Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010782

Physical Location & Seq

Genomic Coordinates Reverse (-)

74668674 .. 74672076

Gene Structure 3403 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0631900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGAAACCCAGCTCTCAATGTTGGTTATTCTCCTCGCTTCTTTTCTAACTGCAACTACTTTTGTTTCCTGCTCCCAACTTCAAGACCCTGATCTAGTAGTACAGGAGGTCCACAGGAATATCAATGCGTCTAGGAGGCAGCTGGCCTATTCCTCATGTGGAAGTGGCAACCCCATAGACGACTGCTGGCGGTGCGACCCTAACTGGGAACAAAACCGCCAGCGCTTGGCCGATTGCGCCATCGGCTTCGGCAAGGACGCAATTGGCGGGAGAAACGGCCGAATCTACGTAGTCTCCGACTCAGGCGACGACGACCCTGTGAACCCTAGGCCCGGAACCATCCGACACGCCGTGATACAAGACGAGCCACTGTGGATCATTTTCAAGAGGGACATGGTGATCCAGCTGAAGCAAGAGCTGGTCATGAACTCGTTCAAGACCATAGACGGTAGAGGTGCGAGTGTTCACATTGCCAATGGACCATGCATCACCATACATCATGTCACCAACATCATCATCCATGGGATCAACATACACGACTGTAAGCAGGCCGGGAACGGAGACATTAGGGACTCCCCGAGCCACGCCGGGTGGTGGACGCAGTCCGACGGGGACGGCGTGTCGATTTTCGGAGGGAAGCACATTTGGGTTGACCATTGCTCACTGTCAAATTGTCACGATGGACTCATCGATGCCATACATGGATCGACGGCCATCACGATTTCGAACAACTTCATGACGCATCATGACAAGGTTATGCTTTTAGGGCACAGTGATTCGTTTACGGAAGACAAGGGCATGCAGGTCACTGTTGCGTTTAATCACTTTGGAGAAGGGCTCGTGCAAAGAATGCCAAGGTGTAGACATGGATATTTTCATGTGGTGAACAATGACTATACACATTGGGAGATGTATGCAATAGGAGGGAGTGCTGCCCCAACCATCTTAAGTCAAGGCAATAGATTTCTTGCACCGGATAGAAGTTTCGATAAAGAGGTGACAAAACATGAGGATGCGCCGGAAAGTGAGTGGAAGAGGTGGAACTGGAGATCCGAGGGGGATTTGCTGCTGAACGGCGCATTTTTCCGGCAATCGGGTGCCGGTGCATCGTCAAGCTATGCGAGGGCGTCGAGTCTCAGTGGAAGACCTTCTTCTCTTAAAGCAAAGAAGCCAGCGACCACTACGATAGTCGCGGCGGCGCCAGCGGTGGAGACCTTTCTCGCAGCAGCAGATTTCGGAGCCTCACTGGGAGGAACAACAGGGGAATCACTACCGGTAGTGGTGTCATCGGTGGGGACGGGGGGAGATGTTGCAGCCGACGAGTCTGGTACCGGTGCGGAGGAGGTTGAAGAGGAGTCGTCGGAGCTGGATGATGATGACCCCTTGGGTGGCTTGCTGCTGCTGCCTGAAGATGAAGATGAAGATGATGAGTCAGATGAATCAGATGATGAAGATCCTGACCCCTTGGGTGACGGTGCTTTGCCGCCGCTACCGCCAGAGGGAGTTGGTGCTTTAGCGCTGCCGCTACTGCTACCGCCAGAGGAAGATCCTGACCCCTTGGGTGGTGATGCTTTGCCTCCGCCGCTGCCGCTTCCGCCGCCGCTGCTACCGCCATCCGACGAGTCGGATGAAGGTCCCGGAGACGCTTTAGGTGAAGGAGACTGTTTGGGGGATGGTGCTGATTTGCCGCTTGAGCCGCCGGAAGAAGAAGAGTCTGGTGCGTTGGCGGGAGATGCCTTAGGAGATGGTGAAGAAGTGGGAGAGGATGAGGAGCCCCCCTTGTCGGACTTGGGTGACTGTGCCGATGAAGACGAGTCCGAGCCCTTCGGGGATGATGCTGATGATGATGAGGAGGAGGATGAGTCTTTCGCCTTGGGGGCATCGGCCGATGATGATGAGGAGGACGAGTCTTTCGCCTTGGGGGCATCGGCCGATGATGATGAGGAGGACGAGTCTTTCGGGTTAGGGGGTGATGCTGATGGAGAACCGTCGCCGCCGTCGCTTTCCGTGTCTTTTTTCGGATTCTTTGAGGCCTTGGAGGGTGCTGGTGACTCCGCCATGGCAACTCCGATAATGGCAACCAACATGAGAGCGAGAATGATCACTTTCCTACTCGCCATTTTGGCCATTGTCGTAGTAGTAGTGCTGAGCTTGAGGTCAGTGTTCTTCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001678 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010581 GO:0010604 GO:0010628 GO:0010675 GO:0010962 GO:0019219 GO:0019222 GO:0019725 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032870 GO:0032881 GO:0032885 GO:0033500 GO:0033993 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046982 GO:0046983 GO:0048518 GO:0048522 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0055082 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071396 GO:0071495 GO:0080090 GO:0097159 GO:0097305 GO:0097306 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000904 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1 bZIP_C

Protein Analysis

724

Amino Acids

77.11

Weight (kDa)

4.09

Isoelectric Point (pI)

50.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pectate_lyase_4	PF00544	137 - 326	9.4e-23	Pectate lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28770 AT5G28770 AT5G28770 AT5G28770
fragaria_vesca	FvH4_6g02940
malus_domestica	MD04G1224400.v1.1 MD12G1241100.v1.1
prunus_persica	Prupe.6G343100_v2.0.a1
pyrus_communis	pycom04g19770 pycom12g22080
rosa_chinensis	RchiOBHm_Chr3g0451141
rosa_laevigata	RLG00000025686
rosa_multiflora	Rmu_ssc0000028.1_g000005
rosa_roxburghii	Rroxscaffold_6G00428610
rosa_rugosa	Rorug02G0631900
rosa_samantha	Rh3AG034700 Rh3BG035100 Rh3CG033600 Rh3DG034700
rosa_wichuraiana	Rw3G002530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	793
Acc65I	GGTACC	1 cut(s)	1328
AccB1I	GGYRCC	3 cut(s)	1097, 1198, 1328
AccB7I	CCANNNNNTGG	1 cut(s)	226
AccI	GTMKAC	1 cut(s)	862
AccII	CGCG	1 cut(s)	1193
AclWI	GGATC	7 cut(s)	383, 394, 533, 712, 1044, 1448, 1541
AcoI	YGGCCR	6 cut(s)	228, 277, 711, 1884, 1929, 2124
AcuI	CTGAAG	2 cut(s)	428, 1428
AcyI	GRCGYC	2 cut(s)	1127, 1199
AdeI	CACNNNGTG	1 cut(s)	352
AfaI	GTAC	2 cut(s)	102, 1330
AfeI	AGCGCT	2 cut(s)	224, 1518
AfiI	CCNNNNNNNGG	9 cut(s)	205, 226, 332, 594, 1093, 1388, 1499, 1562, 1783
AflII	CTTAAG	1 cut(s)	946
AgeI	ACCGGT	2 cut(s)	1273, 1331
AgsI	TTSAA	4 cut(s)	83, 385, 436, 1349
AhdI	GACNNNNNGTC	1 cut(s)	619
AloI	GAACNNNNNNTCC	2 cut(s)	1034, 1066
AluBI	AGCT	7 cut(s)	13, 142, 406, 418, 1116, 1366, 2151
AluI	AGCT	7 cut(s)	13, 142, 406, 418, 1116, 1366, 2151
Alw26I	GTCTC	6 cut(s)	298, 555, 1139, 1205, 1635, 1653
AlwI	GGATC	7 cut(s)	383, 394, 533, 712, 1044, 1448, 1541
Ama87I	CYCGRG	1 cut(s)	577
Aor51HI	AGCGCT	2 cut(s)	224, 1518
ArsI	GACNNNNNNTTYG	4 cut(s)	1895, 1927, 1940, 1972
AsiGI	ACCGGT	2 cut(s)	1273, 1331
Asp700I	GAANNNNTTC	3 cut(s)	431, 731, 1147
Asp718I	GGTACC	1 cut(s)	1328
AspA2I	CCTAGG	1 cut(s)	326
AspLEI	GCGC	6 cut(s)	225, 239, 1018, 1079, 1201, 1519
AspS9I	GGNCC	4 cut(s)	109, 330, 479, 1634
AsuC2I	CCSGG	4 cut(s)	333, 553, 589, 1638
AsuII	TTCGAA	1 cut(s)	725
AvaI	CYCGRG	1 cut(s)	577
AvaII	GGWCC	3 cut(s)	109, 479, 1634
AvrII	CCTAGG	1 cut(s)	326
AxyI	CCTNAGG	1 cut(s)	1738
BaeGI	GKGCMC	1 cut(s)	771
BalI	TGGCCA	1 cut(s)	2126
BanI	GGYRCC	3 cut(s)	1097, 1198, 1328
BanII	GRGCYC	3 cut(s)	840, 1776, 1824
BauI	CACGAG	1 cut(s)	839
BbsI	GAAGAC	3 cut(s)	795, 1150, 1815
BccI	CCATC	9 cut(s)	248, 347, 674, 722, 950, 1621, 1667, 1739, 1973
BceAI	ACGGC	6 cut(s)	292, 335, 631, 726, 1090, 1981
BclI	TGATCA	1 cut(s)	2100
BcnI	CCSGG	4 cut(s)	333, 553, 589, 1638
BcoDI	GTCTC	6 cut(s)	298, 555, 1139, 1205, 1635, 1653
BfaI	CTAG	4 cut(s)	95, 132, 327, 2173
BfoI	RGCGCY	3 cut(s)	226, 1202, 1520
BfrI	CTTAAG	1 cut(s)	946
BfuAI	ACCTGC	1 cut(s)	793
BglI	GCCNNNNNGGC	3 cut(s)	1877, 1922, 2123
BlnI	CCTAGG	1 cut(s)	326
BlpI	GCTNAGC	1 cut(s)	2147
Bme1390I	CCNGG	4 cut(s)	333, 553, 589, 1638
Bme18I	GGWCC	3 cut(s)	109, 479, 1634
BmeRI	GACNNNNNGTC	1 cut(s)	619
BmeT110I	CYCGRG	1 cut(s)	577
BmgT120I	GGNCC	4 cut(s)	109, 330, 479, 1634
BmiI	GGNNCC	7 cut(s)	337, 1099, 1200, 1240, 1330, 1636, 1773
BmrFI	CCNGG	4 cut(s)	333, 553, 589, 1638
BmrI	ACTGGG	2 cut(s)	214, 1256
BmuI	ACTGGG	2 cut(s)	214, 1256
BpiI	GAAGAC	3 cut(s)	795, 1150, 1815
BplI	GAGNNNNNCTC	2 cut(s)	822, 854
BpmI	CTGGAG	1 cut(s)	1066
Bpu1102I	GCTNAGC	1 cut(s)	2147
Bpu14I	TTCGAA	1 cut(s)	725
BpuEI	CTTGAG	2 cut(s)	1712, 2173
BpuMI	CCSGG	4 cut(s)	333, 553, 589, 1638
Bsa29I	ATCGAT	1 cut(s)	690
BsaAI	YACGTR	1 cut(s)	289
BsaBI	GATNNNNATC	1 cut(s)	1452
BsaHI	GRCGYC	2 cut(s)	1127, 1199
BsaI	GGTCTC	1 cut(s)	1205
BsaWI	WCCGGW	3 cut(s)	973, 1273, 1331
BsaXI	ACNNNNNCTCC	8 cut(s)	278, 308, 1847, 1877, 1892, 1922, 1937, 1967
Bsc4I	CCNNNNNNNGG	9 cut(s)	205, 226, 332, 594, 1093, 1388, 1499, 1562, 1783
Bse118I	RCCGGY	3 cut(s)	1100, 1273, 1331
Bse1I	ACTGG	3 cut(s)	209, 1049, 1251
Bse21I	CCTNAGG	1 cut(s)	1738
Bse3DI	GCAATG	2 cut(s)	468, 655
Bse8I	GATNNNNATC	1 cut(s)	1452
BseCI	ATCGAT	1 cut(s)	690
BseJI	GATNNNNATC	1 cut(s)	1452
BseLI	CCNNNNNNNGG	9 cut(s)	205, 226, 332, 594, 1093, 1388, 1499, 1562, 1783
BseMI	GCAATG	2 cut(s)	468, 655
BseMII	CTCAG	3 cut(s)	315, 1150, 2138
BseNI	ACTGG	3 cut(s)	209, 1049, 1251
BseRI	GAGGAG	8 cut(s)	23, 1355, 1367, 1784, 1865, 1868, 1913, 1958
BseSI	GKGCMC	1 cut(s)	771
BseX3I	CGGCCG	3 cut(s)	277, 1884, 1929
BseYI	CCCAGC	1 cut(s)	9
Bsh1236I	CGCG	1 cut(s)	1193
Bsh1285I	CGRYCG	3 cut(s)	280, 1887, 1932
BshNI	GGYRCC	3 cut(s)	1097, 1198, 1328
BshTI	ACCGGT	2 cut(s)	1273, 1331
BshVI	ATCGAT	1 cut(s)	690
BsiEI	CGRYCG	3 cut(s)	280, 1887, 1932
BsiHKCI	CYCGRG	1 cut(s)	577
BslFI	GGGAC	5 cut(s)	404, 584, 626, 1309, 1620
BslI	CCNNNNNNNGG	9 cut(s)	205, 226, 332, 594, 1093, 1388, 1499, 1562, 1783
BsmAI	GTCTC	6 cut(s)	298, 555, 1139, 1205, 1635, 1653
BsmBI	CGTCTC	1 cut(s)	1635
BsmFI	GGGAC	5 cut(s)	404, 584, 626, 1309, 1620
BsmI	GAATGC	1 cut(s)	855
Bso31I	GGTCTC	1 cut(s)	1205
BsoBI	CYCGRG	1 cut(s)	577
Bsp119I	TTCGAA	1 cut(s)	725
Bsp1286I	GDGCHC	4 cut(s)	771, 840, 1776, 1824
Bsp143I	GATC	9 cut(s)	91, 375, 399, 525, 704, 1049, 1453, 1546, 2100
Bsp1720I	GCTNAGC	1 cut(s)	2147
Bsp19I	CCATGG	2 cut(s)	520, 2058
BspCNI	CTCAG	3 cut(s)	314, 1149, 2139
BspDI	ATCGAT	1 cut(s)	690
BspFNI	CGCG	1 cut(s)	1193
BspHI	TCATGA	3 cut(s)	423, 735, 745
BspLI	GGNNCC	7 cut(s)	337, 1099, 1200, 1240, 1330, 1636, 1773
BspMI	ACCTGC	1 cut(s)	793
BspPI	GGATC	7 cut(s)	383, 394, 533, 712, 1044, 1448, 1541
BspT104I	TTCGAA	1 cut(s)	725
BspT107I	GGYRCC	3 cut(s)	1097, 1198, 1328
BspTI	CTTAAG	1 cut(s)	946
BspTNI	GGTCTC	1 cut(s)	1205
BsrDI	GCAATG	2 cut(s)	468, 655
BsrFI	RCCGGY	3 cut(s)	1100, 1273, 1331
BsrI	ACTGG	3 cut(s)	209, 1049, 1251
BssAI	RCCGGY	3 cut(s)	1100, 1273, 1331
BssMI	GATC	9 cut(s)	91, 375, 399, 525, 704, 1049, 1453, 1546, 2100
BssNI	GRCGYC	2 cut(s)	1127, 1199
BssSI	CACGAG	1 cut(s)	839
Bst2BI	CACGAG	1 cut(s)	839
Bst6I	CTCTTC	3 cut(s)	1028, 1344, 1704
BstACI	GRCGYC	2 cut(s)	1127, 1199
BstAFI	CTTAAG	1 cut(s)	946
BstAPI	GCANNNNNTGC	1 cut(s)	850
BstBAI	YACGTR	1 cut(s)	289
BstBI	TTCGAA	1 cut(s)	725
BstC8I	GCNNGC	8 cut(s)	144, 188, 221, 549, 800, 1173, 1203, 1394
BstDEI	CTNAG	4 cut(s)	301, 1136, 1738, 2147
BstDSI	CCRYGG	2 cut(s)	520, 2058
BstFNI	CGCG	1 cut(s)	1193
BstH2I	RGCGCY	3 cut(s)	226, 1202, 1520
BstHHI	GCGC	6 cut(s)	225, 239, 1018, 1079, 1201, 1519
BstKTI	GATC	9 cut(s)	94, 378, 402, 528, 707, 1052, 1456, 1549, 2103
BstMAI	GTCTC	6 cut(s)	298, 555, 1139, 1205, 1635, 1653
BstMBI	GATC	9 cut(s)	91, 375, 399, 525, 704, 1049, 1453, 1546, 2100
BstMCI	CGRYCG	3 cut(s)	280, 1887, 1932
BstNSI	RCATGY	1 cut(s)	802
BstSCI	CCNGG	4 cut(s)	331, 551, 587, 1636
BstSLI	GKGCMC	1 cut(s)	771
BstSNI	TACGTA	1 cut(s)	289
BstUI	CGCG	1 cut(s)	1193
BstV2I	GAAGAC	3 cut(s)	795, 1150, 1815
BstX2I	RGATCY	3 cut(s)	1049, 1453, 1546
BstYI	RGATCY	3 cut(s)	1049, 1453, 1546
BstZI	CGGCCG	3 cut(s)	277, 1884, 1929
Bsu15I	ATCGAT	1 cut(s)	690
Bsu36I	CCTNAGG	1 cut(s)	1738
BsuTUI	ATCGAT	1 cut(s)	690
BtgI	CCRYGG	2 cut(s)	520, 2058
BtsIMutI	CAGTG	7 cut(s)	368, 662, 778, 807, 1144, 1244, 2166
BveI	ACCTGC	1 cut(s)	793
Cac8I	GCNNGC	8 cut(s)	144, 188, 221, 549, 800, 1173, 1203, 1394
CciI	TCATGA	3 cut(s)	423, 735, 745
CfoI	GCGC	6 cut(s)	225, 239, 1018, 1079, 1201, 1519
Cfr10I	RCCGGY	3 cut(s)	1100, 1273, 1331
Cfr13I	GGNCC	4 cut(s)	109, 330, 479, 1634
ClaI	ATCGAT	1 cut(s)	690
CseI	GACGC	6 cut(s)	117, 266, 607, 748, 1116, 1652
Csp6I	GTAC	2 cut(s)	101, 1329
CspAI	ACCGGT	2 cut(s)	1273, 1331
CviQI	GTAC	2 cut(s)	101, 1329
DdeI	CTNAG	4 cut(s)	301, 1136, 1738, 2147
DinI	GGCGCC	1 cut(s)	1200
DpnI	GATC	9 cut(s)	93, 377, 401, 527, 706, 1051, 1455, 1548, 2102
DpnII	GATC	9 cut(s)	91, 375, 399, 525, 704, 1049, 1453, 1546, 2100
DraIII	CACNNNGTG	1 cut(s)	352
DriI	GACNNNNNGTC	1 cut(s)	619
EaeI	YGGCCR	6 cut(s)	228, 277, 711, 1884, 1929, 2124
EagI	CGGCCG	3 cut(s)	277, 1884, 1929
Eam1104I	CTCTTC	3 cut(s)	1028, 1344, 1704
Eam1105I	GACNNNNNGTC	1 cut(s)	619
EarI	CTCTTC	3 cut(s)	1028, 1344, 1704
EciI	GGCGGA	3 cut(s)	1569, 1584, 2044
EclXI	CGGCCG	3 cut(s)	277, 1884, 1929
Eco105I	TACGTA	1 cut(s)	289
Eco147I	AGGCCT	1 cut(s)	2033
Eco24I	GRGCYC	3 cut(s)	840, 1776, 1824
Eco31I	GGTCTC	1 cut(s)	1205
Eco47I	GGWCC	3 cut(s)	109, 479, 1634
Eco47III	AGCGCT	2 cut(s)	224, 1518
Eco52I	CGGCCG	3 cut(s)	277, 1884, 1929
Eco57I	CTGAAG	2 cut(s)	428, 1428
Eco81I	CCTNAGG	1 cut(s)	1738
Eco88I	CYCGRG	1 cut(s)	577
EcoO109I	RGGNCCY	1 cut(s)	1634
EcoT22I	ATGCAT	1 cut(s)	488
EcoT38I	GRGCYC	3 cut(s)	840, 1776, 1824
EgeI	GGCGCC	1 cut(s)	1200
EheI	GGCGCC	1 cut(s)	1200
Esp3I	CGTCTC	1 cut(s)	1635
FalI	AAGNNNNNCTT	2 cut(s)	1135, 1167
FaqI	GGGAC	5 cut(s)	404, 584, 626, 1309, 1620
FauI	CCCGC	2 cut(s)	260, 1720
FbaI	TGATCA	1 cut(s)	2100
FblI	GTMKAC	1 cut(s)	862
FriOI	GRGCYC	3 cut(s)	840, 1776, 1824
FspBI	CTAG	4 cut(s)	95, 132, 327, 2173
GlaI	GCGC	6 cut(s)	224, 238, 1017, 1078, 1200, 1518
GsaI	CCCAGC	1 cut(s)	13
GsuI	CTGGAG	1 cut(s)	1066
HaeII	RGCGCY	3 cut(s)	226, 1202, 1520
HgaI	GACGC	6 cut(s)	117, 266, 607, 748, 1116, 1652
HhaI	GCGC	6 cut(s)	225, 239, 1018, 1079, 1201, 1519
Hin1I	GRCGYC	2 cut(s)	1127, 1199
Hin6I	GCGC	6 cut(s)	223, 237, 1016, 1077, 1199, 1517
HinP1I	GCGC	6 cut(s)	223, 237, 1016, 1077, 1199, 1517
HincII	GTYRAC	1 cut(s)	652
HindII	GTYRAC	1 cut(s)	652
Hpy166II	GTNNAC	8 cut(s)	112, 322, 466, 597, 652, 783, 863, 886
Hpy8I	GTNNAC	8 cut(s)	112, 322, 466, 597, 652, 783, 863, 886
HpyAV	CCTTC	5 cut(s)	827, 1158, 1625, 1649, 1834
HpyCH4IV	ACGT	1 cut(s)	288
HpyCH4V	TGCA	8 cut(s)	53, 486, 802, 844, 917, 971, 1106, 1313
HpyF3I	CTNAG	4 cut(s)	301, 1136, 1738, 2147
HpySE526I	ACGT	1 cut(s)	288
Hsp92I	GRCGYC	2 cut(s)	1127, 1199
HspAI	GCGC	6 cut(s)	223, 237, 1016, 1077, 1199, 1517
KasI	GGCGCC	1 cut(s)	1198
KpnI	GGTACC	1 cut(s)	1332
Ksp22I	TGATCA	1 cut(s)	2100
Kzo9I	GATC	9 cut(s)	91, 375, 399, 525, 704, 1049, 1453, 1546, 2100
LmnI	GCTCC	4 cut(s)	77, 1238, 1363, 1771
MaeI	CTAG	4 cut(s)	95, 132, 327, 2173
MaeII	ACGT	1 cut(s)	288
MaeIII	GTNAC	7 cut(s)	502, 674, 805, 997, 1469, 1793, 2048
MalI	GATC	9 cut(s)	93, 377, 401, 527, 706, 1051, 1455, 1548, 2102
MboI	GATC	9 cut(s)	91, 375, 399, 525, 704, 1049, 1453, 1546, 2100
MfeI	CAATTG	1 cut(s)	261
MflI	RGATCY	3 cut(s)	1049, 1453, 1546
MhlI	GDGCHC	4 cut(s)	771, 840, 1776, 1824
MlsI	TGGCCA	1 cut(s)	2126
MluCI	AATT	2 cut(s)	261, 670
MluNI	TGGCCA	1 cut(s)	2126
Mly113I	GGCGCC	1 cut(s)	1199
MmeI	TCCRAC	7 cut(s)	321, 367, 630, 1341, 1605, 1641, 1764
Mox20I	TGGCCA	1 cut(s)	2126
Mph1103I	ATGCAT	1 cut(s)	488
MroXI	GAANNNNTTC	3 cut(s)	431, 731, 1147
MscI	TGGCCA	1 cut(s)	2126
MseI	TTAA	3 cut(s)	819, 947, 1158
MslI	CAYNNNNRTG	1 cut(s)	1011
Msp20I	TGGCCA	1 cut(s)	2126
MspA1I	CMGCKG	5 cut(s)	142, 406, 1205, 1585, 1603
MspCI	CTTAAG	1 cut(s)	946
MspR9I	CCNGG	4 cut(s)	333, 553, 589, 1638
MunI	CAATTG	1 cut(s)	261
Mva1269I	GAATGC	1 cut(s)	855
MvnI	CGCG	1 cut(s)	1193
NarI	GGCGCC	1 cut(s)	1199
NciI	CCSGG	4 cut(s)	333, 553, 589, 1638
NcoI	CCATGG	2 cut(s)	520, 2058
NdeII	GATC	9 cut(s)	91, 375, 399, 525, 704, 1049, 1453, 1546, 2100
NlaIV	GGNNCC	7 cut(s)	337, 1099, 1200, 1240, 1330, 1636, 1773
NmuCI	GTSAC	7 cut(s)	502, 674, 805, 997, 1469, 1793, 2048
NsiI	ATGCAT	1 cut(s)	488
NspI	RCATGY	1 cut(s)	802
NspV	TTCGAA	1 cut(s)	725
PaeI	GCATGC	1 cut(s)	802
PagI	TCATGA	3 cut(s)	423, 735, 745
PceI	AGGCCT	1 cut(s)	2033
PcsI	WCGNNNNNNNCGW	3 cut(s)	294, 615, 716
PctI	GAATGC	1 cut(s)	855
PdmI	GAANNNNTTC	3 cut(s)	431, 731, 1147
PfeI	GAWTC	5 cut(s)	282, 776, 1265, 1439, 2022
PflFI	GACNNNGTC	1 cut(s)	601
PflMI	CCANNNNNTGG	1 cut(s)	226
PfoI	TCCNGGA	1 cut(s)	1636
PinAI	ACCGGT	2 cut(s)	1273, 1331
PluTI	GGCGCC	1 cut(s)	1202
Ppu21I	YACGTR	1 cut(s)	289
PpuMI	RGGWCCY	1 cut(s)	1634
Psp5II	RGGWCCY	1 cut(s)	1634
PspFI	CCCAGC	1 cut(s)	9
PspN4I	GGNNCC	7 cut(s)	337, 1099, 1200, 1240, 1330, 1636, 1773
PspPI	GGNCC	4 cut(s)	109, 330, 479, 1634
PspPPI	RGGWCCY	1 cut(s)	1634
PsuI	RGATCY	3 cut(s)	1049, 1453, 1546
PsyI	GACNNNGTC	1 cut(s)	601
PvuII	CAGCTG	2 cut(s)	142, 406
RsaI	GTAC	2 cut(s)	102, 1330
RsaNI	GTAC	2 cut(s)	101, 1329
RseI	CAYNNNNRTG	1 cut(s)	1011
SaqAI	TTAA	3 cut(s)	819, 947, 1158
Sau3AI	GATC	9 cut(s)	91, 375, 399, 525, 704, 1049, 1453, 1546, 2100
Sau96I	GGNCC	4 cut(s)	109, 330, 479, 1634
ScrFI	CCNGG	4 cut(s)	333, 553, 589, 1638
SduI	GDGCHC	4 cut(s)	771, 840, 1776, 1824
SfoI	GGCGCC	1 cut(s)	1200
SfuI	TTCGAA	1 cut(s)	725
SinI	GGWCC	3 cut(s)	109, 479, 1634
SmiMI	CAYNNNNRTG	1 cut(s)	1011
SmlI	CTYRAG	3 cut(s)	946, 1691, 2152
SmoI	CTYRAG	3 cut(s)	946, 1691, 2152
SnaBI	TACGTA	1 cut(s)	289
SphI	GCATGC	1 cut(s)	802
Sse9I	AATT	2 cut(s)	261, 670
SseBI	AGGCCT	1 cut(s)	2033
SspDI	GGCGCC	1 cut(s)	1198
SspMI	CTAG	4 cut(s)	95, 132, 327, 2173
StuI	AGGCCT	1 cut(s)	2033
StyD4I	CCNGG	4 cut(s)	331, 551, 587, 1636
TaiI	ACGT	1 cut(s)	291
TaqI	TCGA	6 cut(s)	623, 690, 707, 725, 987, 1130
TasI	AATT	2 cut(s)	261, 670
TatI	WGTACW	1 cut(s)	100
TfiI	GAWTC	5 cut(s)	282, 776, 1265, 1439, 2022
Tru1I	TTAA	3 cut(s)	819, 947, 1158
Tru9I	TTAA	3 cut(s)	819, 947, 1158
TscAI	CASTG	7 cut(s)	375, 669, 778, 814, 1144, 1251, 2166
TseFI	GTSAC	7 cut(s)	502, 674, 805, 997, 1469, 1793, 2048
Tsp45I	GTSAC	7 cut(s)	502, 674, 805, 997, 1469, 1793, 2048
TspDTI	ATGAA	9 cut(s)	440, 724, 866, 1428, 1434, 1452, 1464, 1644, 1821
TspGWI	ACGGA	3 cut(s)	573, 800, 1996
TspRI	CASTG	7 cut(s)	375, 669, 778, 814, 1144, 1251, 2166
Tth111I	GACNNNGTC	1 cut(s)	601
Van91I	CCANNNNNTGG	1 cut(s)	226
Vha464I	CTTAAG	1 cut(s)	946
VpaK11BI	GGWCC	3 cut(s)	109, 479, 1634
XceI	RCATGY	1 cut(s)	802
XmaJI	CCTAGG	1 cut(s)	326
XmiI	GTMKAC	1 cut(s)	862
XmnI	GAANNNNTTC	3 cut(s)	431, 731, 1147
XspI	CTAG	4 cut(s)	95, 132, 327, 2173
Zsp2I	ATGCAT	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.