Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0010782

Physical Location & Seq

Genomic Coordinates Reverse (-)

2308195 .. 2312418

Gene Structure 4224 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG035100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGGATAGGGTGTTCTCTTCCATGGGTGAAATGTCAGACCATCTCTGGTCTTCTTCTTCTTCTTGTGCACCAGTACCACCTGGAACTAATGTAAATGAAGATGAAGATGAGCTTTCCAAAATGAACAGGAGCGCTTCAGAGTGGGCCTTCCAGCGTTTTCTCCAACAAGAAGCCTCTGTTTCACCTTCATCTTCCTCACAAGCTCAAAATGATGTTGAAGAAACCAAGGTCAATGCAACAAGTATGGCCTTACCAAATGGGCAAAACCCCACAAACACTAACAGCAGTGCGGCGTCGTTTAAGGCTCCTAATGTTCCTGTTGATTCTGAGGAGTACCAGGCCTTCCTCAAGACCAAGCTCGATCTGGCTTGTGCTGCTGTGGCCTTGTCTCGTGTAAAGGGATCTTTAGTGAAAGCTCAAGATTCTGCTTCTTTAGCTGACAGTGGGCAACAGGCTTCCGATGCTTTGCAACTGGGATCTCAAGCCCCCTTTGAAGGAGCTGGGAATGATTTATGCAGGTCATATGATAAGAATGCTACTGCACCACTTGGAATTCCTTCATTGCCAACGATACAAAGTAGATCTGGGGCTTCAATAAGGCAAGCAACAAGTGGATCATCAAGAGAACTCTCAGATTATGAGGAAGTTGAAGGAGAAACTGCAATGACTGAAAATATGGACCCTACTGATGCGAAACGTGTGAGGAGAATGCTCTCTAATAGAGAATCAGCTAGACGCTCAAGAAGAAGAAAGCAGGCCCATTTGACTGAGCTTGAGACACAGGCATCTCAATTAAGAGTTGAGAACTCCTCTTTATTGAAGCGTCTGACTGATATAAACCAGAAGTACAATGAAGCATCTGTTGACAACAGAGTTTTGAGAGCTGATATTGAAACATTGAGAGCAAAGGTAAAGATGGCTGAGGAGACGGTGAAAAGACTAACCGGATCAAACTCTGTGTTTCATACTATGTCAGATGTGTCCTCAATCAGCATGGCACCATTTGATGGAAGCCCATCAGAAACATCAGCAGATGCTGCTGTTCCCGTGCAAGATGACCCAAACCATCACTATTTCCAACCTGCTTCCAATAACTCCATGCCAACTGACTTCAGAGGCAACAATGGTTTGGCAGATAATACCCCTTCAGTTGAAAATGCGCAGCAGACTTCTGCAGCAACATCAAAAGAAGTGGTGGGAAACAAGATGGGACGAACACTTTCCTTACCGCGAGTTGCTAGCTTAGAGCATCTCCAGAAGCGGATCCGCGGTGGAGAGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001678 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010581 GO:0010604 GO:0010628 GO:0010675 GO:0010962 GO:0019219 GO:0019222 GO:0019725 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032870 GO:0032881 GO:0032885 GO:0033500 GO:0033993 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046982 GO:0046983 GO:0048518 GO:0048522 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0055082 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071396 GO:0071495 GO:0080090 GO:0097159 GO:0097305 GO:0097306 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000904 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1 bZIP_C

Protein Analysis

427

Amino Acids

46.2

Weight (kDa)

5.39

Isoelectric Point (pI)

61.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	229 - 278	1.5e-07	Basic region leucine zipper
bZIP_1	PF00170	231 - 284	1.3e-12	bZIP transcription factor
bZIP_C	PF12498	299 - 425	2.2e-42	Basic leucine-zipper C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28770 AT5G28770 AT5G28770 AT5G28770
fragaria_vesca	FvH4_6g02940
malus_domestica	MD04G1224400.v1.1 MD12G1241100.v1.1
prunus_persica	Prupe.6G343100_v2.0.a1
pyrus_communis	pycom04g19770 pycom12g22080
rosa_chinensis	RchiOBHm_Chr3g0451141
rosa_laevigata	RLG00000025686
rosa_multiflora	Rmu_ssc0000028.1_g000005
rosa_roxburghii	Rroxscaffold_6G00428610
rosa_rugosa	Rorug02G0631900
rosa_samantha	Rh3AG034700 Rh3BG035100 Rh3CG033600 Rh3DG034700
rosa_wichuraiana	Rw3G002530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1161
Acc36I	ACCTGC	2 cut(s)	507, 1090
AccB1I	GGYRCC	1 cut(s)	997
AccB7I	CCANNNNNTGG	1 cut(s)	1007
AccII	CGCG	2 cut(s)	1231, 1269
AciI	CCGC	5 cut(s)	290, 1229, 1261, 1267, 1269
AclWI	GGATC	6 cut(s)	409, 484, 622, 955, 1258, 1271
AcsI	RAATTY	1 cut(s)	552
AcuI	CTGAAG	3 cut(s)	120, 1096, 1131
AcyI	GRCGYC	1 cut(s)	293
AfaI	GTAC	3 cut(s)	75, 335, 848
AfeI	AGCGCT	1 cut(s)	133
AfiI	CCNNNNNNNGG	2 cut(s)	494, 1007
AflIII	ACRYGT	1 cut(s)	697
AgsI	TTSAA	7 cut(s)	218, 494, 594, 650, 820, 893, 1154
AjnI	CCWGG	2 cut(s)	79, 336
AloI	GAACNNNNNNTCC	1 cut(s)	28
Alw21I	GWGCWC	1 cut(s)	70
Alw26I	GTCTC	3 cut(s)	393, 770, 920
Alw44I	GTGCAC	1 cut(s)	66
AlwI	GGATC	6 cut(s)	409, 484, 622, 955, 1258, 1271
AlwNI	CAGNNNCTG	1 cut(s)	1037
Aor51HI	AGCGCT	1 cut(s)	133
AoxI	GGCC	5 cut(s)	144, 246, 339, 381, 756
ApaLI	GTGCAC	1 cut(s)	66
ApeKI	GCWGC	4 cut(s)	374, 1037, 1162, 1175
ApoI	RAATTY	1 cut(s)	552
Asp700I	GAANNNNTTC	2 cut(s)	556, 1219
AspLEI	GCGC	2 cut(s)	134, 1162
AspS9I	GGNCC	3 cut(s)	144, 679, 757
AsuHPI	GGTGA	3 cut(s)	38, 174, 943
AsuNHI	GCTAGC	1 cut(s)	1238
AvaII	GGWCC	1 cut(s)	679
BaeGI	GKGCMC	1 cut(s)	70
BamHI	GGATCC	1 cut(s)	1263
BanI	GGYRCC	1 cut(s)	997
BarI	GAAGNNNNNNTAC	2 cut(s)	326, 358
BauI	CACGAG	1 cut(s)	390
BbsI	GAAGAC	1 cut(s)	42
Bbv12I	GWGCWC	1 cut(s)	70
BbvCI	CCTCAGC	1 cut(s)	921
BbvI	GCAGC	4 cut(s)	361, 1024, 1174, 1187
BccI	CCATC	6 cut(s)	48, 910, 1001, 1024, 1074, 1201
BciT130I	CCWGG	2 cut(s)	81, 338
BcoDI	GTCTC	3 cut(s)	393, 770, 920
BfaI	CTAG	2 cut(s)	732, 1239
BfmI	CTRYAG	1 cut(s)	1173
BfoI	RGCGCY	1 cut(s)	135
BfuAI	ACCTGC	2 cut(s)	507, 1090
BglII	AGATCT	1 cut(s)	581
BisI	GCNGC	5 cut(s)	291, 375, 1038, 1163, 1176
BlsI	GCNGC	5 cut(s)	292, 376, 1039, 1164, 1177
Bme1390I	CCNGG	2 cut(s)	81, 338
Bme18I	GGWCC	1 cut(s)	679
BmgT120I	GGNCC	3 cut(s)	144, 679, 757
BmiI	GGNNCC	4 cut(s)	306, 681, 999, 1265
BmrFI	CCNGG	2 cut(s)	81, 338
BmrI	ACTGGG	1 cut(s)	482
BmsI	GCATC	6 cut(s)	451, 679, 794, 866, 1024, 1258
BmtI	GCTAGC	1 cut(s)	1242
BmuI	ACTGGG	1 cut(s)	482
BpiI	GAAGAC	1 cut(s)	42
BplI	GAGNNNNNCTC	2 cut(s)	794, 826
BpmI	CTGGAG	1 cut(s)	1238
Bpu10I	CCTNAGC	1 cut(s)	921
BpuEI	CTTGAG	5 cut(s)	332, 402, 465, 724, 794
BsaHI	GRCGYC	1 cut(s)	293
BsaJI	CCNNGG	3 cut(s)	21, 225, 1267
BsaWI	WCCGGW	1 cut(s)	944
Bsc4I	CCNNNNNNNGG	2 cut(s)	494, 1007
Bse1I	ACTGG	2 cut(s)	71, 477
Bse3DI	GCAATG	2 cut(s)	560, 669
BseBI	CCWGG	2 cut(s)	81, 338
BseDI	CCNNGG	3 cut(s)	21, 225, 1267
BseLI	CCNNNNNNNGG	2 cut(s)	494, 1007
BseMI	GCAATG	2 cut(s)	560, 669
BseMII	CTCAG	4 cut(s)	318, 645, 759, 912
BseNI	ACTGG	2 cut(s)	71, 477
BseRI	GAGGAG	4 cut(s)	344, 718, 799, 938
BseSI	GKGCMC	1 cut(s)	70
BseXI	GCAGC	4 cut(s)	361, 1024, 1174, 1187
BseYI	CCCAGC	1 cut(s)	500
BsgI	GTGCAG	1 cut(s)	525
Bsh1236I	CGCG	2 cut(s)	1231, 1269
BshFI	GGCC	5 cut(s)	146, 248, 341, 383, 758
BshNI	GGYRCC	1 cut(s)	997
BsiHKAI	GWGCWC	1 cut(s)	70
BsiSI	CCGG	1 cut(s)	945
BslFI	GGGAC	1 cut(s)	1224
BslI	CCNNNNNNNGG	2 cut(s)	494, 1007
BsmAI	GTCTC	3 cut(s)	393, 770, 920
BsmBI	CGTCTC	1 cut(s)	920
BsmFI	GGGAC	1 cut(s)	1224
BsmI	GAATGC	2 cut(s)	538, 714
BsnI	GGCC	5 cut(s)	146, 248, 341, 383, 758
Bsp1286I	GDGCHC	1 cut(s)	70
Bsp143I	GATC	7 cut(s)	361, 401, 476, 581, 614, 947, 1263
Bsp19I	CCATGG	1 cut(s)	21
BspACI	CCGC	5 cut(s)	290, 1229, 1261, 1267, 1269
BspANI	GGCC	5 cut(s)	146, 248, 341, 383, 758
BspCNI	CTCAG	4 cut(s)	319, 644, 760, 913
BspFNI	CGCG	2 cut(s)	1231, 1269
BspLI	GGNNCC	4 cut(s)	306, 681, 999, 1265
BspMAI	CTGCAG	1 cut(s)	1177
BspMI	ACCTGC	2 cut(s)	507, 1090
BspOI	GCTAGC	1 cut(s)	1242
BspPI	GGATC	6 cut(s)	409, 484, 622, 955, 1258, 1271
BspT107I	GGYRCC	1 cut(s)	997
BsrDI	GCAATG	2 cut(s)	560, 669
BsrI	ACTGG	2 cut(s)	71, 477
BssECI	CCNNGG	3 cut(s)	21, 225, 1267
BssMI	GATC	7 cut(s)	361, 401, 476, 581, 614, 947, 1263
BssNI	GRCGYC	1 cut(s)	293
BssSI	CACGAG	1 cut(s)	390
BssT1I	CCWWGG	2 cut(s)	21, 225
Bst2BI	CACGAG	1 cut(s)	390
Bst2UI	CCWGG	2 cut(s)	81, 338
Bst4CI	ACNGT	2 cut(s)	443, 931
Bst6I	CTCTTC	1 cut(s)	22
BstACI	GRCGYC	1 cut(s)	293
BstAPI	GCANNNNNTGC	1 cut(s)	1037
BstC8I	GCNNGC	3 cut(s)	603, 756, 1240
BstDEI	CTNAG	5 cut(s)	327, 631, 768, 921, 1243
BstDSI	CCRYGG	2 cut(s)	21, 1267
BstFNI	CGCG	2 cut(s)	1231, 1269
BstH2I	RGCGCY	1 cut(s)	135
BstHHI	GCGC	2 cut(s)	134, 1162
BstKTI	GATC	7 cut(s)	364, 404, 479, 584, 617, 950, 1266
BstMAI	GTCTC	3 cut(s)	393, 770, 920
BstMBI	GATC	7 cut(s)	361, 401, 476, 581, 614, 947, 1263
BstMWI	GCNNNNNNNGC	5 cut(s)	374, 380, 434, 461, 1037
BstNI	CCWGG	2 cut(s)	81, 338
BstSCI	CCNGG	2 cut(s)	79, 336
BstSFI	CTRYAG	1 cut(s)	1173
BstSLI	GKGCMC	1 cut(s)	70
BstUI	CGCG	2 cut(s)	1231, 1269
BstV1I	GCAGC	4 cut(s)	361, 1024, 1174, 1187
BstV2I	GAAGAC	1 cut(s)	42
BstX2I	RGATCY	4 cut(s)	401, 476, 581, 1263
BstYI	RGATCY	4 cut(s)	401, 476, 581, 1263
BsuRI	GGCC	5 cut(s)	146, 248, 341, 383, 758
BtgI	CCRYGG	2 cut(s)	21, 1267
BtsI	GCAGTG	1 cut(s)	292
BtsIMutI	CAGTG	2 cut(s)	292, 448
BveI	ACCTGC	2 cut(s)	507, 1090
Cac8I	GCNNGC	3 cut(s)	603, 756, 1240
CaiI	CAGNNNCTG	1 cut(s)	1037
CfoI	GCGC	2 cut(s)	134, 1162
Cfr13I	GGNCC	3 cut(s)	144, 679, 757
Cfr42I	CCGCGG	1 cut(s)	1270
CseI	GACGC	3 cut(s)	282, 744, 812
Csp6I	GTAC	3 cut(s)	74, 334, 847
CspCI	CAANNNNNGTGG	2 cut(s)	1173, 1208
CviAII	CATG	3 cut(s)	22, 994, 1099
CviQI	GTAC	3 cut(s)	74, 334, 847
DdeI	CTNAG	5 cut(s)	327, 631, 768, 921, 1243
DpnI	GATC	7 cut(s)	363, 403, 478, 583, 616, 949, 1265
DpnII	GATC	7 cut(s)	361, 401, 476, 581, 614, 947, 1263
Eam1104I	CTCTTC	1 cut(s)	22
EarI	CTCTTC	1 cut(s)	22
Eco130I	CCWWGG	2 cut(s)	21, 225
Eco147I	AGGCCT	1 cut(s)	341
Eco47I	GGWCC	1 cut(s)	679
Eco47III	AGCGCT	1 cut(s)	133
Eco57I	CTGAAG	3 cut(s)	120, 1096, 1131
EcoRI	GAATTC	1 cut(s)	552
EcoRII	CCWGG	2 cut(s)	79, 336
EcoT14I	CCWWGG	2 cut(s)	21, 225
ErhI	CCWWGG	2 cut(s)	21, 225
Esp3I	CGTCTC	1 cut(s)	920
FaeI	CATG	3 cut(s)	25, 997, 1102
FalI	AAGNNNNNCTT	2 cut(s)	96, 128
FaqI	GGGAC	1 cut(s)	1224
FatI	CATG	3 cut(s)	21, 993, 1098
FauNDI	CATATG	1 cut(s)	523
Fnu4HI	GCNGC	5 cut(s)	291, 375, 1038, 1163, 1176
Fsp4HI	GCNGC	5 cut(s)	291, 375, 1038, 1163, 1176
FspBI	CTAG	2 cut(s)	732, 1239
FspI	TGCGCA	1 cut(s)	1161
GlaI	GCGC	2 cut(s)	133, 1161
GluI	GCNGC	5 cut(s)	291, 375, 1038, 1163, 1176
GsaI	CCCAGC	1 cut(s)	504
GsuI	CTGGAG	1 cut(s)	1238
HaeII	RGCGCY	1 cut(s)	135
HaeIII	GGCC	5 cut(s)	146, 248, 341, 383, 758
HapII	CCGG	1 cut(s)	945
HgaI	GACGC	3 cut(s)	282, 744, 812
HhaI	GCGC	2 cut(s)	134, 1162
Hin1I	GRCGYC	1 cut(s)	293
Hin1II	CATG	3 cut(s)	25, 997, 1102
Hin6I	GCGC	2 cut(s)	132, 1160
HinP1I	GCGC	2 cut(s)	132, 1160
HincII	GTYRAC	1 cut(s)	865
HindII	GTYRAC	1 cut(s)	865
HinfI	GANTC	3 cut(s)	323, 422, 725
HpaII	CCGG	1 cut(s)	945
HphI	GGTGA	3 cut(s)	38, 174, 943
Hpy166II	GTNNAC	2 cut(s)	68, 865
Hpy188I	TCNGA	9 cut(s)	37, 139, 328, 460, 634, 828, 976, 1021, 1115
Hpy188III	TCNNGA	5 cut(s)	349, 419, 621, 741, 1255
Hpy8I	GTNNAC	2 cut(s)	68, 865
Hpy99I	CGWCG	1 cut(s)	298
HpyAV	CCTTC	7 cut(s)	157, 195, 352, 488, 567, 644, 1155
HpyCH4III	ACNGT	2 cut(s)	443, 931
HpyCH4IV	ACGT	1 cut(s)	697
HpyCH4V	TGCA	8 cut(s)	68, 236, 469, 516, 542, 662, 1051, 1175
HpyF10VI	GCNNNNNNNGC	5 cut(s)	374, 380, 434, 461, 1037
HpyF3I	CTNAG	5 cut(s)	327, 631, 768, 921, 1243
HpySE526I	ACGT	1 cut(s)	697
Hsp92I	GRCGYC	1 cut(s)	293
Hsp92II	CATG	3 cut(s)	25, 997, 1102
HspAI	GCGC	2 cut(s)	132, 1160
KspI	CCGCGG	1 cut(s)	1270
Kzo9I	GATC	7 cut(s)	361, 401, 476, 581, 614, 947, 1263
LmnI	GCTCC	3 cut(s)	129, 310, 497
Lsp1109I	GCAGC	4 cut(s)	361, 1024, 1174, 1187
LweI	GCATC	6 cut(s)	451, 679, 794, 866, 1024, 1258
MaeI	CTAG	2 cut(s)	732, 1239
MaeII	ACGT	1 cut(s)	697
MalI	GATC	7 cut(s)	363, 403, 478, 583, 616, 949, 1265
MboI	GATC	7 cut(s)	361, 401, 476, 581, 614, 947, 1263
MflI	RGATCY	4 cut(s)	401, 476, 581, 1263
MhlI	GDGCHC	1 cut(s)	70
MluCI	AATT	2 cut(s)	552, 791
MmeI	TCCRAC	2 cut(s)	187, 1102
MroXI	GAANNNNTTC	2 cut(s)	556, 1219
MseI	TTAA	2 cut(s)	300, 794
MspA1I	CMGCKG	1 cut(s)	1269
MspI	CCGG	1 cut(s)	945
MspR9I	CCNGG	2 cut(s)	81, 338
Mva1269I	GAATGC	2 cut(s)	538, 714
MvaI	CCWGG	2 cut(s)	81, 338
MvnI	CGCG	2 cut(s)	1231, 1269
MwoI	GCNNNNNNNGC	5 cut(s)	374, 380, 434, 461, 1037
NcoI	CCATGG	1 cut(s)	21
NdeI	CATATG	1 cut(s)	523
NdeII	GATC	7 cut(s)	361, 401, 476, 581, 614, 947, 1263
NheI	GCTAGC	1 cut(s)	1238
NlaIII	CATG	3 cut(s)	25, 997, 1102
NlaIV	GGNNCC	4 cut(s)	306, 681, 999, 1265
NsbI	TGCGCA	1 cut(s)	1161
PceI	AGGCCT	1 cut(s)	341
PctI	GAATGC	2 cut(s)	538, 714
PdmI	GAANNNNTTC	2 cut(s)	556, 1219
PfeI	GAWTC	3 cut(s)	323, 422, 725
PflMI	CCANNNNNTGG	1 cut(s)	1007
PkrI	GCNGC	5 cut(s)	292, 376, 1039, 1164, 1177
Psp6I	CCWGG	2 cut(s)	79, 336
PspFI	CCCAGC	1 cut(s)	500
PspGI	CCWGG	2 cut(s)	79, 336
PspN4I	GGNNCC	4 cut(s)	306, 681, 999, 1265
PspPI	GGNCC	3 cut(s)	144, 679, 757
PstI	CTGCAG	1 cut(s)	1177
PstNI	CAGNNNCTG	1 cut(s)	1037
PsuI	RGATCY	4 cut(s)	401, 476, 581, 1263
RsaI	GTAC	3 cut(s)	75, 335, 848
RsaNI	GTAC	3 cut(s)	74, 334, 847
SacII	CCGCGG	1 cut(s)	1270
SaqAI	TTAA	2 cut(s)	300, 794
SatI	GCNGC	5 cut(s)	291, 375, 1038, 1163, 1176
Sau3AI	GATC	7 cut(s)	361, 401, 476, 581, 614, 947, 1263
Sau96I	GGNCC	3 cut(s)	144, 679, 757
ScrFI	CCNGG	2 cut(s)	81, 338
SduI	GDGCHC	1 cut(s)	70
SfaNI	GCATC	6 cut(s)	451, 679, 794, 866, 1024, 1258
SfcI	CTRYAG	1 cut(s)	1173
Sfr303I	CCGCGG	1 cut(s)	1270
SgrBI	CCGCGG	1 cut(s)	1270
SinI	GGWCC	1 cut(s)	679
SmlI	CTYRAG	5 cut(s)	347, 417, 480, 739, 773
SmoI	CTYRAG	5 cut(s)	347, 417, 480, 739, 773
Sse9I	AATT	2 cut(s)	552, 791
SseBI	AGGCCT	1 cut(s)	341
SsiI	CCGC	5 cut(s)	290, 1229, 1261, 1267, 1269
SspMI	CTAG	2 cut(s)	732, 1239
StuI	AGGCCT	1 cut(s)	341
StyD4I	CCNGG	2 cut(s)	79, 336
StyI	CCWWGG	2 cut(s)	21, 225
TaaI	ACNGT	2 cut(s)	443, 931
TaiI	ACGT	1 cut(s)	700
TaqI	TCGA	1 cut(s)	360
TasI	AATT	2 cut(s)	552, 791
TatI	WGTACW	1 cut(s)	846
TauI	GCSGC	1 cut(s)	293
TfiI	GAWTC	3 cut(s)	323, 422, 725
Tru1I	TTAA	2 cut(s)	300, 794
Tru9I	TTAA	2 cut(s)	300, 794
TscAI	CASTG	2 cut(s)	292, 448
TseI	GCWGC	4 cut(s)	374, 1037, 1162, 1175
TspDTI	ATGAA	7 cut(s)	111, 117, 137, 177, 549, 867, 953
TspRI	CASTG	2 cut(s)	292, 448
Van91I	CCANNNNNTGG	1 cut(s)	1007
VneI	GTGCAC	1 cut(s)	66
VpaK11BI	GGWCC	1 cut(s)	679
XapI	RAATTY	1 cut(s)	552
XcmI	CCANNNNNNNNNTGG	1 cut(s)	361
XmnI	GAANNNNTTC	2 cut(s)	556, 1219
XspI	CTAG	2 cut(s)	732, 1239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.