pycom04g19770
BZIP Family

Light-inducible protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
21414542 .. 21417909
3368 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g19770.3

Sequence Viewer

Length: 1278 bp
ATGATGGATAAGGTGTTTTCAGTGGAGGAAATGCCCGACCAGCTGTGGTCTTCCACAGGGCCGCCGGCCAATGACGGAGCCGCCGACGGTGACGACTTGTCTAAACTGAACCGGAGTGCATCCGAGTGGGCCTTCCAGCGCTTTCTCCAAGAAGCTTCTCCCTACTCGCCGTCACCCTCCCCGCCGACGCCGCCACCTCCGCATCATTCTTCTTCTTCTTCTTCTTCAGCTCATCATCACGACCAAGACGACGTCAAAGAGATCAAGATGGTCAATTCCCAGCACCCCCACCCCAATCCAACTCAAACTCACTGCAACAACAACACGGCGGCGTTTAACCTGCGGCCGCCTAATGTCGCCGTCGATTCCGAGGAGTACCAGGCGTTCCTGAAGACCAAGCTCGATCTCGCCTGCGCCGCCGTGGCTCTGTCGCGGGTAAAGGGATCGTTGGTGAATGTTCAAGAACCTGTTGCGTCAGCTGACAGCGGATCACACGCTTCCAGTACTTCACTACTCGGATCTCAAGCCCCTTCGAAAGGAGCTGGGTATGATTTACCTTCGTCACCTGCAACGCAACATAGATCTGCGATCCCAGTAAGGCAAGCAACTAGCGGATCCTCGAGAGAAATGACAGATGATGAGGAAGCTGAAGGTGAAACAGCAATGAATGAGAATATGGAACCTGCTGATGTGAAACGCGTGAGAAGAATGCTGTCTAATAGAGAGTCAGCTAGACGCTCAAGAAGAAGAAAGCAGGCACATTTGACTGAGCTTGAGGAACAGGCATCTCAATTAAGAGTCAAGAACTCCTCTTTGATGAAGCGCCTGACTGATGCGGACAAGAAGTACAACGAAGCAGCTGTTGACAATAGAGTACTAAAAGCTGATATCGAAACATTGAGAGCAAAGGTAAAGATGGCTGAGGAGACAGTGAAAAGATTAACTGGGTCGAACCCCATGTTCCATGCCATGTTAGAGATGTCATCAATCGGCATGGCACCATTTGATGGAAGCCCTTCAGAGGCATCAACAGATGCTGCTGTTCCGGTGCAAGATGACCCAAATCAATACTTTTTTCAACCTGCTTCTGATAACCCTATACCAACTCATGACCCGAGAGTCAAGAATGATTCTACAGACGTTCCTTCTGTTGAAAATGTGCAGAAGAATTCTGCAGCAACATCACCAGCAGATGTGTCGGAGAACAAGATGGGACGAACACCTTCCCTACAGCGAGTTGCTAGCTTAGAGCATCTGCAAAAGCGGATAAGGGGCTGA

Protein Analysis

426

Amino Acids

46.31

Weight (kDa)

5.89

Isoelectric Point (pI)

65.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010782)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 574
AasI GACNNNNNNGTC 1 cut(s) 1118
AatII GACGTC 1 cut(s) 255
Acc36I ACCTGC 4 cut(s) 348, 574, 691, 1090
AccB1I GGYRCC 1 cut(s) 997
AccB7I CCANNNNNTGG 1 cut(s) 1007
AccII CGCG 2 cut(s) 433, 699
AclWI GGATC 6 cut(s) 451, 496, 526, 583, 609, 622
AcoI YGGCCR 2 cut(s) 66, 344
AcsI RAATTY 1 cut(s) 1168
AcuI CTGAAG 4 cut(s) 210, 410, 669, 1002
AcyI GRCGYC 2 cut(s) 188, 252
AfaI GTAC 4 cut(s) 377, 505, 848, 876
AfeI AGCGCT 1 cut(s) 140
AfiI CCNNNNNNNGG 3 cut(s) 536, 1007, 1021
AflIII ACRYGT 1 cut(s) 697
AgsI TTSAA 3 cut(s) 461, 1079, 1154
AhdI GACNNNNNGTC 1 cut(s) 97
AjnI CCWGG 1 cut(s) 378
Alw26I GTCTC 1 cut(s) 920
AlwI GGATC 6 cut(s) 451, 496, 526, 583, 609, 622
AlwNI CAGNNNCTG 1 cut(s) 1037
Ama87I CYCGRG 2 cut(s) 619, 1114
Aor51HI AGCGCT 1 cut(s) 140
AoxI GGCC 4 cut(s) 59, 66, 129, 344
ApeKI GCWGC 3 cut(s) 857, 1037, 1175
ApoI RAATTY 1 cut(s) 1168
Asp700I GAANNNNTTC 2 cut(s) 1015, 1222
AspLEI GCGC 3 cut(s) 141, 416, 825
AspS9I GGNCC 2 cut(s) 59, 129
AsuHPI GGTGA 6 cut(s) 101, 165, 463, 555, 665, 1176
AsuII TTCGAA 1 cut(s) 533
AsuNHI GCTAGC 1 cut(s) 1241
AvaI CYCGRG 2 cut(s) 619, 1114
BamHI GGATCC 1 cut(s) 614
BanI GGYRCC 1 cut(s) 997
BbsI GAAGAC 2 cut(s) 42, 398
BbvCI CCTCAGC 1 cut(s) 921
BbvI GCAGC 3 cut(s) 869, 1024, 1187
BccI CCATC 4 cut(s) 262, 910, 1001, 1204
BceAI ACGGC 4 cut(s) 154, 342, 344, 404
BcgI CGANNNNNNTGC 2 cut(s) 1179, 1213
BciT130I CCWGG 1 cut(s) 380
BcoDI GTCTC 1 cut(s) 920
BfaI CTAG 3 cut(s) 609, 732, 1242
BfmI CTRYAG 3 cut(s) 1134, 1173, 1229
BfoI RGCGCY 2 cut(s) 142, 826
BfuAI ACCTGC 4 cut(s) 348, 574, 691, 1090
BglI GCCNNNNNGGC 1 cut(s) 422
BglII AGATCT 1 cut(s) 581
BmcAI AGTACT 2 cut(s) 505, 876
Bme1390I CCNGG 1 cut(s) 380
BmeRI GACNNNNNGTC 1 cut(s) 97
BmeT110I CYCGRG 2 cut(s) 619, 1114
BmgT120I GGNCC 2 cut(s) 59, 129
BmiI GGNNCC 4 cut(s) 79, 616, 681, 999
BmrFI CCNGG 1 cut(s) 380
BmrI ACTGGG 2 cut(s) 587, 954
BmsI GCATC 7 cut(s) 128, 211, 794, 823, 1024, 1034, 1261
BmtI GCTAGC 1 cut(s) 1245
BmuI ACTGGG 2 cut(s) 587, 954
BpiI GAAGAC 2 cut(s) 42, 398
Bpu10I CCTNAGC 1 cut(s) 921
Bpu14I TTCGAA 1 cut(s) 533
BpuEI CTTGAG 3 cut(s) 507, 724, 794
BsaHI GRCGYC 2 cut(s) 188, 252
BsaJI CCNNGG 2 cut(s) 369, 420
BsaWI WCCGGW 2 cut(s) 111, 1045
Bsc4I CCNNNNNNNGG 3 cut(s) 536, 1007, 1021
Bse118I RCCGGY 1 cut(s) 64
Bse1I ACTGG 3 cut(s) 501, 593, 949
Bse3DI GCAATG 1 cut(s) 669
BseBI CCWGG 1 cut(s) 380
BseDI CCNNGG 2 cut(s) 369, 420
BseGI GGATG 1 cut(s) 119
BseLI CCNNNNNNNGG 3 cut(s) 536, 1007, 1021
BseMI GCAATG 1 cut(s) 669
BseMII CTCAG 2 cut(s) 759, 912
BseNI ACTGG 3 cut(s) 501, 593, 949
BseRI GAGGAG 3 cut(s) 386, 799, 938
BseX3I CGGCCG 1 cut(s) 344
BseXI GCAGC 3 cut(s) 869, 1024, 1187
BseYI CCCAGC 2 cut(s) 279, 542
BsgI GTGCAG 1 cut(s) 1181
Bsh1236I CGCG 2 cut(s) 433, 699
Bsh1285I CGRYCG 1 cut(s) 347
BshFI GGCC 4 cut(s) 61, 68, 131, 346
BshNI GGYRCC 1 cut(s) 997
BsiEI CGRYCG 1 cut(s) 347
BsiHKCI CYCGRG 2 cut(s) 619, 1114
BsiSI CCGG 3 cut(s) 65, 112, 1046
BslFI GGGAC 1 cut(s) 1227
BslI CCNNNNNNNGG 3 cut(s) 536, 1007, 1021
BsmAI GTCTC 1 cut(s) 920
BsmFI GGGAC 1 cut(s) 1227
BsmI GAATGC 1 cut(s) 714
BsnI GGCC 4 cut(s) 61, 68, 131, 346
BsoBI CYCGRG 2 cut(s) 619, 1114
Bsp119I TTCGAA 1 cut(s) 533
Bsp143I GATC 8 cut(s) 261, 403, 443, 488, 518, 581, 588, 614
BspANI GGCC 4 cut(s) 61, 68, 131, 346
BspCNI CTCAG 2 cut(s) 760, 913
BspFNI CGCG 2 cut(s) 433, 699
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 4 cut(s) 79, 616, 681, 999
BspMAI CTGCAG 1 cut(s) 1177
BspMI ACCTGC 4 cut(s) 348, 574, 691, 1090
BspOI GCTAGC 1 cut(s) 1245
BspPI GGATC 6 cut(s) 451, 496, 526, 583, 609, 622
BspT104I TTCGAA 1 cut(s) 533
BspT107I GGYRCC 1 cut(s) 997
BsrDI GCAATG 1 cut(s) 669
BsrFI RCCGGY 1 cut(s) 64
BsrI ACTGG 3 cut(s) 501, 593, 949
BssAI RCCGGY 1 cut(s) 64
BssECI CCNNGG 2 cut(s) 369, 420
BssMI GATC 8 cut(s) 261, 403, 443, 488, 518, 581, 588, 614
BssNI GRCGYC 2 cut(s) 188, 252
Bst2UI CCWGG 1 cut(s) 380
Bst4CI ACNGT 2 cut(s) 89, 931
BstACI GRCGYC 2 cut(s) 188, 252
BstBI TTCGAA 1 cut(s) 533
BstC8I GCNNGC 5 cut(s) 66, 412, 603, 756, 1243
BstDEI CTNAG 3 cut(s) 768, 921, 1246
BstDSI CCRYGG 1 cut(s) 420
BstENI CCTNNNNNAGG 1 cut(s) 534
BstF5I GGATG 1 cut(s) 119
BstFNI CGCG 2 cut(s) 433, 699
BstH2I RGCGCY 2 cut(s) 142, 826
BstHHI GCGC 3 cut(s) 141, 416, 825
BstKTI GATC 8 cut(s) 264, 406, 446, 491, 521, 584, 591, 617
BstMAI GTCTC 1 cut(s) 920
BstMBI GATC 8 cut(s) 261, 403, 443, 488, 518, 581, 588, 614
BstMCI CGRYCG 1 cut(s) 347
BstMWI GCNNNNNNNGC 5 cut(s) 40, 190, 199, 416, 422
BstNI CCWGG 1 cut(s) 380
BstSCI CCNGG 1 cut(s) 378
BstSFI CTRYAG 3 cut(s) 1134, 1173, 1229
BstUI CGCG 2 cut(s) 433, 699
BstV1I GCAGC 3 cut(s) 869, 1024, 1187
BstV2I GAAGAC 2 cut(s) 42, 398
BstX2I RGATCY 3 cut(s) 518, 581, 614
BstYI RGATCY 3 cut(s) 518, 581, 614
BstZI CGGCCG 1 cut(s) 344
BsuRI GGCC 4 cut(s) 61, 68, 131, 346
BtgI CCRYGG 1 cut(s) 420
BtsCI GGATG 1 cut(s) 119
BtsI GCAGTG 1 cut(s) 310
BtsIMutI CAGTG 3 cut(s) 27, 310, 936
BveI ACCTGC 4 cut(s) 348, 574, 691, 1090
Cac8I GCNNGC 5 cut(s) 66, 412, 603, 756, 1243
CaiI CAGNNNCTG 1 cut(s) 1037
CciI TCATGA 1 cut(s) 1108
CciNI GCGGCCGC 1 cut(s) 344
CfoI GCGC 3 cut(s) 141, 416, 825
Cfr10I RCCGGY 1 cut(s) 64
Cfr13I GGNCC 2 cut(s) 59, 129
CseI GACGC 3 cut(s) 196, 462, 744
Csp6I GTAC 4 cut(s) 376, 504, 847, 875
CviAII CATG 5 cut(s) 958, 965, 970, 994, 1109
CviQI GTAC 4 cut(s) 376, 504, 847, 875
DdeI CTNAG 3 cut(s) 768, 921, 1246
DpnI GATC 8 cut(s) 263, 405, 445, 490, 520, 583, 590, 616
DpnII GATC 8 cut(s) 261, 403, 443, 488, 518, 581, 588, 614
DrdI GACNNNNNNGTC 1 cut(s) 1118
DriI GACNNNNNGTC 1 cut(s) 97
DseDI GACNNNNNNGTC 1 cut(s) 1118
EaeI YGGCCR 2 cut(s) 66, 344
EagI CGGCCG 1 cut(s) 344
Eam1105I GACNNNNNGTC 1 cut(s) 97
EclXI CGGCCG 1 cut(s) 344
Eco32I GATATC 1 cut(s) 889
Eco47III AGCGCT 1 cut(s) 140
Eco52I CGGCCG 1 cut(s) 344
Eco57I CTGAAG 4 cut(s) 210, 410, 669, 1002
Eco88I CYCGRG 2 cut(s) 619, 1114
EcoNI CCTNNNNNAGG 1 cut(s) 534
EcoRI GAATTC 1 cut(s) 1168
EcoRII CCWGG 1 cut(s) 378
EcoRV GATATC 1 cut(s) 889
FaeI CATG 5 cut(s) 961, 968, 973, 997, 1112
FaiI YATR 9 cut(s) 549, 579, 677, 959, 966, 971, 995, 1100, 1110
FaqI GGGAC 1 cut(s) 1227
FatI CATG 5 cut(s) 957, 964, 969, 993, 1108
FauI CCCGC 2 cut(s) 189, 426
FokI GGATG 1 cut(s) 106
FspBI CTAG 3 cut(s) 609, 732, 1242
GlaI GCGC 3 cut(s) 140, 415, 824
GsaI CCCAGC 2 cut(s) 283, 546
HaeII RGCGCY 2 cut(s) 142, 826
HaeIII GGCC 4 cut(s) 61, 68, 131, 346
HapII CCGG 3 cut(s) 65, 112, 1046
HgaI GACGC 3 cut(s) 196, 462, 744
HhaI GCGC 3 cut(s) 141, 416, 825
Hin1I GRCGYC 2 cut(s) 188, 252
Hin1II CATG 5 cut(s) 961, 968, 973, 997, 1112
Hin6I GCGC 3 cut(s) 139, 414, 823
HinP1I GCGC 3 cut(s) 139, 414, 823
HincII GTYRAC 1 cut(s) 865
HindII GTYRAC 1 cut(s) 865
HindIII AAGCTT 1 cut(s) 153
HinfI GANTC 5 cut(s) 365, 725, 798, 1119, 1130
HpaII CCGG 3 cut(s) 65, 112, 1046
HphI GGTGA 6 cut(s) 101, 165, 463, 555, 665, 1176
Hpy166II GTNNAC 1 cut(s) 865
Hpy188I TCNGA 6 cut(s) 124, 370, 518, 1021, 1090, 1201
Hpy188III TCNNGA 9 cut(s) 239, 265, 388, 461, 621, 741, 802, 1109, 1123
Hpy8I GTNNAC 1 cut(s) 865
Hpy99I CGWCG 4 cut(s) 89, 190, 254, 365
HpyAV CCTTC 7 cut(s) 142, 540, 567, 644, 1026, 1155, 1233
HpyCH4III ACNGT 2 cut(s) 89, 931
HpyCH4IV ACGT 2 cut(s) 252, 1140
HpyCH4V TGCA 7 cut(s) 119, 315, 569, 1051, 1162, 1175, 1258
HpyF10VI GCNNNNNNNGC 5 cut(s) 40, 190, 199, 416, 422
HpyF3I CTNAG 3 cut(s) 768, 921, 1246
HpySE526I ACGT 2 cut(s) 252, 1140
Hsp92I GRCGYC 2 cut(s) 188, 252
Hsp92II CATG 5 cut(s) 961, 968, 973, 997, 1112
HspAI GCGC 3 cut(s) 139, 414, 823
KroI GCCGGC 1 cut(s) 64
KroNI GCCGGC 1 cut(s) 66
Kzo9I GATC 8 cut(s) 261, 403, 443, 488, 518, 581, 588, 614
LmnI GCTCC 2 cut(s) 77, 539
Lsp1109I GCAGC 3 cut(s) 869, 1024, 1187
LweI GCATC 7 cut(s) 128, 211, 794, 823, 1024, 1034, 1261
MaeI CTAG 3 cut(s) 609, 732, 1242
MaeII ACGT 2 cut(s) 252, 1140
MaeIII GTNAC 3 cut(s) 89, 171, 561
MalI GATC 8 cut(s) 263, 405, 445, 490, 520, 583, 590, 616
MboI GATC 8 cut(s) 261, 403, 443, 488, 518, 581, 588, 614
MflI RGATCY 3 cut(s) 518, 581, 614
MluCI AATT 3 cut(s) 274, 791, 1168
MluI ACGCGT 1 cut(s) 697
MlyI GAGTC 3 cut(s) 734, 807, 1128
MmeI TCCRAC 2 cut(s) 323, 1179
MroNI GCCGGC 1 cut(s) 64
MroXI GAANNNNTTC 2 cut(s) 1015, 1222
MseI TTAA 3 cut(s) 336, 794, 941
MslI CAYNNNNRTG 1 cut(s) 124
MspA1I CMGCKG 4 cut(s) 43, 479, 486, 860
MspI CCGG 3 cut(s) 65, 112, 1046
MspR9I CCNGG 1 cut(s) 380
Mva1269I GAATGC 1 cut(s) 714
MvaI CCWGG 1 cut(s) 380
MvnI CGCG 2 cut(s) 433, 699
MwoI GCNNNNNNNGC 5 cut(s) 40, 190, 199, 416, 422
NaeI GCCGGC 1 cut(s) 66
NdeII GATC 8 cut(s) 261, 403, 443, 488, 518, 581, 588, 614
NgoMIV GCCGGC 1 cut(s) 64
NheI GCTAGC 1 cut(s) 1241
NlaIII CATG 5 cut(s) 961, 968, 973, 997, 1112
NlaIV GGNNCC 4 cut(s) 79, 616, 681, 999
NmuCI GTSAC 3 cut(s) 89, 171, 561
NotI GCGGCCGC 1 cut(s) 344
NspV TTCGAA 1 cut(s) 533
PaeR7I CTCGAG 1 cut(s) 619
PagI TCATGA 1 cut(s) 1108
PaqCI CACCTGC 1 cut(s) 574
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 246
PctI GAATGC 1 cut(s) 714
PdiI GCCGGC 1 cut(s) 66
PdmI GAANNNNTTC 2 cut(s) 1015, 1222
PfeI GAWTC 2 cut(s) 365, 1130
PflFI GACNNNGTC 1 cut(s) 251
PflMI CCANNNNNTGG 1 cut(s) 1007
PleI GAGTC 3 cut(s) 733, 806, 1127
PpsI GAGTC 3 cut(s) 733, 806, 1127
Psp6I CCWGG 1 cut(s) 378
PspFI CCCAGC 2 cut(s) 279, 542
PspGI CCWGG 1 cut(s) 378
PspN4I GGNNCC 4 cut(s) 79, 616, 681, 999
PspPI GGNCC 2 cut(s) 59, 129
PsrI GAACNNNNNNTAC 2 cut(s) 368, 400
PstI CTGCAG 1 cut(s) 1177
PstNI CAGNNNCTG 1 cut(s) 1037
PsuI RGATCY 3 cut(s) 518, 581, 614
PsyI GACNNNGTC 1 cut(s) 251
PvuII CAGCTG 3 cut(s) 43, 479, 860
RsaI GTAC 4 cut(s) 377, 505, 848, 876
RsaNI GTAC 4 cut(s) 376, 504, 847, 875
RseI CAYNNNNRTG 1 cut(s) 124
SaqAI TTAA 3 cut(s) 336, 794, 941
Sau3AI GATC 8 cut(s) 261, 403, 443, 488, 518, 581, 588, 614
Sau96I GGNCC 2 cut(s) 59, 129
ScaI AGTACT 2 cut(s) 505, 876
SchI GAGTC 3 cut(s) 734, 807, 1128
ScrFI CCNGG 1 cut(s) 380
SfaNI GCATC 7 cut(s) 128, 211, 794, 823, 1024, 1034, 1261
SfcI CTRYAG 3 cut(s) 1134, 1173, 1229
Sfr274I CTCGAG 1 cut(s) 619
SfuI TTCGAA 1 cut(s) 533
SlaI CTCGAG 1 cut(s) 619
SmiMI CAYNNNNRTG 1 cut(s) 124
SmlI CTYRAG 4 cut(s) 522, 619, 739, 773
SmoI CTYRAG 4 cut(s) 522, 619, 739, 773
Sse9I AATT 3 cut(s) 274, 791, 1168
SspMI CTAG 3 cut(s) 609, 732, 1242
StyD4I CCNGG 1 cut(s) 378
TaaI ACNGT 2 cut(s) 89, 931
TaiI ACGT 2 cut(s) 255, 1143
TaqI TCGA 6 cut(s) 363, 402, 533, 620, 891, 950
TasI AATT 3 cut(s) 274, 791, 1168
TatI WGTACW 3 cut(s) 503, 846, 874
TauI GCSGC 7 cut(s) 64, 83, 193, 332, 346, 349, 419
TfiI GAWTC 2 cut(s) 365, 1130
Tru1I TTAA 3 cut(s) 336, 794, 941
Tru9I TTAA 3 cut(s) 336, 794, 941
TscAI CASTG 3 cut(s) 27, 317, 936
TseFI GTSAC 3 cut(s) 89, 171, 561
TseI GCWGC 3 cut(s) 857, 1037, 1175
Tsp45I GTSAC 3 cut(s) 89, 171, 561
TspDTI ATGAA 2 cut(s) 680, 833
TspGWI ACGGA 1 cut(s) 90
TspRI CASTG 3 cut(s) 27, 317, 936
Tth111I GACNNNGTC 1 cut(s) 251
Van91I CCANNNNNTGG 1 cut(s) 1007
XagI CCTNNNNNAGG 1 cut(s) 534
XapI RAATTY 1 cut(s) 1168
XhoI CTCGAG 1 cut(s) 619
XmnI GAANNNNTTC 2 cut(s) 1015, 1222
XspI CTAG 3 cut(s) 609, 732, 1242
ZraI GACGTC 1 cut(s) 253
ZrmI AGTACT 2 cut(s) 505, 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.