pycom04g10890
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
13667972 .. 13669447
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g10890.5

Sequence Viewer

Length: 678 bp
ATGGATGAAACTCTAAGCACACTGGATTATGCCTATCGTGCCAAGAACATTAAAAACAAACCCGAGGCAAACCAGAAAATGTCAAAACCTGTGCTGCTCAAGGAATTGTATTCAGAGATTGAGAGAATGAAAGAAGATATTCGAGCGGCACGGGAAAAGAATGGTGTTTATATTCCGCATGAAAGATTTGTCCATGATGAAGCTGAAAAAAAGGCTAGGATTGAGAGAATAGAGCAATTGGAGAATGACCTCAACCTCACAGAAAAGCAAGCGGAAACTTTTCGTGATCTCTATATCGGCGAACAAGAACAGAAGCTGGATTTACAAAGTGAGCTCAAGGACTGCAAGATAAATCTGGATAACTGTAACAAGGCTCTGCTTGAACTTCAAGAGGATTACCAAACAGCCACCTCAACCTTGAAAGAGAAGGAGCACATCATCTCCAAAATGCTAGTCTCAGAAAATCTCTTAATTGGACGGGCAAAGGAGTTGCGCAGTGATTTGAAGAATGCATCAGAGGAAATGAATTCCCTCTATGAAAAATTAGATCAGAAAGACAAGATGGAAGAAGAAAATCAGAGCTTGGTTTTGACATTTGGTTCTCAACTTGATCGGAGCTTGAAAGACCTACATAATCGATCATCCTGGGGTCTGTTTCTCAACAGCAGTATCAACTAA

Protein Analysis

226

Amino Acids

26.34

Weight (kDa)

5.2

Isoelectric Point (pI)

56.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 494
AccBSI CCGCTC 1 cut(s) 146
AciI CCGC 3 cut(s) 146, 176, 272
AcsI RAATTY 1 cut(s) 526
AgsI TTSAA 5 cut(s) 383, 389, 421, 505, 622
AjnI CCWGG 1 cut(s) 644
AluBI AGCT 5 cut(s) 203, 316, 334, 582, 618
AluI AGCT 5 cut(s) 203, 316, 334, 582, 618
Alw21I GWGCWC 2 cut(s) 336, 435
Alw26I GTCTC 1 cut(s) 460
AlwNI CAGNNNCTG 1 cut(s) 316
Ama87I CYCGRG 1 cut(s) 62
ApeKI GCWGC 1 cut(s) 94
ApoI RAATTY 1 cut(s) 526
ArsI GACNNNNNNTTYG 2 cut(s) 438, 470
Asp700I GAANNNNTTC 2 cut(s) 138, 279
AspLEI GCGC 1 cut(s) 495
AvaI CYCGRG 1 cut(s) 62
BaeI ACNNNNGTAYC 1 cut(s) 652
BanII GRGCYC 1 cut(s) 336
Bbv12I GWGCWC 2 cut(s) 336, 435
BbvI GCAGC 1 cut(s) 81
BccI CCATC 1 cut(s) 556
BciT130I CCWGG 1 cut(s) 646
BcoDI GTCTC 1 cut(s) 460
BfaI CTAG 2 cut(s) 216, 452
BisI GCNGC 2 cut(s) 95, 147
BlsI GCNGC 2 cut(s) 96, 148
Bme1390I CCNGG 1 cut(s) 646
BmeT110I CYCGRG 1 cut(s) 62
BmrFI CCNGG 1 cut(s) 646
BmsI GCATC 1 cut(s) 521
BpuEI CTTGAG 2 cut(s) 83, 320
Bsa29I ATCGAT 1 cut(s) 637
BsaJI CCNNGG 2 cut(s) 63, 645
BsaXI ACNNNNNCTCC 2 cut(s) 425, 455
Bse1I ACTGG 1 cut(s) 27
BseBI CCWGG 1 cut(s) 646
BseCI ATCGAT 1 cut(s) 637
BseDI CCNNGG 2 cut(s) 63, 645
BseGI GGATG 2 cut(s) 10, 641
BseMII CTCAG 1 cut(s) 471
BseNI ACTGG 1 cut(s) 27
BseXI GCAGC 1 cut(s) 81
BshVI ATCGAT 1 cut(s) 637
BsiHKAI GWGCWC 2 cut(s) 336, 435
BsiHKCI CYCGRG 1 cut(s) 62
BsmAI GTCTC 1 cut(s) 460
BsmI GAATGC 1 cut(s) 514
BsoBI CYCGRG 1 cut(s) 62
Bsp1286I GDGCHC 2 cut(s) 336, 435
Bsp143I GATC 4 cut(s) 286, 547, 610, 638
BspACI CCGC 3 cut(s) 146, 176, 272
BspCNI CTCAG 1 cut(s) 470
BspDI ATCGAT 1 cut(s) 637
BsrBI CCGCTC 1 cut(s) 146
BsrI ACTGG 1 cut(s) 27
BssECI CCNNGG 2 cut(s) 63, 645
BssMI GATC 4 cut(s) 286, 547, 610, 638
Bst2UI CCWGG 1 cut(s) 646
Bst4CI ACNGT 1 cut(s) 365
BstC8I GCNNGC 1 cut(s) 270
BstDEI CTNAG 2 cut(s) 14, 457
BstF5I GGATG 2 cut(s) 10, 641
BstHHI GCGC 1 cut(s) 495
BstKTI GATC 4 cut(s) 289, 550, 613, 641
BstMAI GTCTC 1 cut(s) 460
BstMBI GATC 4 cut(s) 286, 547, 610, 638
BstMWI GCNNNNNNNGC 1 cut(s) 38
BstNI CCWGG 1 cut(s) 646
BstSCI CCNGG 1 cut(s) 644
BstV1I GCAGC 1 cut(s) 81
Bsu15I ATCGAT 1 cut(s) 637
BsuTUI ATCGAT 1 cut(s) 637
BtsCI GGATG 2 cut(s) 10, 641
BtsI GCAGTG 1 cut(s) 502
BtsIMutI CAGTG 2 cut(s) 20, 502
Cac8I GCNNGC 1 cut(s) 270
CaiI CAGNNNCTG 1 cut(s) 316
CfoI GCGC 1 cut(s) 495
ClaI ATCGAT 1 cut(s) 637
CviAII CATG 2 cut(s) 179, 194
CviJI RGCY 8 cut(s) 203, 215, 316, 334, 374, 407, 582, 618
CviKI_1 RGCY 8 cut(s) 203, 215, 316, 334, 374, 407, 582, 618
DdeI CTNAG 2 cut(s) 14, 457
DpnI GATC 4 cut(s) 288, 549, 612, 640
DpnII GATC 4 cut(s) 286, 547, 610, 638
Ecl136II GAGCTC 1 cut(s) 334
Eco24I GRGCYC 1 cut(s) 336
Eco53kI GAGCTC 1 cut(s) 334
Eco88I CYCGRG 1 cut(s) 62
EcoICRI GAGCTC 1 cut(s) 334
EcoRI GAATTC 1 cut(s) 526
EcoRII CCWGG 1 cut(s) 644
EcoT22I ATGCAT 1 cut(s) 514
EcoT38I GRGCYC 1 cut(s) 336
FaeI CATG 2 cut(s) 182, 197
FaiI YATR 7 cut(s) 30, 171, 180, 195, 294, 537, 633
FatI CATG 2 cut(s) 178, 193
Fnu4HI GCNGC 2 cut(s) 95, 147
FokI GGATG 2 cut(s) 17, 628
FriOI GRGCYC 1 cut(s) 336
Fsp4HI GCNGC 2 cut(s) 95, 147
FspBI CTAG 2 cut(s) 216, 452
FspI TGCGCA 1 cut(s) 494
GlaI GCGC 1 cut(s) 494
GluI GCNGC 2 cut(s) 95, 147
HhaI GCGC 1 cut(s) 495
Hin1II CATG 2 cut(s) 182, 197
Hin6I GCGC 1 cut(s) 493
HinP1I GCGC 1 cut(s) 493
Hpy188I TCNGA 6 cut(s) 115, 460, 517, 552, 579, 615
Hpy188III TCNNGA 3 cut(s) 284, 356, 389
HpyAV CCTTC 1 cut(s) 421
HpyCH4III ACNGT 1 cut(s) 365
HpyCH4V TGCA 2 cut(s) 345, 512
HpyF10VI GCNNNNNNNGC 1 cut(s) 38
HpyF3I CTNAG 2 cut(s) 14, 457
Hsp92II CATG 2 cut(s) 182, 197
HspAI GCGC 1 cut(s) 493
Kzo9I GATC 4 cut(s) 286, 547, 610, 638
LmnI GCTCC 2 cut(s) 430, 615
LpnPI CCDG 7 cut(s) 8, 86, 102, 302, 341, 631, 658
Lsp1109I GCAGC 1 cut(s) 81
LweI GCATC 1 cut(s) 521
MaeI CTAG 2 cut(s) 216, 452
MaeIII GTNAC 1 cut(s) 365
MalI GATC 4 cut(s) 288, 549, 612, 640
MbiI CCGCTC 1 cut(s) 146
MboI GATC 4 cut(s) 286, 547, 610, 638
MboII GAAGA 4 cut(s) 146, 517, 578, 581
MfeI CAATTG 1 cut(s) 236
MhlI GDGCHC 2 cut(s) 336, 435
MluCI AATT 5 cut(s) 104, 236, 471, 526, 542
MnlI CCTC 7 cut(s) 58, 260, 266, 385, 421, 511, 542
Mph1103I ATGCAT 1 cut(s) 514
MroXI GAANNNNTTC 2 cut(s) 138, 279
MseI TTAA 2 cut(s) 51, 470
MspR9I CCNGG 1 cut(s) 646
MunI CAATTG 1 cut(s) 236
Mva1269I GAATGC 1 cut(s) 514
MvaI CCWGG 1 cut(s) 646
MwoI GCNNNNNNNGC 1 cut(s) 38
NdeII GATC 4 cut(s) 286, 547, 610, 638
NlaIII CATG 2 cut(s) 182, 197
NsbI TGCGCA 1 cut(s) 494
NsiI ATGCAT 1 cut(s) 514
PctI GAATGC 1 cut(s) 514
PdmI GAANNNNTTC 2 cut(s) 138, 279
PkrI GCNGC 2 cut(s) 96, 148
Psp124BI GAGCTC 1 cut(s) 336
Psp6I CCWGG 1 cut(s) 644
PspGI CCWGG 1 cut(s) 644
PstNI CAGNNNCTG 1 cut(s) 316
SacI GAGCTC 1 cut(s) 336
SaqAI TTAA 2 cut(s) 51, 470
SatI GCNGC 2 cut(s) 95, 147
Sau3AI GATC 4 cut(s) 286, 547, 610, 638
ScrFI CCNGG 1 cut(s) 646
SduI GDGCHC 2 cut(s) 336, 435
SfaNI GCATC 1 cut(s) 521
SmlI CTYRAG 2 cut(s) 98, 335
SmoI CTYRAG 2 cut(s) 98, 335
Sse9I AATT 5 cut(s) 104, 236, 471, 526, 542
SsiI CCGC 3 cut(s) 146, 176, 272
SspMI CTAG 2 cut(s) 216, 452
SstI GAGCTC 1 cut(s) 336
StyD4I CCNGG 1 cut(s) 644
TaaI ACNGT 1 cut(s) 365
TaqI TCGA 2 cut(s) 142, 637
TasI AATT 5 cut(s) 104, 236, 471, 526, 542
TauI GCSGC 1 cut(s) 149
Tru1I TTAA 2 cut(s) 51, 470
Tru9I TTAA 2 cut(s) 51, 470
TscAI CASTG 2 cut(s) 27, 502
TseI GCWGC 1 cut(s) 94
TspDTI ATGAA 6 cut(s) 21, 143, 195, 213, 539, 552
TspRI CASTG 2 cut(s) 27, 502
XapI RAATTY 1 cut(s) 526
XmnI GAANNNNTTC 2 cut(s) 138, 279
XspI CTAG 2 cut(s) 216, 452
Zsp2I ATGCAT 1 cut(s) 514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.