pycom05g00160

Belongs to the glycosyltransferase 1 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
181645 .. 183419
1775 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g00160.1

Sequence Viewer

Length: 1182 bp
ATGTCAAATAGTAGCTCGGTTGTTCTTACAACTGTACTCAGGCTCATTGACAAGTATGATCTGTATGGGCAAGTGGCCTATCCTAAGCATCACAAGCAATTAGATGTGCCAGACATTTATCGTCTAGCTGCAAAAACAAAGGGAGTTTTCATCAACCCAGCTCTCGTGGAACCCTTCGGGCTCACAATTATAGAGGCAGCTGCTTATGGTTTACCGGTGGTCGCCACCAAAAATGGAGGGCCTGTGGATATTCTGAAGGCACTAAACAACGGCCTCCTAGTTGACCCACATGACCAGAAAGCCATAGAAGAGGCACTGCTCAAACTTGTCGGAGAAAAAAACCTCTGGCTTGAATGCAGAAATAACGGCCTGAAGAACATCCACCGCTTTTCGTGGCCAGAACACTGCCAAAACTACCTCTCCCCTGTTGAACATTCCAGAAACCGTCACCGCACTACCCGTCTTCAGATCACGCCAATTCCTGAAGAGCCATTGAATGAGTCTCTAAAAGATGTGGAAGACCTTTCTTTGAGATTCTCTGTGGAAGGAGACTTCAAGCATAATGGAGAGCTCGATGCAGCAACTAGACAGAGGGAACTGATTGAAGCCATAACTAGAATGTCGTCGTCCACTAGCAATGTAGGTGCTACTTATGGTCCTGGCAGAAGGCAGAGTCTATTTGTAATTGCCATCGACTGTTATGACCAGAATGGAGACGGCACCCAGGTATTTCAAGAAATTCTAGTGAATGTAAAGAAAGCAGCAGGTTTAGGCTATGGCCAGGGTCGAGTAGGCATTGTGTTGTTAACTGGTTCCAGCTTACAAGATATCATGAAAGAGTTTAAAGGGTGCCAAGTAAACATAGAAGATTTTGACGCGTTGGTCTGCAAAAGTGGGAGTGAAATGTACTACCCGTGGAGGGATCTAGCAGCTGATGCAGATTATGAAACCCATATCGAGTACAGATGGCCTGGGGAGAATGTGAGGTCCATGGTTCCAAGGCTAGCCAGGCTAGAAGTTGGAGCTGAGGATGATGTCGTGGAGTATGCCAGATCAAGTAGCTCGAGGTGCTACTCTTATAGTGTGAAACCAGGAGCCAAGACTCGATGGGTTGACGACCTGCGCCAATTGCTGCGGATGAGGGGCTTCCGATGCAACCTTGTCTACACTCGTGTAGCTTAA

Protein Analysis

394

Amino Acids

44.17

Weight (kDa)

6.53

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_transf_1 PF00534 14 - 123 6.1e-19 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 48 - 110 9.5e-14 Glycosyl transferases group 1
S6PP PF05116 262 - 390 9.8e-10 Sucrose-6F-phosphate phosphohydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 881
Acc36I ACCTGC 2 cut(s) 755, 1128
AccB1I GGYRCC 2 cut(s) 719, 849
AccI GTMKAC 1 cut(s) 1164
AccII CGCG 1 cut(s) 878
AciI CCGC 3 cut(s) 385, 451, 1135
AclWI GGATC 1 cut(s) 930
AcoI YGGCCR 2 cut(s) 395, 778
AcsI RAATTY 1 cut(s) 738
AcuI CTGAAG 4 cut(s) 275, 392, 449, 504
AfaI GTAC 3 cut(s) 36, 908, 962
AfiI CCNNNNNNNGG 1 cut(s) 919
AflIII ACRYGT 1 cut(s) 876
AgeI ACCGGT 1 cut(s) 214
AgsI TTSAA 6 cut(s) 353, 431, 496, 556, 605, 734
AjnI CCWGG 6 cut(s) 658, 723, 780, 970, 1007, 1090
Alw21I GWGCWC 1 cut(s) 573
Alw26I GTCTC 3 cut(s) 507, 543, 708
AlwI GGATC 1 cut(s) 930
Ama87I CYCGRG 1 cut(s) 1063
AoxI GGCC 7 cut(s) 75, 239, 271, 367, 395, 778, 968
ApeKI GCWGC 7 cut(s) 128, 197, 200, 578, 761, 929, 1132
ApoI RAATTY 1 cut(s) 738
AsiGI ACCGGT 1 cut(s) 214
AspLEI GCGC 1 cut(s) 1125
AspS9I GGNCC 3 cut(s) 239, 656, 987
AsuHPI GGTGA 1 cut(s) 440
AsuNHI GCTAGC 1 cut(s) 1003
AvaI CYCGRG 1 cut(s) 1063
AvaII GGWCC 2 cut(s) 656, 987
BalI TGGCCA 2 cut(s) 397, 780
BanI GGYRCC 2 cut(s) 719, 849
BanII GRGCYC 2 cut(s) 183, 573
BauI CACGAG 2 cut(s) 164, 1170
BbsI GAAGAC 2 cut(s) 455, 525
Bbv12I GWGCWC 1 cut(s) 573
BbvCI CCTCAGC 1 cut(s) 1026
BbvI GCAGC 7 cut(s) 115, 187, 209, 590, 773, 941, 1119
BccI CCATC 3 cut(s) 698, 960, 1101
BceAI ACGGC 3 cut(s) 286, 382, 733
BciT130I CCWGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
BcoDI GTCTC 3 cut(s) 507, 543, 708
BfaI CTAG 9 cut(s) 125, 278, 585, 615, 633, 743, 926, 1004, 1013
BfuAI ACCTGC 2 cut(s) 755, 1128
BisI GCNGC 7 cut(s) 129, 198, 201, 579, 762, 930, 1133
BlsI GCNGC 7 cut(s) 130, 199, 202, 580, 763, 931, 1134
Bme1390I CCNGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
Bme18I GGWCC 2 cut(s) 656, 987
BmeT110I CYCGRG 1 cut(s) 1063
BmgT120I GGNCC 3 cut(s) 239, 656, 987
BmiI GGNNCC 6 cut(s) 171, 721, 814, 851, 996, 1096
BmrFI CCNGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
BmsI GCATC 4 cut(s) 97, 565, 925, 1142
BmtI GCTAGC 1 cut(s) 1007
BpiI GAAGAC 2 cut(s) 455, 525
Bpu10I CCTNAGC 2 cut(s) 84, 1026
BsaJI CCNNGG 6 cut(s) 723, 781, 914, 971, 990, 998
BsaWI WCCGGW 1 cut(s) 214
BsaXI ACNNNNNCTCC 4 cut(s) 228, 258, 404, 434
Bsc4I CCNNNNNNNGG 1 cut(s) 919
Bse118I RCCGGY 1 cut(s) 214
Bse1I ACTGG 1 cut(s) 814
Bse3DI GCAATG 1 cut(s) 643
BseBI CCWGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
BseDI CCNNGG 6 cut(s) 723, 781, 914, 971, 990, 998
BseGI GGATG 3 cut(s) 378, 1036, 1143
BseLI CCNNNNNNNGG 1 cut(s) 919
BseMI GCAATG 1 cut(s) 643
BseMII CTCAG 2 cut(s) 52, 1017
BseNI ACTGG 1 cut(s) 814
BseXI GCAGC 7 cut(s) 115, 187, 209, 590, 773, 941, 1119
BseYI CCCAGC 1 cut(s) 157
Bsh1236I CGCG 1 cut(s) 878
BshFI GGCC 7 cut(s) 77, 241, 273, 369, 397, 780, 970
BshNI GGYRCC 2 cut(s) 719, 849
BshTI ACCGGT 1 cut(s) 214
BsiHKAI GWGCWC 1 cut(s) 573
BsiHKCI CYCGRG 1 cut(s) 1063
BsiSI CCGG 1 cut(s) 215
BslI CCNNNNNNNGG 1 cut(s) 919
BsmAI GTCTC 3 cut(s) 507, 543, 708
BsmBI CGTCTC 1 cut(s) 708
BsmI GAATGC 1 cut(s) 359
BsnI GGCC 7 cut(s) 77, 241, 273, 369, 397, 780, 970
BsoBI CYCGRG 1 cut(s) 1063
Bsp1286I GDGCHC 2 cut(s) 183, 573
Bsp143I GATC 4 cut(s) 58, 468, 922, 1052
Bsp19I CCATGG 1 cut(s) 990
BspACI CCGC 3 cut(s) 385, 451, 1135
BspANI GGCC 7 cut(s) 77, 241, 273, 369, 397, 780, 970
BspCNI CTCAG 2 cut(s) 51, 1018
BspFNI CGCG 1 cut(s) 878
BspHI TCATGA 1 cut(s) 831
BspLI GGNNCC 6 cut(s) 171, 721, 814, 851, 996, 1096
BspMI ACCTGC 2 cut(s) 755, 1128
BspOI GCTAGC 1 cut(s) 1007
BspPI GGATC 1 cut(s) 930
BspQI GCTCTTC 1 cut(s) 480
BspT107I GGYRCC 2 cut(s) 719, 849
BsrDI GCAATG 1 cut(s) 643
BsrFI RCCGGY 1 cut(s) 214
BsrI ACTGG 1 cut(s) 814
BssAI RCCGGY 1 cut(s) 214
BssECI CCNNGG 6 cut(s) 723, 781, 914, 971, 990, 998
BssMI GATC 4 cut(s) 58, 468, 922, 1052
BssSI CACGAG 2 cut(s) 164, 1170
BssT1I CCWWGG 2 cut(s) 990, 998
Bst2BI CACGAG 2 cut(s) 164, 1170
Bst2UI CCWGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
Bst4CI ACNGT 3 cut(s) 34, 446, 698
Bst6I CTCTTC 2 cut(s) 303, 480
BstAPI GCANNNNNTGC 1 cut(s) 935
BstC8I GCNNGC 1 cut(s) 1005
BstDEI CTNAG 3 cut(s) 38, 84, 1026
BstDSI CCRYGG 2 cut(s) 914, 990
BstF5I GGATG 3 cut(s) 378, 1036, 1143
BstFNI CGCG 1 cut(s) 878
BstHHI GCGC 1 cut(s) 1125
BstKTI GATC 4 cut(s) 61, 471, 925, 1055
BstMAI GTCTC 3 cut(s) 507, 543, 708
BstMBI GATC 4 cut(s) 58, 468, 922, 1052
BstMWI GCNNNNNNNGC 6 cut(s) 94, 935, 1009, 1068, 1129, 1152
BstNI CCWGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
BstSCI CCNGG 6 cut(s) 658, 723, 780, 970, 1007, 1090
BstUI CGCG 1 cut(s) 878
BstV1I GCAGC 7 cut(s) 115, 187, 209, 590, 773, 941, 1119
BstV2I GAAGAC 2 cut(s) 455, 525
BstX2I RGATCY 1 cut(s) 922
BstYI RGATCY 1 cut(s) 922
BsuRI GGCC 7 cut(s) 77, 241, 273, 369, 397, 780, 970
BtgI CCRYGG 2 cut(s) 914, 990
BtsCI GGATG 3 cut(s) 378, 1036, 1143
BtsI GCAGTG 2 cut(s) 314, 403
BtsIMutI CAGTG 2 cut(s) 314, 403
BveI ACCTGC 2 cut(s) 755, 1128
Cac8I GCNNGC 1 cut(s) 1005
CciI TCATGA 1 cut(s) 831
CfoI GCGC 1 cut(s) 1125
Cfr10I RCCGGY 1 cut(s) 214
Cfr13I GGNCC 3 cut(s) 239, 656, 987
CseI GACGC 1 cut(s) 884
Csp6I GTAC 3 cut(s) 35, 907, 961
CspAI ACCGGT 1 cut(s) 214
CviAII CATG 3 cut(s) 290, 832, 991
CviQI GTAC 3 cut(s) 35, 907, 961
DdeI CTNAG 3 cut(s) 38, 84, 1026
DpnI GATC 4 cut(s) 60, 470, 924, 1054
DpnII GATC 4 cut(s) 58, 468, 922, 1052
DraI TTTAAA 1 cut(s) 844
DrdI GACNNNNNNGTC 1 cut(s) 881
DseDI GACNNNNNNGTC 1 cut(s) 881
EaeI YGGCCR 2 cut(s) 395, 778
Eam1104I CTCTTC 2 cut(s) 303, 480
EarI CTCTTC 2 cut(s) 303, 480
Ecl136II GAGCTC 1 cut(s) 571
Eco130I CCWWGG 2 cut(s) 990, 998
Eco24I GRGCYC 2 cut(s) 183, 573
Eco32I GATATC 1 cut(s) 829
Eco47I GGWCC 2 cut(s) 656, 987
Eco53kI GAGCTC 1 cut(s) 571
Eco57I CTGAAG 4 cut(s) 275, 392, 449, 504
Eco88I CYCGRG 1 cut(s) 1063
EcoICRI GAGCTC 1 cut(s) 571
EcoO109I RGGNCCY 1 cut(s) 239
EcoRII CCWGG 6 cut(s) 658, 723, 780, 970, 1007, 1090
EcoRV GATATC 1 cut(s) 829
EcoT14I CCWWGG 2 cut(s) 990, 998
EcoT38I GRGCYC 2 cut(s) 183, 573
ErhI CCWWGG 2 cut(s) 990, 998
Esp3I CGTCTC 1 cut(s) 708
FaeI CATG 3 cut(s) 293, 835, 994
FatI CATG 3 cut(s) 289, 831, 990
FblI GTMKAC 1 cut(s) 1164
Fnu4HI GCNGC 7 cut(s) 129, 198, 201, 579, 762, 930, 1133
FokI GGATG 3 cut(s) 365, 1043, 1150
FriOI GRGCYC 2 cut(s) 183, 573
Fsp4HI GCNGC 7 cut(s) 129, 198, 201, 579, 762, 930, 1133
FspBI CTAG 9 cut(s) 125, 278, 585, 615, 633, 743, 926, 1004, 1013
GlaI GCGC 1 cut(s) 1124
GluI GCNGC 7 cut(s) 129, 198, 201, 579, 762, 930, 1133
GsaI CCCAGC 1 cut(s) 161
HaeIII GGCC 7 cut(s) 77, 241, 273, 369, 397, 780, 970
HapII CCGG 1 cut(s) 215
HgaI GACGC 1 cut(s) 884
HhaI GCGC 1 cut(s) 1125
Hin1II CATG 3 cut(s) 293, 835, 994
Hin6I GCGC 1 cut(s) 1123
HinP1I GCGC 1 cut(s) 1123
HincII GTYRAC 3 cut(s) 283, 807, 1114
HindII GTYRAC 3 cut(s) 283, 807, 1114
HinfI GANTC 4 cut(s) 500, 534, 673, 1102
HpaI GTTAAC 1 cut(s) 807
HpaII CCGG 1 cut(s) 215
HphI GGTGA 1 cut(s) 440
Hpy166II GTNNAC 7 cut(s) 212, 283, 630, 807, 859, 1114, 1165
Hpy188I TCNGA 4 cut(s) 255, 332, 468, 1151
Hpy188III TCNNGA 4 cut(s) 438, 482, 734, 832
Hpy8I GTNNAC 7 cut(s) 212, 283, 630, 807, 859, 1114, 1165
Hpy99I CGWCG 1 cut(s) 628
HpyAV CCTTC 4 cut(s) 184, 250, 539, 660
HpyCH4III ACNGT 3 cut(s) 34, 446, 698
HpyCH4V TGCA 6 cut(s) 131, 357, 578, 888, 938, 1155
HpyF10VI GCNNNNNNNGC 6 cut(s) 94, 935, 1009, 1068, 1129, 1152
HpyF3I CTNAG 3 cut(s) 38, 84, 1026
Hsp92II CATG 3 cut(s) 293, 835, 994
HspAI GCGC 1 cut(s) 1123
KspAI GTTAAC 1 cut(s) 807
Kzo9I GATC 4 cut(s) 58, 468, 922, 1052
LguI GCTCTTC 1 cut(s) 480
LmnI GCTCC 2 cut(s) 1022, 1094
Lsp1109I GCAGC 7 cut(s) 115, 187, 209, 590, 773, 941, 1119
LweI GCATC 4 cut(s) 97, 565, 925, 1142
MaeI CTAG 9 cut(s) 125, 278, 585, 615, 633, 743, 926, 1004, 1013
MaeIII GTNAC 1 cut(s) 446
MalI GATC 4 cut(s) 60, 470, 924, 1054
MboI GATC 4 cut(s) 58, 468, 922, 1052
MboII GAAGA 6 cut(s) 320, 385, 455, 497, 530, 878
MfeI CAATTG 1 cut(s) 1127
MflI RGATCY 1 cut(s) 922
MhlI GDGCHC 2 cut(s) 183, 573
MlsI TGGCCA 2 cut(s) 397, 780
MluCI AATT 6 cut(s) 98, 186, 477, 684, 738, 1127
MluI ACGCGT 1 cut(s) 876
MluNI TGGCCA 2 cut(s) 397, 780
MlyI GAGTC 3 cut(s) 509, 682, 1096
MmeI TCCRAC 2 cut(s) 310, 1000
Mox20I TGGCCA 2 cut(s) 397, 780
MscI TGGCCA 2 cut(s) 397, 780
MseI TTAA 3 cut(s) 806, 843, 1180
Msp20I TGGCCA 2 cut(s) 397, 780
MspA1I CMGCKG 2 cut(s) 200, 932
MspI CCGG 1 cut(s) 215
MspR9I CCNGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
MunI CAATTG 1 cut(s) 1127
Mva1269I GAATGC 1 cut(s) 359
MvaI CCWGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
MvnI CGCG 1 cut(s) 878
MwoI GCNNNNNNNGC 6 cut(s) 94, 935, 1009, 1068, 1129, 1152
NcoI CCATGG 1 cut(s) 990
NdeII GATC 4 cut(s) 58, 468, 922, 1052
NheI GCTAGC 1 cut(s) 1003
NlaIII CATG 3 cut(s) 293, 835, 994
NlaIV GGNNCC 6 cut(s) 171, 721, 814, 851, 996, 1096
NmuCI GTSAC 1 cut(s) 446
PaeR7I CTCGAG 1 cut(s) 1063
PagI TCATGA 1 cut(s) 831
PciSI GCTCTTC 1 cut(s) 480
PctI GAATGC 1 cut(s) 359
PfeI GAWTC 1 cut(s) 534
PinAI ACCGGT 1 cut(s) 214
PkrI GCNGC 7 cut(s) 130, 199, 202, 580, 763, 931, 1134
PleI GAGTC 3 cut(s) 508, 681, 1096
PpsI GAGTC 3 cut(s) 508, 681, 1096
Psp124BI GAGCTC 1 cut(s) 573
Psp6I CCWGG 6 cut(s) 658, 723, 780, 970, 1007, 1090
PspFI CCCAGC 1 cut(s) 157
PspGI CCWGG 6 cut(s) 658, 723, 780, 970, 1007, 1090
PspN4I GGNNCC 6 cut(s) 171, 721, 814, 851, 996, 1096
PspPI GGNCC 3 cut(s) 239, 656, 987
PspXI VCTCGAGB 1 cut(s) 1063
PsuI RGATCY 1 cut(s) 922
PvuII CAGCTG 2 cut(s) 200, 932
RsaI GTAC 3 cut(s) 36, 908, 962
RsaNI GTAC 3 cut(s) 35, 907, 961
SacI GAGCTC 1 cut(s) 573
SapI GCTCTTC 1 cut(s) 480
SaqAI TTAA 3 cut(s) 806, 843, 1180
SatI GCNGC 7 cut(s) 129, 198, 201, 579, 762, 930, 1133
Sau3AI GATC 4 cut(s) 58, 468, 922, 1052
Sau96I GGNCC 3 cut(s) 239, 656, 987
SchI GAGTC 3 cut(s) 509, 682, 1096
ScrFI CCNGG 6 cut(s) 660, 725, 782, 972, 1009, 1092
SduI GDGCHC 2 cut(s) 183, 573
SfaNI GCATC 4 cut(s) 97, 565, 925, 1142
Sfr274I CTCGAG 1 cut(s) 1063
SinI GGWCC 2 cut(s) 656, 987
SlaI CTCGAG 1 cut(s) 1063
SmlI CTYRAG 1 cut(s) 1063
SmoI CTYRAG 1 cut(s) 1063
Sse9I AATT 6 cut(s) 98, 186, 477, 684, 738, 1127
SsiI CCGC 3 cut(s) 385, 451, 1135
SspMI CTAG 9 cut(s) 125, 278, 585, 615, 633, 743, 926, 1004, 1013
SstI GAGCTC 1 cut(s) 573
StyD4I CCNGG 6 cut(s) 658, 723, 780, 970, 1007, 1090
StyI CCWWGG 2 cut(s) 990, 998
TaaI ACNGT 3 cut(s) 34, 446, 698
TaqI TCGA 6 cut(s) 573, 693, 787, 957, 1064, 1105
TasI AATT 6 cut(s) 98, 186, 477, 684, 738, 1127
TatI WGTACW 3 cut(s) 34, 906, 960
TfiI GAWTC 1 cut(s) 534
Tru1I TTAA 3 cut(s) 806, 843, 1180
Tru9I TTAA 3 cut(s) 806, 843, 1180
TscAI CASTG 2 cut(s) 321, 410
TseFI GTSAC 1 cut(s) 446
TseI GCWGC 7 cut(s) 128, 197, 200, 578, 761, 929, 1132
Tsp45I GTSAC 1 cut(s) 446
TspDTI ATGAA 3 cut(s) 139, 848, 960
TspRI CASTG 2 cut(s) 321, 410
VpaK11BI GGWCC 2 cut(s) 656, 987
XapI RAATTY 1 cut(s) 738
XhoI CTCGAG 1 cut(s) 1063
XmiI GTMKAC 1 cut(s) 1164
XspI CTAG 9 cut(s) 125, 278, 585, 615, 633, 743, 926, 1004, 1013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.