Rw4G000810

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0008400
Physical Location & Seq
Forward (+)
1584257 .. 1586542
2286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G000810.1

Sequence Viewer

Length: 1974 bp
ATGGAAGTGGAACAAGGAGGAGGAAGAGAGCGAATATTCGTTGGGGGTTTGGGAGAGAGCGTGACGGAAGACGATCTGCAAAGGCTGTTCACCGGAGTTGGAGGAAGCGTCGACGGAATCGATATAATCAGAACCAAAGGCCGCAGCTTTGCTTACGTCGACTTTCTGCCTTGCTCAGACAAGTCCCTCTCCAAGCTCTTCGCCACGTATAATGGGTGCGTTTGGAAGGGCGGGAAGCTGAAGCTCCACAAGGCTAAAGAACATTATCTTGTTCGTTTGAGACGAGAATGGGCTGAACAAGAAAATGCTCATCTTGCTGCTCAAATTAAGCACCACACCACCCAAGAAGCTAAAACTGCTTCACATCACAGCACCAAGCAGCTTCGCTTATTCTTTCCTGCTCTAAGAACCGTGAAAGCTTTGCCCTTTAGTGGAACTGGCAAGCACAAATACAGTTTCCAACGTGTTCAAGCTCCTTCTCTCCCCCTTCATTTCTGTGACTGTGAAGAGCATGCTGTTTTTGACCCTTCTCCTGATCAACAAAACCAATTACCTGACCATGTGATCAATGACAAAGAGCTTAGTATAATGAATAAAGTAATGGACAAGCTCTTACAAAAGGAATTGGAACATGTTTCTGATGATGCTGATCACAATGCTACCGCCTCCCCTCTGCCTCGGCCTCTGCCTAGTCAACAACATGGTGAGCTTTATCTTCCTACTGAAGCGGAAGCTGAGGAAGACGACCTCATAATTAATATTGTGTCAAGTAAACATGAAGAAAACATACTATCGGCCTTGGAGGAATTGAGATCCAGCGGAACACAGGTGTGCAGTAAGATTAATGGACCTCCTAACAAAAAGAGGAAATCCCTTCTCAACAAGAATTACAATGAAATAGAATTGGAGCCTGATATCCCTGGCTCAAAGACGGATTCTAAATCTCAACCAGATAAACCAGAGCTGGGCGTCCAACAATCAACTGCCCCGGTTTCATGGTCTCAGAAATGTTCATGGAGACAACTTGTCGGTCATAGGGACAACAGTGGGTTCAGTGTCTCACATATACTGACAGGCAGATCTTCTTCTAGTGACCAAATGGAGCCCAAATCTGGCAGTTCCGATATGCACCAGTCTGAGGACCTGGCAAGTGACGGAAACTCAGAAGGCCAGCTGTCTGAGATGGAACCACTTAAGGGAAGATCAGAACATAAACCTACCAAGTCAGTATCTGACTCATATGAGTCGGGTAGAGTTCCTTCATGGCATCAGGAATTATCTCTGACACAATTGACTGATGAGAATACTGGGAGTGTAACTGAACAGGCCCAGCCAAACTCTGGTTCTGGTGCTTTTGAAGTGCCCCATTCTGACAGCAAAAACCAGGACTTGGCAAGGGATGGAAACTTGGAAGGTCAGCTCTGTGAGATGGAACCGGTGGAGGAGAATGCGGATCCTCAACCTCAAAATGCACTATCAAACTCAACTAAGTCAGGTAGAGGAGCTTCATGGCGCCAGAAATCGTCCTGGACACAATTGATTAATAACAATACTGGAAGCTCATTCAGCATAACACAAGTTCTACCAGCTGGTATCTCTTTCAAGCAACAAGGGTTCCAAAAGCCTAGAGGTGTAGAAGTCATGAGCTCTTTTGGTAGCAAGCTCAAGGAAATAGTAAAGCAAGATAAGAATAAACTTACTAGAGGTGAATCCTCTTCTTTGGGGATAATTGGAAAGGAGGGGAATGGTTTACCACGGAGTACTCCTAAAGAGAATCAACAGATTATCGCAGGCAATGACAATGCTCCAGATCTGGGGAAAATATGTGATTTGACACCAAAGCAAGCATCTACAGGCACTGTTGACAAAGGAAAAACCTGCTTATTTGTGAGAAGTGCTGCTTCATTAAATGAATGGGCGAAAGCTAAGGCTGCCCTAAGTGGGTCACGAAAAAGAAAGAACAGCAACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

657

Amino Acids

72.13

Weight (kDa)

6.51

Isoelectric Point (pI)

45.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 12 - 55 6.5e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1886
AccB1I GGYRCC 1 cut(s) 1512
AccB7I CCANNNNNTGG 2 cut(s) 1340, 1390
AccI GTMKAC 2 cut(s) 111, 159
AciI CCGC 6 cut(s) 142, 231, 663, 728, 819, 1451
AclWI GGATC 3 cut(s) 807, 1448, 1461
AcuI CTGAAG 2 cut(s) 260, 744
AcyI GRCGYC 2 cut(s) 969, 1513
AfaI GTAC 1 cut(s) 1762
AfiI CCNNNNNNNGG 9 cut(s) 431, 965, 1112, 1138, 1196, 1340, 1390, 1814, 1941
AflII CTTAAG 1 cut(s) 1193
AflIII ACRYGT 2 cut(s) 463, 631
AgeI ACCGGT 1 cut(s) 1435
AgsI TTSAA 3 cut(s) 470, 1358, 1603
AhdI GACNNNNNGTC 1 cut(s) 1025
AjnI CCWGG 4 cut(s) 919, 1143, 1383, 1526
AjuI GAANNNNNNNTTGG 2 cut(s) 1327, 1359
AleI CACNNNNGTG 1 cut(s) 829
Alw21I GWGCWC 1 cut(s) 1649
Alw26I GTCTC 4 cut(s) 274, 1005, 1012, 1063
AlwI GGATC 3 cut(s) 807, 1448, 1461
AlwNI CAGNNNCTG 2 cut(s) 1232, 1859
AoxI GGCC 5 cut(s) 139, 680, 795, 1168, 1326
ApeKI GCWGC 5 cut(s) 144, 317, 379, 1898, 1931
AseI ATTAAT 3 cut(s) 756, 843, 1542
AsiGI ACCGGT 1 cut(s) 1435
AspLEI GCGC 1 cut(s) 1515
AspS9I GGNCC 3 cut(s) 848, 1141, 1327
AsuC2I CCSGG 1 cut(s) 989
AsuHPI GGTGA 3 cut(s) 82, 716, 1718
AvaII GGWCC 2 cut(s) 848, 1141
BaeGI GKGCMC 1 cut(s) 1365
BamHI GGATCC 1 cut(s) 1453
BanI GGYRCC 1 cut(s) 1512
BanII GRGCYC 2 cut(s) 1107, 1649
BarI GAAGNNNNNNTAC 6 cut(s) 771, 803, 1243, 1275, 1489, 1521
BbsI GAAGAC 2 cut(s) 75, 747
Bbv12I GWGCWC 1 cut(s) 1649
BbvCI CCTCAGC 1 cut(s) 735
BbvI GCAGC 5 cut(s) 156, 304, 391, 1885, 1918
BccI CCATC 3 cut(s) 1177, 1394, 1423
BciT130I CCWGG 4 cut(s) 921, 1145, 1385, 1528
BclI TGATCA 3 cut(s) 535, 564, 649
BcnI CCSGG 1 cut(s) 989
BcoDI GTCTC 4 cut(s) 274, 1005, 1012, 1063
BfaI CTAG 4 cut(s) 690, 1089, 1626, 1701
BfmI CTRYAG 1 cut(s) 1851
BfoI RGCGCY 1 cut(s) 1516
BfrI CTTAAG 1 cut(s) 1193
BfuAI ACCTGC 1 cut(s) 1886
BglII AGATCT 2 cut(s) 1079, 1810
BisI GCNGC 6 cut(s) 142, 145, 318, 380, 1899, 1932
BlsI GCNGC 6 cut(s) 143, 146, 319, 381, 1900, 1933
BmcAI AGTACT 1 cut(s) 1762
Bme1390I CCNGG 5 cut(s) 921, 989, 1145, 1385, 1528
Bme18I GGWCC 2 cut(s) 848, 1141
BmeRI GACNNNNNGTC 1 cut(s) 1025
BmgT120I GGNCC 3 cut(s) 848, 1141, 1327
BmiI GGNNCC 7 cut(s) 909, 1104, 1188, 1434, 1455, 1514, 1616
BmrFI CCNGG 5 cut(s) 921, 989, 1145, 1385, 1528
BmrI ACTGGG 1 cut(s) 1317
BmsI GCATC 3 cut(s) 634, 1276, 1856
BmuI ACTGGG 1 cut(s) 1317
BpiI GAAGAC 2 cut(s) 75, 747
BpmI CTGGAG 1 cut(s) 1791
Bpu10I CCTNAGC 2 cut(s) 735, 1926
BpuEI CTTGAG 1 cut(s) 1649
BpuMI CCSGG 1 cut(s) 989
Bsa29I ATCGAT 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 207
BsaBI GATNNNNATC 1 cut(s) 648
BsaHI GRCGYC 2 cut(s) 969, 1513
BsaI GGTCTC 1 cut(s) 1005
BsaJI CCNNGG 5 cut(s) 677, 798, 919, 987, 1754
BsaWI WCCGGW 2 cut(s) 92, 1435
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 93, 123
Bsc4I CCNNNNNNNGG 9 cut(s) 431, 965, 1112, 1138, 1196, 1340, 1390, 1814, 1941
Bse118I RCCGGY 1 cut(s) 1435
Bse1I ACTGG 4 cut(s) 442, 1132, 1312, 1558
Bse3DI GCAATG 1 cut(s) 1801
Bse8I GATNNNNATC 1 cut(s) 648
BseBI CCWGG 4 cut(s) 921, 1145, 1385, 1528
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 5 cut(s) 677, 798, 919, 987, 1754
BseGI GGATG 1 cut(s) 1405
BseJI GATNNNNATC 1 cut(s) 648
BseLI CCNNNNNNNGG 9 cut(s) 431, 965, 1112, 1138, 1196, 1340, 1390, 1814, 1941
BseMI GCAATG 1 cut(s) 1801
BseMII CTCAG 6 cut(s) 189, 726, 1016, 1128, 1170, 1176
BseNI ACTGG 4 cut(s) 442, 1132, 1312, 1558
BseRI GAGGAG 3 cut(s) 33, 1457, 1515
BseSI GKGCMC 1 cut(s) 1365
BseXI GCAGC 5 cut(s) 156, 304, 391, 1885, 1918
BseYI CCCAGC 2 cut(s) 964, 1329
BsgI GTGCAG 1 cut(s) 853
BshFI GGCC 5 cut(s) 141, 682, 797, 1170, 1328
BshNI GGYRCC 1 cut(s) 1512
BshTI ACCGGT 1 cut(s) 1435
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 1 cut(s) 1649
BsiSI CCGG 3 cut(s) 93, 989, 1436
BslFI GGGAC 2 cut(s) 169, 1052
BslI CCNNNNNNNGG 9 cut(s) 431, 965, 1112, 1138, 1196, 1340, 1390, 1814, 1941
BsmAI GTCTC 4 cut(s) 274, 1005, 1012, 1063
BsmBI CGTCTC 1 cut(s) 274
BsmFI GGGAC 2 cut(s) 169, 1052
BsmI GAATGC 1 cut(s) 1453
BsnI GGCC 5 cut(s) 141, 682, 797, 1170, 1328
Bso31I GGTCTC 1 cut(s) 1005
Bsp1286I GDGCHC 3 cut(s) 1107, 1365, 1649
Bsp143I GATC 9 cut(s) 73, 535, 564, 649, 812, 1079, 1202, 1453, 1810
BspACI CCGC 6 cut(s) 142, 231, 663, 728, 819, 1451
BspANI GGCC 5 cut(s) 141, 682, 797, 1170, 1328
BspCNI CTCAG 6 cut(s) 188, 727, 1015, 1129, 1171, 1175
BspDI ATCGAT 1 cut(s) 120
BspHI TCATGA 1 cut(s) 1641
BspLI GGNNCC 7 cut(s) 909, 1104, 1188, 1434, 1455, 1514, 1616
BspMI ACCTGC 1 cut(s) 1886
BspPI GGATC 3 cut(s) 807, 1448, 1461
BspQI GCTCTTC 2 cut(s) 203, 501
BspT107I GGYRCC 1 cut(s) 1512
BspTI CTTAAG 1 cut(s) 1193
BspTNI GGTCTC 1 cut(s) 1005
BsrDI GCAATG 1 cut(s) 1801
BsrFI RCCGGY 1 cut(s) 1435
BsrI ACTGG 4 cut(s) 442, 1132, 1312, 1558
BssAI RCCGGY 1 cut(s) 1435
BssECI CCNNGG 5 cut(s) 677, 798, 919, 987, 1754
BssMI GATC 9 cut(s) 73, 535, 564, 649, 812, 1079, 1202, 1453, 1810
BssNI GRCGYC 2 cut(s) 969, 1513
BssT1I CCWWGG 1 cut(s) 798
Bst2UI CCWGG 4 cut(s) 921, 1145, 1385, 1528
Bst4CI ACNGT 5 cut(s) 412, 455, 503, 1046, 1861
Bst6I CTCTTC 4 cut(s) 19, 203, 501, 1720
BstACI GRCGYC 2 cut(s) 969, 1513
BstAFI CTTAAG 1 cut(s) 1193
BstBAI YACGTR 1 cut(s) 207
BstC8I GCNNGC 6 cut(s) 443, 513, 1172, 1661, 1792, 1845
BstDSI CCRYGG 1 cut(s) 1754
BstF5I GGATG 1 cut(s) 1405
BstH2I RGCGCY 1 cut(s) 1516
BstHHI GCGC 1 cut(s) 1515
BstKTI GATC 9 cut(s) 76, 538, 567, 652, 815, 1082, 1205, 1456, 1813
BstMAI GTCTC 4 cut(s) 274, 1005, 1012, 1063
BstMBI GATC 9 cut(s) 73, 535, 564, 649, 812, 1079, 1202, 1453, 1810
BstMWI GCNNNNNNNGC 4 cut(s) 314, 356, 1566, 1931
BstNI CCWGG 4 cut(s) 921, 1145, 1385, 1528
BstNSI RCATGY 2 cut(s) 515, 635
BstSCI CCNGG 5 cut(s) 919, 987, 1143, 1383, 1526
BstSFI CTRYAG 1 cut(s) 1851
BstSLI GKGCMC 1 cut(s) 1365
BstV1I GCAGC 5 cut(s) 156, 304, 391, 1885, 1918
BstV2I GAAGAC 2 cut(s) 75, 747
BstX2I RGATCY 4 cut(s) 812, 1079, 1453, 1810
BstYI RGATCY 4 cut(s) 812, 1079, 1453, 1810
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 5 cut(s) 141, 682, 797, 1170, 1328
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 1 cut(s) 1754
BtsCI GGATG 1 cut(s) 1405
BtsIMutI CAGTG 3 cut(s) 1051, 1060, 1857
BveI ACCTGC 1 cut(s) 1886
Cac8I GCNNGC 6 cut(s) 443, 513, 1172, 1661, 1792, 1845
CaiI CAGNNNCTG 2 cut(s) 1232, 1859
CciI TCATGA 1 cut(s) 1641
CfoI GCGC 1 cut(s) 1515
Cfr10I RCCGGY 1 cut(s) 1435
Cfr13I GGNCC 3 cut(s) 848, 1141, 1327
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 2 cut(s) 97, 958
Csp6I GTAC 1 cut(s) 1761
CspAI ACCGGT 1 cut(s) 1435
CviQI GTAC 1 cut(s) 1761
DinI GGCGCC 1 cut(s) 1514
DpnI GATC 9 cut(s) 75, 537, 566, 651, 814, 1081, 1204, 1455, 1812
DpnII GATC 9 cut(s) 73, 535, 564, 649, 812, 1079, 1202, 1453, 1810
DriI GACNNNNNGTC 1 cut(s) 1025
Eam1104I CTCTTC 4 cut(s) 19, 203, 501, 1720
Eam1105I GACNNNNNGTC 1 cut(s) 1025
EarI CTCTTC 4 cut(s) 19, 203, 501, 1720
Ecl136II GAGCTC 1 cut(s) 1647
Eco130I CCWWGG 1 cut(s) 798
Eco24I GRGCYC 2 cut(s) 1107, 1649
Eco31I GGTCTC 1 cut(s) 1005
Eco32I GATATC 1 cut(s) 916
Eco47I GGWCC 2 cut(s) 848, 1141
Eco53kI GAGCTC 1 cut(s) 1647
Eco57I CTGAAG 2 cut(s) 260, 744
EcoICRI GAGCTC 1 cut(s) 1647
EcoO109I RGGNCCY 1 cut(s) 1141
EcoRII CCWGG 4 cut(s) 919, 1143, 1383, 1526
EcoRV GATATC 1 cut(s) 916
EcoT14I CCWWGG 1 cut(s) 798
EcoT38I GRGCYC 2 cut(s) 1107, 1649
EgeI GGCGCC 1 cut(s) 1514
EheI GGCGCC 1 cut(s) 1514
ErhI CCWWGG 1 cut(s) 798
Esp3I CGTCTC 1 cut(s) 274
FalI AAGNNNNNCTT 2 cut(s) 1885, 1917
FaqI GGGAC 2 cut(s) 169, 1052
FauI CCCGC 1 cut(s) 224
FauNDI CATATG 1 cut(s) 1240
FbaI TGATCA 3 cut(s) 535, 564, 649
FblI GTMKAC 2 cut(s) 111, 159
Fnu4HI GCNGC 6 cut(s) 142, 145, 318, 380, 1899, 1932
FokI GGATG 1 cut(s) 1412
FriOI GRGCYC 2 cut(s) 1107, 1649
Fsp4HI GCNGC 6 cut(s) 142, 145, 318, 380, 1899, 1932
FspBI CTAG 4 cut(s) 690, 1089, 1626, 1701
GlaI GCGC 1 cut(s) 1514
GluI GCNGC 6 cut(s) 142, 145, 318, 380, 1899, 1932
GsaI CCCAGC 2 cut(s) 968, 1333
GsuI CTGGAG 1 cut(s) 1791
HaeII RGCGCY 1 cut(s) 1516
HaeIII GGCC 5 cut(s) 141, 682, 797, 1170, 1328
HapII CCGG 3 cut(s) 93, 989, 1436
HgaI GACGC 2 cut(s) 97, 958
HhaI GCGC 1 cut(s) 1515
Hin1I GRCGYC 2 cut(s) 969, 1513
Hin6I GCGC 1 cut(s) 1513
HinP1I GCGC 1 cut(s) 1513
HincII GTYRAC 4 cut(s) 112, 160, 695, 1864
HindII GTYRAC 4 cut(s) 112, 160, 695, 1864
HindIII AAGCTT 1 cut(s) 417
HinfI GANTC 6 cut(s) 117, 935, 1235, 1244, 1709, 1774
HpaII CCGG 3 cut(s) 93, 989, 1436
HphI GGTGA 3 cut(s) 82, 716, 1718
Hpy166II GTNNAC 7 cut(s) 90, 112, 160, 695, 773, 1751, 1864
Hpy188III TCNNGA 5 cut(s) 533, 1271, 1642, 1808, 1947
Hpy8I GTNNAC 7 cut(s) 90, 112, 160, 695, 773, 1751, 1864
Hpy99I CGWCG 3 cut(s) 113, 116, 161
HpyAV CCTTC 8 cut(s) 220, 486, 497, 537, 884, 1160, 1269, 1406
HpyCH4III ACNGT 5 cut(s) 412, 455, 503, 1046, 1861
HpyCH4IV ACGT 3 cut(s) 156, 206, 463
HpyCH4V TGCA 4 cut(s) 79, 834, 1129, 1472
HpyF10VI GCNNNNNNNGC 4 cut(s) 314, 356, 1566, 1931
HpySE526I ACGT 3 cut(s) 156, 206, 463
Hsp92I GRCGYC 2 cut(s) 969, 1513
HspAI GCGC 1 cut(s) 1513
KasI GGCGCC 1 cut(s) 1512
Ksp22I TGATCA 3 cut(s) 535, 564, 649
Kzo9I GATC 9 cut(s) 73, 535, 564, 649, 812, 1079, 1202, 1453, 1810
LguI GCTCTTC 2 cut(s) 203, 501
LmnI GCTCC 6 cut(s) 249, 478, 907, 1102, 1502, 1810
Lsp1109I GCAGC 5 cut(s) 156, 304, 391, 1885, 1918
LweI GCATC 3 cut(s) 634, 1276, 1856
MaeI CTAG 4 cut(s) 690, 1089, 1626, 1701
MaeII ACGT 3 cut(s) 156, 206, 463
MaeIII GTNAC 6 cut(s) 61, 497, 1091, 1151, 1315, 1944
MalI GATC 9 cut(s) 75, 537, 566, 651, 814, 1081, 1204, 1455, 1812
MboI GATC 9 cut(s) 73, 535, 564, 649, 812, 1079, 1202, 1453, 1810
MfeI CAATTG 2 cut(s) 1289, 1535
MflI RGATCY 4 cut(s) 812, 1079, 1453, 1810
MhlI GDGCHC 3 cut(s) 1107, 1365, 1649
Mly113I GGCGCC 1 cut(s) 1513
MlyI GAGTC 2 cut(s) 1229, 1253
MmeI TCCRAC 3 cut(s) 79, 484, 997
MseI TTAA 6 cut(s) 327, 756, 843, 1194, 1542, 1907
MslI CAYNNNNRTG 2 cut(s) 495, 829
MspA1I CMGCKG 3 cut(s) 819, 1174, 1589
MspCI CTTAAG 1 cut(s) 1193
MspI CCGG 3 cut(s) 93, 989, 1436
MspR9I CCNGG 5 cut(s) 921, 989, 1145, 1385, 1528
MunI CAATTG 2 cut(s) 1289, 1535
Mva1269I GAATGC 1 cut(s) 1453
MvaI CCWGG 4 cut(s) 921, 1145, 1385, 1528
MwoI GCNNNNNNNGC 4 cut(s) 314, 356, 1566, 1931
NarI GGCGCC 1 cut(s) 1513
NciI CCSGG 1 cut(s) 989
NdeI CATATG 1 cut(s) 1240
NdeII GATC 9 cut(s) 73, 535, 564, 649, 812, 1079, 1202, 1453, 1810
NlaIV GGNNCC 7 cut(s) 909, 1104, 1188, 1434, 1455, 1514, 1616
NmeAIII GCCGAG 1 cut(s) 658
NmuCI GTSAC 5 cut(s) 61, 497, 1091, 1151, 1944
NspI RCATGY 2 cut(s) 515, 635
OliI CACNNNNGTG 1 cut(s) 829
PaeI GCATGC 1 cut(s) 515
PagI TCATGA 1 cut(s) 1641
PciI ACATGT 1 cut(s) 631
PciSI GCTCTTC 2 cut(s) 203, 501
PcsI WCGNNNNNNNCGW 2 cut(s) 117, 280
PctI GAATGC 1 cut(s) 1453
PfeI GAWTC 4 cut(s) 117, 935, 1709, 1774
PflMI CCANNNNNTGG 2 cut(s) 1340, 1390
PfoI TCCNGGA 1 cut(s) 1526
PinAI ACCGGT 1 cut(s) 1435
PkrI GCNGC 6 cut(s) 143, 146, 319, 381, 1900, 1933
PleI GAGTC 2 cut(s) 1229, 1252
PluTI GGCGCC 1 cut(s) 1516
PpsI GAGTC 2 cut(s) 1229, 1252
Ppu21I YACGTR 1 cut(s) 207
PpuMI RGGWCCY 1 cut(s) 1141
PscI ACATGT 1 cut(s) 631
PshBI ATTAAT 3 cut(s) 756, 843, 1542
Psp124BI GAGCTC 1 cut(s) 1649
Psp5II RGGWCCY 1 cut(s) 1141
Psp6I CCWGG 4 cut(s) 919, 1143, 1383, 1526
PspFI CCCAGC 2 cut(s) 964, 1329
PspGI CCWGG 4 cut(s) 919, 1143, 1383, 1526
PspN4I GGNNCC 7 cut(s) 909, 1104, 1188, 1434, 1455, 1514, 1616
PspPI GGNCC 3 cut(s) 848, 1141, 1327
PspPPI RGGWCCY 1 cut(s) 1141
PstNI CAGNNNCTG 2 cut(s) 1232, 1859
PsuI RGATCY 4 cut(s) 812, 1079, 1453, 1810
PvuII CAGCTG 2 cut(s) 1174, 1589
RsaI GTAC 1 cut(s) 1762
RsaNI GTAC 1 cut(s) 1761
RseI CAYNNNNRTG 2 cut(s) 495, 829
SacI GAGCTC 1 cut(s) 1649
SalI GTCGAC 2 cut(s) 110, 158
SapI GCTCTTC 2 cut(s) 203, 501
SaqAI TTAA 6 cut(s) 327, 756, 843, 1194, 1542, 1907
SatI GCNGC 6 cut(s) 142, 145, 318, 380, 1899, 1932
Sau3AI GATC 9 cut(s) 73, 535, 564, 649, 812, 1079, 1202, 1453, 1810
Sau96I GGNCC 3 cut(s) 848, 1141, 1327
ScaI AGTACT 1 cut(s) 1762
SchI GAGTC 2 cut(s) 1229, 1253
ScrFI CCNGG 5 cut(s) 921, 989, 1145, 1385, 1528
SduI GDGCHC 3 cut(s) 1107, 1365, 1649
SfaNI GCATC 3 cut(s) 634, 1276, 1856
SfcI CTRYAG 1 cut(s) 1851
SfoI GGCGCC 1 cut(s) 1514
SgrDI CGTCGACG 1 cut(s) 110
SinI GGWCC 2 cut(s) 848, 1141
SmiMI CAYNNNNRTG 2 cut(s) 495, 829
SmlI CTYRAG 2 cut(s) 1193, 1664
SmoI CTYRAG 2 cut(s) 1193, 1664
SphI GCATGC 1 cut(s) 515
SsiI CCGC 6 cut(s) 142, 231, 663, 728, 819, 1451
SspDI GGCGCC 1 cut(s) 1512
SspI AATATT 2 cut(s) 36, 760
SspMI CTAG 4 cut(s) 690, 1089, 1626, 1701
SstI GAGCTC 1 cut(s) 1649
StyD4I CCNGG 5 cut(s) 919, 987, 1143, 1383, 1526
StyI CCWWGG 1 cut(s) 798
TaaI ACNGT 5 cut(s) 412, 455, 503, 1046, 1861
TaiI ACGT 3 cut(s) 159, 209, 466
TaqI TCGA 3 cut(s) 111, 120, 159
TaqII GACCGA 1 cut(s) 1019
TatI WGTACW 1 cut(s) 1760
TauI GCSGC 1 cut(s) 144
TfiI GAWTC 4 cut(s) 117, 935, 1709, 1774
Tru1I TTAA 6 cut(s) 327, 756, 843, 1194, 1542, 1907
Tru9I TTAA 6 cut(s) 327, 756, 843, 1194, 1542, 1907
TscAI CASTG 3 cut(s) 1051, 1060, 1864
TseFI GTSAC 5 cut(s) 61, 497, 1091, 1151, 1944
TseI GCWGC 5 cut(s) 144, 317, 379, 1898, 1931
Tsp45I GTSAC 5 cut(s) 61, 497, 1091, 1151, 1944
TspGWI ACGGA 5 cut(s) 80, 129, 947, 1170, 1771
TspRI CASTG 3 cut(s) 1051, 1060, 1864
Van91I CCANNNNNTGG 2 cut(s) 1340, 1390
Vha464I CTTAAG 1 cut(s) 1193
VpaK11BI GGWCC 2 cut(s) 848, 1141
VspI ATTAAT 3 cut(s) 756, 843, 1542
XceI RCATGY 2 cut(s) 515, 635
XcmI CCANNNNNNNNNTGG 1 cut(s) 1337
XmiI GTMKAC 2 cut(s) 111, 159
XspI CTAG 4 cut(s) 690, 1089, 1626, 1701
ZrmI AGTACT 1 cut(s) 1762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.