCHC 3 cut(s) 1110, 1134, 1652
SfaNI GCATC 2 cut(s) 637, 1859
SfcI CTRYAG 1 cut(s) 1854
SfoI GGCGCC 1 cut(s) 1517
SgrDI CGTCGACG 1 cut(s) 113
SinI GGWCC 2 cut(s) 851, 1144
SmiMI CAYNNNNRTG 2 cut(s) 498, 832
SmlI CTYRAG 2 cut(s) 1196, 1667
SmoI CTYRAG 2 cut(s) 1196, 1667
SphI GCATGC 1 cut(s) 518
SsiI CCGC 4 cut(s) 234, 666, 731, 1454
SspDI GGCGCC 1 cut(s) 1515
SspI AATATT 2 cut(s) 39, 763
SspMI CTAG 4 cut(s) 302, 693, 1092, 1704
SstI GAGCTC 1 cut(s) 1652
StyD4I CCNGG 5 cut(s) 922, 990, 1146, 1386, 1529
StyI CCWWGG 1 cut(s) 801
TaaI ACNGT 6 cut(s) 415, 458, 506, 1049, 1678, 1864
TaiI ACGT 3 cut(s) 162, 212, 469
TaqI TCGA 3 cut(s) 114, 123, 162
TaqII GACCGA 1 cut(s) 1022
TatI WGTACW 1 cut(s) 1763
TfiI GAWTC 4 cut(s) 120, 938, 1712, 1777
Tru1I TTAA 6 cut(s) 330, 759, 846, 1197, 1545, 1910
Tru9I TTAA 6 cut(s) 330, 759, 846, 1197, 1545, 1910
TscAI CASTG 4 cut(s) 826, 1054, 1063, 1867
TseFI GTSAC 5 cut(s) 64, 500, 1094, 1154, 1947
TseI GCWGC 5 cut(s) 320, 382, 1659, 1901, 1934
Tsp45I GTSAC 5 cut(s) 64, 500, 1094, 1154, 1947
TspGWI ACGGA 5 cut(s) 83, 132, 950, 1173, 1774
TspRI CASTG 4 cut(s) 826, 1054, 1063, 1867
Van91I CCANNNNNTGG 2 cut(s) 1343, 1393
Vha464I CTTAAG 1 cut(s) 1196
VneI GTGCAC 1 cut(s) 1130
VpaK11BI GGWCC 2 cut(s) 851, 1144
VspI ATTAAT 3 cut(s) 759, 846, 1545
XceI RCATGY 2 cut(s) 518, 638
XcmI CCANNNNNNNNNTGG 1 cut(s) 1340
XmiI GTMKAC 2 cut(s) 114, 162
XspI CTAG 4 cut(s) 302, 693, 1092, 1704
ZrmI AGTACT 1 cut(s) 1765
Zsp2I ATGCAT 1 cut(s) 1477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.