Rorug04G0060700

Autophagy-related protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0008019
Physical Location & Seq
Reverse (-)
9479786 .. 9490047
10262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0060700.1

Sequence Viewer

Length: 2022 bp
ATGCGGAAGCTGATGTATCTAGGGGAGGATAGCTTCGGACCAGCAGGCCCATATTTTCCAAACCTGGAAATTCTGAAAGTAGAAGACTGTGACAGCTTACAGAATTTAAGATCATCCGCAATATCCTTCAAGAATATAATTACTTTACAAGTAAGTCGTTGTAAGGGATTGAAATACTTGATATCGTACTCCATGGCCAAAAGTTTGATGCAACTCACAACACTAGAAGTTCGTGATTGTGAAGAAATGATAAAGATAGTTGCAAGCAATGGAAACGATGATTCTGGAAATGAGATTGAGTTCAGGGTGTTGAAACATTTGGAACTTTCTGCTCTACCAAGTCTGAGAGGCTTTTGCTCGGAAGCTCGCATTGTCAAATTCCCATCCTTGGAAAAATTATCCGTGACTAATTGTGCCCAACTGGAGACGTTCATCATTGATACTATGGATAGTACAATCGACAAGGACCTCAAAGCCACCGACTCAAACGAATACATTGAGACGGGAGTAGTGCAACAATTCCTTTTTGACAACAAGATTGAATTTCCGAGGTTGAAGAGTTTGTCTCTCAAGGGTCTGACAAAGTTAACCACAATATGGCACAGTCAACTTTCTCTAAACTCTTTTAACAGTCTAATAGACCTTGAAGTACATGAATGTGGAAATCTAATAAATATCTTTGCGTCCAGTACTATGGGAAGATTGAGTGCTCTTCAGACCTTATTGATAAAAGAGTGCAAGTCAGTACAAGTTGTATTTGAACTTGGAGGAATTGAAGTTGTAGAAGTACAGGACACATCAGCAGTCACTCCATCGAAACCTTTTGATTGTGAAAATCTAAACTCGGTAGAGATTGATTCCTGTGAGAGTTTGAAATATATATTTCCAGCGTCGGTGGCCAAAAGTCTTCAGAGGTTGAGCAAATTGATGGTGAGTAAGTGTGGAGTAGAGAAAATCATTGCAAACGAAGGGGAACCACAAACAACGCCAGAGTTTGTTTTTTCAAAAGTCACATATGTGAGTTTTGAAGAATTGCCCCAACTTACGTGTTTCTATCCAGCCATGCATGCTTCAACTTGGCCAGCACTTCAAAAATTGGTGGTGGTTGGATGTTACAAATTGGAGATCTTCTCTGAGGCACTTTCGAGCTTTCAAGGAAATTATGAATCAAACCTGTCCACTCCAATTAAACAAACTCTCTTTTCAATTGAGAAGGATTCATTCGCCAACTTGGAAATCTTGACTTTATGCAGCATGGAGATTTGGAATGGTCCACTTCCGGTCCACTTCTTTAGAAAACTAAAATCTCTTACGGTTTGCTGTCCACAGTCCAAGTCAGTTGTTTTCCTTGACAAATTACTCGATGAAGGGAACCCTAGTACTAGTACTAGGGAAAGAGATGAGGCAGTTGAGATTGGGACCCTCCCACATTTAAGAAAGTTGAATCTAGGTTTAATGCCCAACTTGATGCATCTTGGCGAGGATAACTCACAATCAGCCCCCCGCATCCCAAATTTTCCAAACCTGGAAATTCTACTGCTGAATACTTGTGACAGCTTACAGAATCTGAGATCATCCGCAATATCCTTCAAGAATCTGACAACTTTGGAAGTACGTTTTTGCAAGGGATTGAAGTACTTGCTAACTTACTCCGTGGCCAAAGGTTTAATACAGCTCACAAAACTGGAAGTTGAGGATTGCAAGAGACTTGTAAGTATAGTGGGAAGCACCGAAGAAGACGATTGTGGAATTTGTAATGAGATTACATTCAGGCGGTTGAAACATTTGAAACTTTCTCTTCTACCAAGACTGCGAGGCTTTTGCTCCGGAAATTGCATTGCTAAACTCCCAGCCTTGGAATCTTTATCCATCAGCAACCGTCTCAAATTGAAGATTTTCCCGGCTCATGACGAATCGCTACAGACAACAAACGAGGACGGAGACACAGATGTCGATTACTATGAGGCGGAGCTGACTGCTGAGGATGAAATGAATTTGGCAACTACTGATTTGGTATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000272 GO:0000407 GO:0000422 GO:0001932 GO:0001934 GO:0003674 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005776 GO:0005911 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009506 GO:0009893 GO:0009987 GO:0010150 GO:0010562 GO:0010604 GO:0015980 GO:0016020 GO:0016043 GO:0016052 GO:0016236 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0022411 GO:0022607 GO:0030054 GO:0030242 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032947 GO:0032991 GO:0034045 GO:0042325 GO:0042327 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0045937 GO:0046983 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0055044 GO:0055114 GO:0060255 GO:0061695 GO:0061709 GO:0061723 GO:0061726 GO:0061912 GO:0061919 GO:0065007 GO:0070925 GO:0071704 GO:0071840 GO:0080090 GO:0090693 GO:0098805 GO:0099402 GO:1901575 GO:1902494 GO:1902554 GO:1902911 GO:1903008 GO:1905037 GO:1990234 GO:1990316
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04139 map04136 map04138 map04139
Pfam Domains
Protein Families
APG17 ATG11

Protein Analysis

673

Amino Acids

75.24

Weight (kDa)

5.16

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 36 - 144 2.3e-16 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 186 - 263 2.1e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 271 - 315 2.9e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 396 - 524 7.2e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 527 - 568 1.9e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1949
AccB7I CCANNNNNTGG 1 cut(s) 597
AccIII TCCGGA 1 cut(s) 1826
AciI CCGC 6 cut(s) 4, 117, 1504, 1578, 1774, 1967
AcoI YGGCCR 4 cut(s) 195, 897, 1079, 1656
AcsI RAATTY 8 cut(s) 69, 103, 377, 542, 1513, 1530, 1749, 1993
AcuI CTGAAG 2 cut(s) 698, 893
AfiI CCNNNNNNNGG 3 cut(s) 388, 597, 1855
AflIII ACRYGT 1 cut(s) 1046
AhlI ACTAGT 1 cut(s) 1382
AjnI CCWGG 2 cut(s) 63, 1524
AleI CACNNNNGTG 1 cut(s) 1016
AluBI AGCT 8 cut(s) 10, 33, 96, 365, 1149, 1557, 1675, 1972
AluI AGCT 8 cut(s) 10, 33, 96, 365, 1149, 1557, 1675, 1972
Alw21I GWGCWC 1 cut(s) 712
Alw26I GTCTC 6 cut(s) 419, 494, 570, 1699, 1886, 1935
AlwNI CAGNNNCTG 1 cut(s) 1567
Aor13HI TCCGGA 1 cut(s) 1826
AoxI GGCC 5 cut(s) 46, 195, 897, 1079, 1656
ApeKI GCWGC 1 cut(s) 1251
ApoI RAATTY 8 cut(s) 69, 103, 377, 542, 1513, 1530, 1749, 1993
Asp700I GAANNNNTTC 1 cut(s) 1895
AspS9I GGNCC 6 cut(s) 38, 47, 466, 1271, 1282, 1419
AsuC2I CCSGG 1 cut(s) 1901
AsuHPI GGTGA 1 cut(s) 943
AvaII GGWCC 5 cut(s) 38, 466, 1271, 1282, 1419
BaeGI GKGCMC 1 cut(s) 418
BalI TGGCCA 4 cut(s) 197, 899, 1081, 1658
BbsI GAAGAC 3 cut(s) 90, 899, 1743
Bbv12I GWGCWC 1 cut(s) 712
BbvCI CCTCAGC 1 cut(s) 1980
BbvI GCAGC 1 cut(s) 1263
BccI CCATC 4 cut(s) 391, 820, 922, 1877
BcgI CGANNNNNNTGC 2 cut(s) 1803, 1837
BciT130I CCWGG 2 cut(s) 65, 1526
BcnI CCSGG 1 cut(s) 1901
BcoDI GTCTC 6 cut(s) 419, 494, 570, 1699, 1886, 1935
BcuI ACTAGT 1 cut(s) 1382
BfaI CTAG 6 cut(s) 20, 224, 1377, 1383, 1389, 1448
BfmI CTRYAG 1 cut(s) 1919
BglII AGATCT 1 cut(s) 1125
BisI GCNGC 1 cut(s) 1252
BlsI GCNGC 1 cut(s) 1253
BmcAI AGTACT 4 cut(s) 691, 1381, 1387, 1637
Bme1390I CCNGG 3 cut(s) 65, 1526, 1901
Bme18I GGWCC 5 cut(s) 38, 466, 1271, 1282, 1419
BmgT120I GGNCC 6 cut(s) 38, 47, 466, 1271, 1282, 1419
BmiI GGNNCC 4 cut(s) 975, 1373, 1420, 1421
BmrFI CCNGG 3 cut(s) 65, 1526, 1901
BmsI GCATC 4 cut(s) 198, 1458, 1480, 1515
BpiI GAAGAC 3 cut(s) 90, 899, 1743
BplI GAGNNNNNCTC 6 cut(s) 550, 582, 1115, 1147, 1472, 1504
BpmI CTGGAG 1 cut(s) 443
Bpu10I CCTNAGC 1 cut(s) 1980
BpuEI CTTGAG 1 cut(s) 554
BpuMI CCSGG 1 cut(s) 1901
BsaAI YACGTR 1 cut(s) 1047
BsaJI CCNNGG 5 cut(s) 192, 387, 548, 1653, 1854
BsaWI WCCGGW 2 cut(s) 1279, 1826
Bsc4I CCNNNNNNNGG 3 cut(s) 388, 597, 1855
Bse1I ACTGG 3 cut(s) 426, 687, 1689
Bse3DI GCAATG 3 cut(s) 274, 957, 1836
BseAI TCCGGA 1 cut(s) 1826
BseBI CCWGG 2 cut(s) 65, 1526
BseDI CCNNGG 5 cut(s) 192, 387, 548, 1653, 1854
BseGI GGATG 6 cut(s) 113, 383, 1115, 1506, 1574, 1990
BseLI CCNNNNNNNGG 3 cut(s) 388, 597, 1855
BseMI GCAATG 3 cut(s) 274, 957, 1836
BseMII CTCAG 4 cut(s) 335, 1125, 1559, 1971
BseNI ACTGG 3 cut(s) 426, 687, 1689
BseSI GKGCMC 1 cut(s) 418
BseXI GCAGC 1 cut(s) 1263
BseYI CCCAGC 1 cut(s) 1849
BshFI GGCC 5 cut(s) 48, 197, 899, 1081, 1658
BsiHKAI GWGCWC 1 cut(s) 712
BsiSI CCGG 3 cut(s) 1280, 1827, 1901
BslFI GGGAC 1 cut(s) 1432
BslI CCNNNNNNNGG 3 cut(s) 388, 597, 1855
BsmAI GTCTC 6 cut(s) 419, 494, 570, 1699, 1886, 1935
BsmBI CGTCTC 3 cut(s) 419, 494, 1886
BsmFI GGGAC 1 cut(s) 1432
BsnI GGCC 5 cut(s) 48, 197, 899, 1081, 1658
Bsp1286I GDGCHC 2 cut(s) 418, 712
Bsp13I TCCGGA 1 cut(s) 1826
Bsp143I GATC 3 cut(s) 110, 1125, 1571
Bsp19I CCATGG 1 cut(s) 192
BspACI CCGC 6 cut(s) 4, 117, 1504, 1578, 1774, 1967
BspANI GGCC 5 cut(s) 48, 197, 899, 1081, 1658
BspCNI CTCAG 4 cut(s) 336, 1126, 1560, 1972
BspEI TCCGGA 1 cut(s) 1826
BspHI TCATGA 1 cut(s) 1906
BspLI GGNNCC 4 cut(s) 975, 1373, 1420, 1421
BspQI GCTCTTC 1 cut(s) 717
BsrDI GCAATG 3 cut(s) 274, 957, 1836
BsrI ACTGG 3 cut(s) 426, 687, 1689
BssECI CCNNGG 5 cut(s) 192, 387, 548, 1653, 1854
BssMI GATC 3 cut(s) 110, 1125, 1571
BssT1I CCWWGG 3 cut(s) 192, 387, 1854
Bst2UI CCWGG 2 cut(s) 65, 1526
Bst4CI ACNGT 6 cut(s) 89, 605, 632, 1315, 1329, 1880
Bst6I CTCTTC 3 cut(s) 551, 717, 1803
BstBAI YACGTR 1 cut(s) 1047
BstC8I GCNNGC 5 cut(s) 46, 265, 367, 1068, 1083
BstDEI CTNAG 4 cut(s) 344, 1134, 1568, 1980
BstDSI CCRYGG 2 cut(s) 192, 1653
BstF5I GGATG 6 cut(s) 113, 383, 1115, 1506, 1574, 1990
BstKTI GATC 3 cut(s) 113, 1128, 1574
BstMAI GTCTC 6 cut(s) 419, 494, 570, 1699, 1886, 1935
BstMBI GATC 3 cut(s) 110, 1125, 1571
BstMWI GCNNNNNNNGC 2 cut(s) 896, 1067
BstNI CCWGG 2 cut(s) 65, 1526
BstNSI RCATGY 1 cut(s) 1070
BstSCI CCNGG 3 cut(s) 63, 1524, 1899
BstSFI CTRYAG 1 cut(s) 1919
BstSLI GKGCMC 1 cut(s) 418
BstV1I GCAGC 1 cut(s) 1263
BstV2I GAAGAC 3 cut(s) 90, 899, 1743
BstX2I RGATCY 1 cut(s) 1125
BstXI CCANNNNNNTGG 1 cut(s) 694
BstYI RGATCY 1 cut(s) 1125
BsuRI GGCC 5 cut(s) 48, 197, 899, 1081, 1658
BtgI CCRYGG 2 cut(s) 192, 1653
BtsCI GGATG 6 cut(s) 113, 383, 1115, 1506, 1574, 1990
Cac8I GCNNGC 5 cut(s) 46, 265, 367, 1068, 1083
CaiI CAGNNNCTG 1 cut(s) 1567
CciI TCATGA 1 cut(s) 1906
Cfr13I GGNCC 6 cut(s) 38, 47, 466, 1271, 1282, 1419
CseI GACGC 2 cut(s) 672, 879
CviAII CATG 6 cut(s) 193, 653, 1063, 1067, 1255, 1907
DdeI CTNAG 4 cut(s) 344, 1134, 1568, 1980
DpnI GATC 3 cut(s) 112, 1127, 1573
DpnII GATC 3 cut(s) 110, 1125, 1571
DrdI GACNNNNNNGTC 1 cut(s) 1949
DseDI GACNNNNNNGTC 1 cut(s) 1949
EaeI YGGCCR 4 cut(s) 195, 897, 1079, 1656
Eam1104I CTCTTC 3 cut(s) 551, 717, 1803
EarI CTCTTC 3 cut(s) 551, 717, 1803
EciI GGCGGA 1 cut(s) 1982
Eco130I CCWWGG 3 cut(s) 192, 387, 1854
Eco32I GATATC 1 cut(s) 183
Eco47I GGWCC 5 cut(s) 38, 466, 1271, 1282, 1419
Eco57I CTGAAG 2 cut(s) 698, 893
EcoO109I RGGNCCY 2 cut(s) 466, 1419
EcoRII CCWGG 2 cut(s) 63, 1524
EcoRV GATATC 1 cut(s) 183
EcoT14I CCWWGG 3 cut(s) 192, 387, 1854
EcoT22I ATGCAT 2 cut(s) 1068, 1473
ErhI CCWWGG 3 cut(s) 192, 387, 1854
Esp3I CGTCTC 3 cut(s) 419, 494, 1886
FaeI CATG 6 cut(s) 196, 656, 1066, 1070, 1258, 1910
FaqI GGGAC 1 cut(s) 1432
FatI CATG 6 cut(s) 192, 652, 1062, 1066, 1254, 1906
FauI CCCGC 1 cut(s) 1511
FauNDI CATATG 1 cut(s) 1015
Fnu4HI GCNGC 1 cut(s) 1252
FokI GGATG 6 cut(s) 100, 370, 1122, 1493, 1561, 1997
Fsp4HI GCNGC 1 cut(s) 1252
FspBI CTAG 6 cut(s) 20, 224, 1377, 1383, 1389, 1448
GluI GCNGC 1 cut(s) 1252
GsaI CCCAGC 1 cut(s) 1853
GsuI CTGGAG 1 cut(s) 443
HaeIII GGCC 5 cut(s) 48, 197, 899, 1081, 1658
HapII CCGG 3 cut(s) 1280, 1827, 1901
HgaI GACGC 2 cut(s) 672, 879
Hin1II CATG 6 cut(s) 196, 656, 1066, 1070, 1258, 1910
HincII GTYRAC 2 cut(s) 588, 608
HindII GTYRAC 2 cut(s) 588, 608
HpaI GTTAAC 1 cut(s) 588
HpaII CCGG 3 cut(s) 1280, 1827, 1901
HphI GGTGA 1 cut(s) 943
Hpy166II GTNNAC 6 cut(s) 588, 608, 1179, 1274, 1285, 1325
Hpy188III TCNNGA 7 cut(s) 130, 233, 285, 1240, 1591, 1827, 1907
Hpy8I GTNNAC 6 cut(s) 588, 608, 1179, 1274, 1285, 1325
Hpy99I CGWCG 1 cut(s) 895
HpyAV CCTTC 5 cut(s) 136, 962, 1207, 1361, 1597
HpyCH4III ACNGT 6 cut(s) 89, 605, 632, 1315, 1329, 1880
HpyCH4IV ACGT 3 cut(s) 428, 1046, 1615
HpyF10VI GCNNNNNNNGC 2 cut(s) 896, 1067
HpyF3I CTNAG 4 cut(s) 344, 1134, 1568, 1980
HpySE526I ACGT 3 cut(s) 428, 1046, 1615
Hsp92II CATG 6 cut(s) 196, 656, 1066, 1070, 1258, 1910
KflI GGGWCCC 1 cut(s) 1419
Kpn2I TCCGGA 1 cut(s) 1826
KspAI GTTAAC 1 cut(s) 588
Kzo9I GATC 3 cut(s) 110, 1125, 1571
LguI GCTCTTC 1 cut(s) 717
LmnI GCTCC 2 cut(s) 1829, 1969
Lsp1109I GCAGC 1 cut(s) 1263
LweI GCATC 4 cut(s) 198, 1458, 1480, 1515
MaeI CTAG 6 cut(s) 20, 224, 1377, 1383, 1389, 1448
MaeII ACGT 3 cut(s) 428, 1046, 1615
MaeIII GTNAC 6 cut(s) 89, 403, 805, 1009, 1112, 1550
MalI GATC 3 cut(s) 112, 1127, 1573
MboI GATC 3 cut(s) 110, 1125, 1571
MfeI CAATTG 1 cut(s) 1206
MflI RGATCY 1 cut(s) 1125
MhlI GDGCHC 2 cut(s) 418, 712
MlsI TGGCCA 4 cut(s) 197, 899, 1081, 1658
MluNI TGGCCA 4 cut(s) 197, 899, 1081, 1658
MlyI GAGTC 1 cut(s) 476
MmeI TCCRAC 1 cut(s) 1087
Mox20I TGGCCA 4 cut(s) 197, 899, 1081, 1658
Mph1103I ATGCAT 2 cut(s) 1068, 1473
MroI TCCGGA 1 cut(s) 1826
MroXI GAANNNNTTC 1 cut(s) 1895
MscI TGGCCA 4 cut(s) 197, 899, 1081, 1658
MseI TTAA 8 cut(s) 107, 587, 627, 1188, 1433, 1454, 1667, 2020
MslI CAYNNNNRTG 2 cut(s) 657, 1016
Msp20I TGGCCA 4 cut(s) 197, 899, 1081, 1658
MspI CCGG 3 cut(s) 1280, 1827, 1901
MspR9I CCNGG 3 cut(s) 65, 1526, 1901
MunI CAATTG 1 cut(s) 1206
MvaI CCWGG 2 cut(s) 65, 1526
MwoI GCNNNNNNNGC 2 cut(s) 896, 1067
NciI CCSGG 1 cut(s) 1901
NcoI CCATGG 1 cut(s) 192
NdeI CATATG 1 cut(s) 1015
NdeII GATC 3 cut(s) 110, 1125, 1571
NlaIII CATG 6 cut(s) 196, 656, 1066, 1070, 1258, 1910
NlaIV GGNNCC 4 cut(s) 975, 1373, 1420, 1421
NmuCI GTSAC 5 cut(s) 89, 403, 805, 1009, 1550
NsiI ATGCAT 2 cut(s) 1068, 1473
NspI RCATGY 1 cut(s) 1070
OliI CACNNNNGTG 1 cut(s) 1016
PaeI GCATGC 1 cut(s) 1070
PagI TCATGA 1 cut(s) 1906
PciSI GCTCTTC 1 cut(s) 717
PdmI GAANNNNTTC 1 cut(s) 1895
PfeI GAWTC 9 cut(s) 281, 857, 1166, 1217, 1444, 1564, 1594, 1859, 1913
PflMI CCANNNNNTGG 1 cut(s) 597
PkrI GCNGC 1 cut(s) 1253
PleI GAGTC 1 cut(s) 476
PpsI GAGTC 1 cut(s) 476
Ppu21I YACGTR 1 cut(s) 1047
PpuMI RGGWCCY 2 cut(s) 466, 1419
Psp5II RGGWCCY 2 cut(s) 466, 1419
Psp6I CCWGG 2 cut(s) 63, 1524
PspFI CCCAGC 1 cut(s) 1849
PspGI CCWGG 2 cut(s) 63, 1524
PspN4I GGNNCC 4 cut(s) 975, 1373, 1420, 1421
PspPI GGNCC 6 cut(s) 38, 47, 466, 1271, 1282, 1419
PspPPI RGGWCCY 2 cut(s) 466, 1419
PstNI CAGNNNCTG 1 cut(s) 1567
PsuI RGATCY 1 cut(s) 1125
RseI CAYNNNNRTG 2 cut(s) 657, 1016
SapI GCTCTTC 1 cut(s) 717
SaqAI TTAA 8 cut(s) 107, 587, 627, 1188, 1433, 1454, 1667, 2020
SatI GCNGC 1 cut(s) 1252
Sau3AI GATC 3 cut(s) 110, 1125, 1571
Sau96I GGNCC 6 cut(s) 38, 47, 466, 1271, 1282, 1419
ScaI AGTACT 4 cut(s) 691, 1381, 1387, 1637
SchI GAGTC 1 cut(s) 476
ScrFI CCNGG 3 cut(s) 65, 1526, 1901
SduI GDGCHC 2 cut(s) 418, 712
SfaNI GCATC 4 cut(s) 198, 1458, 1480, 1515
SfcI CTRYAG 1 cut(s) 1919
SinI GGWCC 5 cut(s) 38, 466, 1271, 1282, 1419
SmiMI CAYNNNNRTG 2 cut(s) 657, 1016
SmlI CTYRAG 1 cut(s) 569
SmoI CTYRAG 1 cut(s) 569
SpeI ACTAGT 1 cut(s) 1382
SphI GCATGC 1 cut(s) 1070
SsiI CCGC 6 cut(s) 4, 117, 1504, 1578, 1774, 1967
SspMI CTAG 6 cut(s) 20, 224, 1377, 1383, 1389, 1448
StyD4I CCNGG 3 cut(s) 63, 1524, 1899
StyI CCWWGG 3 cut(s) 192, 387, 1854
TaaI ACNGT 6 cut(s) 89, 605, 632, 1315, 1329, 1880
TaiI ACGT 3 cut(s) 431, 1049, 1618
TaqI TCGA 5 cut(s) 459, 815, 1145, 1362, 1953
TatI WGTACW 8 cut(s) 452, 649, 689, 745, 787, 1379, 1385, 1635
TfiI GAWTC 9 cut(s) 281, 857, 1166, 1217, 1444, 1564, 1594, 1859, 1913
Tru1I TTAA 8 cut(s) 107, 587, 627, 1188, 1433, 1454, 1667, 2020
Tru9I TTAA 8 cut(s) 107, 587, 627, 1188, 1433, 1454, 1667, 2020
TseFI GTSAC 5 cut(s) 89, 403, 805, 1009, 1550
TseI GCWGC 1 cut(s) 1251
Tsp45I GTSAC 5 cut(s) 89, 403, 805, 1009, 1550
TspDTI ATGAA 7 cut(s) 421, 669, 1179, 1209, 1380, 2001, 2006
TspGWI ACGGA 3 cut(s) 391, 1642, 1953
Van91I CCANNNNNTGG 1 cut(s) 597
VpaK11BI GGWCC 5 cut(s) 38, 466, 1271, 1282, 1419
XapI RAATTY 8 cut(s) 69, 103, 377, 542, 1513, 1530, 1749, 1993
XceI RCATGY 1 cut(s) 1070
XmnI GAANNNNTTC 1 cut(s) 1895
XspI CTAG 6 cut(s) 20, 224, 1377, 1383, 1389, 1448
ZrmI AGTACT 4 cut(s) 691, 1381, 1387, 1637
Zsp2I ATGCAT 2 cut(s) 1068, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.