pycom04g16290

Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0007386
Physical Location & Seq
Forward (+)
18993126 .. 18996060
2935 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2370 bp
ATGGCAGTAGTTGTTAATGAGGGGGATGACGAGGTTACCGATCCTGATTCTGTTCCACCTCAAAAAAAAAAGAGACTTTGGGGTTTGGTAGTATGCCATAGTACAAGTCCAAGATTTGTTCCTTTCCCTCTCAGGTATGCCTGTGAGTTTTTAACTCAAGTGTTTGCCATCCATGTCAATAAGGAAATAGAGTTGGAAGAACAGATGGTTGAGAAGAACATCTTGCGCACTCAAACACTGTTGTGTGATATGCTGTTACGAGATGCACCCTTGGGTATTATGTCACAGAGCCCTAATATTATGGATCTGGTGAAATGTGATGGAGCTGCCCTATTGTACAAGAACAAGGTATGGAGACTTGGAATGACTCCGAGTGACTTCCAGCTTCATGACATAGCTTCTTGGCTCTCCGAGTACCATATGGATTCTACGGGTTTGAGTACAGATAGCTTGTATGATGCAGGATTCCCCGGGGCTCTTGCTCTTGGTGATGTAGTATGTGGAATGGCAGCTGTGTGGTTAACTTCCAAGGACATGCTCTTTTGGTTTCGATCCAACACTGCTGCTGAAATTCGATGGGGTGGTGCAAAACATGAAACCGGTGAGAAAGATGATGGTTGCAAAATGCACCCTAGATCATCATTCAAGGCTTTCCTTGAAGTTGTCAAAAGGAGGAGCTTGCCTTGGAAGGACTATGAAATGGATGCAATTCATTCTTTGCAGCTTATTCTGAGGAATGCATTCAAAGATGCCGGAACCACCTTGGAAGCAAACACCAAAGCAATCAATGTAAGGCTTAGTGACCTAAAACTTGAAGGGATGCAAGAACTGGAAGCTGTGACGAGTGAGATGGTCCGTTTGATTGAAACAGCGACGGTTCCCATTTTGGCTGTTGATGTTCATGGGCTGGTTAATGGGTGGAATACAAAAATTGGCGAGCTAACTGGTCTTCCTGTTGATAAAGCAATCGGTAAGCATTTGCTCTCACTCGTGGAAGATTCTTCGACTGACACGGTGAAAAAGATGTTGAACTCGGCATTGCATGGCAAAGAGGAACAAAACATCCAATTCGAGATAAAAACACATGGTTCTAGGGCTGACCTTGGTCCCATCAGCTTAGTTGTGAATGCTTGTGCAAGCAGAGACATTCGGGAAAATGTTGTGGGGGTGTGTTTTGTGGCACAAGATATCACTGGTCAGAAGAATGTGATGGACAGATTCACCCGGATTGAGGGTGATTACAAAGCAATTGTACAAAACCCTAACCCCTTGATTCCCCCAATATTTGGTACAGATGAATTTGGCTGGTGTTCTGAGTGGAATTCAGCAATGACGAAGTTAACAGGATGGAAACGAGAGGAGGTAATGGATAAAATGCTTCTGGGAGAGGTTTTTGGATCGATCCACATGGCATGTTGTCCTCTCAAAAGCCAGGAATCTTTTGTAAATCTTGGTGTTGTCCTGAACCATGCCATGACAAGTCAGGTGTCCGAAAAGGTTCCCTTTGGTTTCTGTGCTCGCAATGGAAAGTACATAGAATGCCTGCTGTGTGTGACTAAGAAATTGGACAGCGAAGGCTCGGTCACTGGGGTCTTTTGCTTCTTGCAGCTTGCTAGCCCAGAGCTGCAACAAGCACTTCACGTCCAGCGCTTATCAGAACAAACTGCAGTGAAGAGATCGATCCAAGAATTGTCTTATATTAGAAGGCAGATCCGGAATCCTTTAGCCGGAATAATATTTTCTCGGAAAATGATGGAGGATACTGAGTTGGGAGAAGAACAACAACTGCTTCTGCATACGAGCGCCCAGTGCCAGAACCAGCTCAACAAAATACTAGATGACTCGGATCTTGATACCATCATTGACGGCTACTTGAACCTGGAAATGGTTGAGTTCACATTGCATGACGTACTGAATGCCGCTGTCAGTCAAGTCATGATGAAGAGCAATGCCAAGAGCATCCGTGTTGTCCAAGATGCACCGGAAGAGATCATGACTCAGACTTTATATGGGGATAGTCTTAGGCTTCAACAAGTCGTAGCTGATTTCTTAGCCGTATCAATTAGTTTTGTGCCAACTGGAGGCCAGCTTACTATCGAAGCTAATTTGACCGAAGATCAGTTAGGACAGTCTGTTCATCTTGTGCATTTGGAGCTCAGGATCACACACGCCGGTGGTGGGATTCCAGAAGCATTGCTGAACCAGATGTTTGGAAATGACGGAGACATATCTGAGGAGGGCATTAGCCTGCTCGTCAGCAGCAAACTGGTGAAGCTTATGAGCGGAGACGTACGTTATCTTAGGGAAGAAGGCAAGTCAACCTTCATGATATCCGTGGAACTCGCGGCTGCATACAAGATGAAGCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009638 GO:0009639 GO:0009640 GO:0009642 GO:0009791 GO:0009881 GO:0009883 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010018 GO:0010114 GO:0010161 GO:0010201 GO:0010203 GO:0010218 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016301 GO:0016310 GO:0016604 GO:0016740 GO:0016772 GO:0016773 GO:0017148 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031516 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0034248 GO:0034249 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046685 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051606 GO:0051716 GO:0055122 GO:0060089 GO:0060255 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0071491 GO:0071704 GO:0080090 GO:0097159 GO:0104004 GO:0140096 GO:1901363 GO:1901564 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

790

Amino Acids

87.69

Weight (kDa)

5.27

Isoelectric Point (pI)

48.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHY PF00360 76 - 249 8.1e-55 Phytochrome region
PAS PF00989 283 - 397 2.9e-20 PAS fold
PAS_4 PF08448 292 - 401 1.5e-06 PAS fold
PAS PF00989 413 - 536 7.8e-22 PAS fold
HisKA PF00512 562 - 617 6.5e-10 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 671 - 781 1.1e-10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 227
AccB7I CCANNNNNTGG 1 cut(s) 1286
AccBSI CCGCTC 1 cut(s) 2283
AccII CGCG 1 cut(s) 2345
AccIII TCCGGA 1 cut(s) 1713
AciI CCGC 3 cut(s) 1920, 2283, 2345
AclWI GGATC 9 cut(s) 35, 312, 546, 1396, 1405, 1675, 1705, 1854, 2168
AcsI RAATTY 3 cut(s) 570, 1298, 1321
AfaI GTAC 9 cut(s) 103, 338, 416, 442, 1254, 1291, 1532, 1911, 2292
AfeI AGCGCT 1 cut(s) 1649
AfiI CCNNNNNNNGG 6 cut(s) 1231, 1286, 1727, 1885, 2081, 2178
AgeI ACCGGT 1 cut(s) 599
AgsI TTSAA 8 cut(s) 646, 659, 745, 815, 866, 1030, 1876, 2030
AjiI CACGTC 1 cut(s) 1642
AjnI CCWGG 2 cut(s) 1431, 1878
AleI CACNNNNGTG 2 cut(s) 241, 2172
AloI GAACNNNNNNTCC 4 cut(s) 1047, 1079, 2118, 2150
Alw21I GWGCWC 2 cut(s) 1519, 2157
Alw26I GTCTC 5 cut(s) 67, 349, 1137, 2217, 2280
AlwI GGATC 9 cut(s) 35, 312, 546, 1396, 1405, 1675, 1705, 1854, 2168
Ama87I CYCGRG 1 cut(s) 470
Aor13HI TCCGGA 1 cut(s) 1713
Aor51HI AGCGCT 1 cut(s) 1649
AoxI GGCC 1 cut(s) 2083
ApeKI GCWGC 8 cut(s) 326, 509, 563, 721, 1606, 1624, 2259, 2348
ApoI RAATTY 3 cut(s) 570, 1298, 1321
ArsI GACNNNNNNTTYG 2 cut(s) 1566, 1598
AsiGI ACCGGT 1 cut(s) 599
Asp700I GAANNNNTTC 2 cut(s) 740, 1497
AspLEI GCGC 3 cut(s) 228, 1650, 1805
AspS9I GGNCC 2 cut(s) 853, 1106
AsuC2I CCSGG 3 cut(s) 471, 472, 1225
AsuHPI GGTGA 7 cut(s) 322, 500, 614, 1027, 1213, 1247, 2281
AsuNHI GCTAGC 1 cut(s) 1613
AvaI CYCGRG 1 cut(s) 470
AvaII GGWCC 2 cut(s) 853, 1106
BanII GRGCYC 3 cut(s) 293, 478, 2157
BauI CACGAG 1 cut(s) 989
BbsI GAAGAC 1 cut(s) 941
Bbv12I GWGCWC 2 cut(s) 1519, 2157
BbvI GCAGC 8 cut(s) 313, 521, 550, 733, 1611, 1618, 2271, 2335
BceAI ACGGC 2 cut(s) 1882, 2039
BciT130I CCWGG 2 cut(s) 1433, 1880
BciVI GTATCC 1 cut(s) 1753
BcnI CCSGG 3 cut(s) 471, 472, 1225
BcoDI GTCTC 5 cut(s) 67, 349, 1137, 2217, 2280
BfaI CTAG 4 cut(s) 633, 1092, 1614, 1835
BfmI CTRYAG 1 cut(s) 1665
BfoI RGCGCY 2 cut(s) 1651, 1806
BfuI GTATCC 1 cut(s) 1753
Bme1390I CCNGG 5 cut(s) 471, 472, 1225, 1433, 1880
Bme18I GGWCC 2 cut(s) 853, 1106
BmeT110I CYCGRG 1 cut(s) 470
BmgBI CACGTC 1 cut(s) 1642
BmgT120I GGNCC 2 cut(s) 853, 1106
BmiI GGNNCC 4 cut(s) 757, 879, 1108, 1500
BmrFI CCNGG 5 cut(s) 471, 472, 1225, 1433, 1880
BmrI ACTGGG 2 cut(s) 1596, 1801
BmsI GCATC 7 cut(s) 253, 448, 694, 739, 810, 1966, 1968
BmtI GCTAGC 1 cut(s) 1617
BmuI ACTGGG 2 cut(s) 1596, 1801
BoxI GACNNNNGTC 1 cut(s) 1104
BpiI GAAGAC 1 cut(s) 941
BpmI CTGGAG 1 cut(s) 2100
Bpu10I CCTNAGC 1 cut(s) 2156
BpuEI CTTGAG 1 cut(s) 141
BpuMI CCSGG 3 cut(s) 471, 472, 1225
Bsa29I ATCGAT 2 cut(s) 1400, 1679
BsaJI CCNNGG 9 cut(s) 270, 469, 470, 471, 528, 683, 762, 1102, 2334
BsaWI WCCGGW 3 cut(s) 599, 1713, 1981
Bsc4I CCNNNNNNNGG 6 cut(s) 1231, 1286, 1727, 1885, 2081, 2178
Bse118I RCCGGY 2 cut(s) 599, 2171
Bse1I ACTGG 7 cut(s) 834, 949, 1198, 1591, 1807, 2083, 2271
Bse3DI GCAATG 6 cut(s) 1037, 1335, 1528, 1898, 1954, 2192
BseAI TCCGGA 1 cut(s) 1713
BseBI CCWGG 2 cut(s) 1433, 1880
BseCI ATCGAT 2 cut(s) 1400, 1679
BseDI CCNNGG 9 cut(s) 270, 469, 470, 471, 528, 683, 762, 1102, 2334
BseGI GGATG 7 cut(s) 31, 168, 709, 825, 1062, 1352, 1959
BseLI CCNNNNNNNGG 6 cut(s) 1231, 1286, 1727, 1885, 2081, 2178
BseMI GCAATG 6 cut(s) 1037, 1335, 1528, 1898, 1954, 2192
BseMII CTCAG 7 cut(s) 145, 722, 1305, 1755, 2012, 2170, 2223
BseNI ACTGG 7 cut(s) 834, 949, 1198, 1591, 1807, 2083, 2271
BseRI GAGGAG 3 cut(s) 688, 1373, 2249
BseXI GCAGC 8 cut(s) 313, 521, 550, 733, 1611, 1618, 2271, 2335
Bsh1236I CGCG 1 cut(s) 2345
BshFI GGCC 1 cut(s) 2085
BshTI ACCGGT 1 cut(s) 599
BshVI ATCGAT 2 cut(s) 1400, 1679
BsiHKAI GWGCWC 2 cut(s) 1519, 2157
BsiHKCI CYCGRG 1 cut(s) 470
BsiSI CCGG 8 cut(s) 471, 600, 753, 1225, 1714, 1728, 1982, 2172
BsiWI CGTACG 1 cut(s) 2290
BslFI GGGAC 1 cut(s) 1092
BslI CCNNNNNNNGG 6 cut(s) 1231, 1286, 1727, 1885, 2081, 2178
BsmAI GTCTC 5 cut(s) 67, 349, 1137, 2217, 2280
BsmBI CGTCTC 1 cut(s) 2280
BsmFI GGGAC 1 cut(s) 1092
BsmI GAATGC 5 cut(s) 740, 742, 1132, 1544, 1921
BsnI GGCC 1 cut(s) 2085
BsoBI CYCGRG 1 cut(s) 470
Bsp1286I GDGCHC 4 cut(s) 293, 478, 1519, 2157
Bsp13I TCCGGA 1 cut(s) 1713
Bsp1407I TGTACA 2 cut(s) 336, 1252
BspACI CCGC 3 cut(s) 1920, 2283, 2345
BspANI GGCC 1 cut(s) 2085
BspCNI CTCAG 7 cut(s) 144, 723, 1306, 1756, 2011, 2169, 2224
BspDI ATCGAT 2 cut(s) 1400, 1679
BspEI TCCGGA 1 cut(s) 1713
BspFNI CGCG 1 cut(s) 2345
BspHI TCATGA 4 cut(s) 388, 1935, 1992, 2325
BspLI GGNNCC 4 cut(s) 757, 879, 1108, 1500
BspMAI CTGCAG 1 cut(s) 1669
BspOI GCTAGC 1 cut(s) 1617
BspPI GGATC 9 cut(s) 35, 312, 546, 1396, 1405, 1675, 1705, 1854, 2168
BspQI GCTCTTC 1 cut(s) 1937
BsrBI CCGCTC 1 cut(s) 2283
BsrDI GCAATG 6 cut(s) 1037, 1335, 1528, 1898, 1954, 2192
BsrFI RCCGGY 2 cut(s) 599, 2171
BsrGI TGTACA 2 cut(s) 336, 1252
BsrI ACTGG 7 cut(s) 834, 949, 1198, 1591, 1807, 2083, 2271
BssAI RCCGGY 2 cut(s) 599, 2171
BssECI CCNNGG 9 cut(s) 270, 469, 470, 471, 528, 683, 762, 1102, 2334
BssSI CACGAG 1 cut(s) 989
BssT1I CCWWGG 5 cut(s) 270, 528, 683, 762, 1102
Bst2BI CACGAG 1 cut(s) 989
Bst2UI CCWGG 2 cut(s) 1433, 1880
Bst4CI ACNGT 4 cut(s) 240, 877, 1015, 2130
Bst6I CTCTTC 3 cut(s) 1667, 1937, 1980
BstAUI TGTACA 2 cut(s) 336, 1252
BstC8I GCNNGC 9 cut(s) 680, 938, 1138, 1519, 1544, 1611, 1615, 2087, 2249
BstDSI CCRYGG 1 cut(s) 2334
BstEII GGTNACC 1 cut(s) 34
BstF5I GGATG 7 cut(s) 31, 168, 709, 825, 1062, 1352, 1959
BstFNI CGCG 1 cut(s) 2345
BstH2I RGCGCY 2 cut(s) 1651, 1806
BstHHI GCGC 3 cut(s) 228, 1650, 1805
BstMAI GTCTC 5 cut(s) 67, 349, 1137, 2217, 2280
BstMWI GCNNNNNNNGC 2 cut(s) 1809, 2152
BstNI CCWGG 2 cut(s) 1433, 1880
BstNSI RCATGY 2 cut(s) 538, 1416
BstPAI GACNNNNGTC 1 cut(s) 1104
BstPI GGTNACC 1 cut(s) 34
BstSCI CCNGG 5 cut(s) 469, 470, 1223, 1431, 1878
BstSFI CTRYAG 1 cut(s) 1665
BstUI CGCG 1 cut(s) 2345
BstV1I GCAGC 8 cut(s) 313, 521, 550, 733, 1611, 1618, 2271, 2335
BstV2I GAAGAC 1 cut(s) 941
BstX2I RGATCY 3 cut(s) 304, 1710, 1846
BstXI CCANNNNNNTGG 1 cut(s) 2210
BstYI RGATCY 3 cut(s) 304, 1710, 1846
Bsu15I ATCGAT 2 cut(s) 1400, 1679
BsuI GTATCC 1 cut(s) 1753
BsuRI GGCC 1 cut(s) 2085
BsuTUI ATCGAT 2 cut(s) 1400, 1679
BtgI CCRYGG 1 cut(s) 2334
BtrI CACGTC 1 cut(s) 1642
BtsCI GGATG 7 cut(s) 31, 168, 709, 825, 1062, 1352, 1959
BtsI GCAGTG 2 cut(s) 558, 1674
BtsIMutI CAGTG 6 cut(s) 236, 558, 1191, 1584, 1674, 1814
Cac8I GCNNGC 9 cut(s) 680, 938, 1138, 1519, 1544, 1611, 1615, 2087, 2249
CciI TCATGA 4 cut(s) 388, 1935, 1992, 2325
CfoI GCGC 3 cut(s) 228, 1650, 1805
Cfr10I RCCGGY 2 cut(s) 599, 2171
Cfr13I GGNCC 2 cut(s) 853, 1106
Cfr9I CCCGGG 1 cut(s) 470
ClaI ATCGAT 2 cut(s) 1400, 1679
Csp6I GTAC 9 cut(s) 102, 337, 415, 441, 1253, 1290, 1531, 1910, 2291
CspAI ACCGGT 1 cut(s) 599
CviQI GTAC 9 cut(s) 102, 337, 415, 441, 1253, 1290, 1531, 1910, 2291
Eam1104I CTCTTC 3 cut(s) 1667, 1937, 1980
EarI CTCTTC 3 cut(s) 1667, 1937, 1980
Ecl136II GAGCTC 1 cut(s) 2155
Eco130I CCWWGG 5 cut(s) 270, 528, 683, 762, 1102
Eco24I GRGCYC 3 cut(s) 293, 478, 2157
Eco32I GATATC 2 cut(s) 1189, 2331
Eco47I GGWCC 2 cut(s) 853, 1106
Eco47III AGCGCT 1 cut(s) 1649
Eco53kI GAGCTC 1 cut(s) 2155
Eco88I CYCGRG 1 cut(s) 470
Eco91I GGTNACC 1 cut(s) 34
EcoICRI GAGCTC 1 cut(s) 2155
EcoO65I GGTNACC 1 cut(s) 34
EcoRI GAATTC 1 cut(s) 1321
EcoRII CCWGG 2 cut(s) 1431, 1878
EcoRV GATATC 2 cut(s) 1189, 2331
EcoT14I CCWWGG 5 cut(s) 270, 528, 683, 762, 1102
EcoT22I ATGCAT 1 cut(s) 742
EcoT38I GRGCYC 3 cut(s) 293, 478, 2157
ErhI CCWWGG 5 cut(s) 270, 528, 683, 762, 1102
Esp3I CGTCTC 1 cut(s) 2280
FalI AAGNNNNNCTT 6 cut(s) 206, 238, 1487, 1519, 2306, 2338
FaqI GGGAC 1 cut(s) 1092
FauNDI CATATG 1 cut(s) 420
FokI GGATG 7 cut(s) 38, 155, 716, 832, 1049, 1359, 1946
FriOI GRGCYC 3 cut(s) 293, 478, 2157
FspBI CTAG 4 cut(s) 633, 1092, 1614, 1835
FspI TGCGCA 1 cut(s) 227
GlaI GCGC 3 cut(s) 227, 1649, 1804
GsuI CTGGAG 1 cut(s) 2100
HaeII RGCGCY 2 cut(s) 1651, 1806
HaeIII GGCC 1 cut(s) 2085
HapII CCGG 8 cut(s) 471, 600, 753, 1225, 1714, 1728, 1982, 2172
HhaI GCGC 3 cut(s) 228, 1650, 1805
Hin6I GCGC 3 cut(s) 226, 1648, 1803
HinP1I GCGC 3 cut(s) 226, 1648, 1803
HincII GTYRAC 3 cut(s) 522, 1341, 2319
HindII GTYRAC 3 cut(s) 522, 1341, 2319
HindIII AAGCTT 1 cut(s) 2273
HpaI GTTAAC 2 cut(s) 522, 1341
HpaII CCGG 8 cut(s) 471, 600, 753, 1225, 1714, 1728, 1982, 2172
HphI GGTGA 7 cut(s) 322, 500, 614, 1027, 1213, 1247, 2281
Hpy166II GTNNAC 4 cut(s) 522, 1341, 1896, 2319
Hpy8I GTNNAC 4 cut(s) 522, 1341, 1896, 2319
Hpy99I CGWCG 1 cut(s) 877
HpyAV CCTTC 6 cut(s) 682, 809, 1568, 1698, 2303, 2332
HpyCH4III ACNGT 4 cut(s) 240, 877, 1015, 2130
HpyCH4IV ACGT 4 cut(s) 1641, 1908, 2289, 2293
HpyF10VI GCNNNNNNNGC 2 cut(s) 1809, 2152
HpySE526I ACGT 4 cut(s) 1641, 1908, 2289, 2293
HspAI GCGC 3 cut(s) 226, 1648, 1803
Kpn2I TCCGGA 1 cut(s) 1713
KspAI GTTAAC 2 cut(s) 522, 1341
LguI GCTCTTC 1 cut(s) 1937
LmnI GCTCC 3 cut(s) 323, 675, 2152
Lsp1109I GCAGC 8 cut(s) 313, 521, 550, 733, 1611, 1618, 2271, 2335
LweI GCATC 7 cut(s) 253, 448, 694, 739, 810, 1966, 1968
MaeI CTAG 4 cut(s) 633, 1092, 1614, 1835
MaeII ACGT 4 cut(s) 1641, 1908, 2289, 2293
MaeIII GTNAC 8 cut(s) 34, 255, 282, 374, 800, 838, 1552, 1582
MbiI CCGCTC 1 cut(s) 2283
MfeI CAATTG 1 cut(s) 1248
MflI RGATCY 3 cut(s) 304, 1710, 1846
MhlI GDGCHC 4 cut(s) 293, 478, 1519, 2157
MlyI GAGTC 3 cut(s) 361, 1835, 1990
MmeI TCCRAC 2 cut(s) 174, 579
Mph1103I ATGCAT 1 cut(s) 742
MroI TCCGGA 1 cut(s) 1713
MroXI GAANNNNTTC 2 cut(s) 740, 1497
MseI TTAA 5 cut(s) 15, 152, 521, 912, 1340
MslI CAYNNNNRTG 2 cut(s) 241, 2172
MspA1I CMGCKG 2 cut(s) 512, 1922
MspI CCGG 8 cut(s) 471, 600, 753, 1225, 1714, 1728, 1982, 2172
MspR9I CCNGG 5 cut(s) 471, 472, 1225, 1433, 1880
MunI CAATTG 1 cut(s) 1248
Mva1269I GAATGC 5 cut(s) 740, 742, 1132, 1544, 1921
MvaI CCWGG 2 cut(s) 1433, 1880
MvnI CGCG 1 cut(s) 2345
MwoI GCNNNNNNNGC 2 cut(s) 1809, 2152
NciI CCSGG 3 cut(s) 471, 472, 1225
NdeI CATATG 1 cut(s) 420
NheI GCTAGC 1 cut(s) 1613
NlaIV GGNNCC 4 cut(s) 757, 879, 1108, 1500
NmeAIII GCCGAG 1 cut(s) 1013
NmuCI GTSAC 6 cut(s) 282, 374, 800, 838, 1552, 1582
NsbI TGCGCA 1 cut(s) 227
NsiI ATGCAT 1 cut(s) 742
NspI RCATGY 2 cut(s) 538, 1416
OliI CACNNNNGTG 2 cut(s) 241, 2172
PagI TCATGA 4 cut(s) 388, 1935, 1992, 2325
PciSI GCTCTTC 1 cut(s) 1937
PcsI WCGNNNNNNNCGW 1 cut(s) 36
PctI GAATGC 5 cut(s) 740, 742, 1132, 1544, 1921
PdmI GAANNNNTTC 2 cut(s) 740, 1497
PfeI GAWTC 9 cut(s) 47, 425, 465, 998, 1218, 1273, 1436, 1717, 2182
Pfl23II CGTACG 1 cut(s) 2290
PflMI CCANNNNNTGG 1 cut(s) 1286
PinAI ACCGGT 1 cut(s) 599
PleI GAGTC 3 cut(s) 361, 1835, 1990
PpsI GAGTC 3 cut(s) 361, 1835, 1990
PshAI GACNNNNGTC 1 cut(s) 1104
Psp124BI GAGCTC 1 cut(s) 2157
Psp6I CCWGG 2 cut(s) 1431, 1878
PspEI GGTNACC 1 cut(s) 34
PspGI CCWGG 2 cut(s) 1431, 1878
PspLI CGTACG 1 cut(s) 2290
PspN4I GGNNCC 4 cut(s) 757, 879, 1108, 1500
PspPI GGNCC 2 cut(s) 853, 1106
PstI CTGCAG 1 cut(s) 1669
PsuI RGATCY 3 cut(s) 304, 1710, 1846
PvuII CAGCTG 1 cut(s) 512
RsaI GTAC 9 cut(s) 103, 338, 416, 442, 1254, 1291, 1532, 1911, 2292
RsaNI GTAC 9 cut(s) 102, 337, 415, 441, 1253, 1290, 1531, 1910, 2291
RseI CAYNNNNRTG 2 cut(s) 241, 2172
SacI GAGCTC 1 cut(s) 2157
SapI GCTCTTC 1 cut(s) 1937
SaqAI TTAA 5 cut(s) 15, 152, 521, 912, 1340
Sau96I GGNCC 2 cut(s) 853, 1106
SchI GAGTC 3 cut(s) 361, 1835, 1990
ScrFI CCNGG 5 cut(s) 471, 472, 1225, 1433, 1880
SduI GDGCHC 4 cut(s) 293, 478, 1519, 2157
SfaNI GCATC 7 cut(s) 253, 448, 694, 739, 810, 1966, 1968
SfcI CTRYAG 1 cut(s) 1665
SgrAI CRCCGGYG 1 cut(s) 2171
SinI GGWCC 2 cut(s) 853, 1106
SmaI CCCGGG 1 cut(s) 472
SmiMI CAYNNNNRTG 2 cut(s) 241, 2172
SmlI CTYRAG 1 cut(s) 156
SmoI CTYRAG 1 cut(s) 156
SsiI CCGC 3 cut(s) 1920, 2283, 2345
SspI AATATT 3 cut(s) 298, 1284, 1737
SspMI CTAG 4 cut(s) 633, 1092, 1614, 1835
SstI GAGCTC 1 cut(s) 2157
StyD4I CCNGG 5 cut(s) 469, 470, 1223, 1431, 1878
StyI CCWWGG 5 cut(s) 270, 528, 683, 762, 1102
TaaI ACNGT 4 cut(s) 240, 877, 1015, 2130
TaiI ACGT 4 cut(s) 1644, 1911, 2292, 2296
TaqI TCGA 7 cut(s) 550, 574, 1004, 1071, 1400, 1679, 2097
TaqII GACCGA 2 cut(s) 1570, 2126
TatI WGTACW 5 cut(s) 101, 336, 440, 1252, 1530
TauI GCSGC 2 cut(s) 1922, 2348
TfiI GAWTC 9 cut(s) 47, 425, 465, 998, 1218, 1273, 1436, 1717, 2182
Tru1I TTAA 5 cut(s) 15, 152, 521, 912, 1340
Tru9I TTAA 5 cut(s) 15, 152, 521, 912, 1340
TscAI CASTG 6 cut(s) 243, 565, 1198, 1591, 1674, 1814
TseFI GTSAC 6 cut(s) 282, 374, 800, 838, 1552, 1582
TseI GCWGC 8 cut(s) 326, 509, 563, 721, 1606, 1624, 2259, 2348
Tsp45I GTSAC 6 cut(s) 282, 374, 800, 838, 1552, 1582
TspDTI ATGAA 9 cut(s) 377, 609, 701, 711, 890, 1311, 1955, 2126, 2314
TspGWI ACGGA 4 cut(s) 845, 1952, 2235, 2323
TspMI CCCGGG 1 cut(s) 470
TspRI CASTG 6 cut(s) 243, 565, 1198, 1591, 1674, 1814
Van91I CCANNNNNTGG 1 cut(s) 1286
VpaK11BI GGWCC 2 cut(s) 853, 1106
XapI RAATTY 3 cut(s) 570, 1298, 1321
XceI RCATGY 2 cut(s) 538, 1416
XmaI CCCGGG 1 cut(s) 470
XmnI GAANNNNTTC 2 cut(s) 740, 1497
XspI CTAG 4 cut(s) 633, 1092, 1614, 1835
Zsp2I ATGCAT 1 cut(s) 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.