pycom04g04370

Autophagy-related protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0008019
Physical Location & Seq
Reverse (-)
3914337 .. 3918017
3681 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g04370.1

Sequence Viewer

Length: 2301 bp
ATGAACATATTCCTCCATAGATTTATGCAAAAGATAACATATATTTCTTACTTCATCAAAGATGCAAAATTACAGTTTCCTGTTTTTAGAGAGGCAATGGTCCGTCAGGAGGATCTATTTTTGGACTTAAAGTTGGTCCGCGGGATCGGCCCTGCATATAGAGCCTGCTTAGCAGAAATAGTCAGACGAAAGGCTTCATTGAAGCTTTACATGGGGATGGCTGGACAGTTGGCTGAAAGACTTGCGACAAAGAGGGAGACTGAAGTCAGGAGACGGGAGGAGTTTTTGAGAACTCACAGTTTATACATACCCAGGGATGTATTAGCATCCATGGGACTATATGATACCCCTAATCAGTGTGATGTCAACATAGCTCCTTTTGATACTAGCTTGCTTGATATTGAGATTTCAGACATTGACCGTTATGCACCTGAGTACTTGACTGCACTGTCTTCAAAGAGTGCGTTTAGAGGTTCAAATTCTATGTCGAATGAAACTTGTCATTCGGTTGATGCTGATGAGAGTACATTGGATAACTTTGAGAATTGCGACTCTGAGGAGCTACTTGAAGGCTGTGGGTTGGTAGAGATTGCTGGAACAGGTAAGTTGGAAGTTGAGAATGCAAAACTGAAAGCAGAACTGGCGTCTGCTATAGCTGTGATTTGTTCATTCTGGCCTGAAGTAGACCTTGAATCATTGGATGATAGTAAAGTGGATAATTTATTGAAGGATGCCGCAGCGAAGACAGCTGAAGCCTTGCACCTGAAAGATGAATATGGAAAGCATCTAAAATTGATGCTCAGGGAGAAGCAGATGCAGTGTCTTTCATATGAGAAACGCATTCAAGAACTTGAACAGAGATTGTCTGATCAGTATTCGCAAAGCCAGAAGATTTCAAATGATAAGGATGCCTCTGAATTTGGAATTTTGTCTGATAAGGTTGAGATCTGCAAGCAAGAAGGTGGTAGGGGAGTCCATATGCCTTGCTCATCTAATACTGATCCCATGGATGAGGTTTCCTGCATCTCTAGTGTTTTTGATGCAAAACTGGGTCTGTTCAATGTGCAACCTGGAAAAATGAGAGATGGGGTAGATGAAAATATGATGGATTCTTCTGCAGTACGAAATCATCTCATGGATTCATCCATGCAAGAGCTACAGCGTGAAGAACTGCTAGCCAGTGGTAAAGATGGAAAAGATAAGATGGAGGGGCAGCTGGGCATGTCACTGACAAACAGTTCTACTGCTGAAAGCATGCCTGAACCTCTTACTGTTATACCATGTGAAACAGCAGTTGACCCAGGCTTGGACACCAAAGTCAGTGCGGAGCTGTTACTGGAATTGCAAACTGCACTTTCAGAGAAGTCAAACCAGTTGAGTGAAACAGAAATTAAGCTTAAAGCTGCTATGGAGGATGTTTCTATGCTTAAGAGGGAATTGGACACAAATCGGAAACTCCTTGACGAATCTCAGATGAATTGTGCGCACTTGGAGAATTGTTTACATGAGGCAAGAGAGGAAGCTCAAACCCATCTTTGTGCGGCTGATCGTAGGGCCTCGGAGTATAGTGCACTGCGCGCATCTGCTGTGAAAATGCGTGGCCTTTTTGAAAGACTTAGGAGCTGTGTTTATGCTCAGGGTGGGGTGGCTAGTTTTAATGAATCTTTGCGCACCCTAGCACAATCTCTGGGCAATTCTATTAACGACAATGAAGATGATGGTACTGTTGAATTTCGGAAATGTATTCGGGTCCTGGCAGAAAGGGTTGGTTTCTTGTCAAGGCACCGTGAAGAGCTGCTTGACAAGTATCCAAAGGTTGAAGCTGCAAATGAACAACTTAGAATAGAATTGGAAGAGAAGAAGGAGCTGGTTAAAACTTTGTATACTAAGCATCAACTTGAGAAGCAGGCAAACAAAGAGAAGATATCTTTCGGTCGCTTGGTAGTCCACGAGATTGCTGCATTTGTTCTAAACACATTTGGGCAGTACGAGGCAATTAATCGGAATTGCTCCAACTACTACCTGTCTGCTGAATCTGTAGCCTTGTTTATCGATCATCTCCCAAATCAACCTAACTACATTGTGGGACAAATTGTGCACATCGAACGGCAGACTGTGAAGCCATTGGCTCCTAGTTCAACCCGGTCTGAGCACGAGCTAACATCTGACACGGGAACTGACCGGTTGGCCTTGAATTCAGGATTGAACCCGTATGGTCTCCCAATCGGCTGTGAATACTTCGTAGTGACAGTAGCCATGTTACCAGGTACCACCACCATTCATACCCCGCCTCCTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000272 GO:0000407 GO:0000422 GO:0001932 GO:0001934 GO:0003674 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005776 GO:0005911 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009506 GO:0009893 GO:0009987 GO:0010150 GO:0010562 GO:0010604 GO:0015980 GO:0016020 GO:0016043 GO:0016052 GO:0016236 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0022411 GO:0022607 GO:0030054 GO:0030242 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032947 GO:0032991 GO:0034045 GO:0042325 GO:0042327 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0045937 GO:0046983 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0055044 GO:0055114 GO:0060255 GO:0061695 GO:0061709 GO:0061723 GO:0061726 GO:0061912 GO:0061919 GO:0065007 GO:0070925 GO:0071704 GO:0071840 GO:0080090 GO:0090693 GO:0098805 GO:0099402 GO:1901575 GO:1902494 GO:1902554 GO:1902911 GO:1903008 GO:1905037 GO:1990234 GO:1990316
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04139 map04136 map04138 map04139
Pfam Domains
Protein Families
APG17 ATG11

Protein Analysis

767

Amino Acids

85.89

Weight (kDa)

5.14

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATG17_like PF04108 5 - 102 5e-07 Autophagy protein ATG17-like domain
ATG11 PF10377 630 - 753 1.1e-18 Autophagy-related protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 448, 1316
Acc16I TGCGCA 2 cut(s) 1485, 1670
Acc65I GGTACC 1 cut(s) 2267
AccB1I GGYRCC 2 cut(s) 1782, 2267
AccI GTMKAC 2 cut(s) 684, 1883
AccII CGCG 2 cut(s) 141, 1578
AciI CCGC 6 cut(s) 139, 141, 735, 1325, 1541, 2288
AclWI GGATC 3 cut(s) 120, 152, 995
AcsI RAATTY 5 cut(s) 478, 917, 924, 1730, 2194
AcuI CTGAAG 3 cut(s) 282, 699, 771
AcyI GRCGYC 1 cut(s) 644
AfaI GTAC 6 cut(s) 437, 526, 1122, 1723, 1988, 2269
AfiI CCNNNNNNNGG 2 cut(s) 109, 1306
AflII CTTAAG 1 cut(s) 1427
AgeI ACCGGT 1 cut(s) 2181
AjnI CCWGG 5 cut(s) 311, 1069, 1300, 1752, 2263
Alw21I GWGCWC 3 cut(s) 1573, 2100, 2154
Alw26I GTCTC 3 cut(s) 251, 265, 2222
Alw44I GTGCAC 2 cut(s) 1569, 2096
AlwI GGATC 3 cut(s) 120, 152, 995
AoxI GGCC 5 cut(s) 148, 674, 1554, 1600, 2187
ApaLI GTGCAC 2 cut(s) 1569, 2096
ApeKI GCWGC 6 cut(s) 737, 1213, 1403, 1795, 1823, 1958
ApoI RAATTY 5 cut(s) 478, 917, 924, 1730, 2194
ArsI GACNNNNNNTTYG 2 cut(s) 470, 502
AseI ATTAAT 1 cut(s) 1998
AsiGI ACCGGT 1 cut(s) 2181
Asp700I GAANNNNTTC 2 cut(s) 8, 193
Asp718I GGTACC 1 cut(s) 2267
AspLEI GCGC 4 cut(s) 1486, 1578, 1580, 1671
AspS9I GGNCC 5 cut(s) 100, 136, 149, 1554, 1750
AsuC2I CCSGG 1 cut(s) 2143
AsuNHI GCTAGC 1 cut(s) 1174
AvaII GGWCC 3 cut(s) 100, 136, 1750
BaeGI GKGCMC 2 cut(s) 1573, 2100
BanI GGYRCC 2 cut(s) 1782, 2267
BauI CACGAG 2 cut(s) 1949, 2153
BbsI GAAGAC 2 cut(s) 444, 749
Bbv12I GWGCWC 3 cut(s) 1573, 2100, 2154
BbvI GCAGC 6 cut(s) 749, 1225, 1390, 1782, 1810, 1945
BccI CCATC 7 cut(s) 211, 1079, 1099, 1184, 1198, 1539, 1712
BceAI ACGGC 1 cut(s) 2123
BcgI CGANNNNNNTGC 2 cut(s) 1940, 1974
BciT130I CCWGG 5 cut(s) 313, 1071, 1302, 1754, 2265
BciVI GTATCC 1 cut(s) 1818
BclI TGATCA 1 cut(s) 868
BcnI CCSGG 1 cut(s) 2143
BcoDI GTCTC 3 cut(s) 251, 265, 2222
BfaI CTAG 6 cut(s) 387, 1029, 1175, 1650, 1676, 2133
BfmI CTRYAG 4 cut(s) 651, 1116, 1157, 2037
BfrI CTTAAG 1 cut(s) 1427
BfuI GTATCC 1 cut(s) 1818
BglII AGATCT 1 cut(s) 945
BisI GCNGC 8 cut(s) 735, 738, 1214, 1404, 1542, 1796, 1824, 1959
BlpI GCTNAGC 1 cut(s) 169
BlsI GCNGC 8 cut(s) 736, 739, 1215, 1405, 1543, 1797, 1825, 1960
BmcAI AGTACT 1 cut(s) 437
Bme1390I CCNGG 6 cut(s) 313, 1071, 1302, 1754, 2143, 2265
Bme18I GGWCC 3 cut(s) 100, 136, 1750
BmgT120I GGNCC 5 cut(s) 100, 136, 149, 1554, 1750
BmiI GGNNCC 4 cut(s) 1751, 1784, 2130, 2269
BmrFI CCNGG 6 cut(s) 313, 1071, 1302, 1754, 2143, 2265
BmrI ACTGGG 1 cut(s) 1058
BmtI GCTAGC 1 cut(s) 1178
BmuI ACTGGG 1 cut(s) 1058
BoxI GACNNNNGTC 1 cut(s) 263
BpiI GAAGAC 2 cut(s) 444, 749
Bpu10I CCTNAGC 2 cut(s) 800, 1635
Bpu1102I GCTNAGC 1 cut(s) 169
BpuEI CTTGAG 1 cut(s) 1919
BpuMI CCSGG 1 cut(s) 2143
Bsa29I ATCGAT 1 cut(s) 2052
BsaHI GRCGYC 1 cut(s) 644
BsaI GGTCTC 1 cut(s) 2222
BsaJI CCNNGG 7 cut(s) 139, 311, 312, 330, 1005, 1300, 1557
BsaWI WCCGGW 1 cut(s) 2181
BsaXI ACNNNNNCTCC 1 cut(s) 2275
Bsc4I CCNNNNNNNGG 2 cut(s) 109, 1306
Bse118I RCCGGY 1 cut(s) 2181
Bse1I ACTGG 5 cut(s) 645, 1053, 1179, 1341, 1372
Bse3DI GCAATG 1 cut(s) 102
BseBI CCWGG 5 cut(s) 313, 1071, 1302, 1754, 2265
BseCI ATCGAT 1 cut(s) 2052
BseDI CCNNGG 7 cut(s) 139, 311, 312, 330, 1005, 1300, 1557
BseGI GGATG 9 cut(s) 222, 322, 326, 706, 736, 913, 1015, 1142, 1420
BseLI CCNNNNNNNGG 2 cut(s) 109, 1306
BseMI GCAATG 1 cut(s) 102
BseMII CTCAG 6 cut(s) 423, 546, 814, 1484, 1649, 2139
BseNI ACTGG 5 cut(s) 645, 1053, 1179, 1341, 1372
BsePI GCGCGC 1 cut(s) 1576
BseRI GAGGAG 2 cut(s) 293, 572
BseSI GKGCMC 2 cut(s) 1573, 2100
BseXI GCAGC 6 cut(s) 749, 1225, 1390, 1782, 1810, 1945
BseYI CCCAGC 1 cut(s) 1216
BsgI GTGCAG 2 cut(s) 429, 1335
Bsh1236I CGCG 2 cut(s) 141, 1578
Bsh1285I CGRYCG 1 cut(s) 1936
BshFI GGCC 5 cut(s) 150, 676, 1556, 1602, 2189
BshNI GGYRCC 2 cut(s) 1782, 2267
BshTI ACCGGT 1 cut(s) 2181
BshVI ATCGAT 1 cut(s) 2052
BsiEI CGRYCG 1 cut(s) 1936
BsiHKAI GWGCWC 3 cut(s) 1573, 2100, 2154
BsiSI CCGG 2 cut(s) 2143, 2182
BslFI GGGAC 2 cut(s) 348, 2100
BslI CCNNNNNNNGG 2 cut(s) 109, 1306
BsmAI GTCTC 3 cut(s) 251, 265, 2222
BsmBI CGTCTC 1 cut(s) 265
BsmFI GGGAC 2 cut(s) 348, 2100
BsmI GAATGC 2 cut(s) 625, 840
BsnI GGCC 5 cut(s) 150, 676, 1556, 1602, 2189
Bso31I GGTCTC 1 cut(s) 2222
Bsp1286I GDGCHC 3 cut(s) 1573, 2100, 2154
Bsp143I GATC 7 cut(s) 112, 144, 868, 945, 1000, 1546, 2053
Bsp1720I GCTNAGC 1 cut(s) 169
Bsp19I CCATGG 2 cut(s) 330, 1005
BspACI CCGC 6 cut(s) 139, 141, 735, 1325, 1541, 2288
BspANI GGCC 5 cut(s) 150, 676, 1556, 1602, 2189
BspCNI CTCAG 6 cut(s) 424, 547, 813, 1483, 1648, 2140
BspDI ATCGAT 1 cut(s) 2052
BspFNI CGCG 2 cut(s) 141, 1578
BspLI GGNNCC 4 cut(s) 1751, 1784, 2130, 2269
BspMAI CTGCAG 1 cut(s) 1120
BspOI GCTAGC 1 cut(s) 1178
BspPI GGATC 3 cut(s) 120, 152, 995
BspQI GCTCTTC 1 cut(s) 1785
BspT107I GGYRCC 2 cut(s) 1782, 2267
BspTI CTTAAG 1 cut(s) 1427
BspTNI GGTCTC 1 cut(s) 2222
BsrDI GCAATG 1 cut(s) 102
BsrFI RCCGGY 1 cut(s) 2181
BsrI ACTGG 5 cut(s) 645, 1053, 1179, 1341, 1372
BssAI RCCGGY 1 cut(s) 2181
BssECI CCNNGG 7 cut(s) 139, 311, 312, 330, 1005, 1300, 1557
BssHII GCGCGC 1 cut(s) 1576
BssMI GATC 7 cut(s) 112, 144, 868, 945, 1000, 1546, 2053
BssNAI GTATAC 1 cut(s) 1884
BssNI GRCGYC 1 cut(s) 644
BssSI CACGAG 2 cut(s) 1949, 2153
BssT1I CCWWGG 2 cut(s) 330, 1005
Bst1107I GTATAC 1 cut(s) 1884
Bst2BI CACGAG 2 cut(s) 1949, 2153
Bst2UI CCWGG 5 cut(s) 313, 1071, 1302, 1754, 2265
Bst6I CTCTTC 2 cut(s) 1785, 1848
BstACI GRCGYC 1 cut(s) 644
BstAFI CTTAAG 1 cut(s) 1427
BstC8I GCNNGC 7 cut(s) 166, 392, 953, 1176, 1256, 1578, 1908
BstDSI CCRYGG 3 cut(s) 139, 330, 1005
BstF5I GGATG 9 cut(s) 222, 322, 326, 706, 736, 913, 1015, 1142, 1420
BstFNI CGCG 2 cut(s) 141, 1578
BstHHI GCGC 4 cut(s) 1486, 1578, 1580, 1671
BstKTI GATC 7 cut(s) 115, 147, 871, 948, 1003, 1549, 2056
BstMAI GTCTC 3 cut(s) 251, 265, 2222
BstMBI GATC 7 cut(s) 112, 144, 868, 945, 1000, 1546, 2053
BstMCI CGRYCG 1 cut(s) 1936
BstMWI GCNNNNNNNGC 6 cut(s) 147, 161, 170, 641, 746, 1577
BstNI CCWGG 5 cut(s) 313, 1071, 1302, 1754, 2265
BstNSI RCATGY 2 cut(s) 1225, 1258
BstPAI GACNNNNGTC 1 cut(s) 263
BstSCI CCNGG 6 cut(s) 311, 1069, 1300, 1752, 2141, 2263
BstSFI CTRYAG 4 cut(s) 651, 1116, 1157, 2037
BstSLI GKGCMC 2 cut(s) 1573, 2100
BstUI CGCG 2 cut(s) 141, 1578
BstV1I GCAGC 6 cut(s) 749, 1225, 1390, 1782, 1810, 1945
BstV2I GAAGAC 2 cut(s) 444, 749
BstX2I RGATCY 2 cut(s) 112, 945
BstYI RGATCY 2 cut(s) 112, 945
BstZ17I GTATAC 1 cut(s) 1884
Bsu15I ATCGAT 1 cut(s) 2052
BsuI GTATCC 1 cut(s) 1818
BsuRI GGCC 5 cut(s) 150, 676, 1556, 1602, 2189
BsuTUI ATCGAT 1 cut(s) 2052
BtgI CCRYGG 3 cut(s) 139, 330, 1005
BtsCI GGATG 9 cut(s) 222, 322, 326, 706, 736, 913, 1015, 1142, 1420
BtsI GCAGTG 2 cut(s) 824, 1571
BtsIMutI CAGTG 7 cut(s) 362, 446, 824, 1186, 1226, 1327, 1571
Cac8I GCNNGC 7 cut(s) 166, 392, 953, 1176, 1256, 1578, 1908
CfoI GCGC 4 cut(s) 1486, 1578, 1580, 1671
Cfr10I RCCGGY 1 cut(s) 2181
Cfr13I GGNCC 5 cut(s) 100, 136, 149, 1554, 1750
Cfr42I CCGCGG 1 cut(s) 142
ClaI ATCGAT 1 cut(s) 2052
CseI GACGC 1 cut(s) 633
CsiI ACCWGGT 1 cut(s) 2263
Csp6I GTAC 6 cut(s) 436, 525, 1121, 1722, 1987, 2268
CspAI ACCGGT 1 cut(s) 2181
CviQI GTAC 6 cut(s) 436, 525, 1121, 1722, 1987, 2268
DpnI GATC 7 cut(s) 114, 146, 870, 947, 1002, 1548, 2055
DpnII GATC 7 cut(s) 112, 144, 868, 945, 1000, 1546, 2053
DrdI GACNNNNNNGTC 2 cut(s) 448, 1316
DseDI GACNNNNNNGTC 2 cut(s) 448, 1316
Eam1104I CTCTTC 2 cut(s) 1785, 1848
EarI CTCTTC 2 cut(s) 1785, 1848
Eco130I CCWWGG 2 cut(s) 330, 1005
Eco31I GGTCTC 1 cut(s) 2222
Eco32I GATATC 1 cut(s) 1926
Eco47I GGWCC 3 cut(s) 100, 136, 1750
Eco57I CTGAAG 3 cut(s) 282, 699, 771
EcoO109I RGGNCCY 2 cut(s) 1554, 1750
EcoRI GAATTC 1 cut(s) 2194
EcoRII CCWGG 5 cut(s) 311, 1069, 1300, 1752, 2263
EcoRV GATATC 1 cut(s) 1926
EcoT14I CCWWGG 2 cut(s) 330, 1005
ErhI CCWWGG 2 cut(s) 330, 1005
Esp3I CGTCTC 1 cut(s) 265
FalI AAGNNNNNCTT 4 cut(s) 672, 704, 1782, 1814
FaqI GGGAC 2 cut(s) 348, 2100
FauI CCCGC 2 cut(s) 134, 2295
FauNDI CATATG 2 cut(s) 829, 978
FbaI TGATCA 1 cut(s) 868
FblI GTMKAC 2 cut(s) 684, 1883
Fnu4HI GCNGC 8 cut(s) 735, 738, 1214, 1404, 1542, 1796, 1824, 1959
FokI GGATG 9 cut(s) 229, 313, 329, 713, 743, 920, 1022, 1129, 1427
Fsp4HI GCNGC 8 cut(s) 735, 738, 1214, 1404, 1542, 1796, 1824, 1959
FspAI RTGCGCAY 1 cut(s) 1485
FspBI CTAG 6 cut(s) 387, 1029, 1175, 1650, 1676, 2133
FspI TGCGCA 2 cut(s) 1485, 1670
GlaI GCGC 4 cut(s) 1485, 1577, 1579, 1670
GluI GCNGC 8 cut(s) 735, 738, 1214, 1404, 1542, 1796, 1824, 1959
GsaI CCCAGC 1 cut(s) 1220
HaeIII GGCC 5 cut(s) 150, 676, 1556, 1602, 2189
HapII CCGG 2 cut(s) 2143, 2182
HgaI GACGC 1 cut(s) 633
HhaI GCGC 4 cut(s) 1486, 1578, 1580, 1671
Hin1I GRCGYC 1 cut(s) 644
Hin6I GCGC 4 cut(s) 1484, 1576, 1578, 1669
HinP1I GCGC 4 cut(s) 1484, 1576, 1578, 1669
HincII GTYRAC 2 cut(s) 367, 1297
HindII GTYRAC 2 cut(s) 367, 1297
HindIII AAGCTT 2 cut(s) 203, 1394
HinfI GANTC 8 cut(s) 551, 692, 972, 1109, 1139, 1466, 1661, 2033
HpaII CCGG 2 cut(s) 2143, 2182
Hpy166II GTNNAC 8 cut(s) 367, 685, 1297, 1502, 1571, 1884, 1948, 2098
Hpy188III TCNNGA 5 cut(s) 107, 268, 845, 2199, 2298
Hpy8I GTNNAC 8 cut(s) 367, 685, 1297, 1502, 1571, 1884, 1948, 2098
HpyAV CCTTC 4 cut(s) 563, 721, 953, 1855
HpyF10VI GCNNNNNNNGC 6 cut(s) 147, 161, 170, 641, 746, 1577
Hsp92I GRCGYC 1 cut(s) 644
HspAI GCGC 4 cut(s) 1484, 1576, 1578, 1669
KpnI GGTACC 1 cut(s) 2271
Ksp22I TGATCA 1 cut(s) 868
KspI CCGCGG 1 cut(s) 142
Kzo9I GATC 7 cut(s) 112, 144, 868, 945, 1000, 1546, 2053
LguI GCTCTTC 1 cut(s) 1785
LmnI GCTCC 7 cut(s) 379, 559, 1327, 1620, 1864, 2015, 2134
Lsp1109I GCAGC 6 cut(s) 749, 1225, 1390, 1782, 1810, 1945
MabI ACCWGGT 1 cut(s) 2263
MaeI CTAG 6 cut(s) 387, 1029, 1175, 1650, 1676, 2133
MaeIII GTNAC 4 cut(s) 1224, 1332, 2245, 2259
MalI GATC 7 cut(s) 114, 146, 870, 947, 1002, 1548, 2055
MboI GATC 7 cut(s) 112, 144, 868, 945, 1000, 1546, 2053
MflI RGATCY 2 cut(s) 112, 945
MhlI GDGCHC 3 cut(s) 1573, 2100, 2154
MlyI GAGTC 2 cut(s) 545, 981
MmeI TCCRAC 2 cut(s) 588, 2037
MroXI GAANNNNTTC 2 cut(s) 8, 193
MseI TTAA 8 cut(s) 128, 1392, 1398, 1428, 1656, 1701, 1872, 1998
MslI CAYNNNNRTG 2 cut(s) 215, 1536
MspA1I CMGCKG 3 cut(s) 141, 749, 1216
MspCI CTTAAG 1 cut(s) 1427
MspI CCGG 2 cut(s) 2143, 2182
MspR9I CCNGG 6 cut(s) 313, 1071, 1302, 1754, 2143, 2265
Mva1269I GAATGC 2 cut(s) 625, 840
MvaI CCWGG 5 cut(s) 313, 1071, 1302, 1754, 2265
MvnI CGCG 2 cut(s) 141, 1578
MwoI GCNNNNNNNGC 6 cut(s) 147, 161, 170, 641, 746, 1577
NciI CCSGG 1 cut(s) 2143
NcoI CCATGG 2 cut(s) 330, 1005
NdeI CATATG 2 cut(s) 829, 978
NdeII GATC 7 cut(s) 112, 144, 868, 945, 1000, 1546, 2053
NheI GCTAGC 1 cut(s) 1174
NlaIV GGNNCC 4 cut(s) 1751, 1784, 2130, 2269
NmuCI GTSAC 2 cut(s) 1224, 2245
NsbI TGCGCA 2 cut(s) 1485, 1670
NspI RCATGY 2 cut(s) 1225, 1258
PaeI GCATGC 1 cut(s) 1258
PasI CCCWGGG 1 cut(s) 312
PauI GCGCGC 1 cut(s) 1576
PciSI GCTCTTC 1 cut(s) 1785
PctI GAATGC 2 cut(s) 625, 840
PdmI GAANNNNTTC 2 cut(s) 8, 193
PfeI GAWTC 6 cut(s) 692, 1109, 1139, 1466, 1661, 2033
PinAI ACCGGT 1 cut(s) 2181
PkrI GCNGC 8 cut(s) 736, 739, 1215, 1405, 1543, 1797, 1825, 1960
PleI GAGTC 2 cut(s) 545, 980
PpsI GAGTC 2 cut(s) 545, 980
PpuMI RGGWCCY 1 cut(s) 1750
PshAI GACNNNNGTC 1 cut(s) 263
PshBI ATTAAT 1 cut(s) 1998
Psp5II RGGWCCY 1 cut(s) 1750
Psp6I CCWGG 5 cut(s) 311, 1069, 1300, 1752, 2263
PspFI CCCAGC 1 cut(s) 1216
PspGI CCWGG 5 cut(s) 311, 1069, 1300, 1752, 2263
PspN4I GGNNCC 4 cut(s) 1751, 1784, 2130, 2269
PspPI GGNCC 5 cut(s) 100, 136, 149, 1554, 1750
PspPPI RGGWCCY 1 cut(s) 1750
PstI CTGCAG 1 cut(s) 1120
PsuI RGATCY 2 cut(s) 112, 945
PteI GCGCGC 1 cut(s) 1576
PvuII CAGCTG 2 cut(s) 749, 1216
RsaI GTAC 6 cut(s) 437, 526, 1122, 1723, 1988, 2269
RsaNI GTAC 6 cut(s) 436, 525, 1121, 1722, 1987, 2268
RseI CAYNNNNRTG 2 cut(s) 215, 1536
SacII CCGCGG 1 cut(s) 142
SapI GCTCTTC 1 cut(s) 1785
SaqAI TTAA 8 cut(s) 128, 1392, 1398, 1428, 1656, 1701, 1872, 1998
SatI GCNGC 8 cut(s) 735, 738, 1214, 1404, 1542, 1796, 1824, 1959
Sau3AI GATC 7 cut(s) 112, 144, 868, 945, 1000, 1546, 2053
Sau96I GGNCC 5 cut(s) 100, 136, 149, 1554, 1750
ScaI AGTACT 1 cut(s) 437
SchI GAGTC 2 cut(s) 545, 981
ScrFI CCNGG 6 cut(s) 313, 1071, 1302, 1754, 2143, 2265
SduI GDGCHC 3 cut(s) 1573, 2100, 2154
SexAI ACCWGGT 1 cut(s) 2263
SfcI CTRYAG 4 cut(s) 651, 1116, 1157, 2037
Sfr303I CCGCGG 1 cut(s) 142
SgrBI CCGCGG 1 cut(s) 142
SinI GGWCC 3 cut(s) 100, 136, 1750
SmiMI CAYNNNNRTG 2 cut(s) 215, 1536
SmlI CTYRAG 2 cut(s) 1427, 1898
SmoI CTYRAG 2 cut(s) 1427, 1898
SphI GCATGC 1 cut(s) 1258
SsiI CCGC 6 cut(s) 139, 141, 735, 1325, 1541, 2288
SspMI CTAG 6 cut(s) 387, 1029, 1175, 1650, 1676, 2133
StyD4I CCNGG 6 cut(s) 311, 1069, 1300, 1752, 2141, 2263
StyI CCWWGG 2 cut(s) 330, 1005
TaqI TCGA 3 cut(s) 488, 2052, 2103
TaqII GACCGA 1 cut(s) 1922
TatI WGTACW 2 cut(s) 435, 524
TauI GCSGC 2 cut(s) 737, 1544
TfiI GAWTC 6 cut(s) 692, 1109, 1139, 1466, 1661, 2033
Tru1I TTAA 8 cut(s) 128, 1392, 1398, 1428, 1656, 1701, 1872, 1998
Tru9I TTAA 8 cut(s) 128, 1392, 1398, 1428, 1656, 1701, 1872, 1998
TscAI CASTG 7 cut(s) 362, 453, 824, 1186, 1233, 1327, 1578
TseFI GTSAC 2 cut(s) 1224, 2245
TseI GCWGC 6 cut(s) 737, 1213, 1403, 1795, 1823, 1958
Tsp45I GTSAC 2 cut(s) 1224, 2245
TspGWI ACGGA 1 cut(s) 92
TspRI CASTG 7 cut(s) 362, 453, 824, 1186, 1233, 1327, 1578
Vha464I CTTAAG 1 cut(s) 1427
VneI GTGCAC 2 cut(s) 1569, 2096
VpaK11BI GGWCC 3 cut(s) 100, 136, 1750
VspI ATTAAT 1 cut(s) 1998
XapI RAATTY 5 cut(s) 478, 917, 924, 1730, 2194
XceI RCATGY 2 cut(s) 1225, 1258
XmiI GTMKAC 2 cut(s) 684, 1883
XmnI GAANNNNTTC 2 cut(s) 8, 193
XspI CTAG 6 cut(s) 387, 1029, 1175, 1650, 1676, 2133
ZrmI AGTACT 1 cut(s) 437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.