Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0009486

Physical Location & Seq

Genomic Coordinates Reverse (-)

11850161 .. 11857256

Gene Structure 7096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG135900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGACGTCAGTGACGCCTGATTCTAGGAAAGTTGGGACGGGGATGGCAGCATCCCCATCTCCTTTTCTCACGCCTCGGCCCGAAAAGCGGCGTGGTACTCTTGATTGGAATTCGAATCACAAGGATAAGGATAAGGAAGTTAATGTGCAAGTTGTGCTCAGATGCAGGCCATTAAGTGATGAGGAGCAAAAGTCGCATGTTCAGAAGGTGGTATCATGTAATGAAACAAAAAGAGAAGTCACTGTTTTGCACAGTCTAAATAACAAGCCAATAGACAAAGTTTTCACTTTTGACAAGGTTTTCGGTCCAAAAGCACAGCAAAAGTCAATATATGAACAAGCCATTTCCCCTATTGTGAATGAAGTTCTTGATGGTTTCAACTGCACTGTATTTGCATATGGGCAGACAGGCACCGGTAAAACTTATACAATGGAAGGTGGGATGAGAAAAAAGAATGGCAATTTACCTGCTGAGGCTGGTGTAATTCCACGGGCTGTTCATCAGATTTTTGATACACTCGAAGCACAAAATGCAGACTACAGCCTGAGAGTGACATTCTTGGAACTATATAATGAAGAAATAACTGATTTACTAGCTCCAGAGGACCACTCAAGAACTTCTGAAGACAGGCAAAAGAAACCTATTTCCTTGATGGAGGATGGAAAGGGTTGTGTGATCGTGAGAGGCCTCGAAGAAGAACCTGTGTATACTGTAAATGAAATTTATACTCTGTTGGAAAGGGGGGCTGCCAAGAGGCGTACAGCAGACACTCTTCTGAACAAGCGCAGCAGTCGCTCTCATTCCGTCTTTTCCATTACTGTCCATATAAAAGAAGCAACAGTTGGTGATGAGGAGCTAATTAAATGCGGCAAACTTAATCTTGTTGATTTGGCAGGATCAGAAAACATATCTCGTTCAGGTGCACGTGAGGCTCGTGCAAGAGAAGCAGGAGAGATAAATAAGAGCTTACTCACCTTAGGCCGTGTCATAAATGCACTAGTGGAGCATTCCACTCATATACCTTACAGGGACAGTAAGCTTACAAGACTTTTAAGAGAATCACTAGGAGGCAAAACAAAAACTTGCATCATCGCCACAATTTCTCCTTGTTTTCATTTCGTGGATGAGACTCTAAGCACACTAGATTATGCCCATCGTGCCAAGAACATCAAAAACAGACCTGAGGCAAACCAGAAAATGTCAAAAACAGTGCTGCTTAAGGATTTGTATATAGAGATTGAGAGAATGAAAGAAGATATTCGGGCAGCACGTGAAAAGAATGGTGTTTATATTCCACGTGAAAGATTTGTCCTGGAAGAAGCTGAGAAGAAGGCTAGGGTTGAGAGAATAGAGCAATTGGAGAATGACCTCAACCTCTCAGAAAAGCAAGTGGAAAAGTTTCGTGAGCTCTATCTCAGCGAGCAAGAACAGAAATTGGATTTCCAAAGTGAGCTCAAGGACTGTAAGATAAATCTGGAAAATAGTAACAAGGCATTGCTTGAACTTCAAGAGAATCACCGGGTAGCCATCTTAACCCTAAAAGAGAAGGAGCATATCATCTCCAAACTGCTATCCTCAGAAAATCTTATAATTGGACGAGCAAAGGAGTTACGCACTGATCTACAGACTGCATCAGAGGATATAAGTTCGCTACATGAAAAATTAGATCAGAAAGACAGAATGGAGGAAGAAAATCAAGGCTTGGTTTTGACATTTGGTTCTCAGCTTGACCGGAGTTTAAAAGATCTGCATAAGACCATCTTAGGGTCTGTTTCTCAACAGAAGAACCAACTAAGATGCATGGAGGAGCATGTTCACTCATACCTTGCGAGTAAATGTGATGCAACAAAGGTATTGGAATCAAGGATTAAGAAAATATCAGAGACATACAGTTCTGGAGTATCAGCCTTGAAGGAGCTTGCCAACGTGCTGCAAATGAAAGCATCATCTGACTTGGAGCAGCTAAATAGTAAAACATTATCACAGACAGTGGCTGTTGAGAAGTTTCTTGGATCTGCGGTTACGGAGGCCAACGAGGTCATCCAAGATATTCAGCAGTCTATTGTTGAGCATAAACAGCTATTGGCTTTCTCCACTCAGCAACACGAGCTGGGATTACAACGAAGTTTGCATTCAGCACAAGTTATTTCAAAGGCTAGTGTGAATTTTTTTGATGACCTCCATGACCGTGCTTCAGAAGTTATGAAAATTCTTGAATCTAGTCAAGTCAAACGATTCCACCAGTTAGTGAACTTTGAGAAGATGTTTAAGGAAGAGGCTGCTAGAGAGGAAAAACAGGCTTTTGATAAAATTGCAGCAGTATTAGAAACTTTGACGTCTAAGAAAATTTCTATGGTATCGGAGGCATCAACCAGCATCAAGCACACAGATACAAAAGAGCATAGCATATTGCAAAAAGAGGTGTTTACCATGCAACAAGTGGCAACAGATGCTAGGAAGGAGTTGAGCGAACATTTGGAAAAGGTGGAGAGTCATTTTATGGAAGACACATTCTCAGCAGCTGAATCTCACACAATCATGGAAAACTGCCTCCAAGAGTGGTATGTTGATTCATTTCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0008574 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

860

Amino Acids

97.56

Weight (kDa)

6.25

Isoelectric Point (pI)

43.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	48 - 198	1.3e-26	Microtubule binding
Kinesin	PF00225	54 - 390	4.8e-116	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37420 AT2G37420
fragaria_vesca	FvH4_6g14420
malus_domestica	MD04G1119500.v1.1 MD12G1136800.v1.1
prunus_persica	Prupe.6G249200_v2.0.a1
pyrus_communis	pycom04g10890 pycom04g10900 pycom12g13130
rosa_chinensis	RchiOBHm_Chr3g0467551
rosa_laevigata	RLG00000024492
rosa_multiflora	Rmu_sc0000286.1_g000001 Rmu_sc0027582.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413600
rosa_rugosa	Rorug03G0087900 Rorug03G0088000 Rorug03G0088100
rosa_samantha	Rh3AG135900 Rh3BG157700 Rh3CG157600 Rh3DG158500
rosa_wichuraiana	Rw3G012910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1589
AatII	GACGTC	2 cut(s)	8, 2339
Acc36I	ACCTGC	1 cut(s)	475
AccB1I	GGYRCC	1 cut(s)	410
AccI	GTMKAC	1 cut(s)	707
AciI	CCGC	3 cut(s)	88, 867, 2018
AclWI	GGATC	2 cut(s)	904, 2020
AcsI	RAATTY	5 cut(s)	109, 720, 2164, 2208, 2346
AcuI	CTGAAG	2 cut(s)	642, 2178
AcvI	CACGTG	3 cut(s)	926, 1271, 1298
AcyI	GRCGYC	3 cut(s)	5, 14, 2336
AfaI	GTAC	2 cut(s)	97, 760
AfiI	CCNNNNNNNGG	2 cut(s)	87, 1764
AflII	CTTAAG	1 cut(s)	1217
AgeI	ACCGGT	1 cut(s)	413
AgsI	TTSAA	6 cut(s)	379, 1502, 1508, 1912, 2151, 2216
AhlI	ACTAGT	1 cut(s)	997
AjnI	CCWGG	1 cut(s)	1311
AjuI	GAANNNNNNNTTGG	2 cut(s)	825, 857
Alw21I	GWGCWC	4 cut(s)	159, 925, 1410, 1455
Alw26I	GTCTC	2 cut(s)	1121, 1877
Alw44I	GTGCAC	1 cut(s)	921
AlwI	GGATC	2 cut(s)	904, 2020
AlwNI	CAGNNNCTG	2 cut(s)	1994, 2522
AoxI	GGCC	5 cut(s)	77, 167, 685, 979, 2028
ApaLI	GTGCAC	1 cut(s)	921
ApoI	RAATTY	5 cut(s)	109, 720, 2164, 2208, 2346
ArsI	GACNNNNNNTTYG	2 cut(s)	284, 316
AsiGI	ACCGGT	1 cut(s)	413
Asp700I	GAANNNNTTC	2 cut(s)	1257, 1398
AspLEI	GCGC	1 cut(s)	786
AspS9I	GGNCC	3 cut(s)	78, 305, 604
AsuC2I	CCSGG	1 cut(s)	1520
AsuHPI	GGTGA	3 cut(s)	857, 964, 1508
AsuII	TTCGAA	1 cut(s)	113
AvaII	GGWCC	2 cut(s)	305, 604
AxyI	CCTNAGG	2 cut(s)	976, 1182
BaeGI	GKGCMC	1 cut(s)	925
BanI	GGYRCC	1 cut(s)	410
BanII	GRGCYC	2 cut(s)	1410, 1455
BauI	CACGAG	2 cut(s)	933, 2105
BbrPI	CACGTG	3 cut(s)	926, 1271, 1298
BbsI	GAAGAC	2 cut(s)	630, 2511
Bbv12I	GWGCWC	4 cut(s)	159, 925, 1410, 1455
BbvCI	CCTCAGC	1 cut(s)	471
BccI	CCATC	8 cut(s)	37, 64, 365, 646, 653, 1161, 1535, 1766
BceAI	ACGGC	1 cut(s)	966
BciT130I	CCWGG	1 cut(s)	1313
BcnI	CCSGG	1 cut(s)	1520
BcoDI	GTCTC	2 cut(s)	1121, 1877
BcuI	ACTAGT	1 cut(s)	997
BfmI	CTRYAG	2 cut(s)	538, 1622
BfrI	CTTAAG	1 cut(s)	1217
BfuAI	ACCTGC	1 cut(s)	475
BglII	AGATCT	1 cut(s)	1744
Bme1390I	CCNGG	2 cut(s)	1313, 1520
Bme18I	GGWCC	2 cut(s)	305, 604
BmgT120I	GGNCC	3 cut(s)	78, 305, 604
BmiI	GGNNCC	1 cut(s)	412
BmrFI	CCNGG	2 cut(s)	1313, 1520
BpiI	GAAGAC	2 cut(s)	630, 2511
BplI	GAGNNNNNCTC	2 cut(s)	593, 625
BpmI	CTGGAG	2 cut(s)	582, 1917
Bpu10I	CCTNAGC	1 cut(s)	471
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	2 cut(s)	595, 1439
BpuMI	CCSGG	1 cut(s)	1520
BsaAI	YACGTR	3 cut(s)	926, 1271, 1298
BsaHI	GRCGYC	3 cut(s)	5, 14, 2336
BsaJI	CCNNGG	2 cut(s)	74, 488
BsaWI	WCCGGW	2 cut(s)	413, 1731
BsaXI	ACNNNNNCTCC	4 cut(s)	176, 206, 1087, 1117
Bsc4I	CCNNNNNNNGG	2 cut(s)	87, 1764
Bse118I	RCCGGY	1 cut(s)	413
Bse1I	ACTGG	1 cut(s)	2242
Bse21I	CCTNAGG	2 cut(s)	976, 1182
Bse3DI	GCAATG	1 cut(s)	1493
BseBI	CCWGG	1 cut(s)	1313
BseDI	CCNNGG	2 cut(s)	74, 488
BseGI	GGATG	6 cut(s)	48, 50, 447, 664, 1129, 2040
BseLI	CCNNNNNNNGG	2 cut(s)	87, 1764
BseMI	GCAATG	1 cut(s)	1493
BseNI	ACTGG	1 cut(s)	2242
BseRI	GAGGAG	3 cut(s)	197, 866, 1820
BseSI	GKGCMC	1 cut(s)	925
BseYI	CCCAGC	1 cut(s)	2110
BsgI	GTGCAG	1 cut(s)	367
BshFI	GGCC	5 cut(s)	79, 169, 687, 981, 2030
BshNI	GGYRCC	1 cut(s)	410
BshTI	ACCGGT	1 cut(s)	413
BsiHKAI	GWGCWC	4 cut(s)	159, 925, 1410, 1455
BsiSI	CCGG	3 cut(s)	414, 1519, 1732
BslFI	GGGAC	2 cut(s)	49, 1043
BslI	CCNNNNNNNGG	2 cut(s)	87, 1764
BsmAI	GTCTC	2 cut(s)	1121, 1877
BsmFI	GGGAC	2 cut(s)	49, 1043
BsmI	GAATGC	2 cut(s)	1006, 2131
BsnI	GGCC	5 cut(s)	79, 169, 687, 981, 2030
Bsp119I	TTCGAA	1 cut(s)	113
Bsp1286I	GDGCHC	4 cut(s)	159, 925, 1410, 1455
Bsp143I	GATC	6 cut(s)	675, 896, 1618, 1666, 1744, 2012
BspACI	CCGC	3 cut(s)	88, 867, 2018
BspANI	GGCC	5 cut(s)	79, 169, 687, 981, 2030
BspLI	GGNNCC	1 cut(s)	412
BspMI	ACCTGC	1 cut(s)	475
BspPI	GGATC	2 cut(s)	904, 2020
BspT104I	TTCGAA	1 cut(s)	113
BspT107I	GGYRCC	1 cut(s)	410
BspTI	CTTAAG	1 cut(s)	1217
BsrDI	GCAATG	1 cut(s)	1493
BsrFI	RCCGGY	1 cut(s)	413
BsrI	ACTGG	1 cut(s)	2242
BssAI	RCCGGY	1 cut(s)	413
BssECI	CCNNGG	2 cut(s)	74, 488
BssMI	GATC	6 cut(s)	675, 896, 1618, 1666, 1744, 2012
BssNAI	GTATAC	1 cut(s)	708
BssNI	GRCGYC	3 cut(s)	5, 14, 2336
BssSI	CACGAG	2 cut(s)	933, 2105
Bst1107I	GTATAC	1 cut(s)	708
Bst2BI	CACGAG	2 cut(s)	933, 2105
Bst2UI	CCWGG	1 cut(s)	1313
Bst6I	CTCTTC	2 cut(s)	777, 2268
BstACI	GRCGYC	3 cut(s)	5, 14, 2336
BstAFI	CTTAAG	1 cut(s)	1217
BstAPI	GCANNNNNTGC	3 cut(s)	154, 530, 2450
BstBAI	YACGTR	3 cut(s)	926, 1271, 1298
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	3 cut(s)	167, 1421, 1920
BstDSI	CCRYGG	1 cut(s)	488
BstF5I	GGATG	6 cut(s)	48, 50, 447, 664, 1129, 2040
BstHHI	GCGC	1 cut(s)	786
BstKTI	GATC	6 cut(s)	678, 899, 1621, 1669, 1747, 2015
BstMAI	GTCTC	2 cut(s)	1121, 1877
BstMBI	GATC	6 cut(s)	675, 896, 1618, 1666, 1744, 2012
BstNI	CCWGG	1 cut(s)	1313
BstNSI	RCATGY	2 cut(s)	200, 1814
BstSCI	CCNGG	2 cut(s)	1311, 1518
BstSFI	CTRYAG	2 cut(s)	538, 1622
BstSLI	GKGCMC	1 cut(s)	925
BstV2I	GAAGAC	2 cut(s)	630, 2511
BstX2I	RGATCY	2 cut(s)	1744, 2012
BstYI	RGATCY	2 cut(s)	1744, 2012
BstZ17I	GTATAC	1 cut(s)	708
Bsu36I	CCTNAGG	2 cut(s)	976, 1182
BsuRI	GGCC	5 cut(s)	79, 169, 687, 981, 2030
BtgI	CCRYGG	1 cut(s)	488
BtgZI	GCGATG	1 cut(s)	1075
BtsCI	GGATG	6 cut(s)	48, 50, 447, 664, 1129, 2040
BtsIMutI	CAGTG	6 cut(s)	15, 240, 384, 1215, 1614, 1995
BveI	ACCTGC	1 cut(s)	475
Cac8I	GCNNGC	3 cut(s)	167, 1421, 1920
CaiI	CAGNNNCTG	2 cut(s)	1994, 2522
CfoI	GCGC	1 cut(s)	786
Cfr10I	RCCGGY	1 cut(s)	413
Cfr13I	GGNCC	3 cut(s)	78, 305, 604
CseI	GACGC	1 cut(s)	22
Csp6I	GTAC	2 cut(s)	96, 759
CspAI	ACCGGT	1 cut(s)	413
CviAII	CATG	8 cut(s)	197, 216, 1655, 1801, 1811, 2183, 2431, 2539
CviQI	GTAC	2 cut(s)	96, 759
DpnI	GATC	6 cut(s)	677, 898, 1620, 1668, 1746, 2014
DpnII	GATC	6 cut(s)	675, 896, 1618, 1666, 1744, 2012
DraI	TTTAAA	1 cut(s)	1740
Eam1104I	CTCTTC	2 cut(s)	777, 2268
EarI	CTCTTC	2 cut(s)	777, 2268
Ecl136II	GAGCTC	2 cut(s)	1408, 1453
Eco147I	AGGCCT	1 cut(s)	687
Eco24I	GRGCYC	2 cut(s)	1410, 1455
Eco47I	GGWCC	2 cut(s)	305, 604
Eco53kI	GAGCTC	2 cut(s)	1408, 1453
Eco57I	CTGAAG	2 cut(s)	642, 2178
Eco72I	CACGTG	3 cut(s)	926, 1271, 1298
Eco81I	CCTNAGG	2 cut(s)	976, 1182
EcoICRI	GAGCTC	2 cut(s)	1408, 1453
EcoRI	GAATTC	1 cut(s)	109
EcoRII	CCWGG	1 cut(s)	1311
EcoT22I	ATGCAT	1 cut(s)	1802
EcoT38I	GRGCYC	2 cut(s)	1410, 1455
FaeI	CATG	8 cut(s)	200, 219, 1658, 1804, 1814, 2186, 2434, 2542
FalI	AAGNNNNNCTT	2 cut(s)	1745, 1777
FaqI	GGGAC	2 cut(s)	49, 1043
FatI	CATG	8 cut(s)	196, 215, 1654, 1800, 1810, 2182, 2430, 2538
FauNDI	CATATG	1 cut(s)	397
FblI	GTMKAC	1 cut(s)	707
FokI	GGATG	6 cut(s)	37, 55, 454, 671, 1136, 2027
FriOI	GRGCYC	2 cut(s)	1410, 1455
GlaI	GCGC	1 cut(s)	785
GsaI	CCCAGC	1 cut(s)	2114
GsuI	CTGGAG	2 cut(s)	582, 1917
HaeIII	GGCC	5 cut(s)	79, 169, 687, 981, 2030
HapII	CCGG	3 cut(s)	414, 1519, 1732
HgaI	GACGC	1 cut(s)	22
HhaI	GCGC	1 cut(s)	786
Hin1I	GRCGYC	3 cut(s)	5, 14, 2336
Hin1II	CATG	8 cut(s)	200, 219, 1658, 1804, 1814, 2186, 2434, 2542
Hin6I	GCGC	1 cut(s)	784
HinP1I	GCGC	1 cut(s)	784
HindIII	AAGCTT	1 cut(s)	1037
HpaII	CCGG	3 cut(s)	414, 1519, 1732
HphI	GGTGA	3 cut(s)	857, 964, 1508
Hpy166II	GTNNAC	5 cut(s)	708, 923, 1816, 2251, 2427
Hpy8I	GTNNAC	5 cut(s)	708, 923, 1816, 2251, 2427
HpyAV	CCTTC	6 cut(s)	199, 428, 1324, 1540, 1906, 2452
HpyCH4IV	ACGT	6 cut(s)	5, 925, 1270, 1297, 1926, 2336
HpySE526I	ACGT	6 cut(s)	5, 925, 1270, 1297, 1926, 2336
Hsp92I	GRCGYC	3 cut(s)	5, 14, 2336
Hsp92II	CATG	8 cut(s)	200, 219, 1658, 1804, 1814, 2186, 2434, 2542
HspAI	GCGC	1 cut(s)	784
Kzo9I	GATC	6 cut(s)	675, 896, 1618, 1666, 1744, 2012
LmnI	GCTCC	8 cut(s)	184, 601, 853, 1003, 1549, 1807, 1915, 1957
MaeII	ACGT	6 cut(s)	5, 925, 1270, 1297, 1926, 2336
MaeIII	GTNAC	6 cut(s)	10, 238, 550, 1484, 1608, 2020
MalI	GATC	6 cut(s)	677, 898, 1620, 1668, 1746, 2014
MboI	GATC	6 cut(s)	675, 896, 1618, 1666, 1744, 2012
MfeI	CAATTG	1 cut(s)	1355
MflI	RGATCY	2 cut(s)	1744, 2012
MhlI	GDGCHC	4 cut(s)	159, 925, 1410, 1455
MlyI	GAGTC	2 cut(s)	1123, 2500
MmeI	TCCRAC	1 cut(s)	714
Mph1103I	ATGCAT	1 cut(s)	1802
MroXI	GAANNNNTTC	2 cut(s)	1257, 1398
MslI	CAYNNNNRTG	3 cut(s)	2187, 2537, 2578
MspA1I	CMGCKG	1 cut(s)	2522
MspCI	CTTAAG	1 cut(s)	1217
MspI	CCGG	3 cut(s)	414, 1519, 1732
MspR9I	CCNGG	2 cut(s)	1313, 1520
MunI	CAATTG	1 cut(s)	1355
Mva1269I	GAATGC	2 cut(s)	1006, 2131
MvaI	CCWGG	1 cut(s)	1313
NciI	CCSGG	1 cut(s)	1520
NdeI	CATATG	1 cut(s)	397
NdeII	GATC	6 cut(s)	675, 896, 1618, 1666, 1744, 2012
NlaIII	CATG	8 cut(s)	200, 219, 1658, 1804, 1814, 2186, 2434, 2542
NlaIV	GGNNCC	1 cut(s)	412
NmeAIII	GCCGAG	1 cut(s)	55
NmuCI	GTSAC	3 cut(s)	10, 238, 550
NsiI	ATGCAT	1 cut(s)	1802
NspI	RCATGY	2 cut(s)	200, 1814
NspV	TTCGAA	1 cut(s)	113
PceI	AGGCCT	1 cut(s)	687
PcsI	WCGNNNNNNNCGW	2 cut(s)	931, 1267
PctI	GAATGC	2 cut(s)	1006, 2131
PdmI	GAANNNNTTC	2 cut(s)	1257, 1398
PfeI	GAWTC	9 cut(s)	20, 115, 1058, 1513, 1859, 2216, 2235, 2525, 2570
PfoI	TCCNGGA	1 cut(s)	1311
PinAI	ACCGGT	1 cut(s)	413
PleI	GAGTC	2 cut(s)	1123, 2499
PmaCI	CACGTG	3 cut(s)	926, 1271, 1298
PmlI	CACGTG	3 cut(s)	926, 1271, 1298
PpsI	GAGTC	2 cut(s)	1123, 2499
Ppu21I	YACGTR	3 cut(s)	926, 1271, 1298
PsiI	TTATAA	1 cut(s)	1589
Psp124BI	GAGCTC	2 cut(s)	1410, 1455
Psp6I	CCWGG	1 cut(s)	1311
PspCI	CACGTG	3 cut(s)	926, 1271, 1298
PspFI	CCCAGC	1 cut(s)	2110
PspGI	CCWGG	1 cut(s)	1311
PspN4I	GGNNCC	1 cut(s)	412
PspPI	GGNCC	3 cut(s)	78, 305, 604
PstNI	CAGNNNCTG	2 cut(s)	1994, 2522
PsuI	RGATCY	2 cut(s)	1744, 2012
PvuII	CAGCTG	1 cut(s)	2522
RsaI	GTAC	2 cut(s)	97, 760
RsaNI	GTAC	2 cut(s)	96, 759
RseI	CAYNNNNRTG	3 cut(s)	2187, 2537, 2578
SacI	GAGCTC	2 cut(s)	1410, 1455
Sau3AI	GATC	6 cut(s)	675, 896, 1618, 1666, 1744, 2012
Sau96I	GGNCC	3 cut(s)	78, 305, 604
SchI	GAGTC	2 cut(s)	1123, 2500
ScrFI	CCNGG	2 cut(s)	1313, 1520
SduI	GDGCHC	4 cut(s)	159, 925, 1410, 1455
SfcI	CTRYAG	2 cut(s)	538, 1622
SfuI	TTCGAA	1 cut(s)	113
SinI	GGWCC	2 cut(s)	305, 604
SmiMI	CAYNNNNRTG	3 cut(s)	2187, 2537, 2578
SmlI	CTYRAG	3 cut(s)	610, 1217, 1454
SmoI	CTYRAG	3 cut(s)	610, 1217, 1454
SpeI	ACTAGT	1 cut(s)	997
SseBI	AGGCCT	1 cut(s)	687
SsiI	CCGC	3 cut(s)	88, 867, 2018
SstI	GAGCTC	2 cut(s)	1410, 1455
StuI	AGGCCT	1 cut(s)	687
StyD4I	CCNGG	2 cut(s)	1311, 1518
TaiI	ACGT	6 cut(s)	8, 928, 1273, 1300, 1929, 2339
TaqI	TCGA	3 cut(s)	113, 519, 690
TaqII	GACCGA	1 cut(s)	293
TauI	GCSGC	2 cut(s)	91, 870
TfiI	GAWTC	9 cut(s)	20, 115, 1058, 1513, 1859, 2216, 2235, 2525, 2570
TscAI	CASTG	6 cut(s)	15, 247, 391, 1215, 1621, 1995
TseFI	GTSAC	3 cut(s)	10, 238, 550
Tsp45I	GTSAC	3 cut(s)	10, 238, 550
TspGWI	ACGGA	2 cut(s)	793, 2039
TspRI	CASTG	6 cut(s)	15, 247, 391, 1215, 1621, 1995
Vha464I	CTTAAG	1 cut(s)	1217
VneI	GTGCAC	1 cut(s)	921
VpaK11BI	GGWCC	2 cut(s)	305, 604
XapI	RAATTY	5 cut(s)	109, 720, 2164, 2208, 2346
XceI	RCATGY	2 cut(s)	200, 1814
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2437
XmiI	GTMKAC	1 cut(s)	707
XmnI	GAANNNNTTC	2 cut(s)	1257, 1398
ZraI	GACGTC	2 cut(s)	6, 2337
Zsp2I	ATGCAT	1 cut(s)	1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.