pycom04g07280

Protein of unknown function (DUF 659)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
7673718 .. 7677680
3963 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g07280.2

Sequence Viewer

Length: 2124 bp
ATGAAGTTTCACTTAGCTCAAATTAAAAACAAAGATATAGTCCCCTGCACAGAAGTTCCGACTGATGTGCGGGGTAACATTTTAAGCATAATAAGCACTCCAAAGAAACAGAAAACTCCCAAGAAACCAAAGGTTGATAAGGCACTTGCAGCCAATGGTCAACAGAATAGCTCCTCTGCTAGTGGTGGCTTCCATCCTAACCATGGGACTAGCGGACAGAATGGAAGCACATCCCCGTCTTTGTTGTTTCCGTGCCCTTCACCGGTGGCACACCTAGAAGTGGGTGATGCTCAAAAGCAAAAGCAGGATGTTGCTGATAAAAAAATTGCTGTGTTTTTCATCCACAATTCTGTCCCTTTTAGTGCTGCTAAATCCATATATTATCAGGAAATGGTGGATGCTATAGCAGATTGTGGGGTGGACTATAAAGCTCCAAGCTACGAAAGCCTACGATCTTCTCTTCTGGAAAAAGTCAAAGGTGATATACATGATTGCTACAAGAAATGCAGAGATGAATGGAAAGAAACAGGTTGCACTATCTTATGTGATAGCTGGTCTGATGGTAGGAACAAATCACTTGTAATATTCTCAGTTACATATCCGAAGGGAACTCTGTTTCTGAAGTCAGTTGATGTATCGGGTCATGAAGACGATGCTACTTACTTGTTTGAGCTGATTGAGTCTGTTGTCTTGGAGGTAGGTGTTGAGAATGTTGTGCAAGTTATAACGAATACTACTGCCAGTTATGTTTACGCAGGAAGACTTCTTATGGCCAAGTACAACTCATTGTTTTGGTCTCCTTGTGCGTCTTATTGTATTAATAAGATGCTGGAGGATATCAGTAAACAGGAGTGGGTAGCTACAGTTCTGGAAGAGGCAAAGACCATCACTAGGTTCCTATACAGTCATCCATGGACTTTGAGTACGATGGGAAAATTCACTGGTGGAATGGAATTGCTAAGGCCAAAAATTACTAGATTCGTGACTAATTTCCTCACCTTGAGGTCCATTGTGATTCAGGAGGACAATCTAAAGCACATGTTTTCCATGTCTTCAGTATACAGTAGACACCCTGAGGCTCAAGCTATTAAGTCGTCGTTGTATTTAGAGAGATTTTGGAAGCATGCACGAGAAGCTGTGAGTATTTCTGAACCGCTACTTAAAATCCTTAGGGTTGTTGACGGGGATATGCCAGCTATGGGGTACATGTATGAAGGAATAGAGAGGGCAAAAGTTGCAATAAAGACCCATTATAAGGGTATCGAAGAGAAATATATGCTGATCTGGGATATAATTGATCAGAGATGGAATATGCAGCTTCACTCATCCTTGCATGCAGCGGCAGCTTCCCTTAACCCTTCGGTATTCTACAGTCCAAACTTTAAGATTGATTTAAGGATGAGAAATGGATTTCAAGAAACTATGTTGAGGATGGCTACCACACATGACGATAGAATGGAAGTAACAAAAGAACATCCTATGTATGTTAATGCACAAGGTGCTTTTGGGACGGATTTTGCAATCCTGGGAAGGACACTGAATTCCCCAGGAGATTGGTGGGCAGGTTATGGTTATGAAATTCCCACAATCCAGAGATGTGCAATACGGATACTGAGCCAACCATGTAGCTCCCATTGGTGCTGTTGGAACTGGACCACCTTCGAGAGCATGCACAGCAAGAAACACAACCGAGGAGAGCTGGAAAAATTCAATGATCTGGTTTTCGTACACTGCAACCTTTGGTTGCAGTCTATTTATCACCACAGAGATGGGAAATGCAAACCCATTGTGTTTGATGAAGTAGATGTAAGTTCTCAATGGCCTACTGAGTTGGATTCTTCTGCCCCACTTTTGGATGATTCATGGCTGGACAACTTACCCCTTGAATGTAGAGTGAGGGCGTCGAGAGTGCTGGACTTGTTCGAGAAGGCCAAGTTGAAGGCGTCGTGTATTGTGTTCATTGATGAGATAGATGAGGTGGGGAGGCAGAGAGGCGGGGATGGGCGGCGAGAGGGAAGGCCGGATGTTCTTGGTTCGGCGTTGTTGAGGCCTGGGAGGTTTGACCGACAGGTGACTGTCGCCAAGCCTGATGTTGATGGCAAAGTTTTTTCTTTTATTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

708

Amino Acids

80.07

Weight (kDa)

7.8

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 725, 1254
Acc36I ACCTGC 1 cut(s) 1553
AccI GTMKAC 2 cut(s) 1059, 1066
AciI CCGC 6 cut(s) 70, 213, 1154, 1340, 1995, 2005
AcoI YGGCCR 1 cut(s) 771
AcsI RAATTY 4 cut(s) 935, 1540, 1578, 1706
AcuI CTGAAG 2 cut(s) 641, 1038
AcyI GRCGYC 2 cut(s) 1901, 1943
AdeI CACNNNGTG 1 cut(s) 1499
AfaI GTAC 4 cut(s) 779, 925, 1205, 1728
AfiI CCNNNNNNNGG 7 cut(s) 203, 262, 280, 891, 1199, 1255, 1852
AflIII ACRYGT 2 cut(s) 1038, 1206
AgeI ACCGGT 1 cut(s) 262
AgsI TTSAA 4 cut(s) 1415, 1711, 1886, 1939
AjnI CCWGG 3 cut(s) 1524, 1546, 2050
Alw26I GTCTC 1 cut(s) 801
AoxI GGCC 6 cut(s) 771, 962, 1820, 1929, 2018, 2048
ApeKI GCWGC 5 cut(s) 149, 365, 1315, 1337, 1343
ApoI RAATTY 4 cut(s) 935, 1540, 1578, 1706
ArsI GACNNNNNNTTYG 2 cut(s) 24, 56
AseI ATTAAT 1 cut(s) 819
AsiGI ACCGGT 1 cut(s) 262
AspS9I GGNCC 2 cut(s) 1005, 1653
AsuHPI GGTGA 6 cut(s) 252, 296, 491, 988, 1751, 2083
AvaII GGWCC 2 cut(s) 1005, 1653
AxyI CCTNAGG 2 cut(s) 1074, 1169
BaeGI GKGCMC 1 cut(s) 257
BalI TGGCCA 1 cut(s) 773
BauI CACGAG 1 cut(s) 1128
BbsI GAAGAC 3 cut(s) 654, 766, 1044
BbvI GCAGC 5 cut(s) 161, 352, 1327, 1349, 1355
BccI CCATC 9 cut(s) 201, 554, 893, 922, 1299, 1426, 1763, 1994, 2090
BcgI CGANNNNNNTGC 2 cut(s) 49, 83
BciT130I CCWGG 3 cut(s) 1526, 1548, 2052
BciVI GTATCC 1 cut(s) 1602
BclI TGATCA 1 cut(s) 1297
BcoDI GTCTC 1 cut(s) 801
BfaI CTAG 5 cut(s) 180, 210, 275, 891, 975
BfmI CTRYAG 3 cut(s) 402, 861, 1369
BfuAI ACCTGC 1 cut(s) 1553
BfuI GTATCC 1 cut(s) 1602
BisI GCNGC 7 cut(s) 150, 366, 1316, 1338, 1341, 1344, 2006
BlsI GCNGC 7 cut(s) 151, 367, 1317, 1339, 1342, 1345, 2007
Bme1390I CCNGG 3 cut(s) 1526, 1548, 2052
Bme18I GGWCC 2 cut(s) 1005, 1653
BmgT120I GGNCC 2 cut(s) 1005, 1653
BmiI GGNNCC 1 cut(s) 896
BmrFI CCNGG 3 cut(s) 1526, 1548, 2052
BmsI GCATC 4 cut(s) 277, 388, 643, 816
BpiI GAAGAC 3 cut(s) 654, 766, 1044
BpmI CTGGAG 1 cut(s) 851
Bpu10I CCTNAGC 1 cut(s) 959
BpuEI CTTGAG 2 cut(s) 1021, 1065
BsaHI GRCGYC 2 cut(s) 1901, 1943
BsaI GGTCTC 1 cut(s) 801
BsaJI CCNNGG 6 cut(s) 202, 911, 1525, 1546, 1690, 2051
BsaWI WCCGGW 1 cut(s) 262
Bsc4I CCNNNNNNNGG 7 cut(s) 203, 262, 280, 891, 1199, 1255, 1852
Bse118I RCCGGY 1 cut(s) 262
Bse1I ACTGG 3 cut(s) 741, 946, 1655
Bse21I CCTNAGG 2 cut(s) 1074, 1169
BseBI CCWGG 3 cut(s) 1526, 1548, 2052
BseDI CCNNGG 6 cut(s) 202, 911, 1525, 1546, 1690, 2051
BseLI CCNNNNNNNGG 7 cut(s) 203, 262, 280, 891, 1199, 1255, 1852
BseMII CTCAG 4 cut(s) 603, 1065, 1604, 1818
BseNI ACTGG 3 cut(s) 741, 946, 1655
BseRI GAGGAG 2 cut(s) 163, 1707
BseSI GKGCMC 1 cut(s) 257
BseXI GCAGC 5 cut(s) 161, 352, 1327, 1349, 1355
BsgI GTGCAG 1 cut(s) 31
BshFI GGCC 6 cut(s) 773, 964, 1822, 1931, 2020, 2050
BshTI ACCGGT 1 cut(s) 262
BsiSI CCGG 2 cut(s) 263, 2021
BslFI GGGAC 4 cut(s) 26, 220, 338, 1522
BslI CCNNNNNNNGG 7 cut(s) 203, 262, 280, 891, 1199, 1255, 1852
BsmAI GTCTC 1 cut(s) 801
BsmFI GGGAC 4 cut(s) 26, 220, 338, 1522
BsnI GGCC 6 cut(s) 773, 964, 1822, 1931, 2020, 2050
Bso31I GGTCTC 1 cut(s) 801
Bsp1286I GDGCHC 1 cut(s) 257
Bsp143I GATC 4 cut(s) 452, 1281, 1297, 1714
Bsp19I CCATGG 2 cut(s) 202, 911
BspACI CCGC 6 cut(s) 70, 213, 1154, 1340, 1995, 2005
BspANI GGCC 6 cut(s) 773, 964, 1822, 1931, 2020, 2050
BspCNI CTCAG 4 cut(s) 602, 1066, 1605, 1819
BspHI TCATGA 1 cut(s) 643
BspLI GGNNCC 1 cut(s) 896
BspMI ACCTGC 1 cut(s) 1553
BspTNI GGTCTC 1 cut(s) 801
BsrFI RCCGGY 1 cut(s) 262
BsrI ACTGG 3 cut(s) 741, 946, 1655
BssAI RCCGGY 1 cut(s) 262
BssECI CCNNGG 6 cut(s) 202, 911, 1525, 1546, 1690, 2051
BssMI GATC 4 cut(s) 452, 1281, 1297, 1714
BssNAI GTATAC 1 cut(s) 1060
BssNI GRCGYC 2 cut(s) 1901, 1943
BssSI CACGAG 1 cut(s) 1128
BssT1I CCWWGG 2 cut(s) 202, 911
Bst1107I GTATAC 1 cut(s) 1060
Bst2BI CACGAG 1 cut(s) 1128
Bst2UI CCWGG 3 cut(s) 1526, 1548, 2052
Bst4CI ACNGT 5 cut(s) 865, 905, 1064, 1373, 2077
Bst6I CTCTTC 3 cut(s) 465, 867, 1260
BstACI GRCGYC 2 cut(s) 1901, 1943
BstAPI GCANNNNNTGC 2 cut(s) 1235, 1499
BstC8I GCNNGC 4 cut(s) 1125, 1194, 1335, 1670
BstDEI CTNAG 7 cut(s) 13, 589, 959, 1074, 1169, 1613, 1827
BstDSI CCRYGG 2 cut(s) 202, 911
BstKTI GATC 4 cut(s) 455, 1284, 1300, 1717
BstMAI GTCTC 1 cut(s) 801
BstMBI GATC 4 cut(s) 452, 1281, 1297, 1714
BstMWI GCNNNNNNNGC 8 cut(s) 93, 149, 444, 1133, 1235, 1343, 1499, 1674
BstNI CCWGG 3 cut(s) 1526, 1548, 2052
BstNSI RCATGY 5 cut(s) 1042, 1127, 1210, 1337, 1672
BstSCI CCNGG 3 cut(s) 1524, 1546, 2050
BstSFI CTRYAG 3 cut(s) 402, 861, 1369
BstSLI GKGCMC 1 cut(s) 257
BstV1I GCAGC 5 cut(s) 161, 352, 1327, 1349, 1355
BstV2I GAAGAC 3 cut(s) 654, 766, 1044
BstXI CCANNNNNNTGG 2 cut(s) 1554, 1769
BstZ17I GTATAC 1 cut(s) 1060
Bsu36I CCTNAGG 2 cut(s) 1074, 1169
BsuI GTATCC 1 cut(s) 1602
BsuRI GGCC 6 cut(s) 773, 964, 1822, 1931, 2020, 2050
BtgI CCRYGG 2 cut(s) 202, 911
BtsI GCAGTG 1 cut(s) 1729
BtsIMutI CAGTG 3 cut(s) 939, 1535, 1729
BveI ACCTGC 1 cut(s) 1553
Cac8I GCNNGC 4 cut(s) 1125, 1194, 1335, 1670
CciI TCATGA 1 cut(s) 643
Cfr10I RCCGGY 1 cut(s) 262
Cfr13I GGNCC 2 cut(s) 1005, 1653
CseI GACGC 3 cut(s) 795, 1890, 1932
Csp6I GTAC 4 cut(s) 778, 924, 1204, 1727
CspAI ACCGGT 1 cut(s) 262
CviQI GTAC 4 cut(s) 778, 924, 1204, 1727
DdeI CTNAG 7 cut(s) 13, 589, 959, 1074, 1169, 1613, 1827
DpnI GATC 4 cut(s) 454, 1283, 1299, 1716
DpnII GATC 4 cut(s) 452, 1281, 1297, 1714
DraIII CACNNNGTG 1 cut(s) 1499
EaeI YGGCCR 1 cut(s) 771
Eam1104I CTCTTC 3 cut(s) 465, 867, 1260
EarI CTCTTC 3 cut(s) 465, 867, 1260
Eco130I CCWWGG 2 cut(s) 202, 911
Eco147I AGGCCT 1 cut(s) 2050
Eco31I GGTCTC 1 cut(s) 801
Eco32I GATATC 1 cut(s) 838
Eco47I GGWCC 2 cut(s) 1005, 1653
Eco57I CTGAAG 2 cut(s) 641, 1038
Eco81I CCTNAGG 2 cut(s) 1074, 1169
EcoRI GAATTC 1 cut(s) 1540
EcoRII CCWGG 3 cut(s) 1524, 1546, 2050
EcoRV GATATC 1 cut(s) 838
EcoT14I CCWWGG 2 cut(s) 202, 911
ErhI CCWWGG 2 cut(s) 202, 911
FalI AAGNNNNNCTT 1 cut(s) 28
FaqI GGGAC 4 cut(s) 26, 220, 338, 1522
FauI CCCGC 2 cut(s) 63, 1988
FbaI TGATCA 1 cut(s) 1297
FblI GTMKAC 2 cut(s) 1059, 1066
Fnu4HI GCNGC 7 cut(s) 150, 366, 1316, 1338, 1341, 1344, 2006
Fsp4HI GCNGC 7 cut(s) 150, 366, 1316, 1338, 1341, 1344, 2006
FspBI CTAG 5 cut(s) 180, 210, 275, 891, 975
GluI GCNGC 7 cut(s) 150, 366, 1316, 1338, 1341, 1344, 2006
GsuI CTGGAG 1 cut(s) 851
HaeIII GGCC 6 cut(s) 773, 964, 1822, 1931, 2020, 2050
HapII CCGG 2 cut(s) 263, 2021
HgaI GACGC 3 cut(s) 795, 1890, 1932
Hin1I GRCGYC 2 cut(s) 1901, 1943
HincII GTYRAC 2 cut(s) 161, 1180
HindII GTYRAC 2 cut(s) 161, 1180
HinfI GANTC 5 cut(s) 680, 978, 1015, 1835, 1859
HpaII CCGG 2 cut(s) 263, 2021
HphI GGTGA 6 cut(s) 252, 296, 491, 988, 1751, 2083
Hpy166II GTNNAC 8 cut(s) 161, 421, 751, 845, 1060, 1067, 1180, 1729
Hpy188I TCNGA 6 cut(s) 60, 559, 603, 621, 1150, 1302
Hpy8I GTNNAC 8 cut(s) 161, 421, 751, 845, 1060, 1067, 1180, 1729
Hpy99I CGWCG 3 cut(s) 1099, 1906, 1948
HpyAV CCTTC 9 cut(s) 267, 598, 1208, 1368, 1524, 1669, 1921, 1933, 2010
HpyCH4III ACNGT 5 cut(s) 865, 905, 1064, 1373, 2077
HpyF10VI GCNNNNNNNGC 8 cut(s) 93, 149, 444, 1133, 1235, 1343, 1499, 1674
HpyF3I CTNAG 7 cut(s) 13, 589, 959, 1074, 1169, 1613, 1827
Hsp92I GRCGYC 2 cut(s) 1901, 1943
Ksp22I TGATCA 1 cut(s) 1297
Kzo9I GATC 4 cut(s) 452, 1281, 1297, 1714
LmnI GCTCC 3 cut(s) 176, 436, 1634
Lsp1109I GCAGC 5 cut(s) 161, 352, 1327, 1349, 1355
LweI GCATC 4 cut(s) 277, 388, 643, 816
MaeI CTAG 5 cut(s) 180, 210, 275, 891, 975
MaeIII GTNAC 5 cut(s) 74, 592, 982, 1462, 2071
MalI GATC 4 cut(s) 454, 1283, 1299, 1716
MboI GATC 4 cut(s) 452, 1281, 1297, 1714
MboII GAAGA 8 cut(s) 447, 452, 659, 771, 884, 1044, 1277, 1830
MhlI GDGCHC 1 cut(s) 257
MlsI TGGCCA 1 cut(s) 773
MluNI TGGCCA 1 cut(s) 773
MlyI GAGTC 1 cut(s) 689
MmeI TCCRAC 3 cut(s) 83, 1625, 1812
Mox20I TGGCCA 1 cut(s) 773
MscI TGGCCA 1 cut(s) 773
MslI CAYNNNNRTG 1 cut(s) 1767
Msp20I TGGCCA 1 cut(s) 773
MspA1I CMGCKG 1 cut(s) 1340
MspI CCGG 2 cut(s) 263, 2021
MspR9I CCNGG 3 cut(s) 1526, 1548, 2052
MvaI CCWGG 3 cut(s) 1526, 1548, 2052
MwoI GCNNNNNNNGC 8 cut(s) 93, 149, 444, 1133, 1235, 1343, 1499, 1674
NcoI CCATGG 2 cut(s) 202, 911
NdeII GATC 4 cut(s) 452, 1281, 1297, 1714
NlaIV GGNNCC 1 cut(s) 896
NmuCI GTSAC 2 cut(s) 982, 2071
NspI RCATGY 5 cut(s) 1042, 1127, 1210, 1337, 1672
PaeI GCATGC 3 cut(s) 1127, 1337, 1672
PagI TCATGA 1 cut(s) 643
PceI AGGCCT 1 cut(s) 2050
PciI ACATGT 2 cut(s) 1038, 1206
PfeI GAWTC 4 cut(s) 978, 1015, 1835, 1859
PinAI ACCGGT 1 cut(s) 262
PkrI GCNGC 7 cut(s) 151, 367, 1317, 1339, 1342, 1345, 2007
PleI GAGTC 1 cut(s) 688
PpsI GAGTC 1 cut(s) 688
PscI ACATGT 2 cut(s) 1038, 1206
PshBI ATTAAT 1 cut(s) 819
PsiI TTATAA 2 cut(s) 725, 1254
Psp6I CCWGG 3 cut(s) 1524, 1546, 2050
PspGI CCWGG 3 cut(s) 1524, 1546, 2050
PspN4I GGNNCC 1 cut(s) 896
PspPI GGNCC 2 cut(s) 1005, 1653
PsrI GAACNNNNNNTAC 2 cut(s) 849, 881
RsaI GTAC 4 cut(s) 779, 925, 1205, 1728
RsaNI GTAC 4 cut(s) 778, 924, 1204, 1727
RseI CAYNNNNRTG 1 cut(s) 1767
SatI GCNGC 7 cut(s) 150, 366, 1316, 1338, 1341, 1344, 2006
Sau3AI GATC 4 cut(s) 452, 1281, 1297, 1714
Sau96I GGNCC 2 cut(s) 1005, 1653
SchI GAGTC 1 cut(s) 689
ScrFI CCNGG 3 cut(s) 1526, 1548, 2052
SduI GDGCHC 1 cut(s) 257
SfaNI GCATC 4 cut(s) 277, 388, 643, 816
SfcI CTRYAG 3 cut(s) 402, 861, 1369
SgrAI CRCCGGYG 1 cut(s) 262
SinI GGWCC 2 cut(s) 1005, 1653
SmiMI CAYNNNNRTG 1 cut(s) 1767
SmlI CTYRAG 2 cut(s) 1000, 1080
SmoI CTYRAG 2 cut(s) 1000, 1080
SphI GCATGC 3 cut(s) 1127, 1337, 1672
SseBI AGGCCT 1 cut(s) 2050
SsiI CCGC 6 cut(s) 70, 213, 1154, 1340, 1995, 2005
SspI AATATT 1 cut(s) 585
SspMI CTAG 5 cut(s) 180, 210, 275, 891, 975
StuI AGGCCT 1 cut(s) 2050
StyD4I CCNGG 3 cut(s) 1524, 1546, 2050
StyI CCWWGG 2 cut(s) 202, 911
TaaI ACNGT 5 cut(s) 865, 905, 1064, 1373, 2077
TaqI TCGA 4 cut(s) 1263, 1662, 1904, 1923
TaqII GACCGA 1 cut(s) 2079
TatI WGTACW 1 cut(s) 777
TauI GCSGC 2 cut(s) 1343, 2008
TfiI GAWTC 4 cut(s) 978, 1015, 1835, 1859
TscAI CASTG 3 cut(s) 946, 1542, 1736
TseFI GTSAC 2 cut(s) 982, 2071
TseI GCWGC 5 cut(s) 149, 365, 1315, 1337, 1343
Tsp45I GTSAC 2 cut(s) 982, 2071
TspDTI ATGAA 9 cut(s) 17, 328, 528, 660, 1227, 1590, 1812, 1851, 1948
TspGWI ACGGA 3 cut(s) 240, 1526, 1621
TspRI CASTG 3 cut(s) 946, 1542, 1736
VpaK11BI GGWCC 2 cut(s) 1005, 1653
VspI ATTAAT 1 cut(s) 819
XapI RAATTY 4 cut(s) 935, 1540, 1578, 1706
XceI RCATGY 5 cut(s) 1042, 1127, 1210, 1337, 1672
XcmI CCANNNNNNNNNTGG 2 cut(s) 200, 1554
XmiI GTMKAC 2 cut(s) 1059, 1066
XspI CTAG 5 cut(s) 180, 210, 275, 891, 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.