Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0009486

Physical Location & Seq

Genomic Coordinates Forward (+)

15601822 .. 15607348

Gene Structure 5527 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g13130.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3108 bp

ATGGCACTCACCCCTGATCACACTAGGAAAGTTGGGATGGGGGTGTCACCATCCCCTTCTCCTTTTCTTACTCCTCGTCCTGAAAGGCGGCGCAAAACTCTTGAGTACAATCCAAATCGACAGGACAAGGATAAAGAGGTTAACGTGCAAGTTTTGCTGAGATGCAGGCCATTAAGTGATGAAGAGCAAAAGTTGAATGTCCAGAAGGTGGTATCCTGTAATGAACAGAAAAGAGAGGTCACTGTTATGCAAAGTCTAAATAATAAGCAAGTCGATAAATTGTTCACTTTTGACAGGGTTTTTGGACCAAAAGCACAGCAAAAATCAATATATGAGCAGGCCATTTCCCCGATAGTTAAAGAAGCTCTTGACGGATTCAACTGCACTGTCTTTGCTTATGGGCAGACGGGCACTGGTAAAACTTATACAATGGAAGGCGGGATGAGAAATAAGAGTGGCAATTTGCCTACTGAGGCTGGTGTTATTCCACGGGCTATTCGTCAAATTTTTGATACACTTGAAGCACAAGATGCTGACTATAGTGTGAAAGTAACGTTCTTGGAAATATATAATGAAGAAATAACTGATTTACTAGCTCCTGATGAGAATCCAAGAACTGCAGACGACAGGCAAAAGAAATCTATTTCGTTGATGGAGGATGGGAAGGGTTGTGTAATAGTAAGAGGCCTTGAAGAAGAATATGTGTATAGCGTAAATGAAATTTATAGTCTCTTGGAACGAGGGTCTTCCAAACGGCGTACAGCAGACACTCTGATGAACAAGCGCAGCAGTCGCTCTCATTCTGTCTTTTCCATTACTGTCCACATAAAAGAAGCAACAGTTGGTGATGAGGAGCTAATTAAATGTGGCAAAATTAATCTAGTGGATCTGGCAGGATCGGAAAACATATCTCGTTCAGGTGCACGAGAGGGACGTGCAAGAGAAGCAGGGGAAATAAATAAGAGCTTGCTCACGCTGGGCCGCGTCATAAATGCACTAGTGGAACATTCCACTCATATACCTTACAGGGACAGTAAGCTTACAAGACTTTTAAGAGATTCTTTGGGAGGGAAAACAAAAACCTGCATCATTGCCACAATTTCTCCAACTGCTTCATGCATGGAGGAAACTCTAAGCACACTGGATTACGCCTATCGTGCCAAGAACATTAAAAACAAACCCGAGGCAAACCAGAAAATGTCAAAGCCTGTGCTGCTTAAGGAATTGTATTCAGAGATTGAGAGAATGAAAGAAGATATCCGAGCAGCACGGGAAAAGAATGGTGTTTATATTCCACATGAAAGATTTGTCCAGGATGAAGCTGAAAAAAAGGCTAGGATTGAGAGAATAGAGCAATTGGAGAATGACCTCAACCTCACAGAAAAGCAAGCGGATCGTTTTCATGAGCTCTATATCAGTGAACAAGAACAGAAGTTGGATTTACAAAGTGAGCTCAAGGACTGCAAGATAAATCTGGATAACTGTAACAAGGCTCTGCTTGAACTTCAAGAGGATTACCAAATAGCCACCTCAACCCTGAAAGAGAAGGAGCGTATCATCTCCAAATTGCTATTCTCAGAAAATCTTTTGATTGGACGGGCAAAGGAGTTGCGCAGTGATTTGAAGAATGCATCAGAGGAAATGAATTCCCTCTATGAAAAATTAGATAAGAAAGACAAGATGGAAGCAGAAAATCAGAGCTTGGTTATGACATTTGGTTCTCAGCTTGATCGAAGTTTGAAAGACCTGCATAAGACCATCCTAGGGTCTGTTTCTCAACAGCAGTATCAACTAAGATGCATGGAGGAACATGTTCAGTCATACCTTGCAAGTAAATGTGATGCAGCACAGGTGCTGGAATCCAGGATTAAGAAGATAACAGAGACATATAGTTCTGGAGTAACAGCCTTGAAGGAGCTGGCCAACATGCTGCAAAAGAAAGCATCATCTGACCTGGAGCAAATAAATGCTAAGATGATATCACAGACAGTGGCTGTTGAGAAGTTTCTTGAAACTGCGGTTAAGGAAGCCAACGAGGTCATCCAAGATGTTCAGCACTCTCTTGATGAGCAGAAACAGCTATTGGCTTTCTCCGCTCAACAACAAGAGGAGGGATTGCAAAGAAGCTTGATGTCAGCACAAGTAATTTCGATGGCCACTGGGAACTTTTTTGATGACCTCCAGGACCGCACTTGTCAAGTCATGAGAAATCTTGAAGAAACCCAAATTCAACGAGTCAACCAATTGGTGAATTTTGAGAAAATGTTTAAGGAAGAAGCTTCTAGAGAGGAAAAACAGGCCATGGAAAAAATTGCAATAATAATTGGAACATTGACATCTAAAAAAGCCTCTATGGTATCGGAGGCATCAACCGACATCCAGGAAAAGAGTAAAGAAGAGAACACCAGGTTGCAAAAGGCAATGTTTAACATGCAAAAAGTGGCAACGGATGCTAGGAAGGAGTTGAGCGAATATTTCGGAAAGGTGGAATGTGATTTTATGAAAGACACATTCTCAGCAGTTGAATCTCAGGCAATCATGGAAAACTGCATCCAAGAGTGCTCAGAGAGAGTGGGTTACTCTAGCAAACAGTGGGAAAATGCCCAGTCGGCCATAAATACTCTTAATCAGAACAGTGCTGCAAATATCAAATCTACTGTGAAGGAAAATATCTCTGCTAATCATTCTGCACATGAAAAGTTTGTTTCCGCATCTTCCCGTGTGGATTCAGATTTCAATGCTTTAGCCACCGACACATTGTCATGCGTTAATGATTCGCTAATGCTGGACTATGAAAAGACCAAGGAAATAGACTCCGTGACTGCTGTGTGTGTGGATCAACTCAAATCAGCACAAGAAAAGCATGGTGATGGTGTATCAACTATACGAAATCAAGCAGAAAAGTGTCTTGTACAAGATTATTTGGTGGATAAGCATGCCGGGGCAACCAAGAAACAAGTCATAGCTGTCCCCAGCTTGGAATCTATCGAGGAGATGAGAAGCTCCGTCGATGTCAAAGAAGACGGTACATCTGATAACAAATTGAAACGGAGCCAAATGGAAATCAAGATCGCGGGTCCTAGAACTCCTTTTGCGGATGTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0008574 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1036

Amino Acids

116.91

Weight (kDa)

5.74

Isoelectric Point (pI)

46.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37420 AT2G37420
fragaria_vesca	FvH4_6g14420
malus_domestica	MD04G1119500.v1.1 MD12G1136800.v1.1
prunus_persica	Prupe.6G249200_v2.0.a1
pyrus_communis	pycom04g10890 pycom04g10900 pycom12g13130
rosa_chinensis	RchiOBHm_Chr3g0467551
rosa_laevigata	RLG00000024492
rosa_multiflora	Rmu_sc0000286.1_g000001 Rmu_sc0027582.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413600
rosa_rugosa	Rorug03G0087900 Rorug03G0088000 Rorug03G0088100
rosa_samantha	Rh3AG135900 Rh3BG157700 Rh3CG157600 Rh3DG158500
rosa_wichuraiana	Rw3G012910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1613
Acc36I	ACCTGC	2 cut(s)	1091, 1755
AccB7I	CCANNNNNTGG	1 cut(s)	208
AccBSI	CCGCTC	1 cut(s)	2096
AccII	CGCG	2 cut(s)	984, 3074
AclI	AACGTT	1 cut(s)	554
AclWI	GGATC	4 cut(s)	894, 904, 1401, 2844
AcoI	YGGCCR	3 cut(s)	1920, 2154, 2610
AcsI	RAATTY	5 cut(s)	504, 720, 1645, 2226, 2251
AfaI	GTAC	4 cut(s)	107, 760, 2913, 3028
AfiI	CCNNNNNNNGG	3 cut(s)	208, 1764, 2977
AflII	CTTAAG	1 cut(s)	1217
AflIII	ACRYGT	1 cut(s)	1810
AhdI	GACNNNNNGTC	1 cut(s)	2758
AhlI	ACTAGT	1 cut(s)	997
AjiI	CACGTC	1 cut(s)	935
AjnI	CCWGG	6 cut(s)	1311, 1862, 1953, 2181, 2379, 2405
AjuI	GAANNNNNNNTTGG	6 cut(s)	825, 857, 1556, 1588, 2066, 2098
Alw21I	GWGCWC	4 cut(s)	925, 1410, 1455, 2564
Alw26I	GTCTC	2 cut(s)	734, 1877
Alw44I	GTGCAC	1 cut(s)	921
AlwI	GGATC	4 cut(s)	894, 904, 1401, 2844
AlwNI	CAGNNNCTG	2 cut(s)	1855, 1994
Ama87I	CYCGRG	1 cut(s)	1181
AoxI	GGCC	8 cut(s)	167, 339, 685, 979, 1920, 2154, 2298, 2610
ApaLI	GTGCAC	1 cut(s)	921
ApeKI	GCWGC	6 cut(s)	786, 1213, 1265, 1844, 1930, 2639
ApoI	RAATTY	5 cut(s)	504, 720, 1645, 2226, 2251
ArsI	GACNNNNNNTTYG	2 cut(s)	284, 316
AseI	ATTAAT	1 cut(s)	876
Asp700I	GAANNNNTTC	1 cut(s)	1812
AspA2I	CCTAGG	1 cut(s)	1762
AspLEI	GCGC	3 cut(s)	93, 786, 1614
AspS9I	GGNCC	4 cut(s)	305, 979, 2185, 3077
AsuC2I	CCSGG	1 cut(s)	2941
AsuHPI	GGTGA	4 cut(s)	39, 857, 2260, 2879
AvaI	CYCGRG	1 cut(s)	1181
AvaII	GGWCC	3 cut(s)	305, 2185, 3077
AvrII	CCTAGG	1 cut(s)	1762
BaeGI	GKGCMC	2 cut(s)	413, 925
BaeI	ACNNNNGTAYC	2 cut(s)	1769, 1802
BalI	TGGCCA	2 cut(s)	1922, 2156
BanII	GRGCYC	2 cut(s)	1410, 1455
BauI	CACGAG	1 cut(s)	924
BbsI	GAAGAC	2 cut(s)	738, 3027
Bbv12I	GWGCWC	4 cut(s)	925, 1410, 1455, 2564
BbvI	GCAGC	6 cut(s)	798, 1200, 1277, 1856, 1917, 2626
BccI	CCATC	8 cut(s)	31, 58, 646, 653, 1675, 1766, 2146, 2864
BceAI	ACGGC	1 cut(s)	770
BcgI	CGANNNNNNTGC	2 cut(s)	1376, 1410
BciT130I	CCWGG	6 cut(s)	1313, 1864, 1955, 2183, 2381, 2407
BciVI	GTATCC	1 cut(s)	223
BclI	TGATCA	1 cut(s)	16
BcnI	CCSGG	1 cut(s)	2941
BcoDI	GTCTC	2 cut(s)	734, 1877
BcuI	ACTAGT	1 cut(s)	997
BfmI	CTRYAG	2 cut(s)	538, 618
BfrI	CTTAAG	1 cut(s)	1217
BfuAI	ACCTGC	2 cut(s)	1091, 1755
BfuI	GTATCC	1 cut(s)	223
BglI	GCCNNNNNGGC	1 cut(s)	2609
BisI	GCNGC	8 cut(s)	89, 787, 982, 1214, 1266, 1845, 1931, 2640
BlnI	CCTAGG	1 cut(s)	1762
BlsI	GCNGC	8 cut(s)	90, 788, 983, 1215, 1267, 1846, 1932, 2641
Bme1390I	CCNGG	7 cut(s)	1313, 1864, 1955, 2183, 2381, 2407, 2941
Bme18I	GGWCC	3 cut(s)	305, 2185, 3077
BmeRI	GACNNNNNGTC	1 cut(s)	2758
BmeT110I	CYCGRG	1 cut(s)	1181
BmgBI	CACGTC	1 cut(s)	935
BmgT120I	GGNCC	4 cut(s)	305, 979, 2185, 3077
BmiI	GGNNCC	2 cut(s)	3053, 3078
BmrFI	CCNGG	7 cut(s)	1313, 1864, 1955, 2183, 2381, 2407, 2941
BmrI	ACTGGG	2 cut(s)	2169, 2599
BmuI	ACTGGG	2 cut(s)	2169, 2599
BpiI	GAAGAC	2 cut(s)	738, 3027
BpmI	CTGGAG	3 cut(s)	1917, 1976, 2165
BpuEI	CTTGAG	2 cut(s)	122, 1439
BpuMI	CCSGG	1 cut(s)	2941
BsaBI	GATNNNNATC	1 cut(s)	606
BsaJI	CCNNGG	6 cut(s)	488, 1182, 1762, 2301, 2802, 2940
BsaXI	ACNNNNNCTCC	2 cut(s)	1087, 1117
Bsc4I	CCNNNNNNNGG	3 cut(s)	208, 1764, 2977
Bse1I	ACTGG	4 cut(s)	418, 1146, 2164, 2605
Bse3DI	GCAATG	2 cut(s)	1089, 2427
Bse8I	GATNNNNATC	1 cut(s)	606
BseBI	CCWGG	6 cut(s)	1313, 1864, 1955, 2183, 2381, 2407
BseDI	CCNNGG	6 cut(s)	488, 1182, 1762, 2301, 2802, 2940
BseJI	GATNNNNATC	1 cut(s)	606
BseLI	CCNNNNNNNGG	3 cut(s)	208, 1764, 2977
BseMI	GCAATG	2 cut(s)	1089, 2427
BseMII	CTCAG	7 cut(s)	149, 462, 1590, 1736, 2529, 2543, 2577
BseNI	ACTGG	4 cut(s)	418, 1146, 2164, 2605
BseRI	GAGGAG	4 cut(s)	63, 866, 2123, 3005
BseSI	GKGCMC	2 cut(s)	413, 925
BseXI	GCAGC	6 cut(s)	798, 1200, 1277, 1856, 1917, 2626
BseYI	CCCAGC	2 cut(s)	976, 2972
BsgI	GTGCAG	2 cut(s)	367, 2673
Bsh1236I	CGCG	2 cut(s)	984, 3074
BshFI	GGCC	8 cut(s)	169, 341, 687, 981, 1922, 2156, 2300, 2612
BsiHKAI	GWGCWC	4 cut(s)	925, 1410, 1455, 2564
BsiHKCI	CYCGRG	1 cut(s)	1181
BsiSI	CCGG	1 cut(s)	2940
BslFI	GGGAC	3 cut(s)	945, 1043, 2954
BslI	CCNNNNNNNGG	3 cut(s)	208, 1764, 2977
BsmAI	GTCTC	2 cut(s)	734, 1877
BsmFI	GGGAC	3 cut(s)	945, 1043, 2954
BsmI	GAATGC	1 cut(s)	1633
BsnI	GGCC	8 cut(s)	169, 341, 687, 981, 1922, 2156, 2300, 2612
BsoBI	CYCGRG	1 cut(s)	1181
Bsp1286I	GDGCHC	5 cut(s)	413, 925, 1410, 1455, 2564
Bsp1407I	TGTACA	1 cut(s)	2911
Bsp143I	GATC	7 cut(s)	16, 886, 896, 1393, 1729, 2836, 3069
Bsp19I	CCATGG	1 cut(s)	2301
BspANI	GGCC	8 cut(s)	169, 341, 687, 981, 1922, 2156, 2300, 2612
BspCNI	CTCAG	7 cut(s)	150, 463, 1589, 1735, 2528, 2542, 2576
BspFNI	CGCG	2 cut(s)	984, 3074
BspHI	TCATGA	2 cut(s)	1402, 2202
BspLI	GGNNCC	2 cut(s)	3053, 3078
BspMAI	CTGCAG	1 cut(s)	622
BspMI	ACCTGC	2 cut(s)	1091, 1755
BspPI	GGATC	4 cut(s)	894, 904, 1401, 2844
BspQI	GCTCTTC	1 cut(s)	177
BspTI	CTTAAG	1 cut(s)	1217
BsrBI	CCGCTC	1 cut(s)	2096
BsrDI	GCAATG	2 cut(s)	1089, 2427
BsrGI	TGTACA	1 cut(s)	2911
BsrI	ACTGG	4 cut(s)	418, 1146, 2164, 2605
BssECI	CCNNGG	6 cut(s)	488, 1182, 1762, 2301, 2802, 2940
BssMI	GATC	7 cut(s)	16, 886, 896, 1393, 1729, 2836, 3069
BssSI	CACGAG	1 cut(s)	924
BssT1I	CCWWGG	3 cut(s)	1762, 2301, 2802
Bst2BI	CACGAG	1 cut(s)	924
Bst2UI	CCWGG	6 cut(s)	1313, 1864, 1955, 2183, 2381, 2407
Bst6I	CTCTTC	2 cut(s)	177, 2391
BstAFI	CTTAAG	1 cut(s)	1217
BstAPI	GCANNNNNTGC	3 cut(s)	154, 530, 2450
BstAUI	TGTACA	1 cut(s)	2911
BstC8I	GCNNGC	6 cut(s)	167, 339, 968, 1389, 1920, 2937
BstDSI	CCRYGG	2 cut(s)	488, 2301
BstFNI	CGCG	2 cut(s)	984, 3074
BstHHI	GCGC	3 cut(s)	93, 786, 1614
BstKTI	GATC	7 cut(s)	19, 889, 899, 1396, 1732, 2839, 3072
BstMAI	GTCTC	2 cut(s)	734, 1877
BstMBI	GATC	7 cut(s)	16, 886, 896, 1393, 1729, 2836, 3069
BstNI	CCWGG	6 cut(s)	1313, 1864, 1955, 2183, 2381, 2407
BstNSI	RCATGY	4 cut(s)	1814, 1930, 2434, 2939
BstSCI	CCNGG	7 cut(s)	1311, 1862, 1953, 2181, 2379, 2405, 2939
BstSFI	CTRYAG	2 cut(s)	538, 618
BstSLI	GKGCMC	2 cut(s)	413, 925
BstUI	CGCG	2 cut(s)	984, 3074
BstV1I	GCAGC	6 cut(s)	798, 1200, 1277, 1856, 1917, 2626
BstV2I	GAAGAC	2 cut(s)	738, 3027
BstX2I	RGATCY	1 cut(s)	886
BstYI	RGATCY	1 cut(s)	886
BsuI	GTATCC	1 cut(s)	223
BsuRI	GGCC	8 cut(s)	169, 341, 687, 981, 1922, 2156, 2300, 2612
BtgI	CCRYGG	2 cut(s)	488, 2301
BtrI	CACGTC	1 cut(s)	935
BtsI	GCAGTG	1 cut(s)	1621
BveI	ACCTGC	2 cut(s)	1091, 1755
Cac8I	GCNNGC	6 cut(s)	167, 339, 968, 1389, 1920, 2937
CaiI	CAGNNNCTG	2 cut(s)	1855, 1994
CciI	TCATGA	2 cut(s)	1402, 2202
CfoI	GCGC	3 cut(s)	93, 786, 1614
Cfr13I	GGNCC	4 cut(s)	305, 979, 2185, 3077
CseI	GACGC	1 cut(s)	973
CsiI	ACCWGGT	1 cut(s)	2405
Csp6I	GTAC	4 cut(s)	106, 759, 2912, 3027
CviQI	GTAC	4 cut(s)	106, 759, 2912, 3027
DpnI	GATC	7 cut(s)	18, 888, 898, 1395, 1731, 2838, 3071
DpnII	GATC	7 cut(s)	16, 886, 896, 1393, 1729, 2836, 3069
DriI	GACNNNNNGTC	1 cut(s)	2758
EaeI	YGGCCR	3 cut(s)	1920, 2154, 2610
Eam1104I	CTCTTC	2 cut(s)	177, 2391
Eam1105I	GACNNNNNGTC	1 cut(s)	2758
EarI	CTCTTC	2 cut(s)	177, 2391
Ecl136II	GAGCTC	2 cut(s)	1408, 1453
Eco130I	CCWWGG	3 cut(s)	1762, 2301, 2802
Eco147I	AGGCCT	1 cut(s)	687
Eco24I	GRGCYC	2 cut(s)	1410, 1455
Eco32I	GATATC	2 cut(s)	1258, 1980
Eco47I	GGWCC	3 cut(s)	305, 2185, 3077
Eco53kI	GAGCTC	2 cut(s)	1408, 1453
Eco88I	CYCGRG	1 cut(s)	1181
EcoICRI	GAGCTC	2 cut(s)	1408, 1453
EcoO109I	RGGNCCY	1 cut(s)	3077
EcoRI	GAATTC	1 cut(s)	1645
EcoRII	CCWGG	6 cut(s)	1311, 1862, 1953, 2181, 2379, 2405
EcoRV	GATATC	2 cut(s)	1258, 1980
EcoT14I	CCWWGG	3 cut(s)	1762, 2301, 2802
EcoT22I	ATGCAT	3 cut(s)	1121, 1633, 1802
EcoT38I	GRGCYC	2 cut(s)	1410, 1455
ErhI	CCWWGG	3 cut(s)	1762, 2301, 2802
FalI	AAGNNNNNCTT	4 cut(s)	351, 383, 1045, 1077
FaqI	GGGAC	3 cut(s)	945, 1043, 2954
FauI	CCCGC	2 cut(s)	431, 3067
FbaI	TGATCA	1 cut(s)	16
Fnu4HI	GCNGC	8 cut(s)	89, 787, 982, 1214, 1266, 1845, 1931, 2640
FriOI	GRGCYC	2 cut(s)	1410, 1455
Fsp4HI	GCNGC	8 cut(s)	89, 787, 982, 1214, 1266, 1845, 1931, 2640
FspI	TGCGCA	1 cut(s)	1613
GlaI	GCGC	3 cut(s)	92, 785, 1613
GluI	GCNGC	8 cut(s)	89, 787, 982, 1214, 1266, 1845, 1931, 2640
GsaI	CCCAGC	2 cut(s)	980, 2976
GsuI	CTGGAG	3 cut(s)	1917, 1976, 2165
HaeIII	GGCC	8 cut(s)	169, 341, 687, 981, 1922, 2156, 2300, 2612
HapII	CCGG	1 cut(s)	2940
HgaI	GACGC	1 cut(s)	973
HhaI	GCGC	3 cut(s)	93, 786, 1614
Hin6I	GCGC	3 cut(s)	91, 784, 1612
HinP1I	GCGC	3 cut(s)	91, 784, 1612
HincII	GTYRAC	3 cut(s)	142, 2239, 3103
HindII	GTYRAC	3 cut(s)	142, 2239, 3103
HindIII	AAGCTT	3 cut(s)	1037, 2125, 2277
HpaI	GTTAAC	1 cut(s)	142
HpaII	CCGG	1 cut(s)	2940
HphI	GGTGA	4 cut(s)	39, 857, 2260, 2879
Hpy166II	GTNNAC	7 cut(s)	142, 285, 823, 923, 1421, 2239, 3103
Hpy8I	GTNNAC	7 cut(s)	142, 285, 823, 923, 1421, 2239, 3103
Hpy99I	CGWCG	1 cut(s)	3011
HpyAV	CCTTC	8 cut(s)	66, 199, 428, 658, 1540, 1906, 2452, 2656
HpyCH4IV	ACGT	3 cut(s)	144, 554, 934
HpySE526I	ACGT	3 cut(s)	144, 554, 934
HspAI	GCGC	3 cut(s)	91, 784, 1612
Ksp22I	TGATCA	1 cut(s)	16
KspAI	GTTAAC	1 cut(s)	142
Kzo9I	GATC	7 cut(s)	16, 886, 896, 1393, 1729, 2836, 3069
LguI	GCTCTTC	1 cut(s)	177
LmnI	GCTCC	7 cut(s)	601, 853, 1549, 1915, 1957, 3008, 3051
Lsp1109I	GCAGC	6 cut(s)	798, 1200, 1277, 1856, 1917, 2626
MabI	ACCWGGT	1 cut(s)	2405
MaeII	ACGT	3 cut(s)	144, 554, 934
MaeIII	GTNAC	7 cut(s)	45, 238, 550, 1484, 1900, 2576, 2818
MalI	GATC	7 cut(s)	18, 888, 898, 1395, 1731, 2838, 3071
MbiI	CCGCTC	1 cut(s)	2096
MboI	GATC	7 cut(s)	16, 886, 896, 1393, 1729, 2836, 3069
MfeI	CAATTG	2 cut(s)	1355, 2243
MflI	RGATCY	1 cut(s)	886
MhlI	GDGCHC	5 cut(s)	413, 925, 1410, 1455, 2564
MlsI	TGGCCA	2 cut(s)	1922, 2156
MluNI	TGGCCA	2 cut(s)	1922, 2156
MlyI	GAGTC	2 cut(s)	2244, 2807
MmeI	TCCRAC	2 cut(s)	1130, 1416
Mox20I	TGGCCA	2 cut(s)	1922, 2156
Mph1103I	ATGCAT	3 cut(s)	1121, 1633, 1802
MroXI	GAANNNNTTC	1 cut(s)	1812
MscI	TGGCCA	2 cut(s)	1922, 2156
MslI	CAYNNNNRTG	4 cut(s)	245, 773, 2761, 2868
Msp20I	TGGCCA	2 cut(s)	1922, 2156
MspCI	CTTAAG	1 cut(s)	1217
MspI	CCGG	1 cut(s)	2940
MspR9I	CCNGG	7 cut(s)	1313, 1864, 1955, 2183, 2381, 2407, 2941
MunI	CAATTG	2 cut(s)	1355, 2243
Mva1269I	GAATGC	1 cut(s)	1633
MvaI	CCWGG	6 cut(s)	1313, 1864, 1955, 2183, 2381, 2407
MvnI	CGCG	2 cut(s)	984, 3074
NciI	CCSGG	1 cut(s)	2941
NcoI	CCATGG	1 cut(s)	2301
NdeII	GATC	7 cut(s)	16, 886, 896, 1393, 1729, 2836, 3069
NlaIV	GGNNCC	2 cut(s)	3053, 3078
NmuCI	GTSAC	3 cut(s)	45, 238, 2818
NsbI	TGCGCA	1 cut(s)	1613
NsiI	ATGCAT	3 cut(s)	1121, 1633, 1802
NspI	RCATGY	4 cut(s)	1814, 1930, 2434, 2939
PaeI	GCATGC	1 cut(s)	2939
PagI	TCATGA	2 cut(s)	1402, 2202
PceI	AGGCCT	1 cut(s)	687
PciI	ACATGT	1 cut(s)	1810
PciSI	GCTCTTC	1 cut(s)	177
PcsI	WCGNNNNNNNCGW	2 cut(s)	496, 931
PctI	GAATGC	1 cut(s)	1633
PdmI	GAANNNNTTC	1 cut(s)	1812
PfeI	GAWTC	8 cut(s)	375, 607, 1058, 1859, 2525, 2726, 2774, 2981
PflMI	CCANNNNNTGG	1 cut(s)	208
PfoI	TCCNGGA	4 cut(s)	1311, 1862, 2181, 2379
PkrI	GCNGC	8 cut(s)	90, 788, 983, 1215, 1267, 1846, 1932, 2641
PleI	GAGTC	2 cut(s)	2243, 2807
PpsI	GAGTC	2 cut(s)	2243, 2807
PpuMI	RGGWCCY	1 cut(s)	3077
PscI	ACATGT	1 cut(s)	1810
PshBI	ATTAAT	1 cut(s)	876
Psp124BI	GAGCTC	2 cut(s)	1410, 1455
Psp1406I	AACGTT	1 cut(s)	554
Psp5II	RGGWCCY	1 cut(s)	3077
Psp6I	CCWGG	6 cut(s)	1311, 1862, 1953, 2181, 2379, 2405
PspFI	CCCAGC	2 cut(s)	976, 2972
PspGI	CCWGG	6 cut(s)	1311, 1862, 1953, 2181, 2379, 2405
PspN4I	GGNNCC	2 cut(s)	3053, 3078
PspPI	GGNCC	4 cut(s)	305, 979, 2185, 3077
PspPPI	RGGWCCY	1 cut(s)	3077
PstI	CTGCAG	1 cut(s)	622
PstNI	CAGNNNCTG	2 cut(s)	1855, 1994
PsuI	RGATCY	1 cut(s)	886
RsaI	GTAC	4 cut(s)	107, 760, 2913, 3028
RsaNI	GTAC	4 cut(s)	106, 759, 2912, 3027
RseI	CAYNNNNRTG	4 cut(s)	245, 773, 2761, 2868
SacI	GAGCTC	2 cut(s)	1410, 1455
SapI	GCTCTTC	1 cut(s)	177
SatI	GCNGC	8 cut(s)	89, 787, 982, 1214, 1266, 1845, 1931, 2640
Sau3AI	GATC	7 cut(s)	16, 886, 896, 1393, 1729, 2836, 3069
Sau96I	GGNCC	4 cut(s)	305, 979, 2185, 3077
SchI	GAGTC	2 cut(s)	2244, 2807
ScrFI	CCNGG	7 cut(s)	1313, 1864, 1955, 2183, 2381, 2407, 2941
SduI	GDGCHC	5 cut(s)	413, 925, 1410, 1455, 2564
SexAI	ACCWGGT	1 cut(s)	2405
SfcI	CTRYAG	2 cut(s)	538, 618
SinI	GGWCC	3 cut(s)	305, 2185, 3077
SmiMI	CAYNNNNRTG	4 cut(s)	245, 773, 2761, 2868
SmlI	CTYRAG	3 cut(s)	101, 1217, 1454
SmoI	CTYRAG	3 cut(s)	101, 1217, 1454
SpeI	ACTAGT	1 cut(s)	997
SphI	GCATGC	1 cut(s)	2939
SseBI	AGGCCT	1 cut(s)	687
SspI	AATATT	1 cut(s)	2474
SstI	GAGCTC	2 cut(s)	1410, 1455
StuI	AGGCCT	1 cut(s)	687
StyD4I	CCNGG	7 cut(s)	1311, 1862, 1953, 2181, 2379, 2405, 2939
StyI	CCWWGG	3 cut(s)	1762, 2301, 2802
TaiI	ACGT	3 cut(s)	147, 557, 937
TaqI	TCGA	6 cut(s)	118, 273, 1732, 2150, 2988, 3009
TatI	WGTACW	2 cut(s)	105, 2911
TauI	GCSGC	2 cut(s)	91, 984
TfiI	GAWTC	8 cut(s)	375, 607, 1058, 1859, 2525, 2726, 2774, 2981
TseFI	GTSAC	3 cut(s)	45, 238, 2818
TseI	GCWGC	6 cut(s)	786, 1213, 1265, 1844, 1930, 2639
Tsp45I	GTSAC	3 cut(s)	45, 238, 2818
TspGWI	ACGGA	5 cut(s)	387, 2462, 2806, 2995, 3064
Van91I	CCANNNNNTGG	1 cut(s)	208
Vha464I	CTTAAG	1 cut(s)	1217
VneI	GTGCAC	1 cut(s)	921
VpaK11BI	GGWCC	3 cut(s)	305, 2185, 3077
VspI	ATTAAT	1 cut(s)	876
XapI	RAATTY	5 cut(s)	504, 720, 1645, 2226, 2251
XbaI	TCTAGA	1 cut(s)	2282
XceI	RCATGY	4 cut(s)	1814, 1930, 2434, 2939
XmaJI	CCTAGG	1 cut(s)	1762
XmnI	GAANNNNTTC	1 cut(s)	1812
Zsp2I	ATGCAT	3 cut(s)	1121, 1633, 1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.