Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001144

Physical Location & Seq

Genomic Coordinates Forward (+)

67678067 .. 67684658

Gene Structure 6592 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0494200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGCATCGGTGCATAGTGCCTTGACATCAGTTGTTTGCAAGAATGGCAATCATTCTTCCCCTGCAAAGTTCCCGAGTACTCCCTTCTTGTCTGGGTTTGATGCTGTGGGGCGTCTTTCAAGCCCATTTAAGAAGGAGATATGTCTGAGTTCCATCAGCTCAGGTCCTAAGGCCACTTTAACTTTTGATCCTCCAGCAACCAATTCAGAGAAAGCCAAGGTACCCAACCTACCGAGGCATACAATCGATCCTGCTTCTCCTGATTTCCTGCCTCTTCCATCCTTCGAACAGTGTTTTCCAAAGAGCACAAAAGAACAAAGGGAAGTTATTCATGAAGAAACTGGTCATGTGCTCAAAGTTCCCTTTCGACGAGTTCACCTGTCTGGAGATGAACCAGCCTTTGATAACTATGACACCAGTGGTCCGCAAAACATTAACCCACGTGTTGGGCTCCCTCAACTAAGGAAAGATTGGGTTGACAGGCGAGAGAAATTAGGTACACCAAGATACACTCAGATGTACTATGCTAAACAGGGAATTATCACTGAGGAAATGTTGTACTGTGCCACCCGTGAGAAGCTTGATCCAGAGTTTGTGAGATCTGAAGTGGCTCGTGGGAGGGCAATTATCCCTTCCAATAAGAAGCACTTGGAGCTTGAGCCAATGATTGTTGGGAGAAAGTTTCTGGTCAAAGTTAATGCAAATATAGGAAACTCTGCTGTTGCCAGCTCTATCGAAGAGGAAGTTTATAAGGTCCAATGGGCAACTATGTGGGGTGCTGACACTGTTATGGACCTCTCTACAGGTCGCCATATCCATGAGACCCGTGAGTGGATCCTACGTAACTCTGCTGTACCAGTAGGGACTGTACCCATCTATCAAGCACTTGAAAAGGTAGATGGAATCGCAGAAAATCTTAACTGGGAAGTGTTCAGACAAACTCTGATTGAACAAGCTGAGCAGGGTGTAGATTACTTCACCATCCATGCTGGGGTTCTACTACGGTACATCCCACTAACAGCAAAGCGTATGACAGGAATTGTCTCTCGAGGAGGATCCATTCATGCAAAGTGGTGCTTAGCTTATCATAAAGAGAATTTTGCTTATGAGCACTGGGATGACATACTTGACATCTGTAATCAATATGATGTTGCCCTGTCAATAGGTGATGGCTTGAGACCCGGTTCCATTTATGATGCCAATGATACTGCACAGTTCGCGGAGCTCTTAACTCAGGGAGAACTGACCCGTAGGGCATGGGAAAAGGATGTGCAGGTAATGAATGAAGGACCTGGACATGTTCCAATGCACAAGATTCCTGAGAACATGGCAAAACAGCTGGAATGGTGTAATGAAGCGCCTTTCTACACTCTCGGTCCTTTGACAACTGATATTGCTCCTGGATATGATCACATCACCTCTGCCATTGGTGCTGCCAATATTGGCGCTCTAGGCACTGCCCTTCTCTGCTATGTAACCCCTAAAGAGCATCTTGGATTGCCCAATCGGGATGACGTGAAGGCTGGAGTTATAGCATATAAAATAGCTGCTCATGCTGCTGATCTAGCCAAAGGTCATCCACATGCTCAAGAGTGGGATGACGCATTAAGCAAGGCAAGATTTGAGTTCCGGTGGATGGACCAGTTTGCTTTGTCTCTAGACCCTATGACTGCCATGTCCTTCCATGATGAAACCCTGCCTGCAGAAGGTGCCAAGGTGGCCCATTTTTGCTCTATGTGTGGGCCAAAGTTCTGTTCTATGAAGATAACAGAGGATGTTAGGAAGTATGCTGAGGAGCATGGTTATGGAACTGCTGAGGAAGCTGTGAAGCGTGGTATGGAAGCCATGAGTGCTGAGTTTCTTGCTGCCAAGAAAACTGTCAGTGGAGAACAACATGGTGAAATTGGTGGAGAAATTTACTTGCCAGAAAGTTATGTAAAATCCTCAGAGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005912 GO:0006810 GO:0007043 GO:0007154 GO:0007163 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016323 GO:0022607 GO:0023052 GO:0030011 GO:0030029 GO:0030054 GO:0032501 GO:0032502 GO:0033036 GO:0033043 GO:0034329 GO:0034330 GO:0035088 GO:0035090 GO:0035239 GO:0035295 GO:0042886 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045108 GO:0045184 GO:0045197 GO:0045199 GO:0045216 GO:0048229 GO:0048513 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048598 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051716 GO:0055046 GO:0055123 GO:0061245 GO:0065007 GO:0070161 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0098590

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8

Protein Analysis

651

Amino Acids

72.4

Weight (kDa)

5.91

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ThiC_Rad_SAM	PF01964	171 - 591	5e-184	Radical SAM ThiC family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11330 AT5G05850
fragaria_vesca	FvH4_2g00400 FvH4_5g35210 FvH4_5g35210 FvH4_5g35210
malus_domestica	MD05G1037800.v1.1 MD10G1041600.v1.1
prunus_persica	Prupe.8G003900_v2.0.a1
pyrus_communis	pycom05g02800 pycom10g02870
rosa_chinensis	RchiOBHm_Chr6g0249641 RchiOBHm_Chr7g0236341
rosa_laevigata	RLG00000001082 RLG00000015555 RLG00000018499 RLG00000018876 RLG00000019048
rosa_multiflora	Rmu_co8191622.1_g000001 Rmu_co8329307.1_g000001 Rmu_sc0000704.1_g000050
rosa_roxburghii	Rroxscaffold_1G00019180 Rroxscaffold_3G00225210
rosa_rugosa	Rorug03G0338400 Rorug04G0195800 Rorug05G0494200 Rorug07G0296200 Rorug07G0296300 Rorug07G0296400 Rorug07G0296500 Rorug07G0296500 Rorug07G0296500 Rorug07G0296600 Rorug07G0296700 Rorug07G0296700
rosa_samantha	Rh1AG198700 Rh2AG167200 Rh2AG422000 Rh2BG174100 Rh2DG172600 Rh2DG587800 Rh3AG279400 Rh4AG190400 Rh5BG446700 Rh5DG459100 Rh6AG004200 Rh6AG382900 Rh6BG005900 Rh6CG003200 Rh6CG396200 Rh6DG003000 Rh7AG451000 Rh7BG422700 Rh7CG470600 Rh7DG440400
rosa_wichuraiana	Rw0G019890 Rw6G000460 Rw7G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	750
AasI	GACNNNNNNGTC	1 cut(s)	1675
Acc36I	ACCTGC	1 cut(s)	1264
Acc65I	GGTACC	1 cut(s)	220
AccB1I	GGYRCC	2 cut(s)	220, 1709
AccB7I	CCANNNNNTGG	1 cut(s)	446
AccII	CGCG	1 cut(s)	1220
AciI	CCGC	2 cut(s)	425, 1220
AclWI	GGATC	7 cut(s)	182, 242, 578, 829, 842, 1050, 1063
AcsI	RAATTY	2 cut(s)	1096, 1914
AcuI	CTGAAG	1 cut(s)	624
AcvI	CACGTG	1 cut(s)	443
AcyI	GRCGYC	1 cut(s)	112
AfaI	GTAC	8 cut(s)	79, 222, 499, 521, 560, 855, 870, 1007
AfiI	CCNNNNNNNGG	6 cut(s)	446, 831, 991, 1636, 1706, 1950
AflIII	ACRYGT	2 cut(s)	442, 1297
AgsI	TTSAA	3 cut(s)	120, 890, 950
AjiI	CACGTC	1 cut(s)	1516
AjnI	CCWGG	2 cut(s)	1291, 1399
AjuI	GAANNNNNNNTTGG	2 cut(s)	1738, 1770
Alw21I	GWGCWC	4 cut(s)	308, 354, 1113, 1227
Alw26I	GTCTC	4 cut(s)	815, 1048, 1171, 1659
AlwI	GGATC	7 cut(s)	182, 242, 578, 829, 842, 1050, 1063
Ama87I	CYCGRG	2 cut(s)	73, 1047
AoxI	GGCC	3 cut(s)	171, 1719, 1742
ApeKI	GCWGC	4 cut(s)	1433, 1547, 1556, 1865
ApoI	RAATTY	2 cut(s)	1096, 1914
Asp700I	GAANNNNTTC	1 cut(s)	327
Asp718I	GGTACC	1 cut(s)	220
AspLEI	GCGC	2 cut(s)	1360, 1448
AspS9I	GGNCC	9 cut(s)	164, 422, 754, 793, 1289, 1376, 1639, 1720, 1742
AsuC2I	CCSGG	1 cut(s)	1182
AsuHPI	GGTGA	5 cut(s)	368, 970, 1178, 1408, 1910
AsuII	TTCGAA	1 cut(s)	285
AvaI	CYCGRG	2 cut(s)	73, 1047
AvaII	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
AxyI	CCTNAGG	1 cut(s)	168
BamHI	GGATCC	2 cut(s)	834, 1055
BanI	GGYRCC	2 cut(s)	220, 1709
BanII	GRGCYC	2 cut(s)	453, 1227
BauI	CACGAG	1 cut(s)	612
BbrPI	CACGTG	1 cut(s)	443
Bbv12I	GWGCWC	4 cut(s)	308, 354, 1113, 1227
BbvCI	CCTCAGC	2 cut(s)	1791, 1815
BbvI	GCAGC	4 cut(s)	1420, 1534, 1543, 1852
BccI	CCATC	7 cut(s)	161, 286, 881, 893, 989, 1163, 1630
BciT130I	CCWGG	2 cut(s)	1293, 1401
BclI	TGATCA	1 cut(s)	1408
BcnI	CCSGG	1 cut(s)	1182
BcoDI	GTCTC	4 cut(s)	815, 1048, 1171, 1659
BfaI	CTAG	3 cut(s)	1451, 1565, 1658
BfmI	CTRYAG	2 cut(s)	801, 1701
BfoI	RGCGCY	2 cut(s)	1361, 1449
BfuAI	ACCTGC	1 cut(s)	1264
BglI	GCCNNNNNGGC	1 cut(s)	1718
BglII	AGATCT	1 cut(s)	599
BisI	GCNGC	4 cut(s)	1434, 1548, 1557, 1866
BlpI	GCTNAGC	2 cut(s)	957, 1078
BlsI	GCNGC	4 cut(s)	1435, 1549, 1558, 1867
BmcAI	AGTACT	1 cut(s)	79
Bme1390I	CCNGG	3 cut(s)	1182, 1293, 1401
Bme18I	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
BmeT110I	CYCGRG	2 cut(s)	73, 1047
BmgBI	CACGTC	1 cut(s)	1516
BmgT120I	GGNCC	9 cut(s)	164, 422, 754, 793, 1289, 1376, 1639, 1720, 1742
BmiI	GGNNCC	6 cut(s)	222, 452, 836, 1057, 1186, 1711
BmrFI	CCNGG	3 cut(s)	1182, 1293, 1401
BmrI	ACTGGG	2 cut(s)	931, 1123
BmsI	GCATC	4 cut(s)	14, 91, 1186, 1498
BmuI	ACTGGG	2 cut(s)	931, 1123
BpmI	CTGGAG	3 cut(s)	177, 405, 1545
Bpu10I	CCTNAGC	3 cut(s)	160, 1791, 1815
Bpu1102I	GCTNAGC	2 cut(s)	957, 1078
Bpu14I	TTCGAA	1 cut(s)	285
BpuEI	CTTGAG	3 cut(s)	677, 1195, 1572
BpuMI	CCSGG	1 cut(s)	1182
Bsa29I	ATCGAT	1 cut(s)	246
BsaAI	YACGTR	2 cut(s)	443, 842
BsaHI	GRCGYC	1 cut(s)	112
BsaI	GGTCTC	2 cut(s)	815, 1171
BsaJI	CCNNGG	3 cut(s)	216, 233, 1713
BsaWI	WCCGGW	1 cut(s)	1629
Bsc4I	CCNNNNNNNGG	6 cut(s)	446, 831, 991, 1636, 1706, 1950
Bse1I	ACTGG	6 cut(s)	346, 417, 857, 926, 1118, 1642
Bse21I	CCTNAGG	1 cut(s)	168
BseBI	CCWGG	2 cut(s)	1293, 1401
BseCI	ATCGAT	1 cut(s)	246
BseDI	CCNNGG	3 cut(s)	216, 233, 1713
BseLI	CCNNNNNNNGG	6 cut(s)	446, 831, 991, 1636, 1706, 1950
BseNI	ACTGG	6 cut(s)	346, 417, 857, 926, 1118, 1642
BseRI	GAGGAG	2 cut(s)	1065, 1808
BseXI	GCAGC	4 cut(s)	1420, 1534, 1543, 1852
BseYI	CCCAGC	1 cut(s)	989
BsgI	GTGCAG	2 cut(s)	1194, 1292
Bsh1236I	CGCG	1 cut(s)	1220
BshFI	GGCC	3 cut(s)	173, 1721, 1744
BshNI	GGYRCC	2 cut(s)	220, 1709
BshVI	ATCGAT	1 cut(s)	246
BsiHKAI	GWGCWC	4 cut(s)	308, 354, 1113, 1227
BsiHKCI	CYCGRG	2 cut(s)	73, 1047
BsiSI	CCGG	2 cut(s)	1182, 1630
BslFI	GGGAC	1 cut(s)	877
BslI	CCNNNNNNNGG	6 cut(s)	446, 831, 991, 1636, 1706, 1950
BsmAI	GTCTC	4 cut(s)	815, 1048, 1171, 1659
BsmFI	GGGAC	1 cut(s)	877
BsnI	GGCC	3 cut(s)	173, 1721, 1744
Bso31I	GGTCTC	2 cut(s)	815, 1171
BsoBI	CYCGRG	2 cut(s)	73, 1047
Bsp119I	TTCGAA	1 cut(s)	285
Bsp1286I	GDGCHC	5 cut(s)	308, 354, 453, 1113, 1227
Bsp143I	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
Bsp1720I	GCTNAGC	2 cut(s)	957, 1078
BspACI	CCGC	2 cut(s)	425, 1220
BspANI	GGCC	3 cut(s)	173, 1721, 1744
BspDI	ATCGAT	1 cut(s)	246
BspFNI	CGCG	1 cut(s)	1220
BspHI	TCATGA	1 cut(s)	331
BspLI	GGNNCC	6 cut(s)	222, 452, 836, 1057, 1186, 1711
BspMAI	CTGCAG	1 cut(s)	1705
BspMI	ACCTGC	1 cut(s)	1264
BspPI	GGATC	7 cut(s)	182, 242, 578, 829, 842, 1050, 1063
BspT104I	TTCGAA	1 cut(s)	285
BspT107I	GGYRCC	2 cut(s)	220, 1709
BspTNI	GGTCTC	2 cut(s)	815, 1171
BsrI	ACTGG	6 cut(s)	346, 417, 857, 926, 1118, 1642
BssECI	CCNNGG	3 cut(s)	216, 233, 1713
BssMI	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
BssNI	GRCGYC	1 cut(s)	112
BssSI	CACGAG	1 cut(s)	612
BssT1I	CCWWGG	2 cut(s)	216, 1713
Bst2BI	CACGAG	1 cut(s)	612
Bst2UI	CCWGG	2 cut(s)	1293, 1401
Bst4CI	ACNGT	7 cut(s)	291, 563, 787, 868, 1005, 1215, 1879
Bst6I	CTCTTC	2 cut(s)	279, 732
BstACI	GRCGYC	1 cut(s)	112
BstAPI	GCANNNNNTGC	1 cut(s)	1709
BstBAI	YACGTR	2 cut(s)	443, 842
BstBI	TTCGAA	1 cut(s)	285
BstC8I	GCNNGC	2 cut(s)	727, 1701
BstENI	CCTNNNNNAGG	2 cut(s)	1704, 1948
BstFNI	CGCG	1 cut(s)	1220
BstH2I	RGCGCY	2 cut(s)	1361, 1449
BstHHI	GCGC	2 cut(s)	1360, 1448
BstKTI	GATC	8 cut(s)	190, 250, 586, 602, 837, 1058, 1411, 1564
BstMAI	GTCTC	4 cut(s)	815, 1048, 1171, 1659
BstMBI	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
BstNI	CCWGG	2 cut(s)	1293, 1401
BstNSI	RCATGY	2 cut(s)	1301, 1586
BstSCI	CCNGG	3 cut(s)	1180, 1291, 1399
BstSFI	CTRYAG	2 cut(s)	801, 1701
BstSNI	TACGTA	1 cut(s)	842
BstUI	CGCG	1 cut(s)	1220
BstV1I	GCAGC	4 cut(s)	1420, 1534, 1543, 1852
BstX2I	RGATCY	3 cut(s)	599, 834, 1055
BstYI	RGATCY	3 cut(s)	599, 834, 1055
Bsu15I	ATCGAT	1 cut(s)	246
Bsu36I	CCTNAGG	1 cut(s)	168
BsuRI	GGCC	3 cut(s)	173, 1721, 1744
BsuTUI	ATCGAT	1 cut(s)	246
BtrI	CACGTC	1 cut(s)	1516
BtsI	GCAGTG	1 cut(s)	1455
BtsIMutI	CAGTG	7 cut(s)	296, 424, 543, 783, 1111, 1455, 1888
BveI	ACCTGC	1 cut(s)	1264
Cac8I	GCNNGC	2 cut(s)	727, 1701
CciI	TCATGA	1 cut(s)	331
CfoI	GCGC	2 cut(s)	1360, 1448
Cfr13I	GGNCC	9 cut(s)	164, 422, 754, 793, 1289, 1376, 1639, 1720, 1742
ClaI	ATCGAT	1 cut(s)	246
CseI	GACGC	2 cut(s)	101, 1610
Csp6I	GTAC	8 cut(s)	78, 221, 498, 520, 559, 854, 869, 1006
CviQI	GTAC	8 cut(s)	78, 221, 498, 520, 559, 854, 869, 1006
DpnI	GATC	8 cut(s)	189, 249, 585, 601, 836, 1057, 1410, 1563
DpnII	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
DrdI	GACNNNNNNGTC	1 cut(s)	1675
DseDI	GACNNNNNNGTC	1 cut(s)	1675
Eam1104I	CTCTTC	2 cut(s)	279, 732
EarI	CTCTTC	2 cut(s)	279, 732
Ecl136II	GAGCTC	1 cut(s)	1225
Eco105I	TACGTA	1 cut(s)	842
Eco130I	CCWWGG	2 cut(s)	216, 1713
Eco24I	GRGCYC	2 cut(s)	453, 1227
Eco31I	GGTCTC	2 cut(s)	815, 1171
Eco47I	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
Eco53kI	GAGCTC	1 cut(s)	1225
Eco57I	CTGAAG	1 cut(s)	624
Eco72I	CACGTG	1 cut(s)	443
Eco81I	CCTNAGG	1 cut(s)	168
Eco88I	CYCGRG	2 cut(s)	73, 1047
EcoICRI	GAGCTC	1 cut(s)	1225
EcoNI	CCTNNNNNAGG	2 cut(s)	1704, 1948
EcoO109I	RGGNCCY	2 cut(s)	164, 1289
EcoRII	CCWGG	2 cut(s)	1291, 1399
EcoT14I	CCWWGG	2 cut(s)	216, 1713
EcoT38I	GRGCYC	2 cut(s)	453, 1227
ErhI	CCWWGG	2 cut(s)	216, 1713
FalI	AAGNNNNNCTT	6 cut(s)	632, 664, 1061, 1093, 1476, 1508
FaqI	GGGAC	1 cut(s)	877
FbaI	TGATCA	1 cut(s)	1408
Fnu4HI	GCNGC	4 cut(s)	1434, 1548, 1557, 1866
FriOI	GRGCYC	2 cut(s)	453, 1227
Fsp4HI	GCNGC	4 cut(s)	1434, 1548, 1557, 1866
FspBI	CTAG	3 cut(s)	1451, 1565, 1658
GlaI	GCGC	2 cut(s)	1359, 1447
GluI	GCNGC	4 cut(s)	1434, 1548, 1557, 1866
GsaI	CCCAGC	1 cut(s)	993
GsuI	CTGGAG	3 cut(s)	177, 405, 1545
HaeII	RGCGCY	2 cut(s)	1361, 1449
HaeIII	GGCC	3 cut(s)	173, 1721, 1744
HapII	CCGG	2 cut(s)	1182, 1630
HgaI	GACGC	2 cut(s)	101, 1610
HhaI	GCGC	2 cut(s)	1360, 1448
Hin1I	GRCGYC	1 cut(s)	112
Hin6I	GCGC	2 cut(s)	1358, 1446
HinP1I	GCGC	2 cut(s)	1358, 1446
HincII	GTYRAC	1 cut(s)	478
HindII	GTYRAC	1 cut(s)	478
HindIII	AAGCTT	1 cut(s)	578
HinfI	GANTC	2 cut(s)	903, 1315
HpaII	CCGG	2 cut(s)	1182, 1630
HphI	GGTGA	5 cut(s)	368, 970, 1178, 1408, 1910
Hpy166II	GTNNAC	3 cut(s)	376, 478, 500
Hpy188I	TCNGA	7 cut(s)	147, 208, 516, 604, 935, 945, 1948
Hpy8I	GTNNAC	3 cut(s)	376, 478, 500
Hpy99I	CGWCG	1 cut(s)	372
HpyAV	CCTTC	9 cut(s)	94, 127, 292, 642, 1280, 1472, 1513, 1690, 1700
HpyCH4III	ACNGT	7 cut(s)	291, 563, 787, 868, 1005, 1215, 1879
HpyCH4IV	ACGT	3 cut(s)	442, 841, 1515
HpyCH4V	TGCA	9 cut(s)	13, 39, 65, 701, 1067, 1211, 1273, 1309, 1703
HpySE526I	ACGT	3 cut(s)	442, 841, 1515
Hsp92I	GRCGYC	1 cut(s)	112
HspAI	GCGC	2 cut(s)	1358, 1446
KpnI	GGTACC	1 cut(s)	224
Ksp22I	TGATCA	1 cut(s)	1408
Kzo9I	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
LmnI	GCTCC	5 cut(s)	456, 652, 1222, 1402, 1795
Lsp1109I	GCAGC	4 cut(s)	1420, 1534, 1543, 1852
LweI	GCATC	4 cut(s)	14, 91, 1186, 1498
MaeI	CTAG	3 cut(s)	1451, 1565, 1658
MaeII	ACGT	3 cut(s)	442, 841, 1515
MaeIII	GTNAC	2 cut(s)	842, 1474
MalI	GATC	8 cut(s)	189, 249, 585, 601, 836, 1057, 1410, 1563
MboI	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
MboII	GAAGA	5 cut(s)	48, 266, 347, 749, 1774
MflI	RGATCY	3 cut(s)	599, 834, 1055
MhlI	GDGCHC	5 cut(s)	308, 354, 453, 1113, 1227
MluCI	AATT	8 cut(s)	202, 491, 537, 624, 1038, 1096, 1902, 1914
MroXI	GAANNNNTTC	1 cut(s)	327
MseI	TTAA	7 cut(s)	129, 179, 435, 696, 918, 1229, 1607
MslI	CAYNNNNRTG	6 cut(s)	515, 788, 816, 1116, 1581, 1803
MspA1I	CMGCKG	1 cut(s)	1339
MspI	CCGG	2 cut(s)	1182, 1630
MspR9I	CCNGG	3 cut(s)	1182, 1293, 1401
MvaI	CCWGG	2 cut(s)	1293, 1401
MvnI	CGCG	1 cut(s)	1220
NciI	CCSGG	1 cut(s)	1182
NdeII	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
NlaIV	GGNNCC	6 cut(s)	222, 452, 836, 1057, 1186, 1711
NspI	RCATGY	2 cut(s)	1301, 1586
NspV	TTCGAA	1 cut(s)	285
PaeR7I	CTCGAG	1 cut(s)	1047
PagI	TCATGA	1 cut(s)	331
PciI	ACATGT	1 cut(s)	1297
PdmI	GAANNNNTTC	1 cut(s)	327
PfeI	GAWTC	2 cut(s)	903, 1315
PflMI	CCANNNNNTGG	1 cut(s)	446
PfoI	TCCNGGA	1 cut(s)	1399
PkrI	GCNGC	4 cut(s)	1435, 1549, 1558, 1867
PmaCI	CACGTG	1 cut(s)	443
PmlI	CACGTG	1 cut(s)	443
Ppu21I	YACGTR	2 cut(s)	443, 842
PpuMI	RGGWCCY	2 cut(s)	164, 1289
PscI	ACATGT	1 cut(s)	1297
PsiI	TTATAA	1 cut(s)	750
Psp124BI	GAGCTC	1 cut(s)	1227
Psp5II	RGGWCCY	2 cut(s)	164, 1289
Psp6I	CCWGG	2 cut(s)	1291, 1399
PspCI	CACGTG	1 cut(s)	443
PspFI	CCCAGC	1 cut(s)	989
PspGI	CCWGG	2 cut(s)	1291, 1399
PspN4I	GGNNCC	6 cut(s)	222, 452, 836, 1057, 1186, 1711
PspPI	GGNCC	9 cut(s)	164, 422, 754, 793, 1289, 1376, 1639, 1720, 1742
PspPPI	RGGWCCY	2 cut(s)	164, 1289
PstI	CTGCAG	1 cut(s)	1705
PsuI	RGATCY	3 cut(s)	599, 834, 1055
PvuII	CAGCTG	1 cut(s)	1339
RsaI	GTAC	8 cut(s)	79, 222, 499, 521, 560, 855, 870, 1007
RsaNI	GTAC	8 cut(s)	78, 221, 498, 520, 559, 854, 869, 1006
RseI	CAYNNNNRTG	6 cut(s)	515, 788, 816, 1116, 1581, 1803
SacI	GAGCTC	1 cut(s)	1227
SaqAI	TTAA	7 cut(s)	129, 179, 435, 696, 918, 1229, 1607
SatI	GCNGC	4 cut(s)	1434, 1548, 1557, 1866
Sau3AI	GATC	8 cut(s)	187, 247, 583, 599, 834, 1055, 1408, 1561
Sau96I	GGNCC	9 cut(s)	164, 422, 754, 793, 1289, 1376, 1639, 1720, 1742
ScaI	AGTACT	1 cut(s)	79
ScrFI	CCNGG	3 cut(s)	1182, 1293, 1401
SduI	GDGCHC	5 cut(s)	308, 354, 453, 1113, 1227
SfaNI	GCATC	4 cut(s)	14, 91, 1186, 1498
SfcI	CTRYAG	2 cut(s)	801, 1701
Sfr274I	CTCGAG	1 cut(s)	1047
SfuI	TTCGAA	1 cut(s)	285
SinI	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
SlaI	CTCGAG	1 cut(s)	1047
SmiMI	CAYNNNNRTG	6 cut(s)	515, 788, 816, 1116, 1581, 1803
SmlI	CTYRAG	4 cut(s)	656, 1047, 1174, 1587
SmoI	CTYRAG	4 cut(s)	656, 1047, 1174, 1587
SnaBI	TACGTA	1 cut(s)	842
Sse9I	AATT	8 cut(s)	202, 491, 537, 624, 1038, 1096, 1902, 1914
SsiI	CCGC	2 cut(s)	425, 1220
SspI	AATATT	1 cut(s)	1441
SspMI	CTAG	3 cut(s)	1451, 1565, 1658
SstI	GAGCTC	1 cut(s)	1227
StyD4I	CCNGG	3 cut(s)	1180, 1291, 1399
StyI	CCWWGG	2 cut(s)	216, 1713
TaaI	ACNGT	7 cut(s)	291, 563, 787, 868, 1005, 1215, 1879
TaiI	ACGT	3 cut(s)	445, 844, 1518
TaqI	TCGA	5 cut(s)	246, 285, 367, 735, 1048
TaqII	GACCGA	1 cut(s)	1364
TasI	AATT	8 cut(s)	202, 491, 537, 624, 1038, 1096, 1902, 1914
TatI	WGTACW	3 cut(s)	77, 519, 558
TfiI	GAWTC	2 cut(s)	903, 1315
Tru1I	TTAA	7 cut(s)	129, 179, 435, 696, 918, 1229, 1607
Tru9I	TTAA	7 cut(s)	129, 179, 435, 696, 918, 1229, 1607
TscAI	CASTG	7 cut(s)	296, 424, 550, 790, 1118, 1462, 1888
TseI	GCWGC	4 cut(s)	1433, 1547, 1556, 1865
TspDTI	ATGAA	9 cut(s)	320, 348, 405, 1052, 1295, 1299, 1368, 1704, 1775
TspRI	CASTG	7 cut(s)	296, 424, 550, 790, 1118, 1462, 1888
Van91I	CCANNNNNTGG	1 cut(s)	446
VpaK11BI	GGWCC	7 cut(s)	164, 422, 754, 793, 1289, 1376, 1639
XagI	CCTNNNNNAGG	2 cut(s)	1704, 1948
XapI	RAATTY	2 cut(s)	1096, 1914
XbaI	TCTAGA	1 cut(s)	1657
XceI	RCATGY	2 cut(s)	1301, 1586
XhoI	CTCGAG	1 cut(s)	1047
XmnI	GAANNNNTTC	1 cut(s)	327
XspI	CTAG	3 cut(s)	1451, 1565, 1658
ZrmI	AGTACT	1 cut(s)	79

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.