pycom04g09530

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
12191271 .. 12193087
1817 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g09530.3

Sequence Viewer

Length: 1467 bp
ATGCAAATGATGTCCGGTGATGGGTTTTCGATTAATATGTCATCCGCCATTGACGGGTTTGCTCAAGATCATCAACTAAATGATAACCCTAGCGGCGGCCTAAAACCCAATCCTCCTAACACCGTCGCCAAAAAGAAGAGAAATCTCCCGGGAACACCAGATCCAGATGCTGAGGTTATTGCCCTATCTCCGACAACATTAATGGCAACAAACCGGTTCGTCTGCGAAATATGCAACAAGGGTTTCCAGAGAGACCAGAATTTGCAGCTTCACCGAAGGGGTCACAACCTTCCCTGGAAGCTCAAGCAGCGACTGAACAAGGAGGTGAAGAAGAAGGTTTATATTTGCCCCGAGAAGACCTGCGTCCACCATGACCCGTCGAGAGCTCTTGGAGACCTCACCGGAATAAAGAAGCATTTCAGCAGAAAACATGGAGAGAAAAAGTGGAAGTGTGAGAAGTGTTCTAAGAAATATGCTGTCCAATCGGATTGGAAAGCTCACTCCAAGACCTGTGGGACTAGAGAGTATAAGTGTGACTGTGGAACCCTCTTTTCCAGGAAAGATAGCTTCATCACGCACAGAGCATTTTGTGATGCCCTAACTGAAGAGAGTGCTAGGCTCACTACTTCATCAGTTATTGGAGTTCATTCAAATCTCAACTTTGGAAATGATGCAATGTTAAACAATCCAATGATGAACAATAGTCAAGCAGTAGTTCAAGATGTGTCTCAAATTTCCATGCAGTATGGGCAAGGTTTGATGAGGCAAGATTTCAATGGCTTAGATCAGCTTCATCAACATGAGAAGCCAAGATTGTCACTATGGTTGAATCAGCAGGCAACCAGTAATTCTAATCAGGTTAATCTGATGGATGATATGCAAGCAAATCCTAATCATCCGCTTTATGTAACATCATCAAGCTCTAATGCTTTTCCGGAAATGGTGCAAATGCCATCGTCTTCCAACAATGTCAATCTTTTTGGCTCATCTAATTCCATGACAACTTTTAGAGCATCAACAAGTGGTGCAAATCTCTCTTTGTCACCAGGTCAAGAAAGCGGGACTAGTAAGCTCATTGGGAAAAATAGTAATTTGGTGGGCAGCGGCACGTCCAAGCCACCGGCTGCCCCAATGTCAGCCACAGCACTTTTACAAAAAGCAGCTCAATTGGGTTCGACTAGAAGCAGCAACAACCAAGGCAGCAGCTTGGGTGTAAATGTAATGTCCTCATCATCTTCTTCCAACACTTTGAGGGGCTTCTCGAATTTGAACCAAAATCGATCGAACGAGCTTCATCAAGTTGTTCAAAATGCACACCAATCAGATGGTGGTAGTGCAAATTTGAGTTCATTAACAAGTTCATCATCAAATACTAGTGCTACTACACTTGAGCAGCTGATGAATACTATTCAACGGGGTCCGAGCAATATCGGAAGTATTGATCGATCATCAAAACAGTCTAACTAG

Protein Analysis

489

Amino Acids

53.1

Weight (kDa)

9.43

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 368
AccIII TCCGGA 1 cut(s) 934
AciI CCGC 6 cut(s) 45, 93, 96, 899, 1059, 1104
AclWI GGATC 1 cut(s) 155
AcsI RAATTY 4 cut(s) 259, 732, 1264, 1339
AcuI CTGAAG 1 cut(s) 624
AfiI CCNNNNNNNGG 3 cut(s) 21, 54, 95
AgeI ACCGGT 1 cut(s) 213
AgsI TTSAA 7 cut(s) 651, 719, 775, 829, 1270, 1307, 1412
AhlI ACTAGT 2 cut(s) 1064, 1373
AjiI CACGTC 1 cut(s) 1110
AjnI CCWGG 3 cut(s) 293, 554, 1045
AloI GAACNNNNNNTCC 2 cut(s) 145, 177
Alw21I GWGCWC 1 cut(s) 388
Alw26I GTCTC 3 cut(s) 246, 387, 732
AlwI GGATC 1 cut(s) 155
AlwNI CAGNNNCTG 2 cut(s) 170, 313
Ama87I CYCGRG 2 cut(s) 148, 350
Aor13HI TCCGGA 1 cut(s) 934
AoxI GGCC 1 cut(s) 97
ApeKI GCWGC 9 cut(s) 265, 307, 1101, 1124, 1160, 1185, 1200, 1203, 1393
ApoI RAATTY 4 cut(s) 259, 732, 1264, 1339
AseI ATTAAT 2 cut(s) 33, 200
AsiGI ACCGGT 1 cut(s) 213
Asp700I GAANNNNTTC 1 cut(s) 416
AspS9I GGNCC 1 cut(s) 1418
AsuC2I CCSGG 2 cut(s) 149, 150
AsuHPI GGTGA 5 cut(s) 29, 263, 337, 391, 1035
AvaI CYCGRG 2 cut(s) 148, 350
AvaII GGWCC 1 cut(s) 1418
BanII GRGCYC 1 cut(s) 388
BbsI GAAGAC 2 cut(s) 362, 951
Bbv12I GWGCWC 1 cut(s) 388
BbvCI CCTCAGC 1 cut(s) 171
BbvI GCAGC 9 cut(s) 277, 319, 1111, 1113, 1172, 1197, 1212, 1215, 1405
BccI CCATC 4 cut(s) 14, 862, 961, 1319
BciT130I CCWGG 3 cut(s) 295, 556, 1047
BcnI CCSGG 2 cut(s) 149, 150
BcoDI GTCTC 3 cut(s) 246, 387, 732
BcuI ACTAGT 2 cut(s) 1064, 1373
BfaI CTAG 7 cut(s) 90, 519, 615, 1065, 1179, 1374, 1465
BfuAI ACCTGC 1 cut(s) 368
Bme1390I CCNGG 5 cut(s) 149, 150, 295, 556, 1047
Bme18I GGWCC 1 cut(s) 1418
BmeT110I CYCGRG 2 cut(s) 148, 350
BmgBI CACGTC 1 cut(s) 1110
BmgT120I GGNCC 1 cut(s) 1418
BmiI GGNNCC 2 cut(s) 544, 1419
BmrFI CCNGG 5 cut(s) 149, 150, 295, 556, 1047
BmsI GCATC 4 cut(s) 157, 583, 661, 1022
BoxI GACNNNNGTC 1 cut(s) 362
BpiI GAAGAC 2 cut(s) 362, 951
Bpu10I CCTNAGC 1 cut(s) 171
BpuEI CTTGAG 3 cut(s) 48, 287, 1409
BpuMI CCSGG 2 cut(s) 149, 150
Bsa29I ATCGAT 2 cut(s) 1279, 1444
BsaI GGTCTC 2 cut(s) 246, 387
BsaJI CCNNGG 3 cut(s) 148, 293, 1195
BsaWI WCCGGW 4 cut(s) 14, 213, 401, 934
Bsc4I CCNNNNNNNGG 3 cut(s) 21, 54, 95
Bse118I RCCGGY 2 cut(s) 213, 1120
Bse1I ACTGG 1 cut(s) 843
Bse3DI GCAATG 1 cut(s) 681
BseAI TCCGGA 1 cut(s) 934
BseBI CCWGG 3 cut(s) 295, 556, 1047
BseCI ATCGAT 2 cut(s) 1279, 1444
BseDI CCNNGG 3 cut(s) 148, 293, 1195
BseGI GGATG 3 cut(s) 41, 877, 895
BseLI CCNNNNNNNGG 3 cut(s) 21, 54, 95
BseMI GCAATG 1 cut(s) 681
BseMII CTCAG 1 cut(s) 162
BseNI ACTGG 1 cut(s) 843
BseXI GCAGC 9 cut(s) 277, 319, 1111, 1113, 1172, 1197, 1212, 1215, 1405
Bsh1285I CGRYCG 1 cut(s) 1283
BshFI GGCC 1 cut(s) 99
BshTI ACCGGT 1 cut(s) 213
BshVI ATCGAT 2 cut(s) 1279, 1444
BsiEI CGRYCG 1 cut(s) 1283
BsiHKAI GWGCWC 1 cut(s) 388
BsiHKCI CYCGRG 2 cut(s) 148, 350
BsiSI CCGG 6 cut(s) 15, 149, 214, 402, 935, 1121
BslFI GGGAC 2 cut(s) 529, 1075
BslI CCNNNNNNNGG 3 cut(s) 21, 54, 95
BsmAI GTCTC 3 cut(s) 246, 387, 732
BsmFI GGGAC 2 cut(s) 529, 1075
BsnI GGCC 1 cut(s) 99
Bso31I GGTCTC 2 cut(s) 246, 387
BsoBI CYCGRG 2 cut(s) 148, 350
Bsp1286I GDGCHC 1 cut(s) 388
Bsp13I TCCGGA 1 cut(s) 934
Bsp143I GATC 6 cut(s) 67, 160, 784, 1280, 1441, 1445
BspACI CCGC 6 cut(s) 45, 93, 96, 899, 1059, 1104
BspANI GGCC 1 cut(s) 99
BspCNI CTCAG 1 cut(s) 163
BspDI ATCGAT 2 cut(s) 1279, 1444
BspEI TCCGGA 1 cut(s) 934
BspLI GGNNCC 2 cut(s) 544, 1419
BspMI ACCTGC 1 cut(s) 368
BspPI GGATC 1 cut(s) 155
BspTNI GGTCTC 2 cut(s) 246, 387
BsrDI GCAATG 1 cut(s) 681
BsrFI RCCGGY 2 cut(s) 213, 1120
BsrI ACTGG 1 cut(s) 843
BssAI RCCGGY 2 cut(s) 213, 1120
BssECI CCNNGG 3 cut(s) 148, 293, 1195
BssMI GATC 6 cut(s) 67, 160, 784, 1280, 1441, 1445
BssT1I CCWWGG 1 cut(s) 1195
Bst2UI CCWGG 3 cut(s) 295, 556, 1047
Bst4CI ACNGT 3 cut(s) 124, 539, 1458
Bst6I CTCTTC 2 cut(s) 131, 600
BstC8I GCNNGC 2 cut(s) 837, 882
BstDEI CTNAG 3 cut(s) 171, 465, 781
BstF5I GGATG 3 cut(s) 41, 877, 895
BstKTI GATC 6 cut(s) 70, 163, 787, 1283, 1444, 1448
BstMAI GTCTC 3 cut(s) 246, 387, 732
BstMBI GATC 6 cut(s) 67, 160, 784, 1280, 1441, 1445
BstMCI CGRYCG 1 cut(s) 1283
BstMWI GCNNNNNNNGC 3 cut(s) 231, 307, 748
BstNI CCWGG 3 cut(s) 295, 556, 1047
BstPAI GACNNNNGTC 1 cut(s) 362
BstSCI CCNGG 5 cut(s) 147, 148, 293, 554, 1045
BstV1I GCAGC 9 cut(s) 277, 319, 1111, 1113, 1172, 1197, 1212, 1215, 1405
BstV2I GAAGAC 2 cut(s) 362, 951
BstX2I RGATCY 1 cut(s) 160
BstXI CCANNNNNNTGG 1 cut(s) 1325
BstYI RGATCY 1 cut(s) 160
Bsu15I ATCGAT 2 cut(s) 1279, 1444
BsuRI GGCC 1 cut(s) 99
BsuTUI ATCGAT 2 cut(s) 1279, 1444
BtrI CACGTC 1 cut(s) 1110
BtsCI GGATG 3 cut(s) 41, 877, 895
BveI ACCTGC 1 cut(s) 368
Cac8I GCNNGC 2 cut(s) 837, 882
CaiI CAGNNNCTG 2 cut(s) 170, 313
Cfr10I RCCGGY 2 cut(s) 213, 1120
Cfr13I GGNCC 1 cut(s) 1418
Cfr9I CCCGGG 1 cut(s) 148
ClaI ATCGAT 2 cut(s) 1279, 1444
CseI GACGC 1 cut(s) 352
CsiI ACCWGGT 1 cut(s) 1045
CspAI ACCGGT 1 cut(s) 213
CspCI CAANNNNNGTGG 2 cut(s) 493, 528
CviAII CATG 5 cut(s) 371, 431, 739, 800, 997
DdeI CTNAG 3 cut(s) 171, 465, 781
DpnI GATC 6 cut(s) 69, 162, 786, 1282, 1443, 1447
DpnII GATC 6 cut(s) 67, 160, 784, 1280, 1441, 1445
Eam1104I CTCTTC 2 cut(s) 131, 600
EarI CTCTTC 2 cut(s) 131, 600
EciI GGCGGA 1 cut(s) 34
Ecl136II GAGCTC 1 cut(s) 386
Eco130I CCWWGG 1 cut(s) 1195
Eco24I GRGCYC 1 cut(s) 388
Eco31I GGTCTC 2 cut(s) 246, 387
Eco47I GGWCC 1 cut(s) 1418
Eco53kI GAGCTC 1 cut(s) 386
Eco57I CTGAAG 1 cut(s) 624
Eco88I CYCGRG 2 cut(s) 148, 350
EcoICRI GAGCTC 1 cut(s) 386
EcoRII CCWGG 3 cut(s) 293, 554, 1045
EcoT14I CCWWGG 1 cut(s) 1195
EcoT38I GRGCYC 1 cut(s) 388
ErhI CCWWGG 1 cut(s) 1195
FaeI CATG 5 cut(s) 374, 434, 742, 803, 1000
FaqI GGGAC 2 cut(s) 529, 1075
FatI CATG 5 cut(s) 370, 430, 738, 799, 996
FauI CCCGC 1 cut(s) 1052
FokI GGATG 3 cut(s) 28, 882, 884
FriOI GRGCYC 1 cut(s) 388
FspBI CTAG 7 cut(s) 90, 519, 615, 1065, 1179, 1374, 1465
HaeIII GGCC 1 cut(s) 99
HapII CCGG 6 cut(s) 15, 149, 214, 402, 935, 1121
HgaI GACGC 1 cut(s) 352
Hin1II CATG 5 cut(s) 374, 434, 742, 803, 1000
HinfI GANTC 1 cut(s) 829
HpaII CCGG 6 cut(s) 15, 149, 214, 402, 935, 1121
HphI GGTGA 5 cut(s) 29, 263, 337, 391, 1035
Hpy166II GTNNAC 1 cut(s) 367
Hpy188I TCNGA 6 cut(s) 192, 487, 867, 1324, 1422, 1433
Hpy188III TCNNGA 8 cut(s) 65, 164, 247, 381, 719, 935, 1052, 1261
Hpy8I GTNNAC 1 cut(s) 367
Hpy99I CGWCG 2 cut(s) 128, 382
HpyAV CCTTC 3 cut(s) 270, 299, 328
HpyCH4III ACNGT 3 cut(s) 124, 539, 1458
HpyCH4IV ACGT 1 cut(s) 1109
HpyF10VI GCNNNNNNNGC 3 cut(s) 231, 307, 748
HpyF3I CTNAG 3 cut(s) 171, 465, 781
HpySE526I ACGT 1 cut(s) 1109
Hsp92II CATG 5 cut(s) 374, 434, 742, 803, 1000
Kpn2I TCCGGA 1 cut(s) 934
Kzo9I GATC 6 cut(s) 67, 160, 784, 1280, 1441, 1445
Lsp1109I GCAGC 9 cut(s) 277, 319, 1111, 1113, 1172, 1197, 1212, 1215, 1405
LweI GCATC 4 cut(s) 157, 583, 661, 1022
MabI ACCWGGT 1 cut(s) 1045
MaeI CTAG 7 cut(s) 90, 519, 615, 1065, 1179, 1374, 1465
MaeII ACGT 1 cut(s) 1109
MaeIII GTNAC 5 cut(s) 281, 533, 816, 907, 1041
MalI GATC 6 cut(s) 69, 162, 786, 1282, 1443, 1447
MboI GATC 6 cut(s) 67, 160, 784, 1280, 1441, 1445
MboII GAAGA 8 cut(s) 148, 340, 343, 367, 617, 951, 1227, 1230
MfeI CAATTG 1 cut(s) 1166
MflI RGATCY 1 cut(s) 160
MhlI GDGCHC 1 cut(s) 388
MluCI AATT 8 cut(s) 259, 732, 847, 991, 1090, 1166, 1264, 1339
MmeI TCCRAC 3 cut(s) 215, 987, 1266
MnlI CCTC 8 cut(s) 123, 166, 316, 407, 557, 756, 1237, 1245
MroI TCCGGA 1 cut(s) 934
MroXI GAANNNNTTC 1 cut(s) 416
MseI TTAA 5 cut(s) 33, 200, 680, 861, 1352
MslI CAYNNNNRTG 1 cut(s) 798
MspA1I CMGCKG 2 cut(s) 1104, 1396
MspI CCGG 6 cut(s) 15, 149, 214, 402, 935, 1121
MspR9I CCNGG 5 cut(s) 149, 150, 295, 556, 1047
MunI CAATTG 1 cut(s) 1166
MvaI CCWGG 3 cut(s) 295, 556, 1047
MwoI GCNNNNNNNGC 3 cut(s) 231, 307, 748
NciI CCSGG 2 cut(s) 149, 150
NdeII GATC 6 cut(s) 67, 160, 784, 1280, 1441, 1445
NlaIII CATG 5 cut(s) 374, 434, 742, 803, 1000
NlaIV GGNNCC 2 cut(s) 544, 1419
NmuCI GTSAC 4 cut(s) 281, 533, 816, 1041
PdmI GAANNNNTTC 1 cut(s) 416
PfeI GAWTC 1 cut(s) 829
PfoI TCCNGGA 1 cut(s) 554
PinAI ACCGGT 1 cut(s) 213
Ple19I CGATCG 1 cut(s) 1283
PshAI GACNNNNGTC 1 cut(s) 362
PshBI ATTAAT 2 cut(s) 33, 200
Psp124BI GAGCTC 1 cut(s) 388
Psp6I CCWGG 3 cut(s) 293, 554, 1045
PspGI CCWGG 3 cut(s) 293, 554, 1045
PspN4I GGNNCC 2 cut(s) 544, 1419
PspPI GGNCC 1 cut(s) 1418
PstNI CAGNNNCTG 2 cut(s) 170, 313
PsuI RGATCY 1 cut(s) 160
PvuI CGATCG 1 cut(s) 1283
PvuII CAGCTG 1 cut(s) 1396
RseI CAYNNNNRTG 1 cut(s) 798
SacI GAGCTC 1 cut(s) 388
SaqAI TTAA 5 cut(s) 33, 200, 680, 861, 1352
Sau3AI GATC 6 cut(s) 67, 160, 784, 1280, 1441, 1445
Sau96I GGNCC 1 cut(s) 1418
ScrFI CCNGG 5 cut(s) 149, 150, 295, 556, 1047
SduI GDGCHC 1 cut(s) 388
SexAI ACCWGGT 1 cut(s) 1045
SfaNI GCATC 4 cut(s) 157, 583, 661, 1022
SinI GGWCC 1 cut(s) 1418
SmaI CCCGGG 1 cut(s) 150
SmiMI CAYNNNNRTG 1 cut(s) 798
SmlI CTYRAG 3 cut(s) 63, 302, 1388
SmoI CTYRAG 3 cut(s) 63, 302, 1388
SpeI ACTAGT 2 cut(s) 1064, 1373
Sse9I AATT 8 cut(s) 259, 732, 847, 991, 1090, 1166, 1264, 1339
SsiI CCGC 6 cut(s) 45, 93, 96, 899, 1059, 1104
SspMI CTAG 7 cut(s) 90, 519, 615, 1065, 1179, 1374, 1465
SstI GAGCTC 1 cut(s) 388
StyD4I CCNGG 5 cut(s) 147, 148, 293, 554, 1045
StyI CCWWGG 1 cut(s) 1195
TaaI ACNGT 3 cut(s) 124, 539, 1458
TaiI ACGT 1 cut(s) 1112
TaqI TCGA 7 cut(s) 29, 380, 1175, 1262, 1279, 1283, 1444
TasI AATT 8 cut(s) 259, 732, 847, 991, 1090, 1166, 1264, 1339
TauI GCSGC 3 cut(s) 96, 99, 1107
TfiI GAWTC 1 cut(s) 829
Tru1I TTAA 5 cut(s) 33, 200, 680, 861, 1352
Tru9I TTAA 5 cut(s) 33, 200, 680, 861, 1352
TseFI GTSAC 4 cut(s) 281, 533, 816, 1041
TseI GCWGC 9 cut(s) 265, 307, 1101, 1124, 1160, 1185, 1200, 1203, 1393
Tsp45I GTSAC 4 cut(s) 281, 533, 816, 1041
TspDTI ATGAA 9 cut(s) 559, 618, 635, 710, 782, 1283, 1338, 1350, 1415
TspMI CCCGGG 1 cut(s) 148
VpaK11BI GGWCC 1 cut(s) 1418
VspI ATTAAT 2 cut(s) 33, 200
XapI RAATTY 4 cut(s) 259, 732, 1264, 1339
XcmI CCANNNNNNNNNTGG 1 cut(s) 1325
XmaI CCCGGG 1 cut(s) 148
XmnI GAANNNNTTC 1 cut(s) 416
XspI CTAG 7 cut(s) 90, 519, 615, 1065, 1179, 1374, 1465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.