Rw4G010740

Autophagy-related protein 11

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
25132164 .. 25138777
6614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G010740.1

Sequence Viewer

Length: 3435 bp
ATGAGTTCAAGTATCACCCAAGGCTTGGTTCATCAGGGCAAGCTTTTGGTTCATGTTGCTGAGAATGGGCACTCATTTGAGCTTGATTGTGAAGAAACCACACCGGTAGAGGCGGTTATGCGCTATATCGAATCAGTCTCTGATATTAATATCAATGACCAGCTCGTTCTGTGTTCTGATATGAAGCTTGAGCCGCAGCGCCCGCTCTCTGCTTATAAGCTTCCAGCTGATGGACAGGAAGTGTTTATATTCAATAAAGCGAGGCTGCAGACAAATTCATCCCCGCCTCCGCTGGAGCATGTTGACATTCTTGACATCGCCGAACCTCGATCACCCTCGGCTTCACACGATCGTCATCCTTTGGACGATGCTTCCGATCCTGCTTTGAAAGCCTTACCTTCTTATGAAAGGGAATTTAGGTTTCATTACCACAAGGGTCATGCGATTTACAGTCGAACCCAAGTGAAATATGACAATTGCGAGAGGCTTTTGAGGGAGCAAAAGGTTCAACAGAGGGCGGTGGAGGTTGCCAAGGGTAATTTGGATCAATACTATAGGATGATAAACCAGAACTATACAGAATTCATGAAGCGATATTCACATCAACATCGAATTCATTCTGATCTTTTGGTGAATCTGGGGAGGGATGTAGAAAAACTGAGATCCATCAAGCTTCATCCTGCGTTACAAACTGCCAACCGTAAATGCTTATCGGATTTTGTAAAGGAAGAGAACCTGAGGAAAGTGGGGGAGAATCGTACCAATTCCCATAAACTGTTTGAGAATAAGGTTTCACAGTTCAAGCAGATGTTTGGTGAGGTGAAGCGGAGAGTTGAGGAATTGTTTTCTAACGCGGCACCTCTGCCTATTAGGGATTGGGAACTGACAATTAAGGAGCACCAACGGTATATTAACGAGCAGAAGAGTATAATGCAGTCATTGAGCAAAGATGTAAATACCGTCAAGAAACTTGTGGATGATTGCTTGTCTTCCCAGTTGTCTTCCTCACTTCGTCCTCATGATGCGGTTTCAGCCTTGGGCCCTATGTATGATGTCCATGACAAAAATCACCTGCCTAGGATGCAGGCTTGTGATAATAAAATTTCCAAGCTACTTGAAGTTTGCAAGGATAAAAAGAATCAAATGAACATGTTTCTTCATAATTATATGCAAAAGATAACATATATCTCTTATATCATCAAAGATGCAAAGCTACAGTTTCCTGTTTTTAGAGAGGCAATGGTGCGCCAGGATGATTTGTTTTTTGAAATAAAGTTGGTTCGCGGGATTGGACCAGCATATAGAGCCTGCCTAGCAGAAATAGTAAGAAGAAAGGCTTCCCTAAAGCTCTACATGGGCATGGCTGGACAGTTAGCTGAGAGGCTTGCAACAAAGAGGGAGGCTGAGGTCAGGAGACGGGAGGAGTTTCTGAAAGTTCATAGTTCATACATACCCAGGGATGTATTAGCATCCATGGGTTTATATGATACCCCCAATCAGTGTGATGTCAATATAGCTCCTTTTGATACTGGTTTGCTTGATGTTGACATTTCAGACCTGGACCGTTATGCACCTGATTACTTGGCAGGACTGTCTTCTAAGGGTTCTTTTAGAGGTTCATATTCTATGTCTAATGAAAGCAGTCAATCAGCAGAGGCTGAGGAGCTTACATTGGATAGCCTTGAGAAATCTGAGGAGCTAATTGAAGGCAGTGAATTGGTAGAGATTGCTGGAACTAGTAAGATAGAAGTTGAGAATGCAAAATTGAAAGCTGAACTGGCTTCTGCAATAGCTGTGATTTGTTCATTCTGGCCTGAAGTAGACTTTGAATCATTGGATGACAGTAAAATGGATAATTTATTGAAGGATGCTGCAGAGAAAACAGCTGAAGCCTTGCACCTGAAAGATGAGTATGGAAAGCATTTGCAATCTATGCTTAGGACGAAGCAGCTGCAGTGTCTTTCGTATGAGAAACGCATTCAAGAATTGGAACAGAGACTATCTGATCAGTATTTGCAAGGTCAGAAGCTTTCAAATGATAAGGATGCCGCTGATTTTACCCTTTTGTCTGATAAGGTTGATAACTGCAAGCAAGAAGTCTTAGGTAGAGGAGATGCCCGCATGCCTTGCTTATCTAATTCTGAGCCCATGGATGAGGTTTCCTGCATCTCAAATTCTTTGGATGCCAAATTGGGTCTTTTCAATGCACAAGCTGATAAAATGCGAGATGGGGCTGATGAAAATATGATGGACTCTTCTGCAGTACATAATCATCAAATGGATTCATCAATGCAAGAGCTAAATCGTGAAGATCTGCTAGTCAGTGGTAAAGATGGCAAAGAAAAAATGGTGGGGCAGCTGGGCATGTCACTGACACACAGTTCTACTGCTGAAAGCATGCCTGAACATCTGAATGTGTCTCCTTGCGAAACCGCAGCTGACCCAGGCTTTGGCACCAAGGTCAGTACTGAGCTGTTGATGGAATTGGAAACTCTACTTGCAAACAAGTCAAACCAGTTGAACGAAACAGAGGTCAAGCTTAAAGCTTCTATGGAGGATGTTGCCATGCTTAAGAGGGAATTGGACACAAATAGGAAGCTCCTTGATGAATCTCAGATGAATTGTGCTCACTTGGAGAACTGTTTGCATGAAGCAAGAGAGGAAGCTCAAACCCATCTTTGTGCTGCTGATCGTAGGGCCTCAGAGTACAGTGCACTGCGAGCATCTGCTGTGAAAATGCGTGGCCTTTTTGAAAGGCTTCGGAGCTGTGTTAATGCCCAGGGAATGACTGGTTTTGTTGAGTCATTGCGCAGTTTAGCACAATCTCTGGGAAACTCTATCAATGACAATGAAGATGATGGTACTCTTGAGTTTCGGAAGTGTGTCCGGGTCCTCGCAGATAGAGTTGGTTTCTTGTCAAGGCACCGTGAAGAACTGCTTGACAAGTATCCGAAGGTTGAAGCGGCAAATGAACAACTTAGAAAAGAATTGGAAGAGAAGAAAGATCTGGTTAAAACATTGTACACAAAGCATCAACTCGAGAAACAGGCAAACAAGGAGAAGATATCTTTTGGCCGTTTGGAAGTCCATGAGATAGCCGCATTTGTTCTCAACACTGCTGGGCATTACGAGGCAATCAATAGAAATTGCTCTAACTATTATCTCTCTGCTGAATCTGTTGCCTTATTTACAGATCATCTCCCGCGTCAACCTAACTACATTGTTGGACAAATTGTGCATATTGAACGCCAGACTGTGAAGCCATCAGCTCCTATTTCAATTCGGCTTGAGCATGAGCTAACATCTGACACAGGGACTGACCGGTTGGCCTTGAATTCAGGATCAAACCCATATGGTCTCCCTATTGGCTGTGAATACTTCGTTGTGACAGTAGCCATGTTACCTGATACCATTCATTCACCACCTCCTTCCTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

1144

Amino Acids

129.62

Weight (kDa)

5.74

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATG17_like PF04108 147 - 484 8.2e-30 Autophagy protein ATG17-like domain
ATG11 PF10377 986 - 1133 2.6e-21 Autophagy-related protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 216
AarI CACCTGC 1 cut(s) 1080
Acc16I TGCGCA 1 cut(s) 2810
Acc36I ACCTGC 1 cut(s) 1080
AccB1I GGYRCC 3 cut(s) 856, 2453, 2922
AccB7I CCANNNNNTGG 3 cut(s) 25, 230, 2450
AccBSI CCGCTC 1 cut(s) 205
AccI GTMKAC 1 cut(s) 1821
AccII CGCG 3 cut(s) 854, 1284, 3205
AclWI GGATC 4 cut(s) 371, 552, 657, 3349
AcoI YGGCCR 1 cut(s) 3073
AcsI RAATTY 7 cut(s) 274, 413, 581, 612, 1101, 2173, 3334
AcuI CTGAAG 2 cut(s) 1836, 1908
AfaI GTAC 6 cut(s) 760, 2265, 2467, 2708, 2863, 3023
AfiI CCNNNNNNNGG 3 cut(s) 25, 230, 2450
AflII CTTAAG 1 cut(s) 2570
AflIII ACRYGT 1 cut(s) 1149
AgeI ACCGGT 2 cut(s) 103, 3321
AhlI ACTAGT 1 cut(s) 1736
AjnI CCWGG 5 cut(s) 1248, 1454, 1557, 2443, 2778
AjuI GAANNNNNNNTTGG 2 cut(s) 12, 44
Alw21I GWGCWC 3 cut(s) 900, 2629, 2716
Alw26I GTCTC 5 cut(s) 142, 1408, 1990, 2424, 3362
Alw44I GTGCAC 1 cut(s) 2712
AlwI GGATC 4 cut(s) 371, 552, 657, 3349
AlwNI CAGNNNCTG 3 cut(s) 140, 1658, 3317
Ama87I CYCGRG 1 cut(s) 3038
AoxI GGCC 6 cut(s) 1039, 1811, 2697, 2743, 3073, 3327
ApaI GGGCCC 1 cut(s) 1043
ApaLI GTGCAC 1 cut(s) 2712
ApeKI GCWGC 8 cut(s) 196, 265, 1871, 1948, 1951, 2356, 2435, 2684
ApoI RAATTY 7 cut(s) 274, 413, 581, 612, 1101, 2173, 3334
ArsI GACNNNNNNTTYG 4 cut(s) 2432, 2464, 2517, 2549
AseI ATTAAT 1 cut(s) 147
AsiGI ACCGGT 2 cut(s) 103, 3321
Asp700I GAANNNNTTC 3 cut(s) 616, 1336, 2757
AspA2I CCTAGG 1 cut(s) 1076
AspLEI GCGC 4 cut(s) 123, 201, 1248, 2811
AspS9I GGNCC 6 cut(s) 1039, 1040, 1292, 1561, 2697, 2890
AsuC2I CCSGG 1 cut(s) 2888
AsuHPI GGTGA 7 cut(s) 7, 324, 643, 827, 832, 1061, 3411
AvaI CYCGRG 1 cut(s) 3038
AvaII GGWCC 3 cut(s) 1292, 1561, 2890
AvrII CCTAGG 1 cut(s) 1076
AxyI CCTNAGG 1 cut(s) 737
BaeGI GKGCMC 3 cut(s) 72, 1043, 2716
BanI GGYRCC 3 cut(s) 856, 2453, 2922
BanII GRGCYC 2 cut(s) 1043, 2148
BbsI GAAGAC 3 cut(s) 981, 993, 1587
Bbv12I GWGCWC 3 cut(s) 900, 2629, 2716
BbvCI CCTCAGC 2 cut(s) 1404, 1659
BbvI GCAGC 8 cut(s) 208, 252, 1858, 1938, 1960, 2368, 2447, 2671
BccI CCATC 9 cut(s) 224, 674, 2222, 2242, 2327, 2473, 2682, 2852, 3271
BceAI ACGGC 1 cut(s) 3060
BcgI CGANNNNNNTGC 2 cut(s) 1933, 1967
BciT130I CCWGG 5 cut(s) 1250, 1456, 1559, 2445, 2780
BciVI GTATCC 1 cut(s) 2958
BclI TGATCA 1 cut(s) 2005
BcnI CCSGG 1 cut(s) 2888
BcoDI GTCTC 5 cut(s) 142, 1408, 1990, 2424, 3362
BcuI ACTAGT 1 cut(s) 1736
BfaI CTAG 4 cut(s) 1077, 1313, 1737, 2318
BfmI CTRYAG 6 cut(s) 266, 553, 1214, 1872, 1952, 2259
BfoI RGCGCY 1 cut(s) 202
BfrI CTTAAG 1 cut(s) 2570
BfuAI ACCTGC 1 cut(s) 1080
BfuI GTATCC 1 cut(s) 2958
BglII AGATCT 2 cut(s) 2311, 3004
BlnI CCTAGG 1 cut(s) 1076
BmcAI AGTACT 1 cut(s) 2467
Bme1390I CCNGG 6 cut(s) 1250, 1456, 1559, 2445, 2780, 2888
Bme18I GGWCC 3 cut(s) 1292, 1561, 2890
BmeT110I CYCGRG 1 cut(s) 3038
BmgT120I GGNCC 6 cut(s) 1039, 1040, 1292, 1561, 2697, 2890
BmiI GGNNCC 5 cut(s) 858, 1041, 2455, 2891, 2924
BmrFI CCNGG 6 cut(s) 1250, 1456, 1559, 2445, 2780, 2888
BmrI ACTGGG 1 cut(s) 988
BmuI ACTGGG 1 cut(s) 988
BpiI GAAGAC 3 cut(s) 981, 993, 1587
BpmI CTGGAG 1 cut(s) 314
Bpu10I CCTNAGC 3 cut(s) 1404, 1659, 1937
BpuEI CTTGAG 4 cut(s) 209, 1703, 2888, 3308
BpuMI CCSGG 1 cut(s) 2888
BsaBI GATNNNNATC 1 cut(s) 354
BsaI GGTCTC 1 cut(s) 3362
BsaWI WCCGGW 2 cut(s) 103, 3321
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 230, 2450
Bse118I RCCGGY 2 cut(s) 103, 3321
Bse1I ACTGG 5 cut(s) 994, 1534, 1782, 2515, 2794
Bse21I CCTNAGG 1 cut(s) 737
Bse3DI GCAATG 2 cut(s) 1245, 2804
Bse8I GATNNNNATC 1 cut(s) 354
BseBI CCWGG 5 cut(s) 1250, 1456, 1559, 2445, 2780
BseJI GATNNNNATC 1 cut(s) 354
BseLI CCNNNNNNNGG 3 cut(s) 25, 230, 2450
BseMI GCAATG 2 cut(s) 1245, 2804
BseNI ACTGG 5 cut(s) 994, 1534, 1782, 2515, 2794
BseRI GAGGAG 4 cut(s) 1436, 1676, 1709, 2124
BseSI GKGCMC 3 cut(s) 72, 1043, 2716
BseXI GCAGC 8 cut(s) 208, 252, 1858, 1938, 1960, 2368, 2447, 2671
BseYI CCCAGC 2 cut(s) 2359, 3119
Bsh1236I CGCG 3 cut(s) 854, 1284, 3205
Bsh1285I CGRYCG 1 cut(s) 352
BshFI GGCC 6 cut(s) 1041, 1813, 2699, 2745, 3075, 3329
BshNI GGYRCC 3 cut(s) 856, 2453, 2922
BshTI ACCGGT 2 cut(s) 103, 3321
BsiEI CGRYCG 1 cut(s) 352
BsiHKAI GWGCWC 3 cut(s) 900, 2629, 2716
BsiHKCI CYCGRG 1 cut(s) 3038
BsiSI CCGG 3 cut(s) 104, 2887, 3322
BslFI GGGAC 1 cut(s) 3328
BslI CCNNNNNNNGG 3 cut(s) 25, 230, 2450
BsmAI GTCTC 5 cut(s) 142, 1408, 1990, 2424, 3362
BsmBI CGTCTC 1 cut(s) 1408
BsmFI GGGAC 1 cut(s) 3328
BsmI GAATGC 2 cut(s) 1762, 1977
BsnI GGCC 6 cut(s) 1041, 1813, 2699, 2745, 3075, 3329
Bso31I GGTCTC 1 cut(s) 3362
BsoBI CYCGRG 1 cut(s) 3038
Bsp120I GGGCCC 1 cut(s) 1039
Bsp1286I GDGCHC 6 cut(s) 72, 900, 1043, 2148, 2629, 2716
Bsp1407I TGTACA 1 cut(s) 3021
Bsp19I CCATGG 2 cut(s) 1473, 2148
BspANI GGCC 6 cut(s) 1041, 1813, 2699, 2745, 3075, 3329
BspFNI CGCG 3 cut(s) 854, 1284, 3205
BspHI TCATGA 2 cut(s) 585, 1018
BspLI GGNNCC 5 cut(s) 858, 1041, 2455, 2891, 2924
BspMAI CTGCAG 4 cut(s) 270, 1876, 1956, 2263
BspMI ACCTGC 1 cut(s) 1080
BspPI GGATC 4 cut(s) 371, 552, 657, 3349
BspT107I GGYRCC 3 cut(s) 856, 2453, 2922
BspTI CTTAAG 1 cut(s) 2570
BspTNI GGTCTC 1 cut(s) 3362
BsrBI CCGCTC 1 cut(s) 205
BsrDI GCAATG 2 cut(s) 1245, 2804
BsrFI RCCGGY 2 cut(s) 103, 3321
BsrGI TGTACA 1 cut(s) 3021
BsrI ACTGG 5 cut(s) 994, 1534, 1782, 2515, 2794
BssAI RCCGGY 2 cut(s) 103, 3321
BssT1I CCWWGG 7 cut(s) 19, 531, 1035, 1076, 1473, 2148, 2457
Bst2UI CCWGG 5 cut(s) 1250, 1456, 1559, 2445, 2780
Bst6I CTCTTC 4 cut(s) 723, 917, 2260, 2988
BstAFI CTTAAG 1 cut(s) 2570
BstAPI GCANNNNNTGC 2 cut(s) 1933, 2127
BstAUI TGTACA 1 cut(s) 3021
BstDSI CCRYGG 2 cut(s) 1473, 2148
BstFNI CGCG 3 cut(s) 854, 1284, 3205
BstH2I RGCGCY 1 cut(s) 202
BstHHI GCGC 4 cut(s) 123, 201, 1248, 2811
BstMAI GTCTC 5 cut(s) 142, 1408, 1990, 2424, 3362
BstMCI CGRYCG 1 cut(s) 352
BstNI CCWGG 5 cut(s) 1250, 1456, 1559, 2445, 2780
BstNSI RCATGY 5 cut(s) 302, 1153, 2125, 2368, 2401
BstSCI CCNGG 6 cut(s) 1248, 1454, 1557, 2443, 2778, 2886
BstSFI CTRYAG 6 cut(s) 266, 553, 1214, 1872, 1952, 2259
BstSLI GKGCMC 3 cut(s) 72, 1043, 2716
BstUI CGCG 3 cut(s) 854, 1284, 3205
BstV1I GCAGC 8 cut(s) 208, 252, 1858, 1938, 1960, 2368, 2447, 2671
BstV2I GAAGAC 3 cut(s) 981, 993, 1587
BstX2I RGATCY 3 cut(s) 662, 2311, 3004
BstYI RGATCY 3 cut(s) 662, 2311, 3004
Bsu36I CCTNAGG 1 cut(s) 737
BsuI GTATCC 1 cut(s) 2958
BsuRI GGCC 6 cut(s) 1041, 1813, 2699, 2745, 3075, 3329
BtgI CCRYGG 2 cut(s) 1473, 2148
BtgZI GCGATG 1 cut(s) 301
BtsI GCAGTG 4 cut(s) 1717, 1961, 2714, 3114
BtsIMutI CAGTG 8 cut(s) 1505, 1717, 1961, 2329, 2369, 2714, 2716, 3114
BveI ACCTGC 1 cut(s) 1080
CaiI CAGNNNCTG 3 cut(s) 140, 1658, 3317
CciI TCATGA 2 cut(s) 585, 1018
CfoI GCGC 4 cut(s) 123, 201, 1248, 2811
Cfr10I RCCGGY 2 cut(s) 103, 3321
Cfr13I GGNCC 6 cut(s) 1039, 1040, 1292, 1561, 2697, 2890
CseI GACGC 1 cut(s) 3194
Csp6I GTAC 6 cut(s) 759, 2264, 2466, 2707, 2862, 3022
CspAI ACCGGT 2 cut(s) 103, 3321
CviQI GTAC 6 cut(s) 759, 2264, 2466, 2707, 2862, 3022
EaeI YGGCCR 1 cut(s) 3073
Eam1104I CTCTTC 4 cut(s) 723, 917, 2260, 2988
EarI CTCTTC 4 cut(s) 723, 917, 2260, 2988
Eco130I CCWWGG 7 cut(s) 19, 531, 1035, 1076, 1473, 2148, 2457
Eco24I GRGCYC 2 cut(s) 1043, 2148
Eco31I GGTCTC 1 cut(s) 3362
Eco32I GATATC 1 cut(s) 3066
Eco47I GGWCC 3 cut(s) 1292, 1561, 2890
Eco57I CTGAAG 2 cut(s) 1836, 1908
Eco81I CCTNAGG 1 cut(s) 737
Eco88I CYCGRG 1 cut(s) 3038
EcoO109I RGGNCCY 3 cut(s) 1040, 2697, 2890
EcoRI GAATTC 3 cut(s) 581, 612, 3334
EcoRII CCWGG 5 cut(s) 1248, 1454, 1557, 2443, 2778
EcoRV GATATC 1 cut(s) 3066
EcoT14I CCWWGG 7 cut(s) 19, 531, 1035, 1076, 1473, 2148, 2457
EcoT38I GRGCYC 2 cut(s) 1043, 2148
ErhI CCWWGG 7 cut(s) 19, 531, 1035, 1076, 1473, 2148, 2457
Esp3I CGTCTC 1 cut(s) 1408
FalI AAGNNNNNCTT 4 cut(s) 1321, 1353, 2922, 2954
FaqI GGGAC 1 cut(s) 3328
FauI CCCGC 5 cut(s) 210, 291, 1277, 2126, 3210
FauNDI CATATG 1 cut(s) 3352
FbaI TGATCA 1 cut(s) 2005
FblI GTMKAC 1 cut(s) 1821
FriOI GRGCYC 2 cut(s) 1043, 2148
FspBI CTAG 4 cut(s) 1077, 1313, 1737, 2318
FspI TGCGCA 1 cut(s) 2810
GlaI GCGC 4 cut(s) 122, 200, 1247, 2810
GsaI CCCAGC 2 cut(s) 2363, 3123
GsuI CTGGAG 1 cut(s) 314
HaeII RGCGCY 1 cut(s) 202
HaeIII GGCC 6 cut(s) 1041, 1813, 2699, 2745, 3075, 3329
HapII CCGG 3 cut(s) 104, 2887, 3322
HgaI GACGC 1 cut(s) 3194
HhaI GCGC 4 cut(s) 123, 201, 1248, 2811
Hin6I GCGC 4 cut(s) 121, 199, 1246, 2809
HinP1I GCGC 4 cut(s) 121, 199, 1246, 2809
HincII GTYRAC 3 cut(s) 304, 1546, 3209
HindII GTYRAC 3 cut(s) 304, 1546, 3209
HindIII AAGCTT 7 cut(s) 41, 185, 218, 671, 2027, 2537, 2544
HpaII CCGG 3 cut(s) 104, 2887, 3322
HphI GGTGA 7 cut(s) 7, 324, 643, 827, 832, 1061, 3411
Hpy166II GTNNAC 6 cut(s) 304, 1546, 1822, 2714, 3024, 3209
Hpy8I GTNNAC 6 cut(s) 304, 1546, 1822, 2714, 3024, 3209
HpyAV CCTTC 4 cut(s) 408, 1700, 1858, 2947
HspAI GCGC 4 cut(s) 121, 199, 1246, 2809
Ksp22I TGATCA 1 cut(s) 2005
LmnI GCTCC 9 cut(s) 295, 496, 895, 1522, 1663, 1696, 2604, 2763, 3274
Lsp1109I GCAGC 8 cut(s) 208, 252, 1858, 1938, 1960, 2368, 2447, 2671
MaeI CTAG 4 cut(s) 1077, 1313, 1737, 2318
MaeIII GTNAC 4 cut(s) 684, 2367, 3385, 3399
MbiI CCGCTC 1 cut(s) 205
MfeI CAATTG 1 cut(s) 475
MflI RGATCY 3 cut(s) 662, 2311, 3004
MhlI GDGCHC 6 cut(s) 72, 900, 1043, 2148, 2629, 2716
MlyI GAGTC 2 cut(s) 2246, 2810
MmeI TCCRAC 1 cut(s) 3205
MroXI GAANNNNTTC 3 cut(s) 616, 1336, 2757
MseI TTAA 7 cut(s) 147, 891, 912, 2541, 2571, 2772, 3012
MslI CAYNNNNRTG 3 cut(s) 1358, 2412, 2679
MspA1I CMGCKG 7 cut(s) 227, 292, 1886, 1951, 2051, 2359, 2438
MspCI CTTAAG 1 cut(s) 2570
MspI CCGG 3 cut(s) 104, 2887, 3322
MspR9I CCNGG 6 cut(s) 1250, 1456, 1559, 2445, 2780, 2888
MunI CAATTG 1 cut(s) 475
Mva1269I GAATGC 2 cut(s) 1762, 1977
MvaI CCWGG 5 cut(s) 1250, 1456, 1559, 2445, 2780
MvnI CGCG 3 cut(s) 854, 1284, 3205
NciI CCSGG 1 cut(s) 2888
NcoI CCATGG 2 cut(s) 1473, 2148
NdeI CATATG 1 cut(s) 3352
NlaIV GGNNCC 5 cut(s) 858, 1041, 2455, 2891, 2924
NmeAIII GCCGAG 1 cut(s) 317
NmuCI GTSAC 2 cut(s) 2367, 3385
NsbI TGCGCA 1 cut(s) 2810
NspI RCATGY 5 cut(s) 302, 1153, 2125, 2368, 2401
PaeI GCATGC 2 cut(s) 2125, 2401
PaeR7I CTCGAG 1 cut(s) 3038
PagI TCATGA 2 cut(s) 585, 1018
PaqCI CACCTGC 1 cut(s) 1080
PasI CCCWGGG 2 cut(s) 1455, 2779
PciI ACATGT 1 cut(s) 1149
PcsI WCGNNNNNNNCGW 1 cut(s) 372
PctI GAATGC 2 cut(s) 1762, 1977
PdmI GAANNNNTTC 3 cut(s) 616, 1336, 2757
PfeI GAWTC 8 cut(s) 131, 634, 754, 1138, 1829, 2282, 2609, 3173
PflMI CCANNNNNTGG 3 cut(s) 25, 230, 2450
PinAI ACCGGT 2 cut(s) 103, 3321
Ple19I CGATCG 1 cut(s) 352
PleI GAGTC 2 cut(s) 2246, 2809
PpsI GAGTC 2 cut(s) 2246, 2809
PpuMI RGGWCCY 1 cut(s) 2890
PscI ACATGT 1 cut(s) 1149
PshBI ATTAAT 1 cut(s) 147
PsiI TTATAA 1 cut(s) 216
Psp5II RGGWCCY 1 cut(s) 2890
Psp6I CCWGG 5 cut(s) 1248, 1454, 1557, 2443, 2778
PspFI CCCAGC 2 cut(s) 2359, 3119
PspGI CCWGG 5 cut(s) 1248, 1454, 1557, 2443, 2778
PspN4I GGNNCC 5 cut(s) 858, 1041, 2455, 2891, 2924
PspOMI GGGCCC 1 cut(s) 1039
PspPI GGNCC 6 cut(s) 1039, 1040, 1292, 1561, 2697, 2890
PspPPI RGGWCCY 1 cut(s) 2890
PstI CTGCAG 4 cut(s) 270, 1876, 1956, 2263
PstNI CAGNNNCTG 3 cut(s) 140, 1658, 3317
PsuI RGATCY 3 cut(s) 662, 2311, 3004
PvuI CGATCG 1 cut(s) 352
PvuII CAGCTG 5 cut(s) 227, 1886, 1951, 2359, 2438
RsaI GTAC 6 cut(s) 760, 2265, 2467, 2708, 2863, 3023
RsaNI GTAC 6 cut(s) 759, 2264, 2466, 2707, 2862, 3022
RseI CAYNNNNRTG 3 cut(s) 1358, 2412, 2679
SaqAI TTAA 7 cut(s) 147, 891, 912, 2541, 2571, 2772, 3012
Sau96I GGNCC 6 cut(s) 1039, 1040, 1292, 1561, 2697, 2890
ScaI AGTACT 1 cut(s) 2467
SchI GAGTC 2 cut(s) 2246, 2810
ScrFI CCNGG 6 cut(s) 1250, 1456, 1559, 2445, 2780, 2888
SduI GDGCHC 6 cut(s) 72, 900, 1043, 2148, 2629, 2716
SfcI CTRYAG 6 cut(s) 266, 553, 1214, 1872, 1952, 2259
Sfr274I CTCGAG 1 cut(s) 3038
SinI GGWCC 3 cut(s) 1292, 1561, 2890
SlaI CTCGAG 1 cut(s) 3038
SmiMI CAYNNNNRTG 3 cut(s) 1358, 2412, 2679
SmlI CTYRAG 6 cut(s) 188, 1682, 2570, 2867, 3038, 3287
SmoI CTYRAG 6 cut(s) 188, 1682, 2570, 2867, 3038, 3287
SpeI ACTAGT 1 cut(s) 1736
SphI GCATGC 2 cut(s) 2125, 2401
SspMI CTAG 4 cut(s) 1077, 1313, 1737, 2318
StyD4I CCNGG 6 cut(s) 1248, 1454, 1557, 2443, 2778, 2886
StyI CCWWGG 7 cut(s) 19, 531, 1035, 1076, 1473, 2148, 2457
TaqI TCGA 5 cut(s) 129, 328, 454, 610, 3039
TatI WGTACW 4 cut(s) 2263, 2465, 2706, 3021
TauI GCSGC 5 cut(s) 196, 857, 2051, 2966, 3101
TfiI GAWTC 8 cut(s) 131, 634, 754, 1138, 1829, 2282, 2609, 3173
Tru1I TTAA 7 cut(s) 147, 891, 912, 2541, 2571, 2772, 3012
Tru9I TTAA 7 cut(s) 147, 891, 912, 2541, 2571, 2772, 3012
TscAI CASTG 8 cut(s) 1505, 1717, 1961, 2329, 2376, 2716, 2721, 3121
TseFI GTSAC 2 cut(s) 2367, 3385
TseI GCWGC 8 cut(s) 196, 265, 1871, 1948, 1951, 2356, 2435, 2684
Tsp45I GTSAC 2 cut(s) 2367, 3385
TspRI CASTG 8 cut(s) 1505, 1717, 1961, 2329, 2376, 2716, 2721, 3121
Van91I CCANNNNNTGG 3 cut(s) 25, 230, 2450
Vha464I CTTAAG 1 cut(s) 2570
VneI GTGCAC 1 cut(s) 2712
VpaK11BI GGWCC 3 cut(s) 1292, 1561, 2890
VspI ATTAAT 1 cut(s) 147
XapI RAATTY 7 cut(s) 274, 413, 581, 612, 1101, 2173, 3334
XceI RCATGY 5 cut(s) 302, 1153, 2125, 2368, 2401
XcmI CCANNNNNNNNNTGG 2 cut(s) 538, 2786
XhoI CTCGAG 1 cut(s) 3038
XmaJI CCTAGG 1 cut(s) 1076
XmiI GTMKAC 1 cut(s) 1821
XmnI GAANNNNTTC 3 cut(s) 616, 1336, 2757
XspI CTAG 4 cut(s) 1077, 1313, 1737, 2318
ZrmI AGTACT 1 cut(s) 2467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.