TBC1 domain family member
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G30710 |
| fragaria_vesca | FvH4_3g19760 FvH4_3g19760 FvH4_3g19760 FvH4_3g19760 FvH4_3g19760 |
| malus_domestica | MD03G1229700.v1.1 MD04G1046900.v1.1 MD11G1250200.v1.1 |
| prunus_persica | Prupe.1G201500_v2.0.a1 Prupe.1G201500_v2.0.a1 Prupe.1G201500_v2.0.a1 Prupe.1G201500_v2.0.a1 Prupe.1G201500_v2.0.a1 Prupe.4G179600_v2.0.a1 Prupe.4G179600_v2.0.a1 |
| pyrus_communis | pycom03g17730 pycom04g04070 |
| rosa_chinensis | RchiOBHm_Chr5g0033161 |
| rosa_laevigata | RLG00000033452 |
| rosa_multiflora | Rmu_sc0009377.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00046810 |
| rosa_rugosa | Rorug05G0137100 |
| rosa_samantha | Rh5AG228900 Rh5BG230000 Rh5DG234700 |
| rosa_wichuraiana | Rw5G020940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 924 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1255 |
| AccBSI | CCGCTC | 1 cut(s) | 742 |
| AccIII | TCCGGA | 1 cut(s) | 622 |
| AciI | CCGC | 5 cut(s) | 173, 742, 1021, 1087, 1138 |
| AclWI | GGATC | 2 cut(s) | 739, 752 |
| AcoI | YGGCCR | 1 cut(s) | 258 |
| AcsI | RAATTY | 4 cut(s) | 313, 328, 1067, 1244 |
| AcuI | CTGAAG | 1 cut(s) | 1182 |
| AcvI | CACGTG | 1 cut(s) | 1048 |
| AfaI | GTAC | 1 cut(s) | 397 |
| AfeI | AGCGCT | 1 cut(s) | 635 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 741, 779, 1143, 1144, 1255 |
| AflIII | ACRYGT | 1 cut(s) | 1045 |
| AgeI | ACCGGT | 1 cut(s) | 1033 |
| AgsI | TTSAA | 9 cut(s) | 84, 91, 113, 318, 1076, 1096, 1271, 1323, 1351 |
| AjnI | CCWGG | 1 cut(s) | 139 |
| AluBI | AGCT | 8 cut(s) | 222, 288, 368, 1003, 1231, 1240, 1356, 1377 |
| AluI | AGCT | 8 cut(s) | 222, 288, 368, 1003, 1231, 1240, 1356, 1377 |
| Alw21I | GWGCWC | 1 cut(s) | 290 |
| Alw26I | GTCTC | 1 cut(s) | 888 |
| AlwI | GGATC | 2 cut(s) | 739, 752 |
| Ama87I | CYCGRG | 1 cut(s) | 584 |
| Aor13HI | TCCGGA | 1 cut(s) | 622 |
| Aor51HI | AGCGCT | 1 cut(s) | 635 |
| AoxI | GGCC | 2 cut(s) | 258, 759 |
| ApoI | RAATTY | 4 cut(s) | 313, 328, 1067, 1244 |
| AsiGI | ACCGGT | 1 cut(s) | 1033 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1071 |
| AspLEI | GCGC | 2 cut(s) | 582, 636 |
| AspS9I | GGNCC | 1 cut(s) | 759 |
| AsuC2I | CCSGG | 1 cut(s) | 978 |
| AsuHPI | GGTGA | 2 cut(s) | 1126, 1289 |
| AvaI | CYCGRG | 1 cut(s) | 584 |
| BalI | TGGCCA | 1 cut(s) | 260 |
| BamHI | GGATCC | 1 cut(s) | 744 |
| BanI | GGYRCC | 1 cut(s) | 924 |
| BanII | GRGCYC | 1 cut(s) | 290 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 504, 536 |
| BbrPI | CACGTG | 1 cut(s) | 1048 |
| Bbv12I | GWGCWC | 1 cut(s) | 290 |
| BccI | CCATC | 1 cut(s) | 938 |
| BciT130I | CCWGG | 1 cut(s) | 141 |
| BciVI | GTATCC | 2 cut(s) | 712, 1141 |
| BcnI | CCSGG | 1 cut(s) | 978 |
| BcoDI | GTCTC | 1 cut(s) | 888 |
| BfoI | RGCGCY | 2 cut(s) | 583, 637 |
| BfuI | GTATCC | 2 cut(s) | 712, 1141 |
| BlpI | GCTNAGC | 1 cut(s) | 972 |
| Bme1390I | CCNGG | 2 cut(s) | 141, 978 |
| BmeT110I | CYCGRG | 1 cut(s) | 584 |
| BmgT120I | GGNCC | 1 cut(s) | 759 |
| BmiI | GGNNCC | 2 cut(s) | 746, 926 |
| BmrFI | CCNGG | 2 cut(s) | 141, 978 |
| BoxI | GACNNNNGTC | 1 cut(s) | 446 |
| BpmI | CTGGAG | 1 cut(s) | 290 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 972 |
| BpuMI | CCSGG | 1 cut(s) | 978 |
| BsaAI | YACGTR | 1 cut(s) | 1048 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1152 |
| BsaJI | CCNNGG | 2 cut(s) | 381, 735 |
| BsaWI | WCCGGW | 2 cut(s) | 622, 1033 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 741, 779, 1143, 1144, 1255 |
| Bse118I | RCCGGY | 1 cut(s) | 1033 |
| Bse1I | ACTGG | 2 cut(s) | 273, 1295 |
| Bse3DI | GCAATG | 1 cut(s) | 1172 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1152 |
| BseAI | TCCGGA | 1 cut(s) | 622 |
| BseBI | CCWGG | 1 cut(s) | 141 |
| BseDI | CCNNGG | 2 cut(s) | 381, 735 |
| BseGI | GGATG | 4 cut(s) | 71, 189, 332, 769 |
| BseJI | GATNNNNATC | 1 cut(s) | 1152 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 741, 779, 1143, 1144, 1255 |
| BseMI | GCAATG | 1 cut(s) | 1172 |
| BseMII | CTCAG | 7 cut(s) | 146, 339, 383, 450, 621, 651, 986 |
| BseNI | ACTGG | 2 cut(s) | 273, 1295 |
| BseRI | GAGGAG | 1 cut(s) | 1067 |
| BsgI | GTGCAG | 1 cut(s) | 302 |
| Bsh1285I | CGRYCG | 1 cut(s) | 253 |
| BshFI | GGCC | 2 cut(s) | 260, 761 |
| BshNI | GGYRCC | 1 cut(s) | 924 |
| BshTI | ACCGGT | 1 cut(s) | 1033 |
| BsiEI | CGRYCG | 1 cut(s) | 253 |
| BsiHKAI | GWGCWC | 1 cut(s) | 290 |
| BsiHKCI | CYCGRG | 1 cut(s) | 584 |
| BsiSI | CCGG | 3 cut(s) | 623, 977, 1034 |
| BslFI | GGGAC | 1 cut(s) | 454 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 741, 779, 1143, 1144, 1255 |
| BsmAI | GTCTC | 1 cut(s) | 888 |
| BsmFI | GGGAC | 1 cut(s) | 454 |
| BsmI | GAATGC | 1 cut(s) | 135 |
| BsnI | GGCC | 2 cut(s) | 260, 761 |
| BsoBI | CYCGRG | 1 cut(s) | 584 |
| Bsp1286I | GDGCHC | 1 cut(s) | 290 |
| Bsp13I | TCCGGA | 1 cut(s) | 622 |
| Bsp143I | GATC | 9 cut(s) | 164, 178, 250, 744, 802, 877, 955, 1126, 1311 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 972 |
| BspACI | CCGC | 5 cut(s) | 173, 742, 1021, 1087, 1138 |
| BspANI | GGCC | 2 cut(s) | 260, 761 |
| BspCNI | CTCAG | 7 cut(s) | 147, 340, 382, 449, 622, 650, 985 |
| BspEI | TCCGGA | 1 cut(s) | 622 |
| BspLI | GGNNCC | 2 cut(s) | 746, 926 |
| BspPI | GGATC | 2 cut(s) | 739, 752 |
| BspT107I | GGYRCC | 1 cut(s) | 924 |
| BsrBI | CCGCTC | 1 cut(s) | 742 |
| BsrDI | GCAATG | 1 cut(s) | 1172 |
| BsrFI | RCCGGY | 1 cut(s) | 1033 |
| BsrI | ACTGG | 2 cut(s) | 273, 1295 |
| BssAI | RCCGGY | 1 cut(s) | 1033 |
| BssECI | CCNNGG | 2 cut(s) | 381, 735 |
| BssMI | GATC | 9 cut(s) | 164, 178, 250, 744, 802, 877, 955, 1126, 1311 |
| BssT1I | CCWWGG | 1 cut(s) | 735 |
| Bst2UI | CCWGG | 1 cut(s) | 141 |
| Bst4CI | ACNGT | 3 cut(s) | 448, 691, 1100 |
| BstBAI | YACGTR | 1 cut(s) | 1048 |
| BstC8I | GCNNGC | 1 cut(s) | 1375 |
| BstDEI | CTNAG | 8 cut(s) | 155, 348, 369, 436, 630, 637, 844, 972 |
| BstDSI | CCRYGG | 1 cut(s) | 381 |
| BstF5I | GGATG | 4 cut(s) | 71, 189, 332, 769 |
| BstH2I | RGCGCY | 2 cut(s) | 583, 637 |
| BstHHI | GCGC | 2 cut(s) | 582, 636 |
| BstKTI | GATC | 9 cut(s) | 167, 181, 253, 747, 805, 880, 958, 1129, 1314 |
| BstMAI | GTCTC | 1 cut(s) | 888 |
| BstMBI | GATC | 9 cut(s) | 164, 178, 250, 744, 802, 877, 955, 1126, 1311 |
| BstMCI | CGRYCG | 1 cut(s) | 253 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 127, 413, 924, 1237, 1362 |
| BstNI | CCWGG | 1 cut(s) | 141 |
| BstNSI | RCATGY | 1 cut(s) | 658 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 446 |
| BstSCI | CCNGG | 2 cut(s) | 139, 976 |
| BstX2I | RGATCY | 1 cut(s) | 744 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 268, 513 |
| BstYI | RGATCY | 1 cut(s) | 744 |
| BsuI | GTATCC | 2 cut(s) | 712, 1141 |
| BsuRI | GGCC | 2 cut(s) | 260, 761 |
| BtgI | CCRYGG | 1 cut(s) | 381 |
| BtsCI | GGATG | 4 cut(s) | 71, 189, 332, 769 |
| BtsIMutI | CAGTG | 1 cut(s) | 696 |
| Cac8I | GCNNGC | 1 cut(s) | 1375 |
| CfoI | GCGC | 2 cut(s) | 582, 636 |
| Cfr10I | RCCGGY | 1 cut(s) | 1033 |
| Cfr13I | GGNCC | 1 cut(s) | 759 |
| Csp6I | GTAC | 1 cut(s) | 396 |
| CspAI | ACCGGT | 1 cut(s) | 1033 |
| CviAII | CATG | 2 cut(s) | 655, 756 |
| CviQI | GTAC | 1 cut(s) | 396 |
| DdeI | CTNAG | 8 cut(s) | 155, 348, 369, 436, 630, 637, 844, 972 |
| DpnI | GATC | 9 cut(s) | 166, 180, 252, 746, 804, 879, 957, 1128, 1313 |
| DpnII | GATC | 9 cut(s) | 164, 178, 250, 744, 802, 877, 955, 1126, 1311 |
| EaeI | YGGCCR | 1 cut(s) | 258 |
| EciI | GGCGGA | 1 cut(s) | 1036 |
| Ecl136II | GAGCTC | 1 cut(s) | 288 |
| Eco130I | CCWWGG | 1 cut(s) | 735 |
| Eco24I | GRGCYC | 1 cut(s) | 290 |
| Eco47III | AGCGCT | 1 cut(s) | 635 |
| Eco53kI | GAGCTC | 1 cut(s) | 288 |
| Eco57I | CTGAAG | 1 cut(s) | 1182 |
| Eco72I | CACGTG | 1 cut(s) | 1048 |
| Eco88I | CYCGRG | 1 cut(s) | 584 |
| EcoICRI | GAGCTC | 1 cut(s) | 288 |
| EcoRI | GAATTC | 1 cut(s) | 1244 |
| EcoRII | CCWGG | 1 cut(s) | 139 |
| EcoT14I | CCWWGG | 1 cut(s) | 735 |
| EcoT38I | GRGCYC | 1 cut(s) | 290 |
| ErhI | CCWWGG | 1 cut(s) | 735 |
| FaeI | CATG | 2 cut(s) | 658, 759 |
| FaqI | GGGAC | 1 cut(s) | 454 |
| FatI | CATG | 2 cut(s) | 654, 755 |
| FauI | CCCGC | 2 cut(s) | 180, 1145 |
| FokI | GGATG | 4 cut(s) | 58, 176, 319, 756 |
| FriOI | GRGCYC | 1 cut(s) | 290 |
| GlaI | GCGC | 2 cut(s) | 581, 635 |
| GsuI | CTGGAG | 1 cut(s) | 290 |
| HaeII | RGCGCY | 2 cut(s) | 583, 637 |
| HaeIII | GGCC | 2 cut(s) | 260, 761 |
| HapII | CCGG | 3 cut(s) | 623, 977, 1034 |
| HhaI | GCGC | 2 cut(s) | 582, 636 |
| Hin1II | CATG | 2 cut(s) | 658, 759 |
| Hin6I | GCGC | 2 cut(s) | 580, 634 |
| HinP1I | GCGC | 2 cut(s) | 580, 634 |
| HindIII | AAGCTT | 1 cut(s) | 1229 |
| HinfI | GANTC | 9 cut(s) | 80, 157, 236, 401, 626, 981, 1117, 1169, 1294 |
| HpaII | CCGG | 3 cut(s) | 623, 977, 1034 |
| HphI | GGTGA | 2 cut(s) | 1126, 1289 |
| Hpy166II | GTNNAC | 1 cut(s) | 423 |
| Hpy188III | TCNNGA | 6 cut(s) | 593, 623, 727, 887, 985, 1323 |
| Hpy8I | GTNNAC | 1 cut(s) | 423 |
| HpyAV | CCTTC | 5 cut(s) | 53, 549, 842, 1157, 1286 |
| HpyCH4III | ACNGT | 3 cut(s) | 448, 691, 1100 |
| HpyCH4IV | ACGT | 3 cut(s) | 510, 1047, 1217 |
| HpyCH4V | TGCA | 5 cut(s) | 283, 416, 536, 776, 952 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 127, 413, 924, 1237, 1362 |
| HpyF3I | CTNAG | 8 cut(s) | 155, 348, 369, 436, 630, 637, 844, 972 |
| HpySE526I | ACGT | 3 cut(s) | 510, 1047, 1217 |
| Hsp92II | CATG | 2 cut(s) | 658, 759 |
| HspAI | GCGC | 2 cut(s) | 580, 634 |
| Kpn2I | TCCGGA | 1 cut(s) | 622 |
| Kzo9I | GATC | 9 cut(s) | 164, 178, 250, 744, 802, 877, 955, 1126, 1311 |
| LmnI | GCTCC | 4 cut(s) | 105, 219, 739, 1054 |
| MaeII | ACGT | 3 cut(s) | 510, 1047, 1217 |
| MaeIII | GTNAC | 3 cut(s) | 150, 936, 1132 |
| MalI | GATC | 9 cut(s) | 166, 180, 252, 746, 804, 879, 957, 1128, 1313 |
| MbiI | CCGCTC | 1 cut(s) | 742 |
| MboI | GATC | 9 cut(s) | 164, 178, 250, 744, 802, 877, 955, 1126, 1311 |
| MboII | GAAGA | 6 cut(s) | 16, 47, 50, 287, 1064, 1259 |
| MflI | RGATCY | 1 cut(s) | 744 |
| MhlI | GDGCHC | 1 cut(s) | 290 |
| MlsI | TGGCCA | 1 cut(s) | 260 |
| MluCI | AATT | 9 cut(s) | 208, 313, 328, 544, 862, 1010, 1067, 1076, 1244 |
| MluNI | TGGCCA | 1 cut(s) | 260 |
| MlyI | GAGTC | 2 cut(s) | 166, 1288 |
| MmeI | TCCRAC | 2 cut(s) | 140, 1304 |
| MnlI | CCTC | 8 cut(s) | 86, 211, 265, 510, 593, 901, 981, 1045 |
| Mox20I | TGGCCA | 1 cut(s) | 260 |
| MroI | TCCGGA | 1 cut(s) | 622 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1071 |
| MscI | TGGCCA | 1 cut(s) | 260 |
| MseI | TTAA | 3 cut(s) | 999, 1106, 1214 |
| Msp20I | TGGCCA | 1 cut(s) | 260 |
| MspA1I | CMGCKG | 1 cut(s) | 1089 |
| MspI | CCGG | 3 cut(s) | 623, 977, 1034 |
| MspR9I | CCNGG | 2 cut(s) | 141, 978 |
| Mva1269I | GAATGC | 1 cut(s) | 135 |
| MvaI | CCWGG | 1 cut(s) | 141 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 127, 413, 924, 1237, 1362 |
| NciI | CCSGG | 1 cut(s) | 978 |
| NdeII | GATC | 9 cut(s) | 164, 178, 250, 744, 802, 877, 955, 1126, 1311 |
| NlaIII | CATG | 2 cut(s) | 658, 759 |
| NlaIV | GGNNCC | 2 cut(s) | 746, 926 |
| NmuCI | GTSAC | 1 cut(s) | 1132 |
| NspI | RCATGY | 1 cut(s) | 658 |
| PaeR7I | CTCGAG | 1 cut(s) | 584 |
| PctI | GAATGC | 1 cut(s) | 135 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1071 |
| PfeI | GAWTC | 7 cut(s) | 80, 236, 401, 626, 981, 1117, 1169 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1255 |
| PinAI | ACCGGT | 1 cut(s) | 1033 |
| Ple19I | CGATCG | 1 cut(s) | 253 |
| PleI | GAGTC | 2 cut(s) | 165, 1288 |
| PmaCI | CACGTG | 1 cut(s) | 1048 |
| PmlI | CACGTG | 1 cut(s) | 1048 |
| PpsI | GAGTC | 2 cut(s) | 165, 1288 |
| Ppu21I | YACGTR | 1 cut(s) | 1048 |
| PshAI | GACNNNNGTC | 1 cut(s) | 446 |
| Psp124BI | GAGCTC | 1 cut(s) | 290 |
| Psp6I | CCWGG | 1 cut(s) | 139 |
| PspCI | CACGTG | 1 cut(s) | 1048 |
| PspGI | CCWGG | 1 cut(s) | 139 |
| PspN4I | GGNNCC | 2 cut(s) | 746, 926 |
| PspPI | GGNCC | 1 cut(s) | 759 |
| PspXI | VCTCGAGB | 1 cut(s) | 584 |
| PsuI | RGATCY | 1 cut(s) | 744 |
| PvuI | CGATCG | 1 cut(s) | 253 |
| RsaI | GTAC | 1 cut(s) | 397 |
| RsaNI | GTAC | 1 cut(s) | 396 |
| SacI | GAGCTC | 1 cut(s) | 290 |
| SaqAI | TTAA | 3 cut(s) | 999, 1106, 1214 |
| Sau3AI | GATC | 9 cut(s) | 164, 178, 250, 744, 802, 877, 955, 1126, 1311 |
| Sau96I | GGNCC | 1 cut(s) | 759 |
| SchI | GAGTC | 2 cut(s) | 166, 1288 |
| ScrFI | CCNGG | 2 cut(s) | 141, 978 |
| SduI | GDGCHC | 1 cut(s) | 290 |
| Sfr274I | CTCGAG | 1 cut(s) | 584 |
| SlaI | CTCGAG | 1 cut(s) | 584 |
| SmlI | CTYRAG | 1 cut(s) | 584 |
| SmoI | CTYRAG | 1 cut(s) | 584 |
| Sse9I | AATT | 9 cut(s) | 208, 313, 328, 544, 862, 1010, 1067, 1076, 1244 |
| SsiI | CCGC | 5 cut(s) | 173, 742, 1021, 1087, 1138 |
| SstI | GAGCTC | 1 cut(s) | 290 |
| StyD4I | CCNGG | 2 cut(s) | 139, 976 |
| StyI | CCWWGG | 1 cut(s) | 735 |
| TaaI | ACNGT | 3 cut(s) | 448, 691, 1100 |
| TaiI | ACGT | 3 cut(s) | 513, 1050, 1220 |
| TaqI | TCGA | 3 cut(s) | 78, 585, 942 |
| TasI | AATT | 9 cut(s) | 208, 313, 328, 544, 862, 1010, 1067, 1076, 1244 |
| TfiI | GAWTC | 7 cut(s) | 80, 236, 401, 626, 981, 1117, 1169 |
| Tru1I | TTAA | 3 cut(s) | 999, 1106, 1214 |
| Tru9I | TTAA | 3 cut(s) | 999, 1106, 1214 |
| TscAI | CASTG | 1 cut(s) | 696 |
| TseFI | GTSAC | 1 cut(s) | 1132 |
| Tsp45I | GTSAC | 1 cut(s) | 1132 |
| TspDTI | ATGAA | 8 cut(s) | 17, 72, 228, 279, 321, 324, 1044, 1161 |
| TspRI | CASTG | 1 cut(s) | 696 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1255 |
| XapI | RAATTY | 4 cut(s) | 313, 328, 1067, 1244 |
| XceI | RCATGY | 1 cut(s) | 658 |
| XhoI | CTCGAG | 1 cut(s) | 584 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1071 |