Rmu_co8191622.1_g000001

Plant intracellular ras-group-related LRR protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8191622.1
Physical Location & Seq
Forward (+)
16 .. 699
684 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8191622.1_g000001.1.cds

Sequence Viewer

Length: 684 bp
atggatccgaacccgtccaacttccccatcctctcctacgtcatggaccgcctttccaccgtaggatccaagtcccccgtcgacgaaatctccgacctcgagtccattcaaatcgacgatggccagccccagttgatcaaaccccagccaccatcctcagccctcctccaccagatgccccacctctccgaccccaaagtcatcgccgccatgacccgcgccgtctccgacgtcgcccagacccgctccgtcctccacgccctcggcgaccgtcccgaccacgaggccgtcgacgccgccagggccaagctcgcccacatcgagtccgctctctccaagaagctcgaggacctcgtcctctccccccgcccctccgacgtcgaccgcttccagtggcgggcccacctcgccgagcgcgagcaggagtgccgcgacgccgccgagaaggagaagcgcgactgcaaggccattctccagctcgacgagctccacgcctcctacgggaagcttctcaaggacgccgaggacaggctcaccaagatttatcgctccgccgaggacggattcgtcgaggagccgccgccggtcaccgaccaagtccatgaggaggtcgtcggcattctgcagcaggcttccgggactgcgctcgaccggatcaacctctccggccgccgcctccggtgc

Protein Analysis

228

Amino Acids

25.35

Weight (kDa)

5.29

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 197, 566
AatII GACGTC 2 cut(s) 234, 381
AccBSI CCGCTC 2 cut(s) 246, 329
AccI GTMKAC 3 cut(s) 81, 291, 381
AccII CGCG 4 cut(s) 219, 417, 432, 456
AclWI GGATC 4 cut(s) 12, 60, 73, 662
AcoI YGGCCR 2 cut(s) 121, 667
AcyI GRCGYC 5 cut(s) 231, 294, 378, 435, 519
AfiI CCNNNNNNNGG 4 cut(s) 397, 501, 528, 607
AgsI TTSAA 1 cut(s) 110
AhdI GACNNNNNGTC 1 cut(s) 100
AjnI CCWGG 1 cut(s) 299
AluBI AGCT 5 cut(s) 310, 343, 478, 487, 508
AluI AGCT 5 cut(s) 310, 343, 478, 487, 508
Alw21I GWGCWC 1 cut(s) 489
Alw26I GTCTC 1 cut(s) 229
AlwI GGATC 4 cut(s) 12, 60, 73, 662
Ama87I CYCGRG 2 cut(s) 98, 344
AoxI GGCC 6 cut(s) 121, 285, 303, 399, 465, 667
ApaI GGGCCC 1 cut(s) 403
ApeKI GCWGC 1 cut(s) 625
AspLEI GCGC 4 cut(s) 221, 417, 456, 646
AspS9I GGNCC 5 cut(s) 46, 303, 349, 399, 400
AsuC2I CCSGG 1 cut(s) 637
AsuHPI GGTGA 2 cut(s) 526, 580
AvaI CYCGRG 2 cut(s) 98, 344
AvaII GGWCC 2 cut(s) 46, 349
BaeGI GKGCMC 1 cut(s) 403
BalI TGGCCA 1 cut(s) 123
BamHI GGATCC 2 cut(s) 4, 65
BanII GRGCYC 2 cut(s) 403, 489
BauI CACGAG 1 cut(s) 281
Bbv12I GWGCWC 1 cut(s) 489
BbvCI CCTCAGC 1 cut(s) 157
BbvI GCAGC 1 cut(s) 637
BccI CCATC 3 cut(s) 35, 113, 160
BceAI ACGGC 2 cut(s) 206, 272
BciT130I CCWGG 1 cut(s) 301
BclI TGATCA 1 cut(s) 135
BcnI CCSGG 1 cut(s) 637
BcoDI GTCTC 1 cut(s) 229
BfmI CTRYAG 1 cut(s) 623
BglI GCCNNNNNGGC 1 cut(s) 302
BisI GCNGC 9 cut(s) 207, 297, 430, 438, 578, 581, 626, 670, 673
BlsI GCNGC 9 cut(s) 208, 298, 431, 439, 579, 582, 627, 671, 674
Bme1390I CCNGG 2 cut(s) 301, 637
Bme18I GGWCC 2 cut(s) 46, 349
BmeRI GACNNNNNGTC 1 cut(s) 100
BmeT110I CYCGRG 2 cut(s) 98, 344
BmgT120I GGNCC 5 cut(s) 46, 303, 349, 399, 400
BmiI GGNNCC 4 cut(s) 6, 67, 401, 576
BmrFI CCNGG 2 cut(s) 301, 637
BmrI ACTGGG 1 cut(s) 124
BmsI GCATC 1 cut(s) 165
BmuI ACTGGG 1 cut(s) 124
BpmI CTGGAG 1 cut(s) 458
Bpu10I CCTNAGC 1 cut(s) 157
BpuEI CTTGAG 1 cut(s) 497
BpuMI CCSGG 1 cut(s) 637
BsaHI GRCGYC 5 cut(s) 231, 294, 378, 435, 519
BsaJI CCNNGG 4 cut(s) 262, 300, 522, 555
BsaWI WCCGGW 2 cut(s) 651, 678
BsaXI ACNNNNNCTCC 2 cut(s) 74, 104
Bsc4I CCNNNNNNNGG 4 cut(s) 397, 501, 528, 607
Bse118I RCCGGY 1 cut(s) 583
Bse1I ACTGG 2 cut(s) 130, 391
BseBI CCWGG 1 cut(s) 301
BseDI CCNNGG 4 cut(s) 262, 300, 522, 555
BseGI GGATG 2 cut(s) 27, 152
BseLI CCNNNNNNNGG 4 cut(s) 397, 501, 528, 607
BseMII CTCAG 1 cut(s) 171
BseNI ACTGG 2 cut(s) 130, 391
BseRI GAGGAG 3 cut(s) 155, 587, 620
BseSI GKGCMC 1 cut(s) 403
BseX3I CGGCCG 1 cut(s) 667
BseXI GCAGC 1 cut(s) 637
BseYI CCCAGC 1 cut(s) 144
Bsh1236I CGCG 4 cut(s) 219, 417, 432, 456
Bsh1285I CGRYCG 4 cut(s) 271, 385, 652, 670
BshFI GGCC 6 cut(s) 123, 287, 305, 401, 467, 669
BsiEI CGRYCG 4 cut(s) 271, 385, 652, 670
BsiHKAI GWGCWC 1 cut(s) 489
BsiHKCI CYCGRG 2 cut(s) 98, 344
BsiSI CCGG 5 cut(s) 584, 636, 652, 666, 679
BslFI GGGAC 3 cut(s) 58, 258, 652
BslI CCNNNNNNNGG 4 cut(s) 397, 501, 528, 607
BsmAI GTCTC 1 cut(s) 229
BsmBI CGTCTC 1 cut(s) 229
BsmFI GGGAC 3 cut(s) 58, 258, 652
BsmI GAATGC 1 cut(s) 618
BsnI GGCC 6 cut(s) 123, 287, 305, 401, 467, 669
BsoBI CYCGRG 2 cut(s) 98, 344
Bsp120I GGGCCC 1 cut(s) 399
Bsp1286I GDGCHC 2 cut(s) 403, 489
Bsp143I GATC 4 cut(s) 4, 65, 135, 654
BspANI GGCC 6 cut(s) 123, 287, 305, 401, 467, 669
BspCNI CTCAG 1 cut(s) 170
BspFNI CGCG 4 cut(s) 219, 417, 432, 456
BspLI GGNNCC 4 cut(s) 6, 67, 401, 576
BspMAI CTGCAG 1 cut(s) 627
BspPI GGATC 4 cut(s) 12, 60, 73, 662
BsrBI CCGCTC 2 cut(s) 246, 329
BsrFI RCCGGY 1 cut(s) 583
BsrI ACTGG 2 cut(s) 130, 391
BssAI RCCGGY 1 cut(s) 583
BssECI CCNNGG 4 cut(s) 262, 300, 522, 555
BssMI GATC 4 cut(s) 4, 65, 135, 654
BssNI GRCGYC 5 cut(s) 231, 294, 378, 435, 519
BssSI CACGAG 1 cut(s) 281
Bst2BI CACGAG 1 cut(s) 281
Bst2UI CCWGG 1 cut(s) 301
Bst4CI ACNGT 2 cut(s) 61, 272
BstACI GRCGYC 5 cut(s) 231, 294, 378, 435, 519
BstC8I GCNNGC 5 cut(s) 125, 312, 399, 419, 630
BstDEI CTNAG 1 cut(s) 157
BstEII GGTNACC 1 cut(s) 586
BstF5I GGATG 2 cut(s) 27, 152
BstFNI CGCG 4 cut(s) 219, 417, 432, 456
BstHHI GCGC 4 cut(s) 221, 417, 456, 646
BstKTI GATC 4 cut(s) 7, 68, 138, 657
BstMAI GTCTC 1 cut(s) 229
BstMBI GATC 4 cut(s) 4, 65, 135, 654
BstMCI CGRYCG 4 cut(s) 271, 385, 652, 670
BstMWI GCNNNNNNNGC 6 cut(s) 293, 302, 311, 407, 484, 681
BstNI CCWGG 1 cut(s) 301
BstPI GGTNACC 1 cut(s) 586
BstSCI CCNGG 2 cut(s) 299, 635
BstSFI CTRYAG 1 cut(s) 623
BstSLI GKGCMC 1 cut(s) 403
BstUI CGCG 4 cut(s) 219, 417, 432, 456
BstV1I GCAGC 1 cut(s) 637
BstX2I RGATCY 2 cut(s) 4, 65
BstYI RGATCY 2 cut(s) 4, 65
BstZI CGGCCG 1 cut(s) 667
BsuRI GGCC 6 cut(s) 123, 287, 305, 401, 467, 669
BtgZI GCGATG 1 cut(s) 187
BtsCI GGATG 2 cut(s) 27, 152
BtsIMutI CAGTG 1 cut(s) 398
Cac8I GCNNGC 5 cut(s) 125, 312, 399, 419, 630
CfoI GCGC 4 cut(s) 221, 417, 456, 646
Cfr10I RCCGGY 1 cut(s) 583
Cfr13I GGNCC 5 cut(s) 46, 303, 349, 399, 400
CseI GACGC 3 cut(s) 302, 443, 527
CviAII CATG 3 cut(s) 43, 211, 602
DdeI CTNAG 1 cut(s) 157
DpnI GATC 4 cut(s) 6, 67, 137, 656
DpnII GATC 4 cut(s) 4, 65, 135, 654
DrdI GACNNNNNNGTC 2 cut(s) 197, 566
DriI GACNNNNNGTC 1 cut(s) 100
DseDI GACNNNNNNGTC 2 cut(s) 197, 566
EaeI YGGCCR 2 cut(s) 121, 667
EagI CGGCCG 1 cut(s) 667
Eam1105I GACNNNNNGTC 1 cut(s) 100
EciI GGCGGA 1 cut(s) 541
Ecl136II GAGCTC 1 cut(s) 487
EclXI CGGCCG 1 cut(s) 667
Eco24I GRGCYC 2 cut(s) 403, 489
Eco47I GGWCC 2 cut(s) 46, 349
Eco52I CGGCCG 1 cut(s) 667
Eco53kI GAGCTC 1 cut(s) 487
Eco88I CYCGRG 2 cut(s) 98, 344
Eco91I GGTNACC 1 cut(s) 586
EcoICRI GAGCTC 1 cut(s) 487
EcoO109I RGGNCCY 1 cut(s) 349
EcoO65I GGTNACC 1 cut(s) 586
EcoRII CCWGG 1 cut(s) 299
EcoT38I GRGCYC 2 cut(s) 403, 489
Esp3I CGTCTC 1 cut(s) 229
FaeI CATG 3 cut(s) 46, 214, 605
FaiI YATR 3 cut(s) 44, 212, 603
FaqI GGGAC 3 cut(s) 58, 258, 652
FatI CATG 3 cut(s) 42, 210, 601
FauI CCCGC 4 cut(s) 224, 251, 374, 390
FbaI TGATCA 1 cut(s) 135
FblI GTMKAC 3 cut(s) 81, 291, 381
Fnu4HI GCNGC 9 cut(s) 207, 297, 430, 438, 578, 581, 626, 670, 673
FokI GGATG 2 cut(s) 14, 139
FriOI GRGCYC 2 cut(s) 403, 489
Fsp4HI GCNGC 9 cut(s) 207, 297, 430, 438, 578, 581, 626, 670, 673
GlaI GCGC 4 cut(s) 220, 416, 455, 645
GluI GCNGC 9 cut(s) 207, 297, 430, 438, 578, 581, 626, 670, 673
GsaI CCCAGC 1 cut(s) 148
GsuI CTGGAG 1 cut(s) 458
HaeIII GGCC 6 cut(s) 123, 287, 305, 401, 467, 669
HapII CCGG 5 cut(s) 584, 636, 652, 666, 679
HgaI GACGC 3 cut(s) 302, 443, 527
HhaI GCGC 4 cut(s) 221, 417, 456, 646
Hin1I GRCGYC 5 cut(s) 231, 294, 378, 435, 519
Hin1II CATG 3 cut(s) 46, 214, 605
Hin6I GCGC 4 cut(s) 219, 415, 454, 644
HinP1I GCGC 4 cut(s) 219, 415, 454, 644
HincII GTYRAC 3 cut(s) 82, 292, 382
HindII GTYRAC 3 cut(s) 82, 292, 382
HindIII AAGCTT 1 cut(s) 506
HinfI GANTC 3 cut(s) 101, 323, 564
HpaII CCGG 5 cut(s) 584, 636, 652, 666, 679
HphI GGTGA 2 cut(s) 526, 580
Hpy166II GTNNAC 3 cut(s) 82, 292, 382
Hpy188I TCNGA 5 cut(s) 9, 94, 190, 229, 376
Hpy188III TCNNGA 1 cut(s) 275
Hpy8I GTNNAC 3 cut(s) 82, 292, 382
HpyAV CCTTC 1 cut(s) 439
HpyCH4III ACNGT 2 cut(s) 61, 272
HpyCH4IV ACGT 3 cut(s) 39, 231, 378
HpyCH4V TGCA 2 cut(s) 462, 625
HpyF10VI GCNNNNNNNGC 6 cut(s) 293, 302, 311, 407, 484, 681
HpyF3I CTNAG 1 cut(s) 157
HpySE526I ACGT 3 cut(s) 39, 231, 378
Hsp92I GRCGYC 5 cut(s) 231, 294, 378, 435, 519
Hsp92II CATG 3 cut(s) 46, 214, 605
HspAI GCGC 4 cut(s) 219, 415, 454, 644
Ksp22I TGATCA 1 cut(s) 135
Kzo9I GATC 4 cut(s) 4, 65, 135, 654
LmnI GCTCC 4 cut(s) 251, 492, 554, 574
Lsp1109I GCAGC 1 cut(s) 637
LweI GCATC 1 cut(s) 165
MaeII ACGT 3 cut(s) 39, 231, 378
MaeIII GTNAC 1 cut(s) 586
MalI GATC 4 cut(s) 6, 67, 137, 656
MbiI CCGCTC 2 cut(s) 246, 329
MboI GATC 4 cut(s) 4, 65, 135, 654
MflI RGATCY 2 cut(s) 4, 65
MhlI GDGCHC 2 cut(s) 403, 489
MlsI TGGCCA 1 cut(s) 123
MluNI TGGCCA 1 cut(s) 123
MlyI GAGTC 2 cut(s) 110, 332
MmeI TCCRAC 5 cut(s) 42, 117, 213, 252, 399
Mox20I TGGCCA 1 cut(s) 123
MscI TGGCCA 1 cut(s) 123
Msp20I TGGCCA 1 cut(s) 123
MspI CCGG 5 cut(s) 584, 636, 652, 666, 679
MspR9I CCNGG 2 cut(s) 301, 637
Mva1269I GAATGC 1 cut(s) 618
MvaI CCWGG 1 cut(s) 301
MvnI CGCG 4 cut(s) 219, 417, 432, 456
MwoI GCNNNNNNNGC 6 cut(s) 293, 302, 311, 407, 484, 681
NciI CCSGG 1 cut(s) 637
NdeII GATC 4 cut(s) 4, 65, 135, 654
NlaIII CATG 3 cut(s) 46, 214, 605
NlaIV GGNNCC 4 cut(s) 6, 67, 401, 576
NmeAIII GCCGAG 5 cut(s) 243, 436, 466, 547, 580
NmuCI GTSAC 1 cut(s) 586
PaeR7I CTCGAG 2 cut(s) 98, 344
PcsI WCGNNNNNNNCGW 7 cut(s) 90, 264, 288, 318, 351, 414, 567
PctI GAATGC 1 cut(s) 618
PfeI GAWTC 1 cut(s) 564
PflFI GACNNNGTC 2 cut(s) 353, 596
PfoI TCCNGGA 1 cut(s) 635
PkrI GCNGC 9 cut(s) 208, 298, 431, 439, 579, 582, 627, 671, 674
PleI GAGTC 2 cut(s) 109, 331
PpsI GAGTC 2 cut(s) 109, 331
PpuMI RGGWCCY 1 cut(s) 349
Psp124BI GAGCTC 1 cut(s) 489
Psp5II RGGWCCY 1 cut(s) 349
Psp6I CCWGG 1 cut(s) 299
PspEI GGTNACC 1 cut(s) 586
PspFI CCCAGC 1 cut(s) 144
PspGI CCWGG 1 cut(s) 299
PspN4I GGNNCC 4 cut(s) 6, 67, 401, 576
PspOMI GGGCCC 1 cut(s) 399
PspPI GGNCC 5 cut(s) 46, 303, 349, 399, 400
PspPPI RGGWCCY 1 cut(s) 349
PspXI VCTCGAGB 2 cut(s) 98, 344
PstI CTGCAG 1 cut(s) 627
PsuI RGATCY 2 cut(s) 4, 65
PsyI GACNNNGTC 2 cut(s) 353, 596
SacI GAGCTC 1 cut(s) 489
SalI GTCGAC 3 cut(s) 80, 290, 380
SatI GCNGC 9 cut(s) 207, 297, 430, 438, 578, 581, 626, 670, 673
Sau3AI GATC 4 cut(s) 4, 65, 135, 654
Sau96I GGNCC 5 cut(s) 46, 303, 349, 399, 400
SchI GAGTC 2 cut(s) 110, 332
ScrFI CCNGG 2 cut(s) 301, 637
SduI GDGCHC 2 cut(s) 403, 489
SfaNI GCATC 1 cut(s) 165
SfcI CTRYAG 1 cut(s) 623
Sfr274I CTCGAG 2 cut(s) 98, 344
SgrDI CGTCGACG 2 cut(s) 80, 290
SinI GGWCC 2 cut(s) 46, 349
SlaI CTCGAG 2 cut(s) 98, 344
SmlI CTYRAG 3 cut(s) 98, 344, 512
SmoI CTYRAG 3 cut(s) 98, 344, 512
SstI GAGCTC 1 cut(s) 489
StyD4I CCNGG 2 cut(s) 299, 635
TaaI ACNGT 2 cut(s) 61, 272
TaiI ACGT 3 cut(s) 42, 234, 381
TauI GCSGC 8 cut(s) 209, 299, 432, 440, 580, 583, 672, 675
TfiI GAWTC 1 cut(s) 564
TscAI CASTG 1 cut(s) 398
TseFI GTSAC 1 cut(s) 586
TseI GCWGC 1 cut(s) 625
Tsp45I GTSAC 1 cut(s) 586
TspGWI ACGGA 2 cut(s) 238, 576
TspRI CASTG 1 cut(s) 398
Tth111I GACNNNGTC 2 cut(s) 353, 596
VpaK11BI GGWCC 2 cut(s) 46, 349
XhoI CTCGAG 2 cut(s) 98, 344
XmiI GTMKAC 3 cut(s) 81, 291, 381
ZraI GACGTC 2 cut(s) 232, 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.