pycom12g22080
BZIP Family

Light-inducible protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
23105984 .. 23109042
3059 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g22080.2

Sequence Viewer

Length: 1308 bp
ATGGATAGGGTGTTTTCAGTGGAGGAAATGTCCGACCAGCTGTGGTCTTCCACAGCGCCGCCGGACAATGGCGGAGCCGACGACGACAACTTGTCTAAATTGAACCGAAGCGCATCGGAGTGGGCCTTCCAGCGTTTTCTCCAAGAAGCTTCTCCCTACTCCCCCTCACCCTCGCCGACGCCGCCGCCACCTCCGCATCCTTCTTCTTCTTCTACAGCTCACCATCACGACCAAAACGACGTTGAAGAGATTAAGATGATCAATGCCCACCACCACAACCCCACTCACACTCACTACAACAACATGCGGCCGCCTAATGTCACCGTCGATTCCGATGAGTACCGGGCGTTCCTGAAGACCAAGCTCGACCTCGCCTGTGCCGCCGTGGCTTTGTCGCGGGAGGGATCGTTGGTGACAGTACAAGAATCTGCGGCTTTAGCTAACAGCGGATCACACGCTTCAAGTACTTCACAACTCGGATCTGAAGCCCCTTCGAAAGGAGCTGGGTATGATTTATCCAGGTCAAATGATAAGAATGCTCATGCACCACTTGGTGCCGTTCCTTCGTTACCTGCAACGAAATGTAGATCCGCTATCCCAGTAAGGCAAGCAACTAGCGGATCATCGAGAGAAATGACAGACGATGAGGAAGCTGAAGGTGAAACTGCAATGAATGAGAACATGGACCCTGCTGATGTCAAACGCGTGAGGAGAATGCTGTCTAATAGAGAGTCAGCTAGACGCTCGAGAAGAAGAAAGCAGGCACATTTGACTGATCTTGAGGGACAGGTATCTCAATTAAGAGTCGAGAACTCCTCTCTGTTGAAGCGTCTGACTGATTCGGAGAAGAAGTACAATGAAGCGGCTGTTGACAATAGAGTTTTAAAAGCTGATATCGAAGCATTGAGAGCAAAGGTAAAGATGGCTGAGGAGATGGTGAAAAGATTTACTGGGTTGAACCCCATGTTCCATGCTATGTCAGAGGTGTCATCAATCGGCATGCCACCATTTGATGGAAGCCCTTCAGAGGCATCAATAGACGCTGCTGTTCCGGAGCAAGATGACCCAAATCATCACTTCTTTCAACCTGCTTCTAATAACCCTATACCAACTCATGACCCGAGAGTCAAGAATGATTCTGCAGACGTTCCTTCTGTTGAAAACGTGCAGAAGAAGTCTGCAGCAACATCATCAGCAGATGTGTCGGGGAACAAGATGGGACGAACACCTTCCCTTCAGCGAGTTGCTAGCTTAGAGCATCTGCAAAAGCGGATAAGGGGCGGAAACCCCTCCAATTGGGAGCAATAG

Protein Analysis

436

Amino Acids

47.52

Weight (kDa)

6.03

Isoelectric Point (pI)

63.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010782)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1124
Acc36I ACCTGC 2 cut(s) 580, 1096
AccB1I GGYRCC 1 cut(s) 554
AccB7I CCANNNNNTGG 1 cut(s) 1013
AccII CGCG 2 cut(s) 397, 705
AccIII TCCGGA 1 cut(s) 1051
AclWI GGATC 5 cut(s) 412, 457, 487, 582, 628
AcoI YGGCCR 1 cut(s) 308
AcuI CTGAAG 5 cut(s) 374, 504, 675, 1008, 1220
AcyI GRCGYC 1 cut(s) 179
AdeI CACNNNGTG 1 cut(s) 554
AfaI GTAC 4 cut(s) 341, 420, 466, 854
AfiI CCNNNNNNNGG 5 cut(s) 68, 497, 1013, 1027, 1296
AflIII ACRYGT 1 cut(s) 703
AgsI TTSAA 7 cut(s) 103, 245, 462, 826, 958, 1085, 1160
AhdI GACNNNNNGTC 1 cut(s) 91
AjnI CCWGG 1 cut(s) 518
AlwI GGATC 5 cut(s) 412, 457, 487, 582, 628
Ama87I CYCGRG 2 cut(s) 745, 1120
Aor13HI TCCGGA 1 cut(s) 1051
AoxI GGCC 2 cut(s) 123, 308
ApeKI GCWGC 2 cut(s) 1043, 1181
Asp700I GAANNNNTTC 2 cut(s) 1021, 1228
AspLEI GCGC 2 cut(s) 58, 113
AspS9I GGNCC 2 cut(s) 123, 685
AsuC2I CCSGG 1 cut(s) 344
AsuHPI GGTGA 6 cut(s) 159, 212, 313, 424, 671, 949
AsuII TTCGAA 1 cut(s) 494
AsuNHI GCTAGC 1 cut(s) 1247
AvaI CYCGRG 2 cut(s) 745, 1120
AvaII GGWCC 1 cut(s) 685
BanI GGYRCC 1 cut(s) 554
BbsI GAAGAC 2 cut(s) 39, 362
BbvCI CCTCAGC 1 cut(s) 927
BbvI GCAGC 2 cut(s) 1030, 1193
BccI CCATC 5 cut(s) 231, 916, 928, 1007, 1210
BceAI ACGGC 2 cut(s) 368, 542
BcgI CGANNNNNNTGC 2 cut(s) 1185, 1219
BciT130I CCWGG 1 cut(s) 520
BclI TGATCA 1 cut(s) 258
BcnI CCSGG 1 cut(s) 344
BfaI CTAG 3 cut(s) 615, 738, 1248
BfmI CTRYAG 3 cut(s) 213, 1140, 1179
BfoI RGCGCY 1 cut(s) 59
BfuAI ACCTGC 2 cut(s) 580, 1096
BglI GCCNNNNNGGC 1 cut(s) 386
BmcAI AGTACT 1 cut(s) 466
Bme1390I CCNGG 2 cut(s) 344, 520
Bme18I GGWCC 1 cut(s) 685
BmeRI GACNNNNNGTC 1 cut(s) 91
BmeT110I CYCGRG 2 cut(s) 745, 1120
BmgT120I GGNCC 2 cut(s) 123, 685
BmiI GGNNCC 3 cut(s) 76, 556, 687
BmrFI CCNGG 2 cut(s) 344, 520
BmrI ACTGGG 2 cut(s) 593, 960
BmsI GCATC 4 cut(s) 122, 205, 1040, 1267
BmtI GCTAGC 1 cut(s) 1251
BmuI ACTGGG 2 cut(s) 593, 960
BpiI GAAGAC 2 cut(s) 39, 362
BplI GAGNNNNNCTC 2 cut(s) 800, 832
Bpu10I CCTNAGC 1 cut(s) 927
Bpu14I TTCGAA 1 cut(s) 494
BpuEI CTTGAG 1 cut(s) 800
BpuMI CCSGG 1 cut(s) 344
BsaHI GRCGYC 1 cut(s) 179
BsaJI CCNNGG 1 cut(s) 384
BsaWI WCCGGW 1 cut(s) 1051
BsaXI ACNNNNNCTCC 6 cut(s) 14, 44, 392, 422, 836, 866
Bsc4I CCNNNNNNNGG 5 cut(s) 68, 497, 1013, 1027, 1296
Bse1I ACTGG 2 cut(s) 599, 955
Bse3DI GCAATG 1 cut(s) 675
BseAI TCCGGA 1 cut(s) 1051
BseBI CCWGG 1 cut(s) 520
BseDI CCNNGG 1 cut(s) 384
BseGI GGATG 1 cut(s) 196
BseLI CCNNNNNNNGG 5 cut(s) 68, 497, 1013, 1027, 1296
BseMI GCAATG 1 cut(s) 675
BseMII CTCAG 1 cut(s) 918
BseNI ACTGG 2 cut(s) 599, 955
BseRI GAGGAG 3 cut(s) 724, 805, 944
BseX3I CGGCCG 1 cut(s) 308
BseXI GCAGC 2 cut(s) 1030, 1193
BseYI CCCAGC 1 cut(s) 503
BsgI GTGCAG 1 cut(s) 1187
Bsh1236I CGCG 2 cut(s) 397, 705
Bsh1285I CGRYCG 1 cut(s) 311
BshFI GGCC 2 cut(s) 125, 310
BshNI GGYRCC 1 cut(s) 554
BsiEI CGRYCG 1 cut(s) 311
BsiHKCI CYCGRG 2 cut(s) 745, 1120
BsiSI CCGG 3 cut(s) 62, 343, 1052
BslFI GGGAC 2 cut(s) 798, 1233
BslI CCNNNNNNNGG 5 cut(s) 68, 497, 1013, 1027, 1296
BsmFI GGGAC 2 cut(s) 798, 1233
BsmI GAATGC 2 cut(s) 541, 720
BsnI GGCC 2 cut(s) 125, 310
BsoBI CYCGRG 2 cut(s) 745, 1120
Bsp119I TTCGAA 1 cut(s) 494
Bsp13I TCCGGA 1 cut(s) 1051
Bsp143I GATC 7 cut(s) 258, 404, 449, 479, 587, 620, 775
BspANI GGCC 2 cut(s) 125, 310
BspCNI CTCAG 1 cut(s) 919
BspEI TCCGGA 1 cut(s) 1051
BspFNI CGCG 2 cut(s) 397, 705
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 3 cut(s) 76, 556, 687
BspMAI CTGCAG 2 cut(s) 1144, 1183
BspMI ACCTGC 2 cut(s) 580, 1096
BspOI GCTAGC 1 cut(s) 1251
BspPI GGATC 5 cut(s) 412, 457, 487, 582, 628
BspT104I TTCGAA 1 cut(s) 494
BspT107I GGYRCC 1 cut(s) 554
BsrDI GCAATG 1 cut(s) 675
BsrI ACTGG 2 cut(s) 599, 955
BssECI CCNNGG 1 cut(s) 384
BssMI GATC 7 cut(s) 258, 404, 449, 479, 587, 620, 775
BssNI GRCGYC 1 cut(s) 179
Bst2UI CCWGG 1 cut(s) 520
Bst4CI ACNGT 2 cut(s) 325, 418
Bst6I CTCTTC 1 cut(s) 240
BstACI GRCGYC 1 cut(s) 179
BstBI TTCGAA 1 cut(s) 494
BstC8I GCNNGC 4 cut(s) 609, 762, 1001, 1249
BstDEI CTNAG 2 cut(s) 927, 1252
BstDSI CCRYGG 1 cut(s) 384
BstENI CCTNNNNNAGG 1 cut(s) 495
BstF5I GGATG 1 cut(s) 196
BstFNI CGCG 2 cut(s) 397, 705
BstH2I RGCGCY 1 cut(s) 59
BstHHI GCGC 2 cut(s) 58, 113
BstKTI GATC 7 cut(s) 261, 407, 452, 482, 590, 623, 778
BstMBI GATC 7 cut(s) 258, 404, 449, 479, 587, 620, 775
BstMCI CGRYCG 1 cut(s) 311
BstMWI GCNNNNNNNGC 6 cut(s) 181, 193, 380, 386, 437, 908
BstNI CCWGG 1 cut(s) 520
BstNSI RCATGY 2 cut(s) 307, 1003
BstSCI CCNGG 2 cut(s) 342, 518
BstSFI CTRYAG 3 cut(s) 213, 1140, 1179
BstUI CGCG 2 cut(s) 397, 705
BstV1I GCAGC 2 cut(s) 1030, 1193
BstV2I GAAGAC 2 cut(s) 39, 362
BstX2I RGATCY 2 cut(s) 479, 587
BstYI RGATCY 2 cut(s) 479, 587
BstZI CGGCCG 1 cut(s) 308
BsuRI GGCC 2 cut(s) 125, 310
BtgI CCRYGG 1 cut(s) 384
BtsCI GGATG 1 cut(s) 196
BtsIMutI CAGTG 1 cut(s) 24
BveI ACCTGC 2 cut(s) 580, 1096
Cac8I GCNNGC 4 cut(s) 609, 762, 1001, 1249
CciI TCATGA 1 cut(s) 1114
CciNI GCGGCCGC 1 cut(s) 308
CfoI GCGC 2 cut(s) 58, 113
Cfr13I GGNCC 2 cut(s) 123, 685
CseI GACGC 4 cut(s) 187, 750, 818, 1049
Csp6I GTAC 4 cut(s) 340, 419, 465, 853
CviAII CATG 7 cut(s) 304, 542, 682, 964, 971, 1000, 1115
CviQI GTAC 4 cut(s) 340, 419, 465, 853
DdeI CTNAG 2 cut(s) 927, 1252
DpnI GATC 7 cut(s) 260, 406, 451, 481, 589, 622, 777
DpnII GATC 7 cut(s) 258, 404, 449, 479, 587, 620, 775
DraI TTTAAA 1 cut(s) 885
DraIII CACNNNGTG 1 cut(s) 554
DrdI GACNNNNNNGTC 1 cut(s) 1124
DriI GACNNNNNGTC 1 cut(s) 91
DseDI GACNNNNNNGTC 1 cut(s) 1124
EaeI YGGCCR 1 cut(s) 308
EagI CGGCCG 1 cut(s) 308
Eam1104I CTCTTC 1 cut(s) 240
Eam1105I GACNNNNNGTC 1 cut(s) 91
EarI CTCTTC 1 cut(s) 240
EciI GGCGGA 2 cut(s) 87, 1296
EclXI CGGCCG 1 cut(s) 308
Eco32I GATATC 1 cut(s) 895
Eco47I GGWCC 1 cut(s) 685
Eco52I CGGCCG 1 cut(s) 308
Eco57I CTGAAG 5 cut(s) 374, 504, 675, 1008, 1220
Eco88I CYCGRG 2 cut(s) 745, 1120
EcoNI CCTNNNNNAGG 1 cut(s) 495
EcoRII CCWGG 1 cut(s) 518
EcoRV GATATC 1 cut(s) 895
FaeI CATG 7 cut(s) 307, 545, 685, 967, 974, 1003, 1118
FaqI GGGAC 2 cut(s) 798, 1233
FatI CATG 7 cut(s) 303, 541, 681, 963, 970, 999, 1114
FauI CCCGC 1 cut(s) 390
FbaI TGATCA 1 cut(s) 258
FokI GGATG 1 cut(s) 183
FspBI CTAG 3 cut(s) 615, 738, 1248
GlaI GCGC 2 cut(s) 57, 112
GsaI CCCAGC 1 cut(s) 507
HaeII RGCGCY 1 cut(s) 59
HaeIII GGCC 2 cut(s) 125, 310
HapII CCGG 3 cut(s) 62, 343, 1052
HgaI GACGC 4 cut(s) 187, 750, 818, 1049
HhaI GCGC 2 cut(s) 58, 113
Hin1I GRCGYC 1 cut(s) 179
Hin1II CATG 7 cut(s) 307, 545, 685, 967, 974, 1003, 1118
Hin6I GCGC 2 cut(s) 56, 111
HinP1I GCGC 2 cut(s) 56, 111
HincII GTYRAC 1 cut(s) 871
HindII GTYRAC 1 cut(s) 871
HindIII AAGCTT 1 cut(s) 147
HinfI GANTC 7 cut(s) 329, 425, 731, 804, 839, 1125, 1136
HpaII CCGG 3 cut(s) 62, 343, 1052
HphI GGTGA 6 cut(s) 159, 212, 313, 424, 671, 949
Hpy166II GTNNAC 1 cut(s) 871
Hpy188I TCNGA 9 cut(s) 34, 118, 334, 479, 484, 834, 844, 982, 1027
Hpy188III TCNNGA 9 cut(s) 227, 352, 627, 747, 779, 808, 1052, 1115, 1129
Hpy8I GTNNAC 1 cut(s) 871
Hpy99I CGWCG 5 cut(s) 83, 86, 181, 242, 329
HpyAV CCTTC 9 cut(s) 136, 210, 501, 573, 650, 1032, 1161, 1239, 1244
HpyCH4III ACNGT 2 cut(s) 325, 418
HpyCH4IV ACGT 3 cut(s) 240, 1146, 1164
HpyCH4V TGCA 7 cut(s) 545, 575, 668, 1142, 1168, 1181, 1264
HpyF10VI GCNNNNNNNGC 6 cut(s) 181, 193, 380, 386, 437, 908
HpyF3I CTNAG 2 cut(s) 927, 1252
HpySE526I ACGT 3 cut(s) 240, 1146, 1164
Hsp92I GRCGYC 1 cut(s) 179
Hsp92II CATG 7 cut(s) 307, 545, 685, 967, 974, 1003, 1118
HspAI GCGC 2 cut(s) 56, 111
Kpn2I TCCGGA 1 cut(s) 1051
Ksp22I TGATCA 1 cut(s) 258
Kzo9I GATC 7 cut(s) 258, 404, 449, 479, 587, 620, 775
LmnI GCTCC 4 cut(s) 74, 500, 1054, 1300
Lsp1109I GCAGC 2 cut(s) 1030, 1193
LweI GCATC 4 cut(s) 122, 205, 1040, 1267
MaeI CTAG 3 cut(s) 615, 738, 1248
MaeII ACGT 3 cut(s) 240, 1146, 1164
MaeIII GTNAC 3 cut(s) 319, 412, 567
MalI GATC 7 cut(s) 260, 406, 451, 481, 589, 622, 777
MboI GATC 7 cut(s) 258, 404, 449, 479, 587, 620, 775
MfeI CAATTG 1 cut(s) 1294
MflI RGATCY 2 cut(s) 479, 587
MluCI AATT 3 cut(s) 98, 797, 1294
MluI ACGCGT 1 cut(s) 703
MlyI GAGTC 3 cut(s) 740, 813, 1134
MmeI TCCRAC 1 cut(s) 57
MroI TCCGGA 1 cut(s) 1051
MroXI GAANNNNTTC 2 cut(s) 1021, 1228
MseI TTAA 3 cut(s) 252, 800, 884
MslI CAYNNNNRTG 1 cut(s) 118
MspA1I CMGCKG 2 cut(s) 40, 447
MspI CCGG 3 cut(s) 62, 343, 1052
MspR9I CCNGG 2 cut(s) 344, 520
MunI CAATTG 1 cut(s) 1294
Mva1269I GAATGC 2 cut(s) 541, 720
MvaI CCWGG 1 cut(s) 520
MvnI CGCG 2 cut(s) 397, 705
MwoI GCNNNNNNNGC 6 cut(s) 181, 193, 380, 386, 437, 908
NciI CCSGG 1 cut(s) 344
NdeII GATC 7 cut(s) 258, 404, 449, 479, 587, 620, 775
NheI GCTAGC 1 cut(s) 1247
NlaIII CATG 7 cut(s) 307, 545, 685, 967, 974, 1003, 1118
NlaIV GGNNCC 3 cut(s) 76, 556, 687
NmuCI GTSAC 2 cut(s) 319, 412
NotI GCGGCCGC 1 cut(s) 308
NspI RCATGY 2 cut(s) 307, 1003
NspV TTCGAA 1 cut(s) 494
PaeI GCATGC 1 cut(s) 1003
PaeR7I CTCGAG 1 cut(s) 745
PagI TCATGA 1 cut(s) 1114
PcsI WCGNNNNNNNCGW 1 cut(s) 234
PctI GAATGC 2 cut(s) 541, 720
PdmI GAANNNNTTC 2 cut(s) 1021, 1228
PfeI GAWTC 4 cut(s) 329, 425, 839, 1136
PflMI CCANNNNNTGG 1 cut(s) 1013
PleI GAGTC 3 cut(s) 739, 812, 1133
PpsI GAGTC 3 cut(s) 739, 812, 1133
Psp6I CCWGG 1 cut(s) 518
PspFI CCCAGC 1 cut(s) 503
PspGI CCWGG 1 cut(s) 518
PspN4I GGNNCC 3 cut(s) 76, 556, 687
PspPI GGNCC 2 cut(s) 123, 685
PsrI GAACNNNNNNTAC 2 cut(s) 332, 364
PstI CTGCAG 2 cut(s) 1144, 1183
PsuI RGATCY 2 cut(s) 479, 587
PvuII CAGCTG 1 cut(s) 40
RsaI GTAC 4 cut(s) 341, 420, 466, 854
RsaNI GTAC 4 cut(s) 340, 419, 465, 853
RseI CAYNNNNRTG 1 cut(s) 118
SaqAI TTAA 3 cut(s) 252, 800, 884
Sau3AI GATC 7 cut(s) 258, 404, 449, 479, 587, 620, 775
Sau96I GGNCC 2 cut(s) 123, 685
ScaI AGTACT 1 cut(s) 466
SchI GAGTC 3 cut(s) 740, 813, 1134
ScrFI CCNGG 2 cut(s) 344, 520
SfaNI GCATC 4 cut(s) 122, 205, 1040, 1267
SfcI CTRYAG 3 cut(s) 213, 1140, 1179
Sfr274I CTCGAG 1 cut(s) 745
SfuI TTCGAA 1 cut(s) 494
SinI GGWCC 1 cut(s) 685
SlaI CTCGAG 1 cut(s) 745
SmiMI CAYNNNNRTG 1 cut(s) 118
SmlI CTYRAG 2 cut(s) 745, 779
SmoI CTYRAG 2 cut(s) 745, 779
SphI GCATGC 1 cut(s) 1003
Sse9I AATT 3 cut(s) 98, 797, 1294
SspMI CTAG 3 cut(s) 615, 738, 1248
StyD4I CCNGG 2 cut(s) 342, 518
TaaI ACNGT 2 cut(s) 325, 418
TaiI ACGT 3 cut(s) 243, 1149, 1167
TaqI TCGA 7 cut(s) 327, 366, 494, 626, 746, 807, 897
TasI AATT 3 cut(s) 98, 797, 1294
TatI WGTACW 3 cut(s) 418, 464, 852
TauI GCSGC 8 cut(s) 61, 184, 187, 310, 313, 383, 434, 866
TfiI GAWTC 4 cut(s) 329, 425, 839, 1136
Tru1I TTAA 3 cut(s) 252, 800, 884
Tru9I TTAA 3 cut(s) 252, 800, 884
TscAI CASTG 1 cut(s) 24
TseFI GTSAC 2 cut(s) 319, 412
TseI GCWGC 2 cut(s) 1043, 1181
Tsp45I GTSAC 2 cut(s) 319, 412
TspDTI ATGAA 2 cut(s) 686, 873
TspRI CASTG 1 cut(s) 24
Van91I CCANNNNNTGG 1 cut(s) 1013
VpaK11BI GGWCC 1 cut(s) 685
XagI CCTNNNNNAGG 1 cut(s) 495
XceI RCATGY 2 cut(s) 307, 1003
XhoI CTCGAG 1 cut(s) 745
XmnI GAANNNNTTC 2 cut(s) 1021, 1228
XspI CTAG 3 cut(s) 615, 738, 1248
ZrmI AGTACT 1 cut(s) 466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.