Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001144

Physical Location & Seq

Genomic Coordinates Forward (+)

8410248 .. 8420084

Gene Structure 9837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00225210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGTCTTTCTCAATTGCTCAAACGAATCCCATCAAAACAAACCCTTACCCGTCCCGATGGATCGGAACCGCTTCCCGATGCTCTCCTACGTCCTGGACCGGCTTCCCTCCCTGGGATCCAAGCCAACCACCCCCGTCGTCTCCGACCTCATGTCCATCCACATCGGCGATCCAGCCGCTGCTCAAAGCGAGATGGCTGACCGGATGCCCCACCTCTCCGACCCGAAAGTCATCGCCGCGATGAGACGCGCCGTGGCCGACGTGGCTCAGGCCCGATCCGTCCTCACCGAGCTCGGCGACCGACCCGATCACGAGACCGTTGACTCCGCCAAGGCCAAGCTCGCCGCCATCGATGCCGGCCGTGCTGCTGACGTGGCGGAGACGGAGCAGCGTGAATCGGCGGGGAGAGAAGAGCAAGAGTGCATGGCGATCCTCCAGCTGGAGGAGTTGCACGTCGCCTACGAGAAGCTTCTCAGGGACGCCGAGGAGAGGCTCGTCAAGATTTACCGGTCGGCGGAGGCCGGAGTGGTGGAGGAGGAGGAGGAGGAGAAGGTGGATGGCGTCAGCGACCAAGTCGATGAGGAGGTCGTCCGGATTCTGCAGCAGGCGTCGTCCGGGACTGGGCCGGACCGGGTCGACCTCTCGGATCGAGGCTTGCGTTTCTTGCCCGAGGAGTTTGGCCGGATCAGTGGATTGCTTCAGCTTGATCTTTCCAACAATGAGCTGCAGGCCATTCCTGATACAATAGCCGGATTAGAGAAGCTAGAAATGCTGAATTTGTCTACCAATCACTTGGAGTCACTGCCCGAGACGATTGGGCTGCTGCAAAATTTGAAGCTCCTCACTGTCTCCGGCAACAAGCTAACTGCCCTTCCTGACTCTATCTGCCACTGCAGGTCATTGGTGGAGTTGGATGTGAGTTTCAACCAGCTCACGTACTTGCCAACCAACATTGGTTATGAGTTGGTTAATCTGCAGAAGCTTTCGGTGCAATTGAACAAAATCCGTACCTTTCCTACCTCTATTTGTGAGTTGAGGTCTTTGCTGTCTTTGGATGCTCACTTCAATGAGCTACGTGGTCTTCCACTAGCTTTTGGCCGATTGACTAGTCTCCAAAGTCTCAACCTTGCCAGTAATTTTACTGATCTCACTGAGCTCCCGGATACTTTTGGTGATCTAACCAATCTCAAGGAACTTGATCTCAGCAACAATCAGGTTCATGCTCTTCCAGATACATTTGGCCGCCTTGAAAATCTGGTTAAACTTAACCTGGATGGAAACCCTCTTGTGGTTCCGCCTCCTGATGTAGTTCAACAAGGTGTTGAAGCCATCAAGGTCTTTATGAGCAATAGGTGGTTAGAGATACTGGCGGAAGAAGAAAAGAAGAGCATGCTTCAAGTACAAGAACAAGAAGAAGCAGGATGGTTGACACGCGGCACTTCTTGGGTGAAGGGTTATGTTTCAGGTGTTTCTGAATATCTATCCCCAAAAGCTCCCGAAGACCCTATTCTTAATCAGCAGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005912 GO:0006810 GO:0007043 GO:0007154 GO:0007163 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016323 GO:0022607 GO:0023052 GO:0030011 GO:0030029 GO:0030054 GO:0032501 GO:0032502 GO:0033036 GO:0033043 GO:0034329 GO:0034330 GO:0035088 GO:0035090 GO:0035239 GO:0035295 GO:0042886 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045108 GO:0045184 GO:0045197 GO:0045199 GO:0045216 GO:0048229 GO:0048513 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048598 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051716 GO:0055046 GO:0055123 GO:0061245 GO:0065007 GO:0070161 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0098590

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8

Protein Analysis

508

Amino Acids

56.27

Weight (kDa)

4.67

Isoelectric Point (pI)

49.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	213 - 265	3.9e-09	Leucine rich repeat
LRR_14	PF23598	255 - 307	1e-06	Leucine-rich repeat region
LRR_8	PF13855	258 - 311	4.2e-07	Leucine rich repeat
LRR_8	PF13855	299 - 358	3.2e-06	Leucine rich repeat
LRR_14	PF23598	311 - 378	5.9e-08	Leucine-rich repeat region
LRR_8	PF13855	370 - 429	2e-10	Leucine rich repeat
LRR_14	PF23598	381 - 427	2.6e-06	Leucine-rich repeat region
LRR_4	PF12799	394 - 428	2.3e-06	Leucine Rich repeats (2 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11330 AT5G05850
fragaria_vesca	FvH4_2g00400 FvH4_5g35210 FvH4_5g35210 FvH4_5g35210
malus_domestica	MD05G1037800.v1.1 MD10G1041600.v1.1
prunus_persica	Prupe.8G003900_v2.0.a1
pyrus_communis	pycom05g02800 pycom10g02870
rosa_chinensis	RchiOBHm_Chr6g0249641 RchiOBHm_Chr7g0236341
rosa_laevigata	RLG00000001082 RLG00000015555 RLG00000018499 RLG00000018876 RLG00000019048
rosa_multiflora	Rmu_co8191622.1_g000001 Rmu_co8329307.1_g000001 Rmu_sc0000704.1_g000050
rosa_roxburghii	Rroxscaffold_1G00019180 Rroxscaffold_3G00225210
rosa_rugosa	Rorug03G0338400 Rorug04G0195800 Rorug05G0494200 Rorug07G0296200 Rorug07G0296300 Rorug07G0296400 Rorug07G0296500 Rorug07G0296500 Rorug07G0296500 Rorug07G0296600 Rorug07G0296700 Rorug07G0296700
rosa_samantha	Rh1AG198700 Rh2AG167200 Rh2AG422000 Rh2BG174100 Rh2DG172600 Rh2DG587800 Rh3AG279400 Rh4AG190400 Rh5BG446700 Rh5DG459100 Rh6AG004200 Rh6AG382900 Rh6BG005900 Rh6CG003200 Rh6CG396200 Rh6DG003000 Rh7AG451000 Rh7BG422700 Rh7CG470600 Rh7DG440400
rosa_wichuraiana	Rw0G019890 Rw6G000460 Rw7G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	227
Acc36I	ACCTGC	1 cut(s)	885
AccI	GTMKAC	2 cut(s)	636, 782
AccII	CGCG	3 cut(s)	239, 249, 1434
AccIII	TCCGGA	1 cut(s)	591
AclWI	GGATC	8 cut(s)	69, 111, 124, 164, 270, 424, 654, 692
AcoI	YGGCCR	5 cut(s)	255, 358, 679, 1096, 1240
AcsI	RAATTY	2 cut(s)	775, 829
AcuI	CTGAAG	1 cut(s)	683
AcyI	GRCGYC	3 cut(s)	480, 561, 608
AfaI	GTAC	3 cut(s)	938, 1009, 1401
AfiI	CCNNNNNNNGG	7 cut(s)	113, 439, 442, 489, 514, 621, 1288
AgeI	ACCGGT	1 cut(s)	507
AgsI	TTSAA	8 cut(s)	835, 925, 997, 1066, 1250, 1313, 1325, 1397
AhdI	GACNNNNNGTC	1 cut(s)	151
AhlI	ACTAGT	1 cut(s)	1106
AjiI	CACGTC	3 cut(s)	262, 373, 454
AjnI	CCWGG	3 cut(s)	93, 111, 1269
Alw21I	GWGCWC	2 cut(s)	294, 1158
Alw26I	GTCTC	8 cut(s)	145, 238, 308, 374, 803, 853, 1115, 1124
AlwI	GGATC	8 cut(s)	69, 111, 124, 164, 270, 424, 654, 692
AlwNI	CAGNNNCTG	1 cut(s)	179
Ama87I	CYCGRG	2 cut(s)	668, 806
Aor13HI	TCCGGA	1 cut(s)	591
ApeKI	GCWGC	8 cut(s)	179, 365, 388, 601, 724, 820, 823, 1519
ApoI	RAATTY	2 cut(s)	775, 829
AsiGI	ACCGGT	1 cut(s)	507
Asp700I	GAANNNNTTC	1 cut(s)	71
AspLEI	GCGC	1 cut(s)	251
AspS9I	GGNCC	4 cut(s)	97, 271, 623, 628
AsuC2I	CCSGG	3 cut(s)	616, 632, 1160
AsuHPI	GGTGA	3 cut(s)	277, 1184, 1459
AvaI	CYCGRG	2 cut(s)	668, 806
AvaII	GGWCC	2 cut(s)	97, 628
BamHI	GGATCC	1 cut(s)	116
BanII	GRGCYC	2 cut(s)	294, 1158
BauI	CACGAG	1 cut(s)	311
BbsI	GAAGAC	2 cut(s)	1073, 1506
Bbv12I	GWGCWC	2 cut(s)	294, 1158
BbvI	GCAGC	7 cut(s)	166, 352, 400, 613, 711, 807, 810
BccI	CCATC	9 cut(s)	39, 52, 164, 187, 356, 551, 1268, 1337, 1416
BceAI	ACGGC	2 cut(s)	236, 345
BcgI	CGANNNNNNTGC	2 cut(s)	802, 836
BciT130I	CCWGG	3 cut(s)	95, 113, 1271
BciVI	GTATCC	1 cut(s)	1156
BcnI	CCSGG	3 cut(s)	616, 632, 1160
BcoDI	GTCTC	8 cut(s)	145, 238, 308, 374, 803, 853, 1115, 1124
BcuI	ACTAGT	1 cut(s)	1106
BfaI	CTAG	3 cut(s)	764, 1088, 1107
BfmI	CTRYAG	4 cut(s)	599, 725, 892, 974
BfuAI	ACCTGC	1 cut(s)	885
BfuI	GTATCC	1 cut(s)	1156
BglI	GCCNNNNNGGC	1 cut(s)	263
Bme1390I	CCNGG	6 cut(s)	95, 113, 616, 632, 1160, 1271
Bme18I	GGWCC	2 cut(s)	97, 628
BmeRI	GACNNNNNGTC	1 cut(s)	151
BmeT110I	CYCGRG	2 cut(s)	668, 806
BmgBI	CACGTC	3 cut(s)	262, 373, 454
BmgT120I	GGNCC	4 cut(s)	97, 271, 623, 628
BmiI	GGNNCC	3 cut(s)	68, 118, 1293
BmrFI	CCNGG	6 cut(s)	95, 113, 616, 632, 1160, 1271
BmrI	ACTGGG	1 cut(s)	630
BmsI	GCATC	4 cut(s)	69, 195, 343, 1045
BmuI	ACTGGG	1 cut(s)	630
BpiI	GAAGAC	2 cut(s)	1073, 1506
BpmI	CTGGAG	2 cut(s)	419, 461
Bpu10I	CCTNAGC	1 cut(s)	267
BpuEI	CTTGAG	1 cut(s)	1172
BpuMI	CCSGG	3 cut(s)	616, 632, 1160
Bsa29I	ATCGAT	1 cut(s)	351
BsaAI	YACGTR	2 cut(s)	936, 1076
BsaHI	GRCGYC	3 cut(s)	480, 561, 608
BsaI	GGTCTC	1 cut(s)	308
BsaJI	CCNNGG	6 cut(s)	111, 112, 252, 330, 483, 669
BsaWI	WCCGGW	3 cut(s)	201, 507, 591
Bsc4I	CCNNNNNNNGG	7 cut(s)	113, 439, 442, 489, 514, 621, 1288
Bse118I	RCCGGY	3 cut(s)	99, 356, 507
Bse1I	ACTGG	3 cut(s)	625, 1131, 1371
BseAI	TCCGGA	1 cut(s)	591
BseBI	CCWGG	3 cut(s)	95, 113, 1271
BseCI	ATCGAT	1 cut(s)	351
BseDI	CCNNGG	6 cut(s)	111, 112, 252, 330, 483, 669
BseGI	GGATG	7 cut(s)	156, 210, 562, 919, 1060, 1279, 1427
BseLI	CCNNNNNNNGG	7 cut(s)	113, 439, 442, 489, 514, 621, 1288
BseMII	CTCAG	4 cut(s)	281, 487, 1143, 1216
BseNI	ACTGG	3 cut(s)	625, 1131, 1371
BseX3I	CGGCCG	1 cut(s)	358
BseXI	GCAGC	7 cut(s)	166, 352, 400, 613, 711, 807, 810
Bsh1236I	CGCG	3 cut(s)	239, 249, 1434
Bsh1285I	CGRYCG	3 cut(s)	301, 361, 512
BshTI	ACCGGT	1 cut(s)	507
BshVI	ATCGAT	1 cut(s)	351
BsiEI	CGRYCG	3 cut(s)	301, 361, 512
BsiHKAI	GWGCWC	2 cut(s)	294, 1158
BsiHKCI	CYCGRG	2 cut(s)	668, 806
BslFI	GGGAC	3 cut(s)	38, 491, 631
BslI	CCNNNNNNNGG	7 cut(s)	113, 439, 442, 489, 514, 621, 1288
BsmAI	GTCTC	8 cut(s)	145, 238, 308, 374, 803, 853, 1115, 1124
BsmBI	CGTCTC	4 cut(s)	145, 238, 374, 803
BsmFI	GGGAC	3 cut(s)	38, 491, 631
Bso31I	GGTCTC	1 cut(s)	308
BsoBI	CYCGRG	2 cut(s)	668, 806
Bsp1286I	GDGCHC	2 cut(s)	294, 1158
Bsp13I	TCCGGA	1 cut(s)	591
BspCNI	CTCAG	4 cut(s)	280, 486, 1144, 1215
BspDI	ATCGAT	1 cut(s)	351
BspEI	TCCGGA	1 cut(s)	591
BspFNI	CGCG	3 cut(s)	239, 249, 1434
BspLI	GGNNCC	3 cut(s)	68, 118, 1293
BspMAI	CTGCAG	4 cut(s)	603, 729, 896, 978
BspMI	ACCTGC	1 cut(s)	885
BspPI	GGATC	8 cut(s)	69, 111, 124, 164, 270, 424, 654, 692
BspQI	GCTCTTC	3 cut(s)	405, 1230, 1379
BspTNI	GGTCTC	1 cut(s)	308
BsrFI	RCCGGY	3 cut(s)	99, 356, 507
BsrI	ACTGG	3 cut(s)	625, 1131, 1371
BssAI	RCCGGY	3 cut(s)	99, 356, 507
BssECI	CCNNGG	6 cut(s)	111, 112, 252, 330, 483, 669
BssNI	GRCGYC	3 cut(s)	480, 561, 608
BssSI	CACGAG	1 cut(s)	311
BssT1I	CCWWGG	1 cut(s)	330
Bst2BI	CACGAG	1 cut(s)	311
Bst2UI	CCWGG	3 cut(s)	95, 113, 1271
Bst4CI	ACNGT	2 cut(s)	319, 847
Bst6I	CTCTTC	3 cut(s)	405, 1230, 1379
BstACI	GRCGYC	3 cut(s)	480, 561, 608
BstBAI	YACGTR	2 cut(s)	936, 1076
BstC8I	GCNNGC	6 cut(s)	342, 358, 606, 656, 729, 1391
BstDEI	CTNAG	4 cut(s)	267, 473, 1152, 1202
BstDSI	CCRYGG	1 cut(s)	252
BstF5I	GGATG	7 cut(s)	156, 210, 562, 919, 1060, 1279, 1427
BstFNI	CGCG	3 cut(s)	239, 249, 1434
BstHHI	GCGC	1 cut(s)	251
BstMAI	GTCTC	8 cut(s)	145, 238, 308, 374, 803, 853, 1115, 1124
BstMCI	CGRYCG	3 cut(s)	301, 361, 512
BstMWI	GCNNNNNNNGC	8 cut(s)	263, 341, 353, 362, 374, 664, 769, 988
BstNI	CCWGG	3 cut(s)	95, 113, 1271
BstNSI	RCATGY	1 cut(s)	1393
BstSCI	CCNGG	6 cut(s)	93, 111, 614, 630, 1158, 1269
BstSFI	CTRYAG	4 cut(s)	599, 725, 892, 974
BstUI	CGCG	3 cut(s)	239, 249, 1434
BstV1I	GCAGC	7 cut(s)	166, 352, 400, 613, 711, 807, 810
BstV2I	GAAGAC	2 cut(s)	1073, 1506
BstX2I	RGATCY	1 cut(s)	116
BstXI	CCANNNNNNTGG	1 cut(s)	793
BstYI	RGATCY	1 cut(s)	116
BstZI	CGGCCG	1 cut(s)	358
Bsu15I	ATCGAT	1 cut(s)	351
BsuI	GTATCC	1 cut(s)	1156
BsuTUI	ATCGAT	1 cut(s)	351
BtgI	CCRYGG	1 cut(s)	252
BtgZI	GCGATG	2 cut(s)	217, 254
BtrI	CACGTC	3 cut(s)	262, 373, 454
BtsCI	GGATG	7 cut(s)	156, 210, 562, 919, 1060, 1279, 1427
BtsI	GCAGTG	2 cut(s)	800, 889
BtsIMutI	CAGTG	5 cut(s)	694, 800, 843, 889, 1149
BveI	ACCTGC	1 cut(s)	885
Cac8I	GCNNGC	6 cut(s)	342, 358, 606, 656, 729, 1391
CaiI	CAGNNNCTG	1 cut(s)	179
CfoI	GCGC	1 cut(s)	251
Cfr10I	RCCGGY	3 cut(s)	99, 356, 507
Cfr13I	GGNCC	4 cut(s)	97, 271, 623, 628
ClaI	ATCGAT	1 cut(s)	351
CpoI	CGGWCCG	1 cut(s)	628
CseI	GACGC	4 cut(s)	255, 488, 550, 597
Csp6I	GTAC	3 cut(s)	937, 1008, 1400
CspAI	ACCGGT	1 cut(s)	507
CspI	CGGWCCG	1 cut(s)	628
CviAII	CATG	4 cut(s)	151, 424, 1220, 1390
CviQI	GTAC	3 cut(s)	937, 1008, 1400
DdeI	CTNAG	4 cut(s)	267, 473, 1152, 1202
DrdI	GACNNNNNNGTC	1 cut(s)	227
DriI	GACNNNNNGTC	1 cut(s)	151
DseDI	GACNNNNNNGTC	1 cut(s)	227
EaeI	YGGCCR	5 cut(s)	255, 358, 679, 1096, 1240
EagI	CGGCCG	1 cut(s)	358
Eam1104I	CTCTTC	3 cut(s)	405, 1230, 1379
Eam1105I	GACNNNNNGTC	1 cut(s)	151
EarI	CTCTTC	3 cut(s)	405, 1230, 1379
EciI	GGCGGA	5 cut(s)	316, 392, 530, 1284, 1385
Ecl136II	GAGCTC	2 cut(s)	292, 1156
EclXI	CGGCCG	1 cut(s)	358
Eco130I	CCWWGG	1 cut(s)	330
Eco24I	GRGCYC	2 cut(s)	294, 1158
Eco31I	GGTCTC	1 cut(s)	308
Eco47I	GGWCC	2 cut(s)	97, 628
Eco52I	CGGCCG	1 cut(s)	358
Eco53kI	GAGCTC	2 cut(s)	292, 1156
Eco57I	CTGAAG	1 cut(s)	683
Eco88I	CYCGRG	2 cut(s)	668, 806
EcoICRI	GAGCTC	2 cut(s)	292, 1156
EcoRII	CCWGG	3 cut(s)	93, 111, 1269
EcoT14I	CCWWGG	1 cut(s)	330
EcoT38I	GRGCYC	2 cut(s)	294, 1158
ErhI	CCWWGG	1 cut(s)	330
Esp3I	CGTCTC	4 cut(s)	145, 238, 374, 803
FaeI	CATG	4 cut(s)	154, 427, 1223, 1393
FaiI	YATR	8 cut(s)	152, 425, 960, 1221, 1343, 1391, 1458, 1525
FaqI	GGGAC	3 cut(s)	38, 491, 631
FatI	CATG	4 cut(s)	150, 423, 1219, 1389
FauI	CCCGC	1 cut(s)	394
FblI	GTMKAC	2 cut(s)	636, 782
FokI	GGATG	7 cut(s)	143, 217, 569, 926, 1067, 1286, 1434
FriOI	GRGCYC	2 cut(s)	294, 1158
FspBI	CTAG	3 cut(s)	764, 1088, 1107
GlaI	GCGC	1 cut(s)	250
GsuI	CTGGAG	2 cut(s)	419, 461
HgaI	GACGC	4 cut(s)	255, 488, 550, 597
HhaI	GCGC	1 cut(s)	251
Hin1I	GRCGYC	3 cut(s)	480, 561, 608
Hin1II	CATG	4 cut(s)	154, 427, 1223, 1393
Hin6I	GCGC	1 cut(s)	249
HinP1I	GCGC	1 cut(s)	249
HincII	GTYRAC	3 cut(s)	322, 637, 1428
HindII	GTYRAC	3 cut(s)	322, 637, 1428
HindIII	AAGCTT	2 cut(s)	467, 980
HinfI	GANTC	6 cut(s)	26, 323, 395, 595, 797, 878
HphI	GGTGA	3 cut(s)	277, 1184, 1459
Hpy166II	GTNNAC	4 cut(s)	322, 637, 783, 1428
Hpy188I	TCNGA	5 cut(s)	66, 145, 220, 646, 1474
Hpy8I	GTNNAC	4 cut(s)	322, 637, 783, 1428
Hpy99I	CGWCG	4 cut(s)	140, 263, 458, 613
HpyAV	CCTTC	3 cut(s)	544, 881, 1444
HpyCH4III	ACNGT	2 cut(s)	319, 847
HpyCH4IV	ACGT	6 cut(s)	90, 261, 372, 453, 935, 1075
HpyCH4V	TGCA	8 cut(s)	423, 451, 601, 727, 826, 894, 976, 991
HpyF10VI	GCNNNNNNNGC	8 cut(s)	263, 341, 353, 362, 374, 664, 769, 988
HpyF3I	CTNAG	4 cut(s)	267, 473, 1152, 1202
HpySE526I	ACGT	6 cut(s)	90, 261, 372, 453, 935, 1075
Hsp92I	GRCGYC	3 cut(s)	480, 561, 608
Hsp92II	CATG	4 cut(s)	154, 427, 1223, 1393
HspAI	GCGC	1 cut(s)	249
Kpn2I	TCCGGA	1 cut(s)	591
KroI	GCCGGC	1 cut(s)	356
KroNI	GCCGGC	1 cut(s)	358
LguI	GCTCTTC	3 cut(s)	405, 1230, 1379
LmnI	GCTCC	4 cut(s)	385, 843, 1161, 1498
Lsp1109I	GCAGC	7 cut(s)	166, 352, 400, 613, 711, 807, 810
LweI	GCATC	4 cut(s)	69, 195, 343, 1045
MaeI	CTAG	3 cut(s)	764, 1088, 1107
MaeII	ACGT	6 cut(s)	90, 261, 372, 453, 935, 1075
MaeIII	GTNAC	1 cut(s)	798
MboII	GAAGA	8 cut(s)	422, 1073, 1217, 1385, 1388, 1396, 1424, 1511
MfeI	CAATTG	2 cut(s)	13, 992
MflI	RGATCY	1 cut(s)	116
MhlI	GDGCHC	2 cut(s)	294, 1158
MluCI	AATT	5 cut(s)	13, 775, 829, 992, 1135
MlyI	GAGTC	3 cut(s)	317, 806, 872
MmeI	TCCRAC	4 cut(s)	168, 243, 738, 891
MroI	TCCGGA	1 cut(s)	591
MroNI	GCCGGC	1 cut(s)	356
MroXI	GAANNNNTTC	1 cut(s)	71
MseI	TTAA	4 cut(s)	969, 1260, 1266, 1512
MslI	CAYNNNNRTG	1 cut(s)	1065
MspA1I	CMGCKG	2 cut(s)	179, 439
MspR9I	CCNGG	6 cut(s)	95, 113, 616, 632, 1160, 1271
MunI	CAATTG	2 cut(s)	13, 992
MvaI	CCWGG	3 cut(s)	95, 113, 1271
MvnI	CGCG	3 cut(s)	239, 249, 1434
MwoI	GCNNNNNNNGC	8 cut(s)	263, 341, 353, 362, 374, 664, 769, 988
NaeI	GCCGGC	1 cut(s)	358
NciI	CCSGG	3 cut(s)	616, 632, 1160
NgoMIV	GCCGGC	1 cut(s)	356
NlaIII	CATG	4 cut(s)	154, 427, 1223, 1393
NlaIV	GGNNCC	3 cut(s)	68, 118, 1293
NmeAIII	GCCGAG	2 cut(s)	273, 508
NmuCI	GTSAC	1 cut(s)	798
NspI	RCATGY	1 cut(s)	1393
PaeI	GCATGC	1 cut(s)	1393
PasI	CCCWGGG	1 cut(s)	112
PciSI	GCTCTTC	3 cut(s)	405, 1230, 1379
PcsI	WCGNNNNNNNCGW	3 cut(s)	348, 459, 655
PdiI	GCCGGC	1 cut(s)	358
PdmI	GAANNNNTTC	1 cut(s)	71
PfeI	GAWTC	3 cut(s)	26, 395, 595
PflFI	GACNNNGTC	2 cut(s)	572, 632
PfoI	TCCNGGA	3 cut(s)	93, 614, 1158
PinAI	ACCGGT	1 cut(s)	507
PleI	GAGTC	3 cut(s)	317, 805, 872
PpsI	GAGTC	3 cut(s)	317, 805, 872
Ppu21I	YACGTR	2 cut(s)	936, 1076
Psp124BI	GAGCTC	2 cut(s)	294, 1158
Psp6I	CCWGG	3 cut(s)	93, 111, 1269
PspGI	CCWGG	3 cut(s)	93, 111, 1269
PspN4I	GGNNCC	3 cut(s)	68, 118, 1293
PspPI	GGNCC	4 cut(s)	97, 271, 623, 628
PstI	CTGCAG	4 cut(s)	603, 729, 896, 978
PstNI	CAGNNNCTG	1 cut(s)	179
PsuI	RGATCY	1 cut(s)	116
PsyI	GACNNNGTC	2 cut(s)	572, 632
PvuII	CAGCTG	1 cut(s)	439
RsaI	GTAC	3 cut(s)	938, 1009, 1401
RsaNI	GTAC	3 cut(s)	937, 1008, 1400
RseI	CAYNNNNRTG	1 cut(s)	1065
Rsr2I	CGGWCCG	1 cut(s)	628
RsrII	CGGWCCG	1 cut(s)	628
SacI	GAGCTC	2 cut(s)	294, 1158
SalI	GTCGAC	1 cut(s)	635
SapI	GCTCTTC	3 cut(s)	405, 1230, 1379
SaqAI	TTAA	4 cut(s)	969, 1260, 1266, 1512
Sau96I	GGNCC	4 cut(s)	97, 271, 623, 628
SchI	GAGTC	3 cut(s)	317, 806, 872
ScrFI	CCNGG	6 cut(s)	95, 113, 616, 632, 1160, 1271
SduI	GDGCHC	2 cut(s)	294, 1158
SfaNI	GCATC	4 cut(s)	69, 195, 343, 1045
SfcI	CTRYAG	4 cut(s)	599, 725, 892, 974
SinI	GGWCC	2 cut(s)	97, 628
SmiMI	CAYNNNNRTG	1 cut(s)	1065
SmlI	CTYRAG	1 cut(s)	1187
SmoI	CTYRAG	1 cut(s)	1187
SpeI	ACTAGT	1 cut(s)	1106
SphI	GCATGC	1 cut(s)	1393
Sse9I	AATT	5 cut(s)	13, 775, 829, 992, 1135
SspMI	CTAG	3 cut(s)	764, 1088, 1107
SstI	GAGCTC	2 cut(s)	294, 1158
StyD4I	CCNGG	6 cut(s)	93, 111, 614, 630, 1158, 1269
StyI	CCWWGG	1 cut(s)	330
TaaI	ACNGT	2 cut(s)	319, 847
TaiI	ACGT	6 cut(s)	93, 264, 375, 456, 938, 1078
TaqI	TCGA	4 cut(s)	351, 576, 636, 649
TaqII	GACCGA	1 cut(s)	315
TasI	AATT	5 cut(s)	13, 775, 829, 992, 1135
TatI	WGTACW	1 cut(s)	1399
TauI	GCSGC	5 cut(s)	179, 239, 347, 1245, 1437
TfiI	GAWTC	3 cut(s)	26, 395, 595
Tru1I	TTAA	4 cut(s)	969, 1260, 1266, 1512
Tru9I	TTAA	4 cut(s)	969, 1260, 1266, 1512
TscAI	CASTG	5 cut(s)	694, 807, 850, 896, 1156
TseFI	GTSAC	1 cut(s)	798
TseI	GCWGC	8 cut(s)	179, 365, 388, 601, 724, 820, 823, 1519
Tsp45I	GTSAC	1 cut(s)	798
TspDTI	ATGAA	1 cut(s)	1208
TspGWI	ACGGA	3 cut(s)	268, 398, 995
TspRI	CASTG	5 cut(s)	694, 807, 850, 896, 1156
Tth111I	GACNNNGTC	2 cut(s)	572, 632
VpaK11BI	GGWCC	2 cut(s)	97, 628
XapI	RAATTY	2 cut(s)	775, 829
XceI	RCATGY	1 cut(s)	1393
XmiI	GTMKAC	2 cut(s)	636, 782
XmnI	GAANNNNTTC	1 cut(s)	71
XspI	CTAG	3 cut(s)	764, 1088, 1107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.