Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004558

Physical Location & Seq

Genomic Coordinates Reverse (-)

17671539 .. 17675068

Gene Structure 3530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G017040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGTTCGAGGAAGAGATGCCTGTTGGGAGCACTGTGTCCTTGTTGATGCAACAAAGCAGAAGGTTAGGTGTAATTATTGTCAACGGGAGTTTAGTGGAGGGGTATACAGGATGAAGTTTCATTTAGCTCAAATAAAAAACAAAGATATAGTCCCCTGCACAGAAGTCCCAACTGATGTGCGAGATCACATTTTAAGTATATTAGAAACTCCAAAGAAACAGAAAACTCCCAAGAAACTGAAAGTGGATAAAGCAGCTCTAGCCAATGGTCAACAAAATAGCTCTTCTGCTAGTGGTGACTTCCATCCTAACTATGCCTCTAATGGACAGAATGGAAGCACCTGCCCATCTTTGTTATTCCTATGTCCATCACCAACTTCACAGCAACCAGTGGACGATGTTCAAAAGCAAAAGCAGGATCTTGCTGATAAAAGAGTTGCTGTGTTTTTCTTCCACAATTCTATTCCATTTAGCGCTGCTAGGTCCGTATATTATCGGGAAATGGTGGATGCTGTAGCAGACTGTGGGAGGAATTACAAAGCCCCGAGCTATGAAGTACTGAGATCCACTCTGTTGGAAAAAGTGAAAAGTGATATACATGATTGCTACAAGAAATATAGAGATGAATGGAAAGAAACAGGTTGCACTATCTTATGTGAGAGCTGGTCTGATGGTAGGAACAAGTCACTTGTCATATTCTCAGTTACGTGCCCCAAGGGGACCCTGTTTCTGAAGTCTGTTGATTTATCAGGTCATGAAGATGATGCTCCGTACTTGTTTGAGCTGTTCGAGTCTGTTGTCTTGGAAGTTGGTGTTGAAAATGTTGTCCAAGTTATAACGGACACTTCTTCCAGTTATGTTTATGCAGGAAGTCTTCTTATGGCCAAGTACAATTCCTTGTTTTGGTCTCCTTGTGCTTCTTATTGCTTTAATAAAATGTTGGAGGATATTGGTAAACAAGAGTGGGTGTGCACGGTTCTGGAAGAGGCAAGGACCATCACAAACTTCATATGCAGTCATGGATGGACTTTGAATATGATGAGAAAATTTGCTGGTGGAAGGGAGTTGATCAGGCCAAAAATTACTAGATTTGTGACAAATTTCCTCAACTTGAGGTCGATCGTGATTCAGGAGGACAATTTAAAGCACATGTTTTCTCATACAGAATGGTTATCTTCAGCGTCAAGTAGACACCCTGAAGCCCAAGCTGTTAAGTCCTTGTTGTATGTAGAGAGGTTTTGGAAGCATGCACAAGAAGCTGTGACCATTGCGGAACCACTGCTTAAGATCCTTAGAATTGTCGATGGGGACATGCCAGCTATGGGCTACATATACGAAGGAATAGAGAGGGCAAAGATTGCAATAAAGACACATTACAAGGGTATTGAAGAGAAATATATGCCACTTTGGGATATAATTGATCGGAGATGGAGTATGCAGCTACAATCGTCCTTGCATGCAGCGGCAGCGTCTCTTAATCCTTCTCTTTTCTATAATCCAAATTTCAAGATTGATTCAAGGATGAGAAATGGGTTTCAAGAAACTATGTTAAAGATGGCTACCACTCATGAAGATAGAATGGAAATAACTAAAGAGCATCCTGTGTATGTTACTGCACAAGGCGCTCTTGGCACTGATTTCGCAATCATGGGAAGGACATTGAATGCCCCAGGCGACTGGTGGGCAGGATATGGTTACGAAGTCCCGACACTCCAGAGATATGCACTAAGGATATTAAGCCAGCCTTGCAGTTCCCACTGGTGCTGTTGGAACTGGAGCACCTTTGAGAGCATACATGCCAAGAAGCACAGCAGAACAGAGCCGGAAAAATTCAATGACTTGGTTTTTGTTCATTGCAATCTTTGGTTGCAGTCCATTTCTCAAAATAGAGATGGGAAATGTAAACTCATCGTGTTCGATGAAATAGATGTCAGCTCTGAATGGCCTACAGAGTTGGAATCTCCTGCCCCAATTTTGGATGATTCATTATTGGATAGCTTACCCTTGAATGTAGAGGTACTCTCTGAATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

677

Amino Acids

77.3

Weight (kDa)

6.59

Isoelectric Point (pI)

43.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF659	PF04937	182 - 333	6.4e-59	Domain of unknown function (DUF659)
Dimer_Tnp_hAT	PF05699	557 - 620	1.1e-07	hAT family C-terminal dimerisation region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004558)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79740 AT1G79740 AT1G79740 AT1G79740
fragaria_vesca	FvH4_5g00491 FvH4_5g00491 FvH4_5g00491 FvH4_7g30891 FvH4_7g30891
malus_domestica	MD01G1214000.v1.1 MD04G1080400.v1.1
pyrus_communis	pycom01g22470 pycom04g07280
rosa_chinensis	RchiOBHm_Chr1g0379971 RchiOBHm_Chr7g0202011
rosa_laevigata	RLG00000026344
rosa_roxburghii	Rroxscaffold_3G00254950
rosa_rugosa	Rorug01G0415900 Rorug01G0415900 Rorug01G0416000.1 Rorug07G0067300.1
rosa_samantha	Rh1AG440700 Rh1BG396400 Rh1CG409600 Rh1DG427200 Rh7AG194500 Rh7BG196000 Rh7CG205800 Rh7DG201200
rosa_wichuraiana	Rw1G038310 Rw7G017040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	836
AarI	CACCTGC	1 cut(s)	350
Acc36I	ACCTGC	1 cut(s)	350
AccI	GTMKAC	2 cut(s)	105, 1189
AciI	CCGC	2 cut(s)	1271, 1463
AclWI	GGATC	3 cut(s)	426, 558, 1282
AcoI	YGGCCR	1 cut(s)	882
AcsI	RAATTY	4 cut(s)	1046, 1099, 1501, 1829
AcuI	CTGAAG	3 cut(s)	752, 1161, 1218
AfaI	GTAC	4 cut(s)	558, 773, 890, 2019
AfeI	AGCGCT	1 cut(s)	475
AfiI	CCNNNNNNNGG	3 cut(s)	903, 1322, 1975
AflII	CTTAAG	1 cut(s)	1283
AflIII	ACRYGT	1 cut(s)	1149
AjnI	CCWGG	1 cut(s)	1669
Alw21I	GWGCWC	3 cut(s)	33, 974, 1781
Alw26I	GTCTC	2 cut(s)	912, 1476
Alw44I	GTGCAC	1 cut(s)	970
AlwI	GGATC	3 cut(s)	426, 558, 1282
Ama87I	CYCGRG	1 cut(s)	544
Aor51HI	AGCGCT	1 cut(s)	475
AoxI	GGCC	3 cut(s)	882, 1073, 1943
ApaLI	GTGCAC	1 cut(s)	970
ApeKI	GCWGC	5 cut(s)	254, 476, 1438, 1460, 1466
ApoI	RAATTY	4 cut(s)	1046, 1099, 1501, 1829
ArsI	GACNNNNNNTTYG	4 cut(s)	135, 167, 1829, 1861
AspLEI	GCGC	2 cut(s)	476, 1625
AspS9I	GGNCC	3 cut(s)	483, 720, 993
AsuHPI	GGTGA	2 cut(s)	308, 363
AvaI	CYCGRG	1 cut(s)	544
AvaII	GGWCC	3 cut(s)	483, 720, 993
BaeGI	GKGCMC	2 cut(s)	713, 974
BalI	TGGCCA	1 cut(s)	884
BbsI	GAAGAC	1 cut(s)	866
Bbv12I	GWGCWC	3 cut(s)	33, 974, 1781
BbvI	GCAGC	5 cut(s)	266, 463, 1450, 1472, 1478
BcgI	CGANNNNNNTGC	2 cut(s)	1621, 1655
BciT130I	CCWGG	1 cut(s)	1671
BclI	TGATCA	1 cut(s)	1068
BcoDI	GTCTC	2 cut(s)	912, 1476
BfaI	CTAG	4 cut(s)	260, 291, 480, 1086
BfmI	CTRYAG	2 cut(s)	513, 1947
BfoI	RGCGCY	2 cut(s)	477, 1626
BfrI	CTTAAG	1 cut(s)	1283
BfuAI	ACCTGC	1 cut(s)	350
BisI	GCNGC	6 cut(s)	255, 477, 1439, 1461, 1464, 1467
BlsI	GCNGC	6 cut(s)	256, 478, 1440, 1462, 1465, 1468
BmcAI	AGTACT	1 cut(s)	558
Bme1390I	CCNGG	1 cut(s)	1671
Bme18I	GGWCC	3 cut(s)	483, 720, 993
BmeT110I	CYCGRG	1 cut(s)	544
BmgT120I	GGNCC	3 cut(s)	483, 720, 993
BmiI	GGNNCC	3 cut(s)	721, 722, 1275
BmrFI	CCNGG	1 cut(s)	1671
BmsI	GCATC	5 cut(s)	7, 37, 499, 754, 1606
BpiI	GAAGAC	1 cut(s)	866
BplI	GAGNNNNNCTC	3 cut(s)	553, 585, 2006
BpmI	CTGGAG	2 cut(s)	1697, 1795
BpuEI	CTTGAG	1 cut(s)	1132
BsaAI	YACGTR	1 cut(s)	708
BsaI	GGTCTC	1 cut(s)	912
BsaJI	CCNNGG	2 cut(s)	714, 1669
BsaXI	ACNNNNNCTCC	2 cut(s)	1417, 1447
Bsc4I	CCNNNNNNNGG	3 cut(s)	903, 1322, 1975
Bse1I	ACTGG	5 cut(s)	389, 852, 1682, 1763, 1778
Bse3DI	GCAATG	2 cut(s)	1266, 1852
BseBI	CCWGG	1 cut(s)	1671
BseDI	CCNNGG	2 cut(s)	714, 1669
BseGI	GGATG	7 cut(s)	117, 304, 514, 1028, 1527, 1597, 1984
BseLI	CCNNNNNNNGG	3 cut(s)	903, 1322, 1975
BseMI	GCAATG	2 cut(s)	1266, 1852
BseMII	CTCAG	2 cut(s)	551, 714
BseNI	ACTGG	5 cut(s)	389, 852, 1682, 1763, 1778
BseSI	GKGCMC	2 cut(s)	713, 974
BseXI	GCAGC	5 cut(s)	266, 463, 1450, 1472, 1478
BsgI	GTGCAG	2 cut(s)	142, 1599
Bsh1285I	CGRYCG	1 cut(s)	1122
BshFI	GGCC	3 cut(s)	884, 1075, 1945
BsiEI	CGRYCG	1 cut(s)	1122
BsiHKAI	GWGCWC	3 cut(s)	33, 974, 1781
BsiHKCI	CYCGRG	1 cut(s)	544
BsiSI	CCGG	1 cut(s)	1823
BslFI	GGGAC	5 cut(s)	137, 152, 733, 1322, 1688
BslI	CCNNNNNNNGG	3 cut(s)	903, 1322, 1975
BsmAI	GTCTC	2 cut(s)	912, 1476
BsmBI	CGTCTC	1 cut(s)	1476
BsmFI	GGGAC	5 cut(s)	137, 152, 733, 1322, 1688
BsmI	GAATGC	1 cut(s)	1669
BsnI	GGCC	3 cut(s)	884, 1075, 1945
Bso31I	GGTCTC	1 cut(s)	912
BsoBI	CYCGRG	1 cut(s)	544
Bsp1286I	GDGCHC	4 cut(s)	33, 713, 974, 1781
Bsp143I	GATC	7 cut(s)	184, 418, 563, 1068, 1119, 1287, 1420
BspACI	CCGC	2 cut(s)	1271, 1463
BspANI	GGCC	3 cut(s)	884, 1075, 1945
BspCNI	CTCAG	2 cut(s)	552, 713
BspHI	TCATGA	2 cut(s)	754, 1567
BspLI	GGNNCC	3 cut(s)	721, 722, 1275
BspMI	ACCTGC	1 cut(s)	350
BspPI	GGATC	3 cut(s)	426, 558, 1282
BspQI	GCTCTTC	1 cut(s)	289
BspTI	CTTAAG	1 cut(s)	1283
BspTNI	GGTCTC	1 cut(s)	912
BsrDI	GCAATG	2 cut(s)	1266, 1852
BsrI	ACTGG	5 cut(s)	389, 852, 1682, 1763, 1778
BssECI	CCNNGG	2 cut(s)	714, 1669
BssMI	GATC	7 cut(s)	184, 418, 563, 1068, 1119, 1287, 1420
BssNAI	GTATAC	1 cut(s)	106
BssT1I	CCWWGG	1 cut(s)	714
Bst1107I	GTATAC	1 cut(s)	106
Bst2UI	CCWGG	1 cut(s)	1671
Bst4CI	ACNGT	3 cut(s)	35, 524, 976
Bst6I	CTCTTC	4 cut(s)	7, 289, 978, 1383
BstAFI	CTTAAG	1 cut(s)	1283
BstAPI	GCANNNNNTGC	1 cut(s)	1358
BstBAI	YACGTR	1 cut(s)	708
BstC8I	GCNNGC	4 cut(s)	1248, 1317, 1458, 1742
BstDEI	CTNAG	4 cut(s)	560, 700, 1292, 1727
BstF5I	GGATG	7 cut(s)	117, 304, 514, 1028, 1527, 1597, 1984
BstH2I	RGCGCY	2 cut(s)	477, 1626
BstHHI	GCGC	2 cut(s)	476, 1625
BstKTI	GATC	7 cut(s)	187, 421, 566, 1071, 1122, 1290, 1423
BstMAI	GTCTC	2 cut(s)	912, 1476
BstMBI	GATC	7 cut(s)	184, 418, 563, 1068, 1119, 1287, 1420
BstMCI	CGRYCG	1 cut(s)	1122
BstMWI	GCNNNNNNNGC	7 cut(s)	260, 1256, 1358, 1466, 1622, 1629, 1746
BstNI	CCWGG	1 cut(s)	1671
BstNSI	RCATGY	5 cut(s)	1153, 1250, 1315, 1460, 1799
BstSCI	CCNGG	1 cut(s)	1669
BstSFI	CTRYAG	2 cut(s)	513, 1947
BstSLI	GKGCMC	2 cut(s)	713, 974
BstV1I	GCAGC	5 cut(s)	266, 463, 1450, 1472, 1478
BstV2I	GAAGAC	1 cut(s)	866
BstX2I	RGATCY	3 cut(s)	418, 563, 1287
BstXI	CCANNNNNNTGG	2 cut(s)	574, 1677
BstYI	RGATCY	3 cut(s)	418, 563, 1287
BstZ17I	GTATAC	1 cut(s)	106
BsuRI	GGCC	3 cut(s)	884, 1075, 1945
BtsCI	GGATG	7 cut(s)	117, 304, 514, 1028, 1527, 1597, 1984
BtsI	GCAGTG	1 cut(s)	1277
BtsIMutI	CAGTG	5 cut(s)	31, 396, 1277, 1632, 1756
BveI	ACCTGC	1 cut(s)	350
Cac8I	GCNNGC	4 cut(s)	1248, 1317, 1458, 1742
CciI	TCATGA	2 cut(s)	754, 1567
CfoI	GCGC	2 cut(s)	476, 1625
Cfr13I	GGNCC	3 cut(s)	483, 720, 993
CseI	GACGC	2 cut(s)	1170, 1458
Csp6I	GTAC	4 cut(s)	557, 772, 889, 2018
CviQI	GTAC	4 cut(s)	557, 772, 889, 2018
DdeI	CTNAG	4 cut(s)	560, 700, 1292, 1727
DpnI	GATC	7 cut(s)	186, 420, 565, 1070, 1121, 1289, 1422
DpnII	GATC	7 cut(s)	184, 418, 563, 1068, 1119, 1287, 1420
DraI	TTTAAA	1 cut(s)	1143
EaeI	YGGCCR	1 cut(s)	882
Eam1104I	CTCTTC	4 cut(s)	7, 289, 978, 1383
EarI	CTCTTC	4 cut(s)	7, 289, 978, 1383
Eco130I	CCWWGG	1 cut(s)	714
Eco31I	GGTCTC	1 cut(s)	912
Eco47I	GGWCC	3 cut(s)	483, 720, 993
Eco47III	AGCGCT	1 cut(s)	475
Eco57I	CTGAAG	3 cut(s)	752, 1161, 1218
Eco88I	CYCGRG	1 cut(s)	544
EcoO109I	RGGNCCY	1 cut(s)	720
EcoRII	CCWGG	1 cut(s)	1669
EcoT14I	CCWWGG	1 cut(s)	714
ErhI	CCWWGG	1 cut(s)	714
Esp3I	CGTCTC	1 cut(s)	1476
FalI	AAGNNNNNCTT	4 cut(s)	1611, 1643, 1729, 1761
FaqI	GGGAC	5 cut(s)	137, 152, 733, 1322, 1688
FauNDI	CATATG	1 cut(s)	1010
FbaI	TGATCA	1 cut(s)	1068
FblI	GTMKAC	2 cut(s)	105, 1189
Fnu4HI	GCNGC	6 cut(s)	255, 477, 1439, 1461, 1464, 1467
FokI	GGATG	7 cut(s)	124, 291, 521, 1035, 1534, 1584, 1991
Fsp4HI	GCNGC	6 cut(s)	255, 477, 1439, 1461, 1464, 1467
FspBI	CTAG	4 cut(s)	260, 291, 480, 1086
GlaI	GCGC	2 cut(s)	475, 1624
GluI	GCNGC	6 cut(s)	255, 477, 1439, 1461, 1464, 1467
GsuI	CTGGAG	2 cut(s)	1697, 1795
HaeII	RGCGCY	2 cut(s)	477, 1626
HaeIII	GGCC	3 cut(s)	884, 1075, 1945
HapII	CCGG	1 cut(s)	1823
HgaI	GACGC	2 cut(s)	1170, 1458
HhaI	GCGC	2 cut(s)	476, 1625
Hin6I	GCGC	2 cut(s)	474, 1623
HinP1I	GCGC	2 cut(s)	474, 1623
HincII	GTYRAC	2 cut(s)	83, 272
HindII	GTYRAC	2 cut(s)	83, 272
HinfI	GANTC	5 cut(s)	791, 1126, 1514, 1958, 1982
HpaII	CCGG	1 cut(s)	1823
HphI	GGTGA	2 cut(s)	308, 363
Hpy166II	GTNNAC	8 cut(s)	83, 106, 272, 394, 956, 972, 1190, 1904
Hpy188I	TCNGA	5 cut(s)	670, 732, 1425, 1939, 2026
Hpy8I	GTNNAC	8 cut(s)	83, 106, 272, 394, 956, 972, 1190, 1904
HpyAV	CCTTC	5 cut(s)	55, 1053, 1331, 1491, 1647
HpyCH4III	ACNGT	3 cut(s)	35, 524, 976
HpyCH4IV	ACGT	1 cut(s)	707
HpyF10VI	GCNNNNNNNGC	7 cut(s)	260, 1256, 1358, 1466, 1622, 1629, 1746
HpyF3I	CTNAG	4 cut(s)	560, 700, 1292, 1727
HpySE526I	ACGT	1 cut(s)	707
HspAI	GCGC	2 cut(s)	474, 1623
KflI	GGGWCCC	1 cut(s)	720
Ksp22I	TGATCA	1 cut(s)	1068
Kzo9I	GATC	7 cut(s)	184, 418, 563, 1068, 1119, 1287, 1420
LguI	GCTCTTC	1 cut(s)	289
LmnI	GCTCC	3 cut(s)	28, 772, 1776
Lsp1109I	GCAGC	5 cut(s)	266, 463, 1450, 1472, 1478
LweI	GCATC	5 cut(s)	7, 37, 499, 754, 1606
MaeI	CTAG	4 cut(s)	260, 291, 480, 1086
MaeII	ACGT	1 cut(s)	707
MaeIII	GTNAC	7 cut(s)	296, 684, 703, 1093, 1261, 1609, 1694
MalI	GATC	7 cut(s)	186, 420, 565, 1070, 1121, 1289, 1422
MboI	GATC	7 cut(s)	184, 418, 563, 1068, 1119, 1287, 1420
MflI	RGATCY	3 cut(s)	418, 563, 1287
MhlI	GDGCHC	4 cut(s)	33, 713, 974, 1781
MlsI	TGGCCA	1 cut(s)	884
MluNI	TGGCCA	1 cut(s)	884
MlyI	GAGTC	1 cut(s)	800
MmeI	TCCRAC	4 cut(s)	555, 921, 1748, 1935
Mox20I	TGGCCA	1 cut(s)	884
MscI	TGGCCA	1 cut(s)	884
MseI	TTAA	8 cut(s)	194, 930, 1142, 1212, 1284, 1476, 1550, 1736
MslI	CAYNNNNRTG	1 cut(s)	759
Msp20I	TGGCCA	1 cut(s)	884
MspA1I	CMGCKG	1 cut(s)	1463
MspCI	CTTAAG	1 cut(s)	1283
MspI	CCGG	1 cut(s)	1823
MspR9I	CCNGG	1 cut(s)	1671
Mva1269I	GAATGC	1 cut(s)	1669
MvaI	CCWGG	1 cut(s)	1671
MwoI	GCNNNNNNNGC	7 cut(s)	260, 1256, 1358, 1466, 1622, 1629, 1746
NdeI	CATATG	1 cut(s)	1010
NdeII	GATC	7 cut(s)	184, 418, 563, 1068, 1119, 1287, 1420
NlaIV	GGNNCC	3 cut(s)	721, 722, 1275
NmuCI	GTSAC	4 cut(s)	296, 684, 1093, 1261
NspI	RCATGY	5 cut(s)	1153, 1250, 1315, 1460, 1799
PaeI	GCATGC	2 cut(s)	1250, 1460
PagI	TCATGA	2 cut(s)	754, 1567
PaqCI	CACCTGC	1 cut(s)	350
PciI	ACATGT	1 cut(s)	1149
PciSI	GCTCTTC	1 cut(s)	289
PctI	GAATGC	1 cut(s)	1669
PfeI	GAWTC	4 cut(s)	1126, 1514, 1958, 1982
PkrI	GCNGC	6 cut(s)	256, 478, 1440, 1462, 1465, 1468
Ple19I	CGATCG	1 cut(s)	1122
PleI	GAGTC	1 cut(s)	799
PpsI	GAGTC	1 cut(s)	799
Ppu21I	YACGTR	1 cut(s)	708
PpuMI	RGGWCCY	1 cut(s)	720
PscI	ACATGT	1 cut(s)	1149
PsiI	TTATAA	1 cut(s)	836
Psp5II	RGGWCCY	1 cut(s)	720
Psp6I	CCWGG	1 cut(s)	1669
PspGI	CCWGG	1 cut(s)	1669
PspN4I	GGNNCC	3 cut(s)	721, 722, 1275
PspPI	GGNCC	3 cut(s)	483, 720, 993
PspPPI	RGGWCCY	1 cut(s)	720
PsuI	RGATCY	3 cut(s)	418, 563, 1287
PvuI	CGATCG	1 cut(s)	1122
RsaI	GTAC	4 cut(s)	558, 773, 890, 2019
RsaNI	GTAC	4 cut(s)	557, 772, 889, 2018
RseI	CAYNNNNRTG	1 cut(s)	759
SapI	GCTCTTC	1 cut(s)	289
SaqAI	TTAA	8 cut(s)	194, 930, 1142, 1212, 1284, 1476, 1550, 1736
SatI	GCNGC	6 cut(s)	255, 477, 1439, 1461, 1464, 1467
Sau3AI	GATC	7 cut(s)	184, 418, 563, 1068, 1119, 1287, 1420
Sau96I	GGNCC	3 cut(s)	483, 720, 993
ScaI	AGTACT	1 cut(s)	558
SchI	GAGTC	1 cut(s)	800
ScrFI	CCNGG	1 cut(s)	1671
SduI	GDGCHC	4 cut(s)	33, 713, 974, 1781
SfaNI	GCATC	5 cut(s)	7, 37, 499, 754, 1606
SfcI	CTRYAG	2 cut(s)	513, 1947
SinI	GGWCC	3 cut(s)	483, 720, 993
SmiMI	CAYNNNNRTG	1 cut(s)	759
SmlI	CTYRAG	2 cut(s)	1111, 1283
SmoI	CTYRAG	2 cut(s)	1111, 1283
SphI	GCATGC	2 cut(s)	1250, 1460
SsiI	CCGC	2 cut(s)	1271, 1463
SspMI	CTAG	4 cut(s)	260, 291, 480, 1086
StyD4I	CCNGG	1 cut(s)	1669
StyI	CCWWGG	1 cut(s)	714
TaaI	ACNGT	3 cut(s)	35, 524, 976
TaiI	ACGT	1 cut(s)	710
TaqI	TCGA	5 cut(s)	7, 789, 1118, 1302, 1917
TatI	WGTACW	2 cut(s)	556, 888
TauI	GCSGC	1 cut(s)	1466
TfiI	GAWTC	4 cut(s)	1126, 1514, 1958, 1982
Tru1I	TTAA	8 cut(s)	194, 930, 1142, 1212, 1284, 1476, 1550, 1736
Tru9I	TTAA	8 cut(s)	194, 930, 1142, 1212, 1284, 1476, 1550, 1736
TscAI	CASTG	5 cut(s)	38, 396, 1284, 1639, 1763
TseFI	GTSAC	4 cut(s)	296, 684, 1093, 1261
TseI	GCWGC	5 cut(s)	254, 476, 1438, 1460, 1466
Tsp45I	GTSAC	4 cut(s)	296, 684, 1093, 1261
TspGWI	ACGGA	3 cut(s)	475, 759, 854
TspRI	CASTG	5 cut(s)	38, 396, 1284, 1639, 1763
Vha464I	CTTAAG	1 cut(s)	1283
VneI	GTGCAC	1 cut(s)	970
VpaK11BI	GGWCC	3 cut(s)	483, 720, 993
XapI	RAATTY	4 cut(s)	1046, 1099, 1501, 1829
XceI	RCATGY	5 cut(s)	1153, 1250, 1315, 1460, 1799
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1677
XmiI	GTMKAC	2 cut(s)	105, 1189
XspI	CTAG	4 cut(s)	260, 291, 480, 1086
ZrmI	AGTACT	1 cut(s)	558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.