pycom04g18890

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
20737355 .. 20739883
2529 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g18890.3

Sequence Viewer

Length: 1341 bp
ATGATATACACGGCGATAGACACCTTCTACCTGACCGACGAGCAGCTACAGAATTCGCCGTCGAGAAAGGACGGGATAGATGAAGCCACGGAGACCACGCTCAGAATCTACGGCTGTGATTTGATCCAAGAAAGTGGAATTTTGCTCAAATTACCTCAAGCTGTAATGGCGACTGGTCAGGTTCTGTTTCACCGCTTCTTTTGCAAGAAGTCCTTTGCACGCTTCAATGTCAAGAAAGTTGCTGCTAGCTGTGTGTGGCTTGCATCGAAACTGGAGGAGTGCCCGAAGAAAGCCAGACAGGTGATCATTGTTTTCCACAGGATGGAATCTAGGAGGGAGAACCTACCCATTGAGCATTTGGACCCATTTTCAAAGAAATATTCGGACTTGAAGATGGAGTTGAGTAGAACAGAAAGGCATATTTTGAAAGAGATGGGTTTCATCTGTCATGTTGAACATCCTCATAAGTTCATATCAAATTACCTTGCCACTTTGGAAACACCTCCGGAATTAACACAAGAAGCCTGGAATCTAGCAAATGACAGTTTGCGGACGACATTGTGTGTTCGATTCAAGAGCGAGGTTGTTGCTTGTGGTGTGGTTTATGCTGCTGCTCGGAGATTTCAAGTACCACTTCCTGAAAATCCGCCATGGTGGAAGGCATTTGATGCTGAGAAATCAGGGGTTGACGTAGTTTGTAGGGTTCTGGCTCATTTGTACAGCCTTCCTAAAGCAAAGTACATACCGGTCTGTAAAGAGGGTGACTCTTTTACATTTTCCAACAAGTGGTGGATTTCGTCTCAGCCAGTTACAAAGGAAGTTTCGAAGAATGCTGCCGAAGCTACTGATGATGCCTCTAATTCAAAGGATGCAACAGCAGTCAATCCTGAATCTGGTGGATCAAAGGGTGTTTTGGTCAAGCTACCCGTTGACAAGCTGAAGGACTCTAAAGAGAGTGGTGATGAGTCCAAGAGCATGGCTGTTGAGGGAGAGGCAAGAGAAGATGTCAATATGAAATCCAAGTCTGAACGCCGCATGGAATCAAGCGGTGATAAAAGCAAGGACAGAGAAAGGGACAGGGAGAGAGACAGGGACAGGGACAGAAAAAGGGTCCGGGATCGTGATAGGGGCAGGGATTCTGACCGGGAACGAGATCGAGAGGAGGCCGAGAGGGATAGAAACAGGGATCGAAGTCATCGTTCAAGGGATAGAGCAAAAGATTCAGGGGGGCATTCAGATAAATCAAGGCACCACTCGTCACGAGATCGTGATCATCACAGTTCCTCGTATGCTTCCCGGGAGAAGGATCGTGATCGCCATAGACATCATTCGTATGCTTGA

Protein Analysis

447

Amino Acids

51.43

Weight (kDa)

9.01

Isoelectric Point (pI)

48.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1248
AccB7I CCANNNNNTGG 2 cut(s) 322, 786
AccIII TCCGGA 1 cut(s) 505
AciI CCGC 5 cut(s) 193, 550, 647, 1033, 1047
AclWI GGATC 5 cut(s) 118, 907, 1125, 1194, 1314
AcsI RAATTY 2 cut(s) 52, 138
AcuI CTGAAG 1 cut(s) 959
AfaI GTAC 3 cut(s) 630, 719, 740
AfiI CCNNNNNNNGG 4 cut(s) 322, 786, 893, 1303
AgeI ACCGGT 1 cut(s) 745
AgsI TTSAA 9 cut(s) 226, 372, 391, 427, 455, 574, 626, 864, 1203
AjnI CCWGG 1 cut(s) 524
AluBI AGCT 6 cut(s) 46, 161, 249, 842, 922, 937
AluI AGCT 6 cut(s) 46, 161, 249, 842, 922, 937
Alw26I GTCTC 3 cut(s) 86, 804, 1080
AlwI GGATC 5 cut(s) 118, 907, 1125, 1194, 1314
AlwNI CAGNNNCTG 1 cut(s) 184
Ama87I CYCGRG 1 cut(s) 1296
Aor13HI TCCGGA 1 cut(s) 505
AoxI GGCC 1 cut(s) 1164
ApeKI GCWGC 5 cut(s) 43, 242, 608, 611, 833
ApoI RAATTY 2 cut(s) 52, 138
AsiGI ACCGGT 1 cut(s) 745
AspS9I GGNCC 2 cut(s) 361, 1111
AsuC2I CCSGG 4 cut(s) 1115, 1145, 1297, 1298
AsuHPI GGTGA 5 cut(s) 182, 313, 773, 971, 1061
AsuII TTCGAA 1 cut(s) 824
AsuNHI GCTAGC 1 cut(s) 245
AvaI CYCGRG 1 cut(s) 1296
AvaII GGWCC 2 cut(s) 361, 1111
BaeGI GKGCMC 1 cut(s) 284
BanI GGYRCC 1 cut(s) 1248
BauI CACGAG 1 cut(s) 1260
BbvI GCAGC 5 cut(s) 55, 229, 595, 598, 820
BccI CCATC 3 cut(s) 316, 388, 427
BceAI ACGGC 3 cut(s) 27, 43, 127
BcgI CGANNNNNNTGC 2 cut(s) 569, 603
BciT130I CCWGG 1 cut(s) 526
BclI TGATCA 2 cut(s) 303, 1270
BcnI CCSGG 4 cut(s) 1115, 1145, 1297, 1298
BcoDI GTCTC 3 cut(s) 86, 804, 1080
BfaI CTAG 3 cut(s) 246, 330, 533
BfmI CTRYAG 1 cut(s) 47
BisI GCNGC 6 cut(s) 44, 243, 609, 612, 834, 1033
BlsI GCNGC 6 cut(s) 45, 244, 610, 613, 835, 1034
Bme1390I CCNGG 5 cut(s) 526, 1115, 1145, 1297, 1298
Bme18I GGWCC 2 cut(s) 361, 1111
BmeT110I CYCGRG 1 cut(s) 1296
BmgT120I GGNCC 2 cut(s) 361, 1111
BmiI GGNNCC 3 cut(s) 363, 1112, 1250
BmrFI CCNGG 5 cut(s) 526, 1115, 1145, 1297, 1298
BmsI GCATC 4 cut(s) 272, 658, 841, 859
BmtI GCTAGC 1 cut(s) 249
BplI GAGNNNNNCTC 2 cut(s) 749, 781
BpmI CTGGAG 1 cut(s) 293
Bpu14I TTCGAA 1 cut(s) 824
BpuEI CTTGAG 1 cut(s) 141
BpuMI CCSGG 4 cut(s) 1115, 1145, 1297, 1298
BsaBI GATNNNNATC 2 cut(s) 1269, 1311
BsaI GGTCTC 1 cut(s) 86
BsaJI CCNNGG 3 cut(s) 87, 650, 1296
BsaWI WCCGGW 2 cut(s) 505, 745
Bsc4I CCNNNNNNNGG 4 cut(s) 322, 786, 893, 1303
Bse118I RCCGGY 1 cut(s) 745
Bse1I ACTGG 3 cut(s) 178, 276, 806
Bse8I GATNNNNATC 2 cut(s) 1269, 1311
BseAI TCCGGA 1 cut(s) 505
BseBI CCWGG 1 cut(s) 526
BseDI CCNNGG 3 cut(s) 87, 650, 1296
BseGI GGATG 3 cut(s) 327, 457, 874
BseJI GATNNNNATC 2 cut(s) 1269, 1311
BseLI CCNNNNNNNGG 4 cut(s) 322, 786, 893, 1303
BseMII CTCAG 3 cut(s) 115, 663, 815
BseNI ACTGG 3 cut(s) 178, 276, 806
BseRI GAGGAG 2 cut(s) 290, 1175
BseSI GKGCMC 1 cut(s) 284
BseXI GCAGC 5 cut(s) 55, 229, 595, 598, 820
BshFI GGCC 1 cut(s) 1166
BshNI GGYRCC 1 cut(s) 1248
BshTI ACCGGT 1 cut(s) 745
BsiHKCI CYCGRG 1 cut(s) 1296
BsiSI CCGG 5 cut(s) 506, 746, 1114, 1144, 1297
BslFI GGGAC 3 cut(s) 1088, 1106, 1112
BslI CCNNNNNNNGG 4 cut(s) 322, 786, 893, 1303
BsmAI GTCTC 3 cut(s) 86, 804, 1080
BsmBI CGTCTC 1 cut(s) 804
BsmFI GGGAC 3 cut(s) 1088, 1106, 1112
BsmI GAATGC 2 cut(s) 835, 1231
BsnI GGCC 1 cut(s) 1166
Bso31I GGTCTC 1 cut(s) 86
BsoBI CYCGRG 1 cut(s) 1296
Bsp119I TTCGAA 1 cut(s) 824
Bsp1286I GDGCHC 1 cut(s) 284
Bsp13I TCCGGA 1 cut(s) 505
Bsp1407I TGTACA 1 cut(s) 717
Bsp19I CCATGG 1 cut(s) 650
BspACI CCGC 5 cut(s) 193, 550, 647, 1033, 1047
BspANI GGCC 1 cut(s) 1166
BspCNI CTCAG 3 cut(s) 114, 664, 814
BspEI TCCGGA 1 cut(s) 505
BspLI GGNNCC 3 cut(s) 363, 1112, 1250
BspOI GCTAGC 1 cut(s) 249
BspPI GGATC 5 cut(s) 118, 907, 1125, 1194, 1314
BspT104I TTCGAA 1 cut(s) 824
BspT107I GGYRCC 1 cut(s) 1248
BspTNI GGTCTC 1 cut(s) 86
BsrFI RCCGGY 1 cut(s) 745
BsrGI TGTACA 1 cut(s) 717
BsrI ACTGG 3 cut(s) 178, 276, 806
BssAI RCCGGY 1 cut(s) 745
BssECI CCNNGG 3 cut(s) 87, 650, 1296
BssSI CACGAG 1 cut(s) 1260
BssT1I CCWWGG 1 cut(s) 650
Bst2BI CACGAG 1 cut(s) 1260
Bst2UI CCWGG 1 cut(s) 526
Bst4CI ACNGT 2 cut(s) 545, 1280
BstAPI GCANNNNNTGC 1 cut(s) 668
BstAUI TGTACA 1 cut(s) 717
BstBI TTCGAA 1 cut(s) 824
BstC8I GCNNGC 3 cut(s) 220, 247, 261
BstDEI CTNAG 3 cut(s) 101, 672, 801
BstDSI CCRYGG 2 cut(s) 87, 650
BstF5I GGATG 3 cut(s) 327, 457, 874
BstMAI GTCTC 3 cut(s) 86, 804, 1080
BstMWI GCNNNNNNNGC 4 cut(s) 167, 201, 668, 839
BstNI CCWGG 1 cut(s) 526
BstSCI CCNGG 5 cut(s) 524, 1113, 1143, 1295, 1296
BstSFI CTRYAG 1 cut(s) 47
BstSLI GKGCMC 1 cut(s) 284
BstV1I GCAGC 5 cut(s) 55, 229, 595, 598, 820
BstXI CCANNNNNNTGG 2 cut(s) 134, 976
BsuRI GGCC 1 cut(s) 1166
BtgI CCRYGG 2 cut(s) 87, 650
BtsCI GGATG 3 cut(s) 327, 457, 874
Cac8I GCNNGC 3 cut(s) 220, 247, 261
CaiI CAGNNNCTG 1 cut(s) 184
Cfr10I RCCGGY 1 cut(s) 745
Cfr13I GGNCC 2 cut(s) 361, 1111
Cfr9I CCCGGG 1 cut(s) 1296
Csp6I GTAC 3 cut(s) 629, 718, 739
CspAI ACCGGT 1 cut(s) 745
CviAII CATG 4 cut(s) 449, 651, 976, 1036
CviQI GTAC 3 cut(s) 629, 718, 739
DdeI CTNAG 3 cut(s) 101, 672, 801
EciI GGCGGA 1 cut(s) 636
Eco130I CCWWGG 1 cut(s) 650
Eco31I GGTCTC 1 cut(s) 86
Eco47I GGWCC 2 cut(s) 361, 1111
Eco57I CTGAAG 1 cut(s) 959
Eco88I CYCGRG 1 cut(s) 1296
EcoRI GAATTC 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 524
EcoT14I CCWWGG 1 cut(s) 650
ErhI CCWWGG 1 cut(s) 650
Esp3I CGTCTC 1 cut(s) 804
FaeI CATG 4 cut(s) 452, 654, 979, 1039
FalI AAGNNNNNCTT 4 cut(s) 197, 229, 618, 650
FaqI GGGAC 3 cut(s) 1088, 1106, 1112
FatI CATG 4 cut(s) 448, 650, 975, 1035
FbaI TGATCA 2 cut(s) 303, 1270
Fnu4HI GCNGC 6 cut(s) 44, 243, 609, 612, 834, 1033
FokI GGATG 3 cut(s) 334, 444, 881
Fsp4HI GCNGC 6 cut(s) 44, 243, 609, 612, 834, 1033
FspBI CTAG 3 cut(s) 246, 330, 533
GluI GCNGC 6 cut(s) 44, 243, 609, 612, 834, 1033
GsuI CTGGAG 1 cut(s) 293
HaeIII GGCC 1 cut(s) 1166
HapII CCGG 5 cut(s) 506, 746, 1114, 1144, 1297
Hin1II CATG 4 cut(s) 452, 654, 979, 1039
HincII GTYRAC 2 cut(s) 688, 931
HindII GTYRAC 2 cut(s) 688, 931
HpaII CCGG 5 cut(s) 506, 746, 1114, 1144, 1297
HphI GGTGA 5 cut(s) 182, 313, 773, 971, 1061
Hpy166II GTNNAC 2 cut(s) 688, 931
Hpy188I TCNGA 6 cut(s) 104, 385, 618, 1027, 1141, 1237
Hpy8I GTNNAC 2 cut(s) 688, 931
Hpy99I CGWCG 2 cut(s) 41, 64
HpyAV CCTTC 5 cut(s) 34, 652, 734, 934, 1297
HpyCH4III ACNGT 2 cut(s) 545, 1280
HpyCH4IV ACGT 1 cut(s) 690
HpyCH4V TGCA 4 cut(s) 204, 218, 263, 872
HpyF10VI GCNNNNNNNGC 4 cut(s) 167, 201, 668, 839
HpyF3I CTNAG 3 cut(s) 101, 672, 801
HpySE526I ACGT 1 cut(s) 690
Hsp92II CATG 4 cut(s) 452, 654, 979, 1039
Kpn2I TCCGGA 1 cut(s) 505
Ksp22I TGATCA 2 cut(s) 303, 1270
Lsp1109I GCAGC 5 cut(s) 55, 229, 595, 598, 820
LweI GCATC 4 cut(s) 272, 658, 841, 859
MaeI CTAG 3 cut(s) 246, 330, 533
MaeII ACGT 1 cut(s) 690
MaeIII GTNAC 3 cut(s) 761, 808, 1257
MboII GAAGA 4 cut(s) 298, 403, 838, 1013
MhlI GDGCHC 1 cut(s) 284
MluCI AATT 6 cut(s) 52, 138, 149, 478, 509, 859
MlyI GAGTC 3 cut(s) 758, 938, 974
MmeI TCCRAC 1 cut(s) 804
MroI TCCGGA 1 cut(s) 505
MseI TTAA 1 cut(s) 512
MslI CAYNNNNRTG 1 cut(s) 1332
MspI CCGG 5 cut(s) 506, 746, 1114, 1144, 1297
MspR9I CCNGG 5 cut(s) 526, 1115, 1145, 1297, 1298
Mva1269I GAATGC 2 cut(s) 835, 1231
MvaI CCWGG 1 cut(s) 526
MwoI GCNNNNNNNGC 4 cut(s) 167, 201, 668, 839
NciI CCSGG 4 cut(s) 1115, 1145, 1297, 1298
NcoI CCATGG 1 cut(s) 650
NheI GCTAGC 1 cut(s) 245
NlaIII CATG 4 cut(s) 452, 654, 979, 1039
NlaIV GGNNCC 3 cut(s) 363, 1112, 1250
NmeAIII GCCGAG 1 cut(s) 1192
NmuCI GTSAC 2 cut(s) 761, 1257
NspV TTCGAA 1 cut(s) 824
PcsI WCGNNNNNNNCGW 1 cut(s) 1195
PctI GAATGC 2 cut(s) 835, 1231
PfeI GAWTC 8 cut(s) 105, 326, 529, 570, 890, 1040, 1136, 1220
PflMI CCANNNNNTGG 2 cut(s) 322, 786
PfoI TCCNGGA 1 cut(s) 1113
PinAI ACCGGT 1 cut(s) 745
PkrI GCNGC 6 cut(s) 45, 244, 610, 613, 835, 1034
PleI GAGTC 3 cut(s) 758, 938, 973
PpsI GAGTC 3 cut(s) 758, 938, 973
Psp6I CCWGG 1 cut(s) 524
PspGI CCWGG 1 cut(s) 524
PspN4I GGNNCC 3 cut(s) 363, 1112, 1250
PspPI GGNCC 2 cut(s) 361, 1111
PstNI CAGNNNCTG 1 cut(s) 184
RsaI GTAC 3 cut(s) 630, 719, 740
RsaNI GTAC 3 cut(s) 629, 718, 739
RseI CAYNNNNRTG 1 cut(s) 1332
SaqAI TTAA 1 cut(s) 512
SatI GCNGC 6 cut(s) 44, 243, 609, 612, 834, 1033
Sau96I GGNCC 2 cut(s) 361, 1111
SchI GAGTC 3 cut(s) 758, 938, 974
ScrFI CCNGG 5 cut(s) 526, 1115, 1145, 1297, 1298
SduI GDGCHC 1 cut(s) 284
SfaNI GCATC 4 cut(s) 272, 658, 841, 859
SfcI CTRYAG 1 cut(s) 47
SfuI TTCGAA 1 cut(s) 824
SinI GGWCC 2 cut(s) 361, 1111
SmaI CCCGGG 1 cut(s) 1298
SmiMI CAYNNNNRTG 1 cut(s) 1332
SmlI CTYRAG 1 cut(s) 156
SmoI CTYRAG 1 cut(s) 156
Sse9I AATT 6 cut(s) 52, 138, 149, 478, 509, 859
SsiI CCGC 5 cut(s) 193, 550, 647, 1033, 1047
SspI AATATT 1 cut(s) 380
SspMI CTAG 3 cut(s) 246, 330, 533
StyD4I CCNGG 5 cut(s) 524, 1113, 1143, 1295, 1296
StyI CCWWGG 1 cut(s) 650
TaaI ACNGT 2 cut(s) 545, 1280
TaiI ACGT 1 cut(s) 693
TaqI TCGA 6 cut(s) 62, 266, 568, 824, 1156, 1189
TaqII GACCGA 1 cut(s) 50
TasI AATT 6 cut(s) 52, 138, 149, 478, 509, 859
TatI WGTACW 2 cut(s) 717, 738
TauI GCSGC 1 cut(s) 1035
TfiI GAWTC 8 cut(s) 105, 326, 529, 570, 890, 1040, 1136, 1220
Tru1I TTAA 1 cut(s) 512
Tru9I TTAA 1 cut(s) 512
TseFI GTSAC 2 cut(s) 761, 1257
TseI GCWGC 5 cut(s) 43, 242, 608, 611, 833
Tsp45I GTSAC 2 cut(s) 761, 1257
TspDTI ATGAA 4 cut(s) 96, 430, 460, 1028
TspGWI ACGGA 1 cut(s) 104
TspMI CCCGGG 1 cut(s) 1296
Van91I CCANNNNNTGG 2 cut(s) 322, 786
VpaK11BI GGWCC 2 cut(s) 361, 1111
XapI RAATTY 2 cut(s) 52, 138
XcmI CCANNNNNNNNNTGG 1 cut(s) 355
XmaI CCCGGG 1 cut(s) 1296
XspI CTAG 3 cut(s) 246, 330, 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.