Rh4AG000800

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0008400
Physical Location & Seq
Reverse (-)
222323 .. 225017
2695 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG000800.1

Sequence Viewer

Length: 1965 bp
ATGATGGAAGTGGAACAAGGAGGAGGAAGAGAGCGAATATTCGTTGGGGGTTTGGGAGAGAGCGTGACGGAAGACGATCTGCAAAGGCTGTTCACCGGAGTTGGAGGAAGCGTCGACGGAATCGATATAATCAGAACCAAAGGCCGTAGCTTTGCTTACGTCGACTTTCTGCCTTGCTCAGACAAGTCCCTCTCCAAGCTCTTCGCCACGTATAATGGGTGCGTTTGGAAGGGCGGGAAGCTGAAGCTCCACAAGGCTAAAGAACATTATCTTGTTCGTTTGAGACGAGAATGGGCTGAACAAGAAAATGCTCAACTTGCTGCTCAAATTAAGCACCACACCACCCAAGAAGCTAAAACTGCTTCACAACACAGCACCAAGCAGCTTCGCTTATTCTTTCCTGCTCTAAGAACCGTGAAAGCTTTGCCCTTTAGTGGAACTGGCAAGCACAAATACAGTTTCCAACGTGTTCAAGTTCCTTCTCTCCCCCTTCATTTCTGTGACTGTGAAGAGCATGCTGTTTCTGACCCTTCTCCTGATCAACAAAACCAATTACCTGACCATGTTATCAATGACAAAGAGCTTAGTATAATGAATAAAGTAATGGACAAGCTCTTACAAAAGGAATTGGAACATGTTTCTGATGATGCTGATCACAATACTTCCGCCTCCCCTCTGCCTGGTCAACAACATCGTGGGCTTCATCTTCCTACTGAAGCGGAAGCTGAGGAAGACGACCTCATAATTAATATTGTGTCAAGTAAACATGAAGAAAACATACTATCGGCCTTGGAGGAATTGAGATCCAGCGGAACACAGGTGTGCAGTAAGATTAATGGACCTCCTAACAAAAAGAGGAAATCCCTTCTCAACAAGAATTACAATGAAATAGAATTGGAGCCTGATATCCCTGGCTCAAATACCGATTCTAAATCTCAACCAGATAAACCAGAGCTGGGTGTCCAACAATCCACTGCCCCGGTTTCATGGTCTCAGAAATGTTCATGGAGACAACTTGTCGGTCATAGGGACAACAGTGGGTTCAGTGTCTCACATATACTGACAGGCAGATCTTCTTCTAGTGACCAAATGGAGCCCAAATCTGGCAGTTCCGATGTGCACCAGTCTGAGGACCTGGCAAGTGATGGAAACTCAGAAGAACTGCTGTCTGAGATGGAACCACTTAAGGGAAGATCAGAACATAAACCTACCAAGTCGGTATCTGACTCATATGAGTCGGGTAGAGTTCCTTCATGGCATCAGGAATTATCTCTGACACAATTGACTGATGAGAATACTGGGAGTGTAACTGAACAGGCCCAGCCAAACTCTGGTTCTGGTGCTTTTGAAGTGCCCCATTCTGACAGCAAAAACCAGGACTTGGCAAGGGATGGAAACTTGGAAGGCCAGCTCTGTGAGATGGAACCGGTGGAGGAGAATGCGGATCCTCAACCTCAAAATGCACTATCAAACTCAACTAAGTCAGGTAGAGGAGCTTCTTGGCGCCAGAAATCGTCCTGGACACAATTGATTAATGACAATACTGGAAGCTCTTTCAGCATAACACAAGTTCTACCAGCTGGTATCTCTTTCAAGCAACAAGGGTTCCAAAAGCCCAGAGGTGTAGATGTCATGAGCTCTTTTGGCAGCAAGCTCAAGGAAACAGTAAAGCAAGATAAGAATAAACTTACTAGAGGTGAATCCTCTTCTCTGGGGATAATTGGAAAGGAGGGGGATGGTTTACCACGGAGTACTCCTAAAGAGAATCAACAGATTATTGCTGGCAATGACAATGCTCCAGATCTGGGGAAAATATGTGATTTGACACCAAAGCAAGCATCTACAGGCACTGTTGACAAAGGTAAAACCTGCTTATTTGTGAGAAGTGCTGCTTCATTAAATGAATGGGCGAAAGCTAAGGCTGCCCTAAGTGGGTCACGAAAAAGAAAGAACAGCAACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

654

Amino Acids

71.72

Weight (kDa)

6.24

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 13 - 56 6.5e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1877
AccB1I GGYRCC 1 cut(s) 1503
AccB7I CCANNNNNTGG 2 cut(s) 1331, 1381
AccI GTMKAC 2 cut(s) 114, 162
AciI CCGC 5 cut(s) 234, 666, 719, 810, 1442
AclWI GGATC 3 cut(s) 798, 1439, 1452
AcuI CTGAAG 2 cut(s) 263, 735
AcyI GRCGYC 1 cut(s) 1504
AfaI GTAC 1 cut(s) 1753
AflII CTTAAG 1 cut(s) 1184
AflIII ACRYGT 2 cut(s) 466, 634
AgeI ACCGGT 1 cut(s) 1426
AgsI TTSAA 3 cut(s) 473, 1349, 1594
AhdI GACNNNNNGTC 1 cut(s) 1016
AjnI CCWGG 5 cut(s) 679, 910, 1134, 1374, 1517
AjuI GAANNNNNNNTTGG 2 cut(s) 1318, 1350
AleI CACNNNNGTG 1 cut(s) 820
Alw21I GWGCWC 2 cut(s) 1122, 1640
Alw26I GTCTC 4 cut(s) 277, 996, 1003, 1054
Alw44I GTGCAC 1 cut(s) 1118
AlwI GGATC 3 cut(s) 798, 1439, 1452
AlwNI CAGNNNCTG 1 cut(s) 1850
AoxI GGCC 4 cut(s) 142, 786, 1317, 1405
ApaLI GTGCAC 1 cut(s) 1118
ApeKI GCWGC 5 cut(s) 320, 382, 1647, 1889, 1922
AseI ATTAAT 3 cut(s) 747, 834, 1533
AsiGI ACCGGT 1 cut(s) 1426
AspLEI GCGC 1 cut(s) 1506
AspS9I GGNCC 3 cut(s) 839, 1132, 1318
AsuC2I CCSGG 1 cut(s) 980
AsuHPI GGTGA 2 cut(s) 85, 1709
AvaII GGWCC 2 cut(s) 839, 1132
BaeGI GKGCMC 2 cut(s) 1122, 1356
BamHI GGATCC 1 cut(s) 1444
BanI GGYRCC 1 cut(s) 1503
BanII GRGCYC 2 cut(s) 1098, 1640
BarI GAAGNNNNNNTAC 6 cut(s) 762, 794, 1234, 1266, 1480, 1512
BbsI GAAGAC 2 cut(s) 78, 738
Bbv12I GWGCWC 2 cut(s) 1122, 1640
BbvCI CCTCAGC 1 cut(s) 726
BbvI GCAGC 5 cut(s) 307, 394, 1659, 1876, 1909
BccI CCATC 5 cut(s) 1139, 1168, 1385, 1414, 1730
BceAI ACGGC 1 cut(s) 129
BciT130I CCWGG 5 cut(s) 681, 912, 1136, 1376, 1519
BclI TGATCA 2 cut(s) 538, 652
BcnI CCSGG 1 cut(s) 980
BcoDI GTCTC 4 cut(s) 277, 996, 1003, 1054
BfaI CTAG 2 cut(s) 1080, 1692
BfmI CTRYAG 1 cut(s) 1842
BfoI RGCGCY 1 cut(s) 1507
BfrI CTTAAG 1 cut(s) 1184
BfuAI ACCTGC 1 cut(s) 1877
BglII AGATCT 2 cut(s) 1070, 1801
BisI GCNGC 5 cut(s) 321, 383, 1648, 1890, 1923
BlsI GCNGC 5 cut(s) 322, 384, 1649, 1891, 1924
BmcAI AGTACT 1 cut(s) 1753
Bme1390I CCNGG 6 cut(s) 681, 912, 980, 1136, 1376, 1519
Bme18I GGWCC 2 cut(s) 839, 1132
BmeRI GACNNNNNGTC 1 cut(s) 1016
BmgT120I GGNCC 3 cut(s) 839, 1132, 1318
BmiI GGNNCC 7 cut(s) 900, 1095, 1179, 1425, 1446, 1505, 1607
BmrFI CCNGG 6 cut(s) 681, 912, 980, 1136, 1376, 1519
BmrI ACTGGG 1 cut(s) 1308
BmsI GCATC 3 cut(s) 637, 1267, 1847
BmuI ACTGGG 1 cut(s) 1308
BpiI GAAGAC 2 cut(s) 78, 738
BpmI CTGGAG 1 cut(s) 1782
Bpu10I CCTNAGC 2 cut(s) 726, 1917
BpuEI CTTGAG 1 cut(s) 1640
BpuMI CCSGG 1 cut(s) 980
Bsa29I ATCGAT 1 cut(s) 123
BsaAI YACGTR 1 cut(s) 210
BsaBI GATNNNNATC 1 cut(s) 651
BsaHI GRCGYC 1 cut(s) 1504
BsaI GGTCTC 1 cut(s) 996
BsaJI CCNNGG 4 cut(s) 789, 910, 978, 1745
BsaWI WCCGGW 2 cut(s) 95, 1426
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 96, 126
Bse118I RCCGGY 1 cut(s) 1426
Bse1I ACTGG 4 cut(s) 445, 1123, 1303, 1549
Bse3DI GCAATG 1 cut(s) 1792
Bse8I GATNNNNATC 1 cut(s) 651
BseBI CCWGG 5 cut(s) 681, 912, 1136, 1376, 1519
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 4 cut(s) 789, 910, 978, 1745
BseGI GGATG 2 cut(s) 1396, 1741
BseJI GATNNNNATC 1 cut(s) 651
BseMI GCAATG 1 cut(s) 1792
BseMII CTCAG 6 cut(s) 192, 717, 1007, 1119, 1161, 1167
BseNI ACTGG 4 cut(s) 445, 1123, 1303, 1549
BseRI GAGGAG 3 cut(s) 36, 1448, 1506
BseSI GKGCMC 2 cut(s) 1122, 1356
BseXI GCAGC 5 cut(s) 307, 394, 1659, 1876, 1909
BseYI CCCAGC 2 cut(s) 955, 1320
BsgI GTGCAG 1 cut(s) 844
BshFI GGCC 4 cut(s) 144, 788, 1319, 1407
BshNI GGYRCC 1 cut(s) 1503
BshTI ACCGGT 1 cut(s) 1426
BshVI ATCGAT 1 cut(s) 123
BsiHKAI GWGCWC 2 cut(s) 1122, 1640
BsiSI CCGG 3 cut(s) 96, 980, 1427
BslFI GGGAC 2 cut(s) 172, 1043
BsmAI GTCTC 4 cut(s) 277, 996, 1003, 1054
BsmBI CGTCTC 1 cut(s) 277
BsmFI GGGAC 2 cut(s) 172, 1043
BsmI GAATGC 1 cut(s) 1444
BsnI GGCC 4 cut(s) 144, 788, 1319, 1407
Bso31I GGTCTC 1 cut(s) 996
Bsp1286I GDGCHC 4 cut(s) 1098, 1122, 1356, 1640
Bsp143I GATC 8 cut(s) 76, 538, 652, 803, 1070, 1193, 1444, 1801
BspACI CCGC 5 cut(s) 234, 666, 719, 810, 1442
BspANI GGCC 4 cut(s) 144, 788, 1319, 1407
BspCNI CTCAG 6 cut(s) 191, 718, 1006, 1120, 1162, 1166
BspDI ATCGAT 1 cut(s) 123
BspHI TCATGA 1 cut(s) 1632
BspLI GGNNCC 7 cut(s) 900, 1095, 1179, 1425, 1446, 1505, 1607
BspMI ACCTGC 1 cut(s) 1877
BspPI GGATC 3 cut(s) 798, 1439, 1452
BspQI GCTCTTC 2 cut(s) 206, 504
BspT107I GGYRCC 1 cut(s) 1503
BspTI CTTAAG 1 cut(s) 1184
BspTNI GGTCTC 1 cut(s) 996
BsrDI GCAATG 1 cut(s) 1792
BsrFI RCCGGY 1 cut(s) 1426
BsrI ACTGG 4 cut(s) 445, 1123, 1303, 1549
BssAI RCCGGY 1 cut(s) 1426
BssECI CCNNGG 4 cut(s) 789, 910, 978, 1745
BssMI GATC 8 cut(s) 76, 538, 652, 803, 1070, 1193, 1444, 1801
BssNI GRCGYC 1 cut(s) 1504
BssT1I CCWWGG 1 cut(s) 789
Bst2UI CCWGG 5 cut(s) 681, 912, 1136, 1376, 1519
Bst4CI ACNGT 6 cut(s) 415, 458, 506, 1037, 1666, 1852
Bst6I CTCTTC 4 cut(s) 22, 206, 504, 1711
BstACI GRCGYC 1 cut(s) 1504
BstAFI CTTAAG 1 cut(s) 1184
BstBAI YACGTR 1 cut(s) 210
BstC8I GCNNGC 6 cut(s) 446, 516, 1409, 1652, 1783, 1836
BstDSI CCRYGG 1 cut(s) 1745
BstF5I GGATG 2 cut(s) 1396, 1741
BstH2I RGCGCY 1 cut(s) 1507
BstHHI GCGC 1 cut(s) 1506
BstKTI GATC 8 cut(s) 79, 541, 655, 806, 1073, 1196, 1447, 1804
BstMAI GTCTC 4 cut(s) 277, 996, 1003, 1054
BstMBI GATC 8 cut(s) 76, 538, 652, 803, 1070, 1193, 1444, 1801
BstMWI GCNNNNNNNGC 5 cut(s) 317, 359, 1557, 1644, 1922
BstNI CCWGG 5 cut(s) 681, 912, 1136, 1376, 1519
BstNSI RCATGY 2 cut(s) 518, 638
BstSCI CCNGG 6 cut(s) 679, 910, 978, 1134, 1374, 1517
BstSFI CTRYAG 1 cut(s) 1842
BstSLI GKGCMC 2 cut(s) 1122, 1356
BstV1I GCAGC 5 cut(s) 307, 394, 1659, 1876, 1909
BstV2I GAAGAC 2 cut(s) 78, 738
BstX2I RGATCY 4 cut(s) 803, 1070, 1444, 1801
BstYI RGATCY 4 cut(s) 803, 1070, 1444, 1801
Bsu15I ATCGAT 1 cut(s) 123
BsuRI GGCC 4 cut(s) 144, 788, 1319, 1407
BsuTUI ATCGAT 1 cut(s) 123
BtgI CCRYGG 1 cut(s) 1745
BtsCI GGATG 2 cut(s) 1396, 1741
BtsI GCAGTG 1 cut(s) 972
BtsIMutI CAGTG 4 cut(s) 972, 1042, 1051, 1848
BveI ACCTGC 1 cut(s) 1877
Cac8I GCNNGC 6 cut(s) 446, 516, 1409, 1652, 1783, 1836
CaiI CAGNNNCTG 1 cut(s) 1850
CciI TCATGA 1 cut(s) 1632
CfoI GCGC 1 cut(s) 1506
Cfr10I RCCGGY 1 cut(s) 1426
Cfr13I GGNCC 3 cut(s) 839, 1132, 1318
ClaI ATCGAT 1 cut(s) 123
CseI GACGC 1 cut(s) 100
Csp6I GTAC 1 cut(s) 1752
CspAI ACCGGT 1 cut(s) 1426
CviAII CATG 8 cut(s) 515, 563, 635, 767, 987, 1005, 1254, 1633
CviQI GTAC 1 cut(s) 1752
DinI GGCGCC 1 cut(s) 1505
DpnI GATC 8 cut(s) 78, 540, 654, 805, 1072, 1195, 1446, 1803
DpnII GATC 8 cut(s) 76, 538, 652, 803, 1070, 1193, 1444, 1801
DriI GACNNNNNGTC 1 cut(s) 1016
Eam1104I CTCTTC 4 cut(s) 22, 206, 504, 1711
Eam1105I GACNNNNNGTC 1 cut(s) 1016
EarI CTCTTC 4 cut(s) 22, 206, 504, 1711
EciI GGCGGA 1 cut(s) 655
Ecl136II GAGCTC 1 cut(s) 1638
Eco130I CCWWGG 1 cut(s) 789
Eco24I GRGCYC 2 cut(s) 1098, 1640
Eco31I GGTCTC 1 cut(s) 996
Eco32I GATATC 1 cut(s) 907
Eco47I GGWCC 2 cut(s) 839, 1132
Eco53kI GAGCTC 1 cut(s) 1638
Eco57I CTGAAG 2 cut(s) 263, 735
EcoICRI GAGCTC 1 cut(s) 1638
EcoO109I RGGNCCY 1 cut(s) 1132
EcoRII CCWGG 5 cut(s) 679, 910, 1134, 1374, 1517
EcoRV GATATC 1 cut(s) 907
EcoT14I CCWWGG 1 cut(s) 789
EcoT38I GRGCYC 2 cut(s) 1098, 1640
EgeI GGCGCC 1 cut(s) 1505
EheI GGCGCC 1 cut(s) 1505
ErhI CCWWGG 1 cut(s) 789
Esp3I CGTCTC 1 cut(s) 277
FaeI CATG 8 cut(s) 518, 566, 638, 770, 990, 1008, 1257, 1636
FalI AAGNNNNNCTT 2 cut(s) 1876, 1908
FaqI GGGAC 2 cut(s) 172, 1043
FatI CATG 8 cut(s) 514, 562, 634, 766, 986, 1004, 1253, 1632
FauI CCCGC 1 cut(s) 227
FauNDI CATATG 1 cut(s) 1231
FbaI TGATCA 2 cut(s) 538, 652
FblI GTMKAC 2 cut(s) 114, 162
Fnu4HI GCNGC 5 cut(s) 321, 383, 1648, 1890, 1923
FokI GGATG 2 cut(s) 1403, 1748
FriOI GRGCYC 2 cut(s) 1098, 1640
Fsp4HI GCNGC 5 cut(s) 321, 383, 1648, 1890, 1923
FspBI CTAG 2 cut(s) 1080, 1692
GlaI GCGC 1 cut(s) 1505
GluI GCNGC 5 cut(s) 321, 383, 1648, 1890, 1923
GsaI CCCAGC 2 cut(s) 959, 1324
GsuI CTGGAG 1 cut(s) 1782
HaeII RGCGCY 1 cut(s) 1507
HaeIII GGCC 4 cut(s) 144, 788, 1319, 1407
HapII CCGG 3 cut(s) 96, 980, 1427
HgaI GACGC 1 cut(s) 100
HhaI GCGC 1 cut(s) 1506
Hin1I GRCGYC 1 cut(s) 1504
Hin1II CATG 8 cut(s) 518, 566, 638, 770, 990, 1008, 1257, 1636
Hin6I GCGC 1 cut(s) 1504
HinP1I GCGC 1 cut(s) 1504
HincII GTYRAC 4 cut(s) 115, 163, 686, 1855
HindII GTYRAC 4 cut(s) 115, 163, 686, 1855
HindIII AAGCTT 1 cut(s) 420
HinfI GANTC 6 cut(s) 120, 926, 1226, 1235, 1700, 1765
HpaII CCGG 3 cut(s) 96, 980, 1427
HphI GGTGA 2 cut(s) 85, 1709
Hpy166II GTNNAC 8 cut(s) 93, 115, 163, 686, 764, 1120, 1742, 1855
Hpy188III TCNNGA 5 cut(s) 536, 1262, 1633, 1799, 1938
Hpy8I GTNNAC 8 cut(s) 93, 115, 163, 686, 764, 1120, 1742, 1855
Hpy99I CGWCG 3 cut(s) 116, 119, 164
HpyAV CCTTC 7 cut(s) 223, 489, 500, 540, 875, 1260, 1397
HpyCH4III ACNGT 6 cut(s) 415, 458, 506, 1037, 1666, 1852
HpyCH4IV ACGT 3 cut(s) 159, 209, 466
HpyCH4V TGCA 4 cut(s) 82, 825, 1120, 1463
HpyF10VI GCNNNNNNNGC 5 cut(s) 317, 359, 1557, 1644, 1922
HpySE526I ACGT 3 cut(s) 159, 209, 466
Hsp92I GRCGYC 1 cut(s) 1504
Hsp92II CATG 8 cut(s) 518, 566, 638, 770, 990, 1008, 1257, 1636
HspAI GCGC 1 cut(s) 1504
KasI GGCGCC 1 cut(s) 1503
Ksp22I TGATCA 2 cut(s) 538, 652
Kzo9I GATC 8 cut(s) 76, 538, 652, 803, 1070, 1193, 1444, 1801
LguI GCTCTTC 2 cut(s) 206, 504
LmnI GCTCC 5 cut(s) 252, 898, 1093, 1493, 1801
Lsp1109I GCAGC 5 cut(s) 307, 394, 1659, 1876, 1909
LweI GCATC 3 cut(s) 637, 1267, 1847
MaeI CTAG 2 cut(s) 1080, 1692
MaeII ACGT 3 cut(s) 159, 209, 466
MaeIII GTNAC 5 cut(s) 64, 500, 1082, 1306, 1935
MalI GATC 8 cut(s) 78, 540, 654, 805, 1072, 1195, 1446, 1803
MboI GATC 8 cut(s) 76, 538, 652, 803, 1070, 1193, 1444, 1801
MfeI CAATTG 2 cut(s) 1280, 1526
MflI RGATCY 4 cut(s) 803, 1070, 1444, 1801
MhlI GDGCHC 4 cut(s) 1098, 1122, 1356, 1640
Mly113I GGCGCC 1 cut(s) 1504
MlyI GAGTC 2 cut(s) 1220, 1244
MmeI TCCRAC 3 cut(s) 82, 487, 988
MseI TTAA 6 cut(s) 330, 747, 834, 1185, 1533, 1898
MslI CAYNNNNRTG 2 cut(s) 498, 820
MspA1I CMGCKG 2 cut(s) 810, 1580
MspCI CTTAAG 1 cut(s) 1184
MspI CCGG 3 cut(s) 96, 980, 1427
MspR9I CCNGG 6 cut(s) 681, 912, 980, 1136, 1376, 1519
MunI CAATTG 2 cut(s) 1280, 1526
Mva1269I GAATGC 1 cut(s) 1444
MvaI CCWGG 5 cut(s) 681, 912, 1136, 1376, 1519
MwoI GCNNNNNNNGC 5 cut(s) 317, 359, 1557, 1644, 1922
NarI GGCGCC 1 cut(s) 1504
NciI CCSGG 1 cut(s) 980
NdeI CATATG 1 cut(s) 1231
NdeII GATC 8 cut(s) 76, 538, 652, 803, 1070, 1193, 1444, 1801
NlaIII CATG 8 cut(s) 518, 566, 638, 770, 990, 1008, 1257, 1636
NlaIV GGNNCC 7 cut(s) 900, 1095, 1179, 1425, 1446, 1505, 1607
NmuCI GTSAC 4 cut(s) 64, 500, 1082, 1935
NspI RCATGY 2 cut(s) 518, 638
OliI CACNNNNGTG 1 cut(s) 820
PaeI GCATGC 1 cut(s) 518
PagI TCATGA 1 cut(s) 1632
PciI ACATGT 1 cut(s) 634
PciSI GCTCTTC 2 cut(s) 206, 504
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 283
PctI GAATGC 1 cut(s) 1444
PfeI GAWTC 4 cut(s) 120, 926, 1700, 1765
PflMI CCANNNNNTGG 2 cut(s) 1331, 1381
PfoI TCCNGGA 1 cut(s) 1517
PinAI ACCGGT 1 cut(s) 1426
PkrI GCNGC 5 cut(s) 322, 384, 1649, 1891, 1924
PleI GAGTC 2 cut(s) 1220, 1243
PluTI GGCGCC 1 cut(s) 1507
PpsI GAGTC 2 cut(s) 1220, 1243
Ppu21I YACGTR 1 cut(s) 210
PpuMI RGGWCCY 1 cut(s) 1132
PscI ACATGT 1 cut(s) 634
PshBI ATTAAT 3 cut(s) 747, 834, 1533
Psp124BI GAGCTC 1 cut(s) 1640
Psp5II RGGWCCY 1 cut(s) 1132
Psp6I CCWGG 5 cut(s) 679, 910, 1134, 1374, 1517
PspFI CCCAGC 2 cut(s) 955, 1320
PspGI CCWGG 5 cut(s) 679, 910, 1134, 1374, 1517
PspN4I GGNNCC 7 cut(s) 900, 1095, 1179, 1425, 1446, 1505, 1607
PspPI GGNCC 3 cut(s) 839, 1132, 1318
PspPPI RGGWCCY 1 cut(s) 1132
PstNI CAGNNNCTG 1 cut(s) 1850
PsuI RGATCY 4 cut(s) 803, 1070, 1444, 1801
PvuII CAGCTG 1 cut(s) 1580
RsaI GTAC 1 cut(s) 1753
RsaNI GTAC 1 cut(s) 1752
RseI CAYNNNNRTG 2 cut(s) 498, 820
SacI GAGCTC 1 cut(s) 1640
SalI GTCGAC 2 cut(s) 113, 161
SapI GCTCTTC 2 cut(s) 206, 504
SaqAI TTAA 6 cut(s) 330, 747, 834, 1185, 1533, 1898
SatI GCNGC 5 cut(s) 321, 383, 1648, 1890, 1923
Sau3AI GATC 8 cut(s) 76, 538, 652, 803, 1070, 1193, 1444, 1801
Sau96I GGNCC 3 cut(s) 839, 1132, 1318
ScaI AGTACT 1 cut(s) 1753
SchI GAGTC 2 cut(s) 1220, 1244
ScrFI CCNGG 6 cut(s) 681, 912, 980, 1136, 1376, 1519
SduI GDGCHC 4 cut(s) 1098, 1122, 1356, 1640
SfaNI GCATC 3 cut(s) 637, 1267, 1847
SfcI CTRYAG 1 cut(s) 1842
SfoI GGCGCC 1 cut(s) 1505
SgrDI CGTCGACG 1 cut(s) 113
SinI GGWCC 2 cut(s) 839, 1132
SmiMI CAYNNNNRTG 2 cut(s) 498, 820
SmlI CTYRAG 2 cut(s) 1184, 1655
SmoI CTYRAG 2 cut(s) 1184, 1655
SphI GCATGC 1 cut(s) 518
SsiI CCGC 5 cut(s) 234, 666, 719, 810, 1442
SspDI GGCGCC 1 cut(s) 1503
SspI AATATT 2 cut(s) 39, 751
SspMI CTAG 2 cut(s) 1080, 1692
SstI GAGCTC 1 cut(s) 1640
StyD4I CCNGG 6 cut(s) 679, 910, 978, 1134, 1374, 1517
StyI CCWWGG 1 cut(s) 789
TaaI ACNGT 6 cut(s) 415, 458, 506, 1037, 1666, 1852
TaiI ACGT 3 cut(s) 162, 212, 469
TaqI TCGA 3 cut(s) 114, 123, 162
TaqII GACCGA 1 cut(s) 1010
TatI WGTACW 1 cut(s) 1751
TfiI GAWTC 4 cut(s) 120, 926, 1700, 1765
Tru1I TTAA 6 cut(s) 330, 747, 834, 1185, 1533, 1898
Tru9I TTAA 6 cut(s) 330, 747, 834, 1185, 1533, 1898
TscAI CASTG 4 cut(s) 979, 1042, 1051, 1855
TseFI GTSAC 4 cut(s) 64, 500, 1082, 1935
TseI GCWGC 5 cut(s) 320, 382, 1647, 1889, 1922
Tsp45I GTSAC 4 cut(s) 64, 500, 1082, 1935
TspGWI ACGGA 3 cut(s) 83, 132, 1762
TspRI CASTG 4 cut(s) 979, 1042, 1051, 1855
Van91I CCANNNNNTGG 2 cut(s) 1331, 1381
Vha464I CTTAAG 1 cut(s) 1184
VneI GTGCAC 1 cut(s) 1118
VpaK11BI GGWCC 2 cut(s) 839, 1132
VspI ATTAAT 3 cut(s) 747, 834, 1533
XceI RCATGY 2 cut(s) 518, 638
XcmI CCANNNNNNNNNTGG 1 cut(s) 1328
XmiI GTMKAC 2 cut(s) 114, 162
XspI CTAG 2 cut(s) 1080, 1692
ZrmI AGTACT 1 cut(s) 1753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.