Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004558

Physical Location & Seq

Genomic Coordinates Reverse (-)

63992276 .. 63995631

Gene Structure 3356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG427200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGTTCGAGAGAAAGATATATGTTGGGAATATGCTGAGAAATTAGACGGGAACAAGGTGAAATGCAAGTTCTGCCAGAGAATTCTGAATGGCGGCATTAGTAGATTGAAGCATCATCTATCTCGGCTTCCAAGTAAGGGTGTAAATCCATGTAGCAAAGTAAGAGATGATGTTACTGATAAGGTGAGGACCATCATAGCATCGAAGGAGGAGGTGAAGGAAACTTCTAGTAGTAGTAAGAAGCAAAAGTTTGTTGAAGTTAAATCTCCTCCTATAAGTGTCTCTCCGGTTAAAGCTCTCATGTCTGTGGAGACACCGTCTACAATTCAGAAGGTTTTCCCTACTGTCACTCCAATGGCCCCTTCCTCCTTGAATAACCAGGAGAATGCAGAGAGAAGTATTGCTTTGTTCTTTTTTGAGAACAAGATTGACTTCAGTATAGCCCGTACTTCATCATATCAGCTAATGATCGATGCCATAGCAAAGTGCGGTCCTGGATTTACAGGTCCATCTGCAGAAACTCTGAAGACTACATGGCTGGAAAGGGTCAAGTCTGAAATGAGTCTACAATCTAAAGATATTGAGAAAGAGTGGACTACCACAGGTTGCACTATCATTGCTGATACATGGACTGACAATAAGTCGAGAGCTTTGATCAACTTCTTGGTTTCATCACCCTCGCGGACCTTTTTTCACAAGTCTGTGGATGCATCTGCATATTTCAAGAACACAAAATGCCTTGCTGAGTTATTTGATTCGGTCATACAAGATTTTGGCGCAGAGAATGTTGTGCAGATAATCATGGATAGTAGTTTCAACTATACTGGGGTTGCAAACCATATCCTTCAGAATTATACAACCATTTTTGTGTCTCCTTGTGCCTCTCAGTGTTTAAATCTTATTTTAGAGGAATTCTCCAAGGTAGATTGGGTGAACAGATGCTTCCTACAAGCACAAACCATCTCAAAGTTCATATACAACAATGCCTCAATGCTCGATCTGATGAAAAGGTTCACTGGAGGACAGGACCTCATTAGAACTGGCATCACAAAGTCTGTGTCCAGCTTCCTCTCATTGCAAATCATTTTGAAGCAAAGATCAAGGCTGAAGCACATGTTCAATAGCCCTGAGTTCTGTACCAATTCCTCTTATGCAAATAAAACACACAGCATTTCATGTATCTCCATTATTGAGGACAATGATTTCTGGAGGGCAGCAGAAGAGTGTGTGGCCATCTCCGAGCCATTTCTCAAAGTTTTGAGGGAAGTATCTGGAGGGAAACCTGCTGTGGGTTCTATATATGAGCTAATGACCCGGGCCAAGGAATCAATAAGGACATACTACATTATGGATGAGAACAAGTGCAAGGTATTTTTAGATATAGTTGATCGAAAGTGGCGGGATCAGCTCCATTCTCCTCTACATGCAGCAGCAGCGTTTTTGAACCCCAGCATTCAATACAATCCGGAAATTAAGTTCCTCACATCTATAAAGGAGGACTTCTTTAAGGTTCTAGAGAAGCTATTGCCTTCGCCTGAAATGAGACGCGACATCACTAATCAAATATTTACATTTACAAAGGCAACTGGGATGTTTGGTTGTAGCCTAGCAATGGAAGCAAGAGATGTAGTTTCACCTGGTGAGTCTAGGAATATTCATACAAGAAAATGTTGTCATTGTTGTGCTTATGTGTGTGACCTATTTGTTTCATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

571

Amino Acids

64.56

Weight (kDa)

8.73

Isoelectric Point (pI)

44.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-BED	PF02892	9 - 42	9.1e-07	BED zinc finger
DUF659	PF04937	170 - 321	4.5e-59	Domain of unknown function (DUF659)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004558)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79740 AT1G79740 AT1G79740 AT1G79740
fragaria_vesca	FvH4_5g00491 FvH4_5g00491 FvH4_5g00491 FvH4_7g30891 FvH4_7g30891
malus_domestica	MD01G1214000.v1.1 MD04G1080400.v1.1
pyrus_communis	pycom01g22470 pycom04g07280
rosa_chinensis	RchiOBHm_Chr1g0379971 RchiOBHm_Chr7g0202011
rosa_laevigata	RLG00000026344
rosa_roxburghii	Rroxscaffold_3G00254950
rosa_rugosa	Rorug01G0415900 Rorug01G0415900 Rorug01G0416000.1 Rorug07G0067300.1
rosa_samantha	Rh1AG440700 Rh1BG396400 Rh1CG409600 Rh1DG427200 Rh7AG194500 Rh7BG196000 Rh7CG205800 Rh7DG201200
rosa_wichuraiana	Rw1G038310 Rw7G017040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1291
AccI	GTMKAC	2 cut(s)	320, 565
AccII	CGCG	2 cut(s)	682, 1548
AccIII	TCCGGA	1 cut(s)	1465
AciI	CCGC	4 cut(s)	93, 489, 682, 1399
AclWI	GGATC	1 cut(s)	1410
AcoI	YGGCCR	1 cut(s)	1230
AcsI	RAATTY	2 cut(s)	81, 911
AcuI	CTGAAG	4 cut(s)	418, 545, 830, 1127
AdeI	CACNNNGTG	1 cut(s)	1640
AfaI	GTAC	2 cut(s)	448, 1138
AfiI	CCNNNNNNNGG	4 cut(s)	137, 1289, 1321, 1612
AflIII	ACRYGT	1 cut(s)	1113
AgsI	TTSAA	9 cut(s)	109, 257, 373, 724, 817, 1090, 1120, 1444, 1457
AhdI	GACNNNNNGTC	1 cut(s)	640
AjnI	CCWGG	3 cut(s)	378, 493, 1636
AjuI	GAANNNNNNNTTGG	2 cut(s)	346, 378
AloI	GAACNNNNNNTCC	2 cut(s)	1460, 1492
AluBI	AGCT	7 cut(s)	296, 463, 650, 1065, 1306, 1408, 1522
AluI	AGCT	7 cut(s)	296, 463, 650, 1065, 1306, 1408, 1522
Alw26I	GTCTC	4 cut(s)	286, 305, 876, 1537
AlwI	GGATC	1 cut(s)	1410
Ama87I	CYCGRG	1 cut(s)	1314
Aor13HI	TCCGGA	1 cut(s)	1465
AoxI	GGCC	3 cut(s)	357, 1230, 1317
ApeKI	GCWGC	4 cut(s)	1214, 1427, 1430, 1433
ApoI	RAATTY	2 cut(s)	81, 911
ArsI	GACNNNNNNTTYG	2 cut(s)	1043, 1075
Asp700I	GAANNNNTTC	2 cut(s)	335, 1010
AspLEI	GCGC	1 cut(s)	779
AspS9I	GGNCC	7 cut(s)	189, 358, 491, 506, 684, 1027, 1317
AsuC2I	CCSGG	2 cut(s)	1315, 1316
AsuHPI	GGTGA	7 cut(s)	70, 196, 226, 666, 943, 1626, 1652
AvaI	CYCGRG	1 cut(s)	1314
AvaII	GGWCC	5 cut(s)	189, 491, 506, 684, 1027
BalI	TGGCCA	1 cut(s)	1232
BbsI	GAAGAC	1 cut(s)	533
BbvI	GCAGC	4 cut(s)	1226, 1439, 1442, 1445
BccI	CCATC	4 cut(s)	200, 517, 968, 1241
BciT130I	CCWGG	3 cut(s)	380, 495, 1638
BclI	TGATCA	1 cut(s)	654
BcnI	CCSGG	2 cut(s)	1315, 1316
BcoDI	GTCTC	4 cut(s)	286, 305, 876, 1537
BfaI	CTAG	4 cut(s)	228, 1514, 1607, 1647
BfmI	CTRYAG	1 cut(s)	513
BfuAI	ACCTGC	1 cut(s)	1291
BisI	GCNGC	5 cut(s)	94, 1215, 1428, 1431, 1434
BlsI	GCNGC	5 cut(s)	95, 1216, 1429, 1432, 1435
Bme1390I	CCNGG	5 cut(s)	380, 495, 1315, 1316, 1638
Bme18I	GGWCC	5 cut(s)	189, 491, 506, 684, 1027
BmeRI	GACNNNNNGTC	1 cut(s)	640
BmeT110I	CYCGRG	1 cut(s)	1314
BmgT120I	GGNCC	7 cut(s)	189, 358, 491, 506, 684, 1027, 1317
BmiI	GGNNCC	1 cut(s)	360
BmrFI	CCNGG	5 cut(s)	380, 495, 1315, 1316, 1638
BmrI	ACTGGG	2 cut(s)	834, 1596
BmsI	GCATC	7 cut(s)	121, 209, 463, 697, 719, 929, 1053
BmuI	ACTGGG	2 cut(s)	834, 1596
BpiI	GAAGAC	1 cut(s)	533
BplI	GAGNNNNNCTC	2 cut(s)	899, 931
BpmI	CTGGAG	3 cut(s)	1038, 1228, 1293
BpuMI	CCSGG	2 cut(s)	1315, 1316
Bsa29I	ATCGAT	1 cut(s)	471
BsaJI	CCNNGG	3 cut(s)	918, 1314, 1320
BsaWI	WCCGGW	2 cut(s)	286, 1465
BsaXI	ACNNNNNCTCC	4 cut(s)	302, 332, 334, 364
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 1289, 1321, 1612
Bse1I	ACTGG	4 cut(s)	829, 1021, 1045, 1591
Bse3DI	GCAATG	3 cut(s)	615, 1073, 1617
BseAI	TCCGGA	1 cut(s)	1465
BseBI	CCWGG	3 cut(s)	380, 495, 1638
BseCI	ATCGAT	1 cut(s)	471
BseDI	CCNNGG	3 cut(s)	918, 1314, 1320
BseGI	GGATG	3 cut(s)	712, 1357, 1596
BseLI	CCNNNNNNNGG	4 cut(s)	137, 1289, 1321, 1612
BseMI	GCAATG	3 cut(s)	615, 1073, 1617
BseMII	CTCAG	4 cut(s)	27, 735, 899, 1119
BseNI	ACTGG	4 cut(s)	829, 1021, 1045, 1591
BseRI	GAGGAG	3 cut(s)	224, 258, 1407
BseXI	GCAGC	4 cut(s)	1226, 1439, 1442, 1445
BseYI	CCCAGC	1 cut(s)	1448
BsgI	GTGCAG	1 cut(s)	812
Bsh1236I	CGCG	2 cut(s)	682, 1548
BshFI	GGCC	3 cut(s)	359, 1232, 1319
BshVI	ATCGAT	1 cut(s)	471
BsiHKCI	CYCGRG	1 cut(s)	1314
BsiSI	CCGG	3 cut(s)	287, 1315, 1466
BslI	CCNNNNNNNGG	4 cut(s)	137, 1289, 1321, 1612
BsmAI	GTCTC	4 cut(s)	286, 305, 876, 1537
BsmBI	CGTCTC	1 cut(s)	1537
BsmI	GAATGC	2 cut(s)	391, 1452
BsnI	GGCC	3 cut(s)	359, 1232, 1319
BsoBI	CYCGRG	1 cut(s)	1314
Bsp13I	TCCGGA	1 cut(s)	1465
Bsp143I	GATC	6 cut(s)	468, 654, 997, 1097, 1387, 1402
BspACI	CCGC	4 cut(s)	93, 489, 682, 1399
BspANI	GGCC	3 cut(s)	359, 1232, 1319
BspCNI	CTCAG	4 cut(s)	28, 736, 898, 1120
BspDI	ATCGAT	1 cut(s)	471
BspEI	TCCGGA	1 cut(s)	1465
BspFNI	CGCG	2 cut(s)	682, 1548
BspLI	GGNNCC	1 cut(s)	360
BspMAI	CTGCAG	1 cut(s)	517
BspMI	ACCTGC	1 cut(s)	1291
BspPI	GGATC	1 cut(s)	1410
BsrDI	GCAATG	3 cut(s)	615, 1073, 1617
BsrI	ACTGG	4 cut(s)	829, 1021, 1045, 1591
BssECI	CCNNGG	3 cut(s)	918, 1314, 1320
BssMI	GATC	6 cut(s)	468, 654, 997, 1097, 1387, 1402
BssT1I	CCWWGG	2 cut(s)	918, 1320
Bst2UI	CCWGG	3 cut(s)	380, 495, 1638
Bst4CI	ACNGT	2 cut(s)	318, 346
Bst6I	CTCTTC	1 cut(s)	1215
BstAPI	GCANNNNNTGC	1 cut(s)	72
BstDEI	CTNAG	4 cut(s)	36, 744, 885, 1128
BstF5I	GGATG	3 cut(s)	712, 1357, 1596
BstFNI	CGCG	2 cut(s)	682, 1548
BstHHI	GCGC	1 cut(s)	779
BstKTI	GATC	6 cut(s)	471, 657, 1000, 1100, 1390, 1405
BstMAI	GTCTC	4 cut(s)	286, 305, 876, 1537
BstMBI	GATC	6 cut(s)	468, 654, 997, 1097, 1387, 1402
BstMWI	GCNNNNNNNGC	4 cut(s)	72, 1405, 1433, 1616
BstNI	CCWGG	3 cut(s)	380, 495, 1638
BstNSI	RCATGY	2 cut(s)	1117, 1427
BstSCI	CCNGG	5 cut(s)	378, 493, 1313, 1314, 1636
BstSFI	CTRYAG	1 cut(s)	513
BstUI	CGCG	2 cut(s)	682, 1548
BstV1I	GCAGC	4 cut(s)	1226, 1439, 1442, 1445
BstV2I	GAAGAC	1 cut(s)	533
Bsu15I	ATCGAT	1 cut(s)	471
BsuRI	GGCC	3 cut(s)	359, 1232, 1319
BsuTUI	ATCGAT	1 cut(s)	471
BtsCI	GGATG	3 cut(s)	712, 1357, 1596
BtsIMutI	CAGTG	2 cut(s)	893, 1014
BveI	ACCTGC	1 cut(s)	1291
CfoI	GCGC	1 cut(s)	779
Cfr13I	GGNCC	7 cut(s)	189, 358, 491, 506, 684, 1027, 1317
Cfr9I	CCCGGG	1 cut(s)	1314
ClaI	ATCGAT	1 cut(s)	471
CseI	GACGC	1 cut(s)	1554
CsiI	ACCWGGT	1 cut(s)	1636
Csp6I	GTAC	2 cut(s)	447, 1137
CviAII	CATG	8 cut(s)	150, 301, 534, 627, 802, 1114, 1176, 1424
CviQI	GTAC	2 cut(s)	447, 1137
DdeI	CTNAG	4 cut(s)	36, 744, 885, 1128
DpnI	GATC	6 cut(s)	470, 656, 999, 1099, 1389, 1404
DpnII	GATC	6 cut(s)	468, 654, 997, 1097, 1387, 1402
DraI	TTTAAA	1 cut(s)	894
DraIII	CACNNNGTG	1 cut(s)	1640
DriI	GACNNNNNGTC	1 cut(s)	640
EaeI	YGGCCR	1 cut(s)	1230
Eam1104I	CTCTTC	1 cut(s)	1215
Eam1105I	GACNNNNNGTC	1 cut(s)	640
EarI	CTCTTC	1 cut(s)	1215
Eco130I	CCWWGG	2 cut(s)	918, 1320
Eco47I	GGWCC	5 cut(s)	189, 491, 506, 684, 1027
Eco57I	CTGAAG	4 cut(s)	418, 545, 830, 1127
Eco88I	CYCGRG	1 cut(s)	1314
EcoO109I	RGGNCCY	1 cut(s)	1027
EcoRI	GAATTC	2 cut(s)	81, 911
EcoRII	CCWGG	3 cut(s)	378, 493, 1636
EcoT14I	CCWWGG	2 cut(s)	918, 1320
EcoT22I	ATGCAT	1 cut(s)	712
ErhI	CCWWGG	2 cut(s)	918, 1320
Esp3I	CGTCTC	1 cut(s)	1537
FaeI	CATG	8 cut(s)	153, 304, 537, 630, 805, 1117, 1179, 1427
FalI	AAGNNNNNCTT	6 cut(s)	388, 420, 416, 448, 1484, 1516
FatI	CATG	8 cut(s)	149, 300, 533, 626, 801, 1113, 1175, 1423
FauI	CCCGC	1 cut(s)	1392
FbaI	TGATCA	1 cut(s)	654
FblI	GTMKAC	2 cut(s)	320, 565
Fnu4HI	GCNGC	5 cut(s)	94, 1215, 1428, 1431, 1434
FokI	GGATG	3 cut(s)	719, 1364, 1603
Fsp4HI	GCNGC	5 cut(s)	94, 1215, 1428, 1431, 1434
FspBI	CTAG	4 cut(s)	228, 1514, 1607, 1647
GlaI	GCGC	1 cut(s)	778
GluI	GCNGC	5 cut(s)	94, 1215, 1428, 1431, 1434
GsaI	CCCAGC	1 cut(s)	1452
GsuI	CTGGAG	3 cut(s)	1038, 1228, 1293
HaeIII	GGCC	3 cut(s)	359, 1232, 1319
HapII	CCGG	3 cut(s)	287, 1315, 1466
HgaI	GACGC	1 cut(s)	1554
HhaI	GCGC	1 cut(s)	779
Hin1II	CATG	8 cut(s)	153, 304, 537, 630, 805, 1117, 1179, 1427
Hin6I	GCGC	1 cut(s)	777
HinP1I	GCGC	1 cut(s)	777
HinfI	GANTC	4 cut(s)	562, 755, 1325, 1643
HpaII	CCGG	3 cut(s)	287, 1315, 1466
HphI	GGTGA	7 cut(s)	70, 196, 226, 666, 943, 1626, 1652
Hpy166II	GTNNAC	5 cut(s)	321, 566, 594, 934, 1014
Hpy188I	TCNGA	7 cut(s)	87, 330, 525, 556, 849, 1002, 1240
Hpy188III	TCNNGA	7 cut(s)	8, 645, 724, 1207, 1272, 1466, 1514
Hpy8I	GTNNAC	5 cut(s)	321, 566, 594, 934, 1014
HpyAV	CCTTC	6 cut(s)	199, 211, 325, 372, 854, 1539
HpyCH4III	ACNGT	2 cut(s)	318, 346
HpyF10VI	GCNNNNNNNGC	4 cut(s)	72, 1405, 1433, 1616
HpyF3I	CTNAG	4 cut(s)	36, 744, 885, 1128
Hsp92II	CATG	8 cut(s)	153, 304, 537, 630, 805, 1117, 1179, 1427
HspAI	GCGC	1 cut(s)	777
Kpn2I	TCCGGA	1 cut(s)	1465
Ksp22I	TGATCA	1 cut(s)	654
Kzo9I	GATC	6 cut(s)	468, 654, 997, 1097, 1387, 1402
LmnI	GCTCC	1 cut(s)	1413
Lsp1109I	GCAGC	4 cut(s)	1226, 1439, 1442, 1445
LweI	GCATC	7 cut(s)	121, 209, 463, 697, 719, 929, 1053
MabI	ACCWGGT	1 cut(s)	1636
MaeI	CTAG	4 cut(s)	228, 1514, 1607, 1647
MaeIII	GTNAC	3 cut(s)	172, 346, 1694
MalI	GATC	6 cut(s)	470, 656, 999, 1099, 1389, 1404
MboI	GATC	6 cut(s)	468, 654, 997, 1097, 1387, 1402
MboII	GAAGA	2 cut(s)	538, 1232
MlsI	TGGCCA	1 cut(s)	1232
MluCI	AATT	7 cut(s)	41, 81, 324, 850, 911, 1141, 1470
MluNI	TGGCCA	1 cut(s)	1232
MlyI	GAGTC	2 cut(s)	571, 1652
Mox20I	TGGCCA	1 cut(s)	1232
Mph1103I	ATGCAT	1 cut(s)	712
MroI	TCCGGA	1 cut(s)	1465
MroXI	GAANNNNTTC	2 cut(s)	335, 1010
MscI	TGGCCA	1 cut(s)	1232
MseI	TTAA	5 cut(s)	261, 291, 893, 1473, 1506
MslI	CAYNNNNRTG	4 cut(s)	305, 353, 866, 1680
Msp20I	TGGCCA	1 cut(s)	1232
MspI	CCGG	3 cut(s)	287, 1315, 1466
MspR9I	CCNGG	5 cut(s)	380, 495, 1315, 1316, 1638
Mva1269I	GAATGC	2 cut(s)	391, 1452
MvaI	CCWGG	3 cut(s)	380, 495, 1638
MvnI	CGCG	2 cut(s)	682, 1548
MwoI	GCNNNNNNNGC	4 cut(s)	72, 1405, 1433, 1616
NciI	CCSGG	2 cut(s)	1315, 1316
NdeII	GATC	6 cut(s)	468, 654, 997, 1097, 1387, 1402
NlaIII	CATG	8 cut(s)	153, 304, 537, 630, 805, 1117, 1179, 1427
NlaIV	GGNNCC	1 cut(s)	360
NmeAIII	GCCGAG	1 cut(s)	103
NmuCI	GTSAC	2 cut(s)	346, 1694
NsiI	ATGCAT	1 cut(s)	712
NspI	RCATGY	2 cut(s)	1117, 1427
PciI	ACATGT	1 cut(s)	1113
PctI	GAATGC	2 cut(s)	391, 1452
PdmI	GAANNNNTTC	2 cut(s)	335, 1010
PfeI	GAWTC	2 cut(s)	755, 1325
PflFI	GACNNNGTC	1 cut(s)	316
PfoI	TCCNGGA	1 cut(s)	493
PkrI	GCNGC	5 cut(s)	95, 1216, 1429, 1432, 1435
PleI	GAGTC	2 cut(s)	570, 1651
PpsI	GAGTC	2 cut(s)	570, 1651
PpuMI	RGGWCCY	1 cut(s)	1027
PscI	ACATGT	1 cut(s)	1113
Psp5II	RGGWCCY	1 cut(s)	1027
Psp6I	CCWGG	3 cut(s)	378, 493, 1636
PspFI	CCCAGC	1 cut(s)	1448
PspGI	CCWGG	3 cut(s)	378, 493, 1636
PspN4I	GGNNCC	1 cut(s)	360
PspPI	GGNCC	7 cut(s)	189, 358, 491, 506, 684, 1027, 1317
PspPPI	RGGWCCY	1 cut(s)	1027
PstI	CTGCAG	1 cut(s)	517
PsyI	GACNNNGTC	1 cut(s)	316
RsaI	GTAC	2 cut(s)	448, 1138
RsaNI	GTAC	2 cut(s)	447, 1137
RseI	CAYNNNNRTG	4 cut(s)	305, 353, 866, 1680
SaqAI	TTAA	5 cut(s)	261, 291, 893, 1473, 1506
SatI	GCNGC	5 cut(s)	94, 1215, 1428, 1431, 1434
Sau3AI	GATC	6 cut(s)	468, 654, 997, 1097, 1387, 1402
Sau96I	GGNCC	7 cut(s)	189, 358, 491, 506, 684, 1027, 1317
SchI	GAGTC	2 cut(s)	571, 1652
ScrFI	CCNGG	5 cut(s)	380, 495, 1315, 1316, 1638
SexAI	ACCWGGT	1 cut(s)	1636
SfaNI	GCATC	7 cut(s)	121, 209, 463, 697, 719, 929, 1053
SfcI	CTRYAG	1 cut(s)	513
SinI	GGWCC	5 cut(s)	189, 491, 506, 684, 1027
SmaI	CCCGGG	1 cut(s)	1316
SmiMI	CAYNNNNRTG	4 cut(s)	305, 353, 866, 1680
Sse9I	AATT	7 cut(s)	41, 81, 324, 850, 911, 1141, 1470
SsiI	CCGC	4 cut(s)	93, 489, 682, 1399
SspI	AATATT	2 cut(s)	1566, 1654
SspMI	CTAG	4 cut(s)	228, 1514, 1607, 1647
StyD4I	CCNGG	5 cut(s)	378, 493, 1313, 1314, 1636
StyI	CCWWGG	2 cut(s)	918, 1320
TaaI	ACNGT	2 cut(s)	318, 346
TaqI	TCGA	6 cut(s)	7, 203, 471, 644, 996, 1390
TaqII	GACCGA	1 cut(s)	748
TasI	AATT	7 cut(s)	41, 81, 324, 850, 911, 1141, 1470
TauI	GCSGC	1 cut(s)	96
TfiI	GAWTC	2 cut(s)	755, 1325
Tru1I	TTAA	5 cut(s)	261, 291, 893, 1473, 1506
Tru9I	TTAA	5 cut(s)	261, 291, 893, 1473, 1506
TscAI	CASTG	2 cut(s)	893, 1021
TseFI	GTSAC	2 cut(s)	346, 1694
TseI	GCWGC	4 cut(s)	1214, 1427, 1430, 1433
Tsp45I	GTSAC	2 cut(s)	346, 1694
TspDTI	ATGAA	7 cut(s)	441, 660, 961, 1019, 1164, 1646, 1698
TspMI	CCCGGG	1 cut(s)	1314
TspRI	CASTG	2 cut(s)	893, 1021
Tth111I	GACNNNGTC	1 cut(s)	316
VpaK11BI	GGWCC	5 cut(s)	189, 491, 506, 684, 1027
XapI	RAATTY	2 cut(s)	81, 911
XbaI	TCTAGA	1 cut(s)	1513
XceI	RCATGY	2 cut(s)	1117, 1427
XmaI	CCCGGG	1 cut(s)	1314
XmiI	GTMKAC	2 cut(s)	320, 565
XmnI	GAANNNNTTC	2 cut(s)	335, 1010
XspI	CTAG	4 cut(s)	228, 1514, 1607, 1647
Zsp2I	ATGCAT	1 cut(s)	712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.